BLASTX nr result
ID: Cocculus22_contig00022340
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus22_contig00022340
(503 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002515074.1| pyruvate dehydrogenase, putative [Ricinus co... 63 5e-08
ref|XP_006491368.1| PREDICTED: pyruvate dehydrogenase E1 compone... 62 8e-08
ref|XP_006444730.1| hypothetical protein CICLE_v10020210mg [Citr... 62 8e-08
ref|XP_002301442.2| hypothetical protein POPTR_0002s18020g [Popu... 62 1e-07
ref|XP_004140530.1| PREDICTED: pyruvate dehydrogenase E1 compone... 60 2e-07
ref|XP_006491369.1| PREDICTED: pyruvate dehydrogenase E1 compone... 60 4e-07
ref|XP_006444729.1| hypothetical protein CICLE_v10020210mg [Citr... 60 4e-07
ref|XP_002267676.1| PREDICTED: pyruvate dehydrogenase E1 compone... 57 3e-06
>ref|XP_002515074.1| pyruvate dehydrogenase, putative [Ricinus communis]
gi|223545554|gb|EEF47058.1| pyruvate dehydrogenase,
putative [Ricinus communis]
Length = 433
Score = 62.8 bits (151), Expect = 5e-08
Identities = 36/81 (44%), Positives = 53/81 (65%), Gaps = 2/81 (2%)
Frame = -1
Query: 239 MASTFSSIRIIQPLAFASNTARSPEKPLFDPLRPITTTPFLGSTHKIRLNS--QTFQATR 66
MA+ FS+ +IQPL + + + +PLFDPL+ TT+ F+GST K+R ++ + +
Sbjct: 1 MATAFSATHLIQPLPVDNTRSYNKHQPLFDPLK--TTSSFIGSTSKLRFSALPKLNHVSS 58
Query: 65 LRPSTIVAVSDVVKGKKLKSS 3
R S IVAVS+ VK KKLKS+
Sbjct: 59 FRRSAIVAVSEAVKEKKLKST 79
>ref|XP_006491368.1| PREDICTED: pyruvate dehydrogenase E1 component subunit alpha-3,
chloroplastic-like isoform X1 [Citrus sinensis]
Length = 434
Score = 62.0 bits (149), Expect = 8e-08
Identities = 39/80 (48%), Positives = 52/80 (65%), Gaps = 2/80 (2%)
Frame = -1
Query: 239 MASTFSSIRIIQPLAFASN-TARSPEKPLFDPLRPITTTPFLGSTHKIRLNS-QTFQATR 66
MA+ +SS + +QPL+ S RS + LFDPL+ T T FLGST K+R+NS + Q
Sbjct: 1 MATAYSSAKFVQPLSLNSTINGRSRDNSLFDPLK--TGTSFLGSTRKLRVNSVHSNQGNV 58
Query: 65 LRPSTIVAVSDVVKGKKLKS 6
R +VAVS+VVK KK+KS
Sbjct: 59 RRRLPVVAVSEVVKEKKVKS 78
>ref|XP_006444730.1| hypothetical protein CICLE_v10020210mg [Citrus clementina]
gi|557546992|gb|ESR57970.1| hypothetical protein
CICLE_v10020210mg [Citrus clementina]
Length = 434
Score = 62.0 bits (149), Expect = 8e-08
Identities = 39/80 (48%), Positives = 52/80 (65%), Gaps = 2/80 (2%)
Frame = -1
Query: 239 MASTFSSIRIIQPLAFASN-TARSPEKPLFDPLRPITTTPFLGSTHKIRLNS-QTFQATR 66
MA+ +SS + +QPL+ S RS + LFDPL+ T T FLGST K+R+NS + Q
Sbjct: 1 MATAYSSAKFVQPLSLNSTINGRSRDNSLFDPLK--TGTSFLGSTRKLRVNSVHSNQGNV 58
Query: 65 LRPSTIVAVSDVVKGKKLKS 6
R +VAVS+VVK KK+KS
Sbjct: 59 RRRLPVVAVSEVVKEKKVKS 78
>ref|XP_002301442.2| hypothetical protein POPTR_0002s18020g [Populus trichocarpa]
gi|118486324|gb|ABK95003.1| unknown [Populus
trichocarpa] gi|550345263|gb|EEE80715.2| hypothetical
protein POPTR_0002s18020g [Populus trichocarpa]
Length = 442
Score = 61.6 bits (148), Expect = 1e-07
Identities = 40/84 (47%), Positives = 53/84 (63%), Gaps = 6/84 (7%)
Frame = -1
Query: 236 ASTFSSIRIIQPLAFASNTARSPEK--PLFDPLRPI-TTTPFLGSTHKIRLNSQT---FQ 75
AS FS+ + QP + T+RS EK FDPLR +++ FLGST K+RL+S +
Sbjct: 4 ASAFSATKFTQPFSLNGTTSRSHEKHQSFFDPLRTAPSSSSFLGSTRKLRLSSASKSKLV 63
Query: 74 ATRLRPSTIVAVSDVVKGKKLKSS 3
A R S +VAVSDVVK KK+KS+
Sbjct: 64 ANPNRRSAVVAVSDVVKEKKVKST 87
>ref|XP_004140530.1| PREDICTED: pyruvate dehydrogenase E1 component subunit alpha-like
[Cucumis sativus]
Length = 428
Score = 60.5 bits (145), Expect = 2e-07
Identities = 41/75 (54%), Positives = 51/75 (68%), Gaps = 1/75 (1%)
Frame = -1
Query: 224 SSIRIIQPLAFASNTARSPEKPL-FDPLRPITTTPFLGSTHKIRLNSQTFQATRLRPSTI 48
SS++I+QPL N+ RS +KPL FDP R +T+ FLGS + RL S + TR R S +
Sbjct: 5 SSLKILQPLPL--NSTRSNDKPLLFDPFR--STSKFLGS--RFRLPSLSKSNTRCRSSPV 58
Query: 47 VAVSDVVKGKKLKSS 3
VAVSDVVK KKLK S
Sbjct: 59 VAVSDVVKEKKLKPS 73
>ref|XP_006491369.1| PREDICTED: pyruvate dehydrogenase E1 component subunit alpha-3,
chloroplastic-like isoform X2 [Citrus sinensis]
Length = 427
Score = 59.7 bits (143), Expect = 4e-07
Identities = 38/78 (48%), Positives = 50/78 (64%), Gaps = 2/78 (2%)
Frame = -1
Query: 239 MASTFSSIRIIQPLAFASN-TARSPEKPLFDPLRPITTTPFLGSTHKIRLNS-QTFQATR 66
MA+ +SS + +QPL+ S RS + LFDPL+ T T FLGST K+R+NS + Q
Sbjct: 1 MATAYSSAKFVQPLSLNSTINGRSRDNSLFDPLK--TGTSFLGSTRKLRVNSVHSNQGNV 58
Query: 65 LRPSTIVAVSDVVKGKKL 12
R +VAVS+VVK KKL
Sbjct: 59 RRRLPVVAVSEVVKEKKL 76
>ref|XP_006444729.1| hypothetical protein CICLE_v10020210mg [Citrus clementina]
gi|557546991|gb|ESR57969.1| hypothetical protein
CICLE_v10020210mg [Citrus clementina]
Length = 427
Score = 59.7 bits (143), Expect = 4e-07
Identities = 38/78 (48%), Positives = 50/78 (64%), Gaps = 2/78 (2%)
Frame = -1
Query: 239 MASTFSSIRIIQPLAFASN-TARSPEKPLFDPLRPITTTPFLGSTHKIRLNS-QTFQATR 66
MA+ +SS + +QPL+ S RS + LFDPL+ T T FLGST K+R+NS + Q
Sbjct: 1 MATAYSSAKFVQPLSLNSTINGRSRDNSLFDPLK--TGTSFLGSTRKLRVNSVHSNQGNV 58
Query: 65 LRPSTIVAVSDVVKGKKL 12
R +VAVS+VVK KKL
Sbjct: 59 RRRLPVVAVSEVVKEKKL 76
>ref|XP_002267676.1| PREDICTED: pyruvate dehydrogenase E1 component subunit alpha [Vitis
vinifera] gi|296089009|emb|CBI38712.3| unnamed protein
product [Vitis vinifera]
Length = 433
Score = 57.0 bits (136), Expect = 3e-06
Identities = 44/85 (51%), Positives = 53/85 (62%), Gaps = 6/85 (7%)
Frame = -1
Query: 239 MASTFSSIRIIQPLAFASNTARSPEKP--LFDPLRPITTTPFLGSTHKIRLNSQTFQATR 66
MAS+F S IIQPL RSP+KP LFD L+ TT+ FLGST K+R S +
Sbjct: 1 MASSFLSSGIIQPLPL-----RSPDKPQTLFDHLK--TTSTFLGSTSKLR--SVSLSKPN 51
Query: 65 L----RPSTIVAVSDVVKGKKLKSS 3
L R ST+VAVSDV+K KK KS+
Sbjct: 52 LPNPHRRSTVVAVSDVLKEKKTKSA 76