BLASTX nr result
ID: Cocculus22_contig00022199
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus22_contig00022199
(423 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004497811.1| PREDICTED: genome polyprotein-like [Cicer ar... 94 2e-17
ref|XP_004511185.1| PREDICTED: genome polyprotein-like [Cicer ar... 91 1e-16
ref|XP_004490917.1| PREDICTED: genome polyprotein-like [Cicer ar... 91 2e-16
ref|XP_004500104.1| PREDICTED: genome polyprotein-like [Cicer ar... 90 3e-16
ref|XP_004500032.1| PREDICTED: genome polyprotein-like [Cicer ar... 88 1e-15
ref|XP_004509900.1| PREDICTED: genome polyprotein-like [Cicer ar... 85 9e-15
ref|XP_004499727.1| PREDICTED: genome polyprotein-like [Cicer ar... 82 6e-14
gb|AHN13810.1| reverse transcriptase [Aristotelia chilensis vein... 82 1e-13
ref|XP_004509642.1| PREDICTED: genome polyprotein-like [Cicer ar... 80 4e-13
ref|XP_004515135.1| PREDICTED: genome polyprotein-like [Cicer ar... 79 8e-13
gb|AAO67369.1| polyprotein 1 [Petunia vein clearing virus] 79 8e-13
sp|Q6XKE6.1|POLG_PVCV2 RecName: Full=Genome polyprotein; Contain... 79 8e-13
ref|NP_127504.1| ORF I polyprotein [Petunia vein clearing virus]... 79 8e-13
gb|AHC13200.1| polyprotein [Citrus endogenous pararetrovirus] 77 2e-12
gb|AHC13197.1| polyprotein [Citrus endogenous pararetrovirus] 77 2e-12
ref|YP_008992013.1| polyprotein [Citrus endogenous pararetroviru... 77 2e-12
gb|EXB39830.1| hypothetical protein L484_001682 [Morus notabilis] 75 7e-12
ref|XP_006393720.1| hypothetical protein EUTSA_v10012231mg, part... 71 2e-10
ref|XP_004499473.1| PREDICTED: genome polyprotein-like [Cicer ar... 64 3e-08
ref|YP_008992015.1| RNase_H [Citrus endogenous pararetrovirus] 62 6e-08
>ref|XP_004497811.1| PREDICTED: genome polyprotein-like [Cicer arietinum]
Length = 1951
Score = 94.0 bits (232), Expect = 2e-17
Identities = 48/74 (64%), Positives = 52/74 (70%), Gaps = 1/74 (1%)
Frame = -1
Query: 219 HT-AIQTLKTICQDPPPLTIPTTGK*ILQTDASDHCWSAVLLEEHDNTTYYCGHESGFFK 43
HT AI+TLK I Q PP L IP GK ILQTDASDH W AVL+EE + YYCGH SG FK
Sbjct: 1613 HTKAIKTLKRISQTPPALKIPGNGKRILQTDASDHYWGAVLIEEINGVKYYCGHASGQFK 1672
Query: 42 PSELHYRTTIKELL 1
+E HY TT KE L
Sbjct: 1673 EAEKHYHTTYKEAL 1686
>ref|XP_004511185.1| PREDICTED: genome polyprotein-like [Cicer arietinum]
Length = 803
Score = 91.3 bits (225), Expect = 1e-16
Identities = 45/74 (60%), Positives = 51/74 (68%), Gaps = 1/74 (1%)
Frame = -1
Query: 219 HT-AIQTLKTICQDPPPLTIPTTGK*ILQTDASDHCWSAVLLEEHDNTTYYCGHESGFFK 43
HT A++TLK I Q PP L IP GK ILQTDA DH W A+L+EE D +YCGH SG FK
Sbjct: 689 HTEAVKTLKRIAQTPPALKIPGNGKRILQTDAIDHYWGAILIEEIDGVKHYCGHASGQFK 748
Query: 42 PSELHYRTTIKELL 1
+E HY TT KE L
Sbjct: 749 EAEKHYHTTYKEAL 762
>ref|XP_004490917.1| PREDICTED: genome polyprotein-like [Cicer arietinum]
Length = 279
Score = 90.9 bits (224), Expect = 2e-16
Identities = 46/74 (62%), Positives = 51/74 (68%), Gaps = 1/74 (1%)
Frame = -1
Query: 219 HT-AIQTLKTICQDPPPLTIPTTGK*ILQTDASDHCWSAVLLEEHDNTTYYCGHESGFFK 43
HT A++TLK I Q PP L IP K ILQTDASDH W AVL+EE + YYCGH SG FK
Sbjct: 179 HTEAVKTLKRIAQTPPALKIPGNEKRILQTDASDHYWGAVLIEEINGVKYYCGHASGQFK 238
Query: 42 PSELHYRTTIKELL 1
+E HY TT KE L
Sbjct: 239 EAEKHYHTTYKEAL 252
>ref|XP_004500104.1| PREDICTED: genome polyprotein-like [Cicer arietinum]
Length = 1170
Score = 90.1 bits (222), Expect = 3e-16
Identities = 45/74 (60%), Positives = 51/74 (68%), Gaps = 1/74 (1%)
Frame = -1
Query: 219 HT-AIQTLKTICQDPPPLTIPTTGK*ILQTDASDHCWSAVLLEEHDNTTYYCGHESGFFK 43
HT A++ LK I Q PP L IP GK ILQTDASDH W AVL+EE + +YCGH SG FK
Sbjct: 946 HTEAVKALKRIAQTPPALKIPGNGKRILQTDASDHYWGAVLIEEINGVKHYCGHASGQFK 1005
Query: 42 PSELHYRTTIKELL 1
+E HY TT KE L
Sbjct: 1006 EAEKHYHTTYKEAL 1019
>ref|XP_004500032.1| PREDICTED: genome polyprotein-like [Cicer arietinum]
Length = 313
Score = 87.8 bits (216), Expect = 1e-15
Identities = 43/74 (58%), Positives = 50/74 (67%), Gaps = 1/74 (1%)
Frame = -1
Query: 219 HT-AIQTLKTICQDPPPLTIPTTGK*ILQTDASDHCWSAVLLEEHDNTTYYCGHESGFFK 43
HT ++T+K I Q PP L IP GK ILQTD SDH W AVL+EE + +YCGH SG FK
Sbjct: 184 HTEVVKTVKRIAQTPPALKIPGNGKRILQTDVSDHYWGAVLIEEINGVKHYCGHASGQFK 243
Query: 42 PSELHYRTTIKELL 1
+E HY TT KE L
Sbjct: 244 EAEKHYHTTYKEAL 257
>ref|XP_004509900.1| PREDICTED: genome polyprotein-like [Cicer arietinum]
Length = 181
Score = 85.1 bits (209), Expect = 9e-15
Identities = 42/74 (56%), Positives = 48/74 (64%), Gaps = 1/74 (1%)
Frame = -1
Query: 219 HT-AIQTLKTICQDPPPLTIPTTGK*ILQTDASDHCWSAVLLEEHDNTTYYCGHESGFFK 43
HT A++ LK I PP L IP GK ILQTDASDH W +L+EE +YCGH SG FK
Sbjct: 88 HTEAVKALKRIAHTPPALKIPGNGKRILQTDASDHYWGTILIEEIKGIKHYCGHASGQFK 147
Query: 42 PSELHYRTTIKELL 1
+E HY TT KE L
Sbjct: 148 EAEKHYHTTYKEAL 161
>ref|XP_004499727.1| PREDICTED: genome polyprotein-like [Cicer arietinum]
Length = 1645
Score = 82.4 bits (202), Expect = 6e-14
Identities = 39/62 (62%), Positives = 44/62 (70%)
Frame = -1
Query: 213 AIQTLKTICQDPPPLTIPTTGK*ILQTDASDHCWSAVLLEEHDNTTYYCGHESGFFKPSE 34
A++TLK I Q PP L IP GK ILQTDASDH W AVL+EE + YYCGH SG FK +E
Sbjct: 1561 AVKTLKRIAQTPPALKIPGNGKRILQTDASDHYWGAVLIEEINGVKYYCGHASGQFKEAE 1620
Query: 33 LH 28
H
Sbjct: 1621 KH 1622
>gb|AHN13810.1| reverse transcriptase [Aristotelia chilensis vein clearing virus]
Length = 758
Score = 81.6 bits (200), Expect = 1e-13
Identities = 38/71 (53%), Positives = 49/71 (69%)
Frame = -1
Query: 213 AIQTLKTICQDPPPLTIPTTGK*ILQTDASDHCWSAVLLEEHDNTTYYCGHESGFFKPSE 34
A++ +K + Q+ P IP+ GK ILQTDASD W A+LLEE DN CG++SG FK SE
Sbjct: 269 AVRKIKALTQNLPAQQIPSNGKRILQTDASDEYWGAILLEERDNHRQICGYKSGHFKDSE 328
Query: 33 LHYRTTIKELL 1
HY +T KE+L
Sbjct: 329 KHYHSTFKEIL 339
>ref|XP_004509642.1| PREDICTED: genome polyprotein-like [Cicer arietinum]
Length = 168
Score = 79.7 bits (195), Expect = 4e-13
Identities = 41/74 (55%), Positives = 47/74 (63%), Gaps = 1/74 (1%)
Frame = -1
Query: 219 HT-AIQTLKTICQDPPPLTIPTTGK*ILQTDASDHCWSAVLLEEHDNTTYYCGHESGFFK 43
HT A++ LK I Q PP L IP GK LQTD SDH AVL+EE + +YCGH G FK
Sbjct: 88 HTDAVKALKRIAQTPPALKIPRNGKRTLQTDVSDHYRGAVLIEEINGVKHYCGHACGQFK 147
Query: 42 PSELHYRTTIKELL 1
+E HY TT KE L
Sbjct: 148 EAEKHYHTTYKEAL 161
>ref|XP_004515135.1| PREDICTED: genome polyprotein-like [Cicer arietinum]
Length = 159
Score = 78.6 bits (192), Expect = 8e-13
Identities = 38/71 (53%), Positives = 47/71 (66%)
Frame = -1
Query: 213 AIQTLKTICQDPPPLTIPTTGK*ILQTDASDHCWSAVLLEEHDNTTYYCGHESGFFKPSE 34
A + LK I Q PP L IP GK ILQT+ASDH W A+L+E+ + +Y GH SG FK +E
Sbjct: 73 AFKALKRIAQTPPALKIPGNGKRILQTNASDHYWGALLIEDINGVKHYYGHASGQFKEAE 132
Query: 33 LHYRTTIKELL 1
HY T+ KE L
Sbjct: 133 KHYHTSYKEAL 143
>gb|AAO67369.1| polyprotein 1 [Petunia vein clearing virus]
Length = 1886
Score = 78.6 bits (192), Expect = 8e-13
Identities = 40/71 (56%), Positives = 47/71 (66%)
Frame = -1
Query: 213 AIQTLKTICQDPPPLTIPTTGK*ILQTDASDHCWSAVLLEEHDNTTYYCGHESGFFKPSE 34
A++ LK + Q L IP+ GK ILQTDASD WSAVLLEEH+ CG SG FK SE
Sbjct: 1662 AVKQLKQLAQQVKSLHIPSEGKKILQTDASDQYWSAVLLEEHNGKRKICGFASGKFKVSE 1721
Query: 33 LHYRTTIKELL 1
HY +T KE+L
Sbjct: 1722 QHYHSTFKEIL 1732
>sp|Q6XKE6.1|POLG_PVCV2 RecName: Full=Genome polyprotein; Contains: RecName: Full=Movement
protein; Short=MP; Contains: RecName: Full=Capsid
protein; Short=CP; Contains: RecName: Full=Aspartic
protease; Short=PR; Contains: RecName: Full=Reverse
transcriptase; Short=RT gi|34328896|gb|AAO67368.1|
polyprotein 1 [Petunia vein clearing virus]
Length = 2180
Score = 78.6 bits (192), Expect = 8e-13
Identities = 40/71 (56%), Positives = 47/71 (66%)
Frame = -1
Query: 213 AIQTLKTICQDPPPLTIPTTGK*ILQTDASDHCWSAVLLEEHDNTTYYCGHESGFFKPSE 34
A++ LK + Q L IP+ GK ILQTDASD WSAVLLEEH+ CG SG FK SE
Sbjct: 1662 AVKQLKQLAQQVKSLHIPSEGKKILQTDASDQYWSAVLLEEHNGKRKICGFASGKFKVSE 1721
Query: 33 LHYRTTIKELL 1
HY +T KE+L
Sbjct: 1722 QHYHSTFKEIL 1732
>ref|NP_127504.1| ORF I polyprotein [Petunia vein clearing virus]
gi|82061579|sp|Q91DM0.1|POLG_PVCV1 RecName: Full=Genome
polyprotein; Contains: RecName: Full=Movement protein;
Short=MP; Contains: RecName: Full=Capsid protein;
Short=CP; Contains: RecName: Full=Aspartic protease;
Short=PR; Contains: RecName: Full=Reverse transcriptase;
Short=RT gi|14574598|gb|AAK68664.1| ORF I polyprotein
[petunia vein clearing virus]
Length = 2179
Score = 78.6 bits (192), Expect = 8e-13
Identities = 40/71 (56%), Positives = 47/71 (66%)
Frame = -1
Query: 213 AIQTLKTICQDPPPLTIPTTGK*ILQTDASDHCWSAVLLEEHDNTTYYCGHESGFFKPSE 34
A++ LK + Q L IP+ GK ILQTDASD WSAVLLEEH+ CG SG FK SE
Sbjct: 1661 AVKQLKQLAQQVKSLHIPSEGKKILQTDASDQYWSAVLLEEHNGKRKICGFASGKFKVSE 1720
Query: 33 LHYRTTIKELL 1
HY +T KE+L
Sbjct: 1721 QHYHSTFKEIL 1731
>gb|AHC13200.1| polyprotein [Citrus endogenous pararetrovirus]
Length = 1701
Score = 77.4 bits (189), Expect = 2e-12
Identities = 41/74 (55%), Positives = 48/74 (64%), Gaps = 1/74 (1%)
Frame = -1
Query: 219 HT-AIQTLKTICQDPPPLTIPTTGK*ILQTDASDHCWSAVLLEEHDNTTYYCGHESGFFK 43
HT A+ TLK I Q+PPP K ILQTDASD WSAVLLEEH+ ++C H SG FK
Sbjct: 1501 HTNAVTTLKKIAQNPPPKHQTHPTKKILQTDASDQYWSAVLLEEHNGKRHFCAHASGQFK 1560
Query: 42 PSELHYRTTIKELL 1
SE +Y KE+L
Sbjct: 1561 HSEKNYHVIYKEIL 1574
>gb|AHC13197.1| polyprotein [Citrus endogenous pararetrovirus]
Length = 1799
Score = 77.4 bits (189), Expect = 2e-12
Identities = 41/74 (55%), Positives = 48/74 (64%), Gaps = 1/74 (1%)
Frame = -1
Query: 219 HT-AIQTLKTICQDPPPLTIPTTGK*ILQTDASDHCWSAVLLEEHDNTTYYCGHESGFFK 43
HT A+ TLK I Q+PPP K ILQTDASD WSAVLLEEH+ ++C H SG FK
Sbjct: 1599 HTNAVTTLKKIAQNPPPKHQTHPTKKILQTDASDQYWSAVLLEEHNGKRHFCAHASGQFK 1658
Query: 42 PSELHYRTTIKELL 1
SE +Y KE+L
Sbjct: 1659 HSEKNYHVIYKEIL 1672
>ref|YP_008992013.1| polyprotein [Citrus endogenous pararetrovirus]
gi|565672276|gb|AHC13194.1| polyprotein [Citrus
endogenous pararetrovirus]
Length = 1812
Score = 77.4 bits (189), Expect = 2e-12
Identities = 41/74 (55%), Positives = 48/74 (64%), Gaps = 1/74 (1%)
Frame = -1
Query: 219 HT-AIQTLKTICQDPPPLTIPTTGK*ILQTDASDHCWSAVLLEEHDNTTYYCGHESGFFK 43
HT A+ TLK I Q+PPP K ILQTDASD WSAVLLEEH+ ++C H SG FK
Sbjct: 1612 HTNAVTTLKKIAQNPPPKHQTHPTKKILQTDASDQYWSAVLLEEHNGKRHFCAHASGQFK 1671
Query: 42 PSELHYRTTIKELL 1
SE +Y KE+L
Sbjct: 1672 HSEKNYHVIYKEIL 1685
>gb|EXB39830.1| hypothetical protein L484_001682 [Morus notabilis]
Length = 334
Score = 75.5 bits (184), Expect = 7e-12
Identities = 33/59 (55%), Positives = 42/59 (71%)
Frame = -1
Query: 213 AIQTLKTICQDPPPLTIPTTGK*ILQTDASDHCWSAVLLEEHDNTTYYCGHESGFFKPS 37
A+ LK + Q PPPL IP+T K +L+TDASDH W A+L+EE + +YCGH SG FK S
Sbjct: 16 AVIALKKVAQSPPPLKIPSTWKRVLETDASDHYWGAILIEEEKDKKHYCGHASGQFKES 74
>ref|XP_006393720.1| hypothetical protein EUTSA_v10012231mg, partial [Eutrema salsugineum]
gi|557090298|gb|ESQ31006.1| hypothetical protein
EUTSA_v10012231mg, partial [Eutrema salsugineum]
Length = 1904
Score = 70.9 bits (172), Expect = 2e-10
Identities = 38/72 (52%), Positives = 48/72 (66%), Gaps = 1/72 (1%)
Frame = -1
Query: 213 AIQTLKTICQDPPPLTIPTTGK*ILQTDASDHCWSAVLLEEHD-NTTYYCGHESGFFKPS 37
A++ LK I + P L IP+ GK ILQTDASD W AVLLE+ + CG++SG FK S
Sbjct: 1508 AVKELKRISKTLPSLKIPSKGKRILQTDASDCYWGAVLLEKDEKGKRSICGYKSGVFKDS 1567
Query: 36 ELHYRTTIKELL 1
E HY +T KE+L
Sbjct: 1568 EKHYHSTYKEIL 1579
>ref|XP_004499473.1| PREDICTED: genome polyprotein-like [Cicer arietinum]
Length = 441
Score = 63.5 bits (153), Expect = 3e-08
Identities = 31/66 (46%), Positives = 41/66 (62%), Gaps = 1/66 (1%)
Frame = -1
Query: 219 HT-AIQTLKTICQDPPPLTIPTTGK*ILQTDASDHCWSAVLLEEHDNTTYYCGHESGFFK 43
HT ++ LK + Q P + I GK ILQT+ DH W A+L+EE + +YCGH SG FK
Sbjct: 360 HTKVVKALKKVAQIPLAMKILGNGKRILQTNVIDHYWGALLIEEINGVKHYCGHASGQFK 419
Query: 42 PSELHY 25
+E HY
Sbjct: 420 EAEKHY 425
>ref|YP_008992015.1| RNase_H [Citrus endogenous pararetrovirus]
Length = 124
Score = 62.4 bits (150), Expect = 6e-08
Identities = 29/48 (60%), Positives = 34/48 (70%)
Frame = -1
Query: 144 ILQTDASDHCWSAVLLEEHDNTTYYCGHESGFFKPSELHYRTTIKELL 1
ILQTDASD WSAVLLEEH+ ++C H SG FK SE +Y KE+L
Sbjct: 1 ILQTDASDQYWSAVLLEEHNGKRHFCAHASGQFKHSEKNYHVIYKEIL 48