BLASTX nr result
ID: Cocculus22_contig00022150
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus22_contig00022150
(298 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006476160.1| PREDICTED: putative pentatricopeptide repeat... 159 3e-37
ref|XP_007226824.1| hypothetical protein PRUPE_ppa017604mg [Prun... 159 5e-37
ref|XP_002309575.2| pentatricopeptide repeat-containing family p... 155 4e-36
ref|XP_006367759.1| PREDICTED: putative pentatricopeptide repeat... 152 6e-35
ref|XP_004243019.1| PREDICTED: putative pentatricopeptide repeat... 152 6e-35
ref|XP_004292866.1| PREDICTED: putative pentatricopeptide repeat... 151 8e-35
ref|XP_002281549.1| PREDICTED: putative pentatricopeptide repeat... 150 2e-34
gb|EEC78291.1| hypothetical protein OsI_18005 [Oryza sativa Indi... 150 2e-34
emb|CAJ86042.1| H0723C07.12 [Oryza sativa Indica Group] 150 2e-34
ref|NP_001054327.1| Os04g0686500 [Oryza sativa Japonica Group] g... 150 2e-34
ref|XP_006653061.1| PREDICTED: putative pentatricopeptide repeat... 149 5e-34
ref|XP_006578209.1| PREDICTED: putative pentatricopeptide repeat... 147 2e-33
gb|EXC32783.1| hypothetical protein L484_019897 [Morus notabilis] 146 3e-33
ref|XP_004959988.1| PREDICTED: putative pentatricopeptide repeat... 146 3e-33
ref|XP_002885072.1| hypothetical protein ARALYDRAFT_318289 [Arab... 145 6e-33
ref|NP_188131.1| pentatricopeptide repeat-containing protein [Ar... 144 2e-32
dbj|BAB02568.1| unnamed protein product [Arabidopsis thaliana] 144 2e-32
ref|XP_007012023.1| Tetratricopeptide repeat (TPR)-like superfam... 143 3e-32
ref|XP_006297306.1| hypothetical protein CARUB_v10013320mg [Caps... 142 4e-32
ref|XP_006297305.1| hypothetical protein CARUB_v10013320mg [Caps... 142 4e-32
>ref|XP_006476160.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15130-like [Citrus sinensis]
Length = 694
Score = 159 bits (403), Expect = 3e-37
Identities = 69/98 (70%), Positives = 87/98 (88%)
Frame = +3
Query: 3 KLCIDNQIKPRVEHYACFVDLLSRAGRLEEAKNLIESMPLEPTVGIWQTLLGACGIHRDL 182
+LC D ++KPR+EHY+C VD L RAGRL+EAKNLIESMP++P++ IWQTLL AC +H DL
Sbjct: 443 RLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDL 502
Query: 183 EMGREVGKILLRLDGENPVNYVMLSNLYAEAGKWQECE 296
E+GREVG+ILLRLDG+NPVNYVM+SN++A+AG W ECE
Sbjct: 503 ELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECE 540
>ref|XP_007226824.1| hypothetical protein PRUPE_ppa017604mg [Prunus persica]
gi|462423760|gb|EMJ28023.1| hypothetical protein
PRUPE_ppa017604mg [Prunus persica]
Length = 686
Score = 159 bits (401), Expect = 5e-37
Identities = 74/98 (75%), Positives = 85/98 (86%)
Frame = +3
Query: 3 KLCIDNQIKPRVEHYACFVDLLSRAGRLEEAKNLIESMPLEPTVGIWQTLLGACGIHRDL 182
+LC D +IK VEHYAC VDLL RAGRL+EAKNLI+SMPL+P VGIWQTLL AC +H DL
Sbjct: 436 RLCHDRRIKRNVEHYACMVDLLGRAGRLKEAKNLIDSMPLKPNVGIWQTLLSACKVHGDL 495
Query: 183 EMGREVGKILLRLDGENPVNYVMLSNLYAEAGKWQECE 296
E+GREVG+ LLRLD +NPVNYVMLSN+YAEAG W+ECE
Sbjct: 496 EIGREVGETLLRLDCDNPVNYVMLSNIYAEAGYWKECE 533
>ref|XP_002309575.2| pentatricopeptide repeat-containing family protein [Populus
trichocarpa] gi|550337108|gb|EEE93098.2|
pentatricopeptide repeat-containing family protein
[Populus trichocarpa]
Length = 693
Score = 155 bits (393), Expect = 4e-36
Identities = 72/98 (73%), Positives = 84/98 (85%)
Frame = +3
Query: 3 KLCIDNQIKPRVEHYACFVDLLSRAGRLEEAKNLIESMPLEPTVGIWQTLLGACGIHRDL 182
+LC + IK RVEHYAC VDLL RAGRL+EAKNL++SMPLE VGIWQTLL AC +H DL
Sbjct: 443 RLCSYHGIKARVEHYACMVDLLGRAGRLKEAKNLVDSMPLEANVGIWQTLLSACRVHGDL 502
Query: 183 EMGREVGKILLRLDGENPVNYVMLSNLYAEAGKWQECE 296
E+G+EVG ILLRLD ENPVNYVM+SN+YA+AG W+ECE
Sbjct: 503 ELGKEVGGILLRLDSENPVNYVMMSNIYADAGYWKECE 540
>ref|XP_006367759.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15130-like isoform X1 [Solanum tuberosum]
Length = 693
Score = 152 bits (383), Expect = 6e-35
Identities = 67/98 (68%), Positives = 85/98 (86%)
Frame = +3
Query: 3 KLCIDNQIKPRVEHYACFVDLLSRAGRLEEAKNLIESMPLEPTVGIWQTLLGACGIHRDL 182
KLC N +KP VEHYAC VD+L RAGRL EAK +IE+MP++P VGIWQTLLGAC +H+++
Sbjct: 443 KLCNSNCLKPSVEHYACMVDILGRAGRLREAKVVIENMPVKPNVGIWQTLLGACRVHKNV 502
Query: 183 EMGREVGKILLRLDGENPVNYVMLSNLYAEAGKWQECE 296
E+GREVG+ILL+LDG NPVNYVM+SN++A+A W+ECE
Sbjct: 503 EIGREVGEILLKLDGNNPVNYVMMSNIFADARLWEECE 540
>ref|XP_004243019.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15130-like [Solanum lycopersicum]
Length = 693
Score = 152 bits (383), Expect = 6e-35
Identities = 67/98 (68%), Positives = 85/98 (86%)
Frame = +3
Query: 3 KLCIDNQIKPRVEHYACFVDLLSRAGRLEEAKNLIESMPLEPTVGIWQTLLGACGIHRDL 182
KLC N +KP VEHYAC VD+L RAGRL EAK +IE+MP++P VGIWQTLLGAC +H+++
Sbjct: 443 KLCNSNCLKPSVEHYACMVDILGRAGRLREAKVVIENMPVKPNVGIWQTLLGACRVHKNV 502
Query: 183 EMGREVGKILLRLDGENPVNYVMLSNLYAEAGKWQECE 296
E+GREVG+ILL+LDG NPVNYVM+SN++A+A W+ECE
Sbjct: 503 EIGREVGEILLKLDGNNPVNYVMMSNIFADARLWEECE 540
>ref|XP_004292866.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15130-like [Fragaria vesca subsp. vesca]
Length = 686
Score = 151 bits (382), Expect = 8e-35
Identities = 69/98 (70%), Positives = 85/98 (86%)
Frame = +3
Query: 3 KLCIDNQIKPRVEHYACFVDLLSRAGRLEEAKNLIESMPLEPTVGIWQTLLGACGIHRDL 182
+LC D +IK VEHYAC VDLL RAGR++EA+NLI+SM L+P +GIWQTLL AC +H ++
Sbjct: 436 RLCHDKRIKQTVEHYACMVDLLGRAGRVKEAENLIDSMLLKPNIGIWQTLLSACRVHGEV 495
Query: 183 EMGREVGKILLRLDGENPVNYVMLSNLYAEAGKWQECE 296
E+G EVG++LLRLDG+NPVNYVMLSNLYAEAG W+ECE
Sbjct: 496 EIGGEVGEMLLRLDGDNPVNYVMLSNLYAEAGYWKECE 533
>ref|XP_002281549.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15130 [Vitis vinifera] gi|296083673|emb|CBI23662.3|
unnamed protein product [Vitis vinifera]
Length = 685
Score = 150 bits (379), Expect = 2e-34
Identities = 66/98 (67%), Positives = 85/98 (86%)
Frame = +3
Query: 3 KLCIDNQIKPRVEHYACFVDLLSRAGRLEEAKNLIESMPLEPTVGIWQTLLGACGIHRDL 182
+LC ++Q+KP +EHYAC VD+L RAG+L+EAKNLIE+M L+P GIWQTLL AC +H +L
Sbjct: 435 RLCNNHQMKPNIEHYACMVDILGRAGQLKEAKNLIENMKLKPNEGIWQTLLSACRVHGNL 494
Query: 183 EMGREVGKILLRLDGENPVNYVMLSNLYAEAGKWQECE 296
E+GREVG+IL R+D +NPVNYVM+SN+YAEAG W+ECE
Sbjct: 495 EIGREVGEILFRMDTDNPVNYVMMSNIYAEAGYWKECE 532
>gb|EEC78291.1| hypothetical protein OsI_18005 [Oryza sativa Indica Group]
Length = 690
Score = 150 bits (378), Expect = 2e-34
Identities = 64/98 (65%), Positives = 83/98 (84%)
Frame = +3
Query: 3 KLCIDNQIKPRVEHYACFVDLLSRAGRLEEAKNLIESMPLEPTVGIWQTLLGACGIHRDL 182
++C D +++P+ EHYAC VDLL RAG L EAK LI SMP+EPTVG+WQTLL AC +H+D+
Sbjct: 434 RICQDRRMRPKAEHYACMVDLLGRAGELREAKELILSMPMEPTVGVWQTLLSACRVHKDV 493
Query: 183 EMGREVGKILLRLDGENPVNYVMLSNLYAEAGKWQECE 296
+GREVG +LL +DG+NPVNYVMLSN+ AEAG+W+EC+
Sbjct: 494 AVGREVGDVLLAVDGDNPVNYVMLSNILAEAGEWRECQ 531
>emb|CAJ86042.1| H0723C07.12 [Oryza sativa Indica Group]
Length = 886
Score = 150 bits (378), Expect = 2e-34
Identities = 64/98 (65%), Positives = 83/98 (84%)
Frame = +3
Query: 3 KLCIDNQIKPRVEHYACFVDLLSRAGRLEEAKNLIESMPLEPTVGIWQTLLGACGIHRDL 182
++C D +++P+ EHYAC VDLL RAG L EAK LI SMP+EPTVG+WQTLL AC +H+D+
Sbjct: 630 RICQDRRMRPKAEHYACMVDLLGRAGELREAKELILSMPMEPTVGVWQTLLSACRVHKDV 689
Query: 183 EMGREVGKILLRLDGENPVNYVMLSNLYAEAGKWQECE 296
+GREVG +LL +DG+NPVNYVMLSN+ AEAG+W+EC+
Sbjct: 690 AVGREVGDVLLAVDGDNPVNYVMLSNILAEAGEWRECQ 727
>ref|NP_001054327.1| Os04g0686500 [Oryza sativa Japonica Group]
gi|38345824|emb|CAE01858.2| OSJNBa0070M12.7 [Oryza
sativa Japonica Group] gi|113565898|dbj|BAF16241.1|
Os04g0686500 [Oryza sativa Japonica Group]
gi|215766744|dbj|BAG98972.1| unnamed protein product
[Oryza sativa Japonica Group]
gi|222629815|gb|EEE61947.1| hypothetical protein
OsJ_16704 [Oryza sativa Japonica Group]
Length = 690
Score = 150 bits (378), Expect = 2e-34
Identities = 64/98 (65%), Positives = 83/98 (84%)
Frame = +3
Query: 3 KLCIDNQIKPRVEHYACFVDLLSRAGRLEEAKNLIESMPLEPTVGIWQTLLGACGIHRDL 182
++C D +++P+ EHYAC VDLL RAG L EAK LI SMP+EPTVG+WQTLL AC +H+D+
Sbjct: 434 RICQDRRMRPKAEHYACMVDLLGRAGELREAKELILSMPMEPTVGVWQTLLSACRVHKDV 493
Query: 183 EMGREVGKILLRLDGENPVNYVMLSNLYAEAGKWQECE 296
+GREVG +LL +DG+NPVNYVMLSN+ AEAG+W+EC+
Sbjct: 494 AVGREVGDVLLAVDGDNPVNYVMLSNILAEAGEWRECQ 531
>ref|XP_006653061.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15130-like [Oryza brachyantha]
Length = 688
Score = 149 bits (375), Expect = 5e-34
Identities = 63/98 (64%), Positives = 83/98 (84%)
Frame = +3
Query: 3 KLCIDNQIKPRVEHYACFVDLLSRAGRLEEAKNLIESMPLEPTVGIWQTLLGACGIHRDL 182
++C D +++P+ EHYAC VDLL RAG L EAK LI SMP+ PTVG+WQTLL AC +H+D+
Sbjct: 437 RICQDPRLRPKAEHYACMVDLLGRAGELREAKELILSMPMAPTVGVWQTLLSACRVHKDV 496
Query: 183 EMGREVGKILLRLDGENPVNYVMLSNLYAEAGKWQECE 296
+GREVG +LL +DG+NPVNYVMLSN++AEAG+W+EC+
Sbjct: 497 GVGREVGDVLLSIDGDNPVNYVMLSNIFAEAGEWRECQ 534
>ref|XP_006578209.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15130-like [Glycine max]
Length = 542
Score = 147 bits (370), Expect = 2e-33
Identities = 66/97 (68%), Positives = 80/97 (82%)
Frame = +3
Query: 6 LCIDNQIKPRVEHYACFVDLLSRAGRLEEAKNLIESMPLEPTVGIWQTLLGACGIHRDLE 185
LC + +IKP+VEHYAC VDLL R GRL+EAKNLIE MPL+P VGIWQTLL C +H D+E
Sbjct: 292 LCSNQKIKPKVEHYACMVDLLGRGGRLKEAKNLIEKMPLKPNVGIWQTLLSVCRMHGDVE 351
Query: 186 MGREVGKILLRLDGENPVNYVMLSNLYAEAGKWQECE 296
MG++VG+ILLR +G NP NYVM+SN+YA AG W+E E
Sbjct: 352 MGKQVGEILLRREGNNPANYVMVSNMYAHAGYWKESE 388
>gb|EXC32783.1| hypothetical protein L484_019897 [Morus notabilis]
Length = 685
Score = 146 bits (369), Expect = 3e-33
Identities = 66/98 (67%), Positives = 83/98 (84%)
Frame = +3
Query: 3 KLCIDNQIKPRVEHYACFVDLLSRAGRLEEAKNLIESMPLEPTVGIWQTLLGACGIHRDL 182
+LC D ++KP+VEHYAC VDLL RAGRLEEAKNLI +MPL+P + IWQTLL AC IH +
Sbjct: 436 RLCNDRRLKPKVEHYACMVDLLGRAGRLEEAKNLIMNMPLKPNIEIWQTLLSACRIHGGI 495
Query: 183 EMGREVGKILLRLDGENPVNYVMLSNLYAEAGKWQECE 296
E+ REVG+I+LRLDG+N VNYV+LSN++A+AG W+E E
Sbjct: 496 ELAREVGEIILRLDGDNTVNYVLLSNIFADAGNWKEGE 533
>ref|XP_004959988.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15130-like [Setaria italica]
Length = 685
Score = 146 bits (368), Expect = 3e-33
Identities = 62/94 (65%), Positives = 81/94 (86%)
Frame = +3
Query: 15 DNQIKPRVEHYACFVDLLSRAGRLEEAKNLIESMPLEPTVGIWQTLLGACGIHRDLEMGR 194
+ +++PR EHYAC VDLL RAG L EA++LI +MP+EPTVGIWQTLLGAC +H+D+ +GR
Sbjct: 439 ERRVRPRAEHYACMVDLLGRAGELREARDLILTMPMEPTVGIWQTLLGACRVHKDVAVGR 498
Query: 195 EVGKILLRLDGENPVNYVMLSNLYAEAGKWQECE 296
E G +LL +DG+NPVNYVMLSN+ AEAG+W+EC+
Sbjct: 499 EAGDVLLAMDGDNPVNYVMLSNILAEAGEWRECQ 532
>ref|XP_002885072.1| hypothetical protein ARALYDRAFT_318289 [Arabidopsis lyrata subsp.
lyrata] gi|297330912|gb|EFH61331.1| hypothetical protein
ARALYDRAFT_318289 [Arabidopsis lyrata subsp. lyrata]
Length = 1134
Score = 145 bits (366), Expect = 6e-33
Identities = 65/96 (67%), Positives = 80/96 (83%)
Frame = +3
Query: 3 KLCIDNQIKPRVEHYACFVDLLSRAGRLEEAKNLIESMPLEPTVGIWQTLLGACGIHRDL 182
KL IKPRVEHYAC VDLL RAGRL+EAK+L+++MP++P VGIWQTLL C +H D+
Sbjct: 802 KLLETQGIKPRVEHYACVVDLLGRAGRLKEAKHLVDTMPIKPNVGIWQTLLSLCRVHGDI 861
Query: 183 EMGREVGKILLRLDGENPVNYVMLSNLYAEAGKWQE 290
E+G+EVGKILLR+DG+NP NYVM+SNLY +AG W E
Sbjct: 862 ELGKEVGKILLRIDGKNPANYVMMSNLYGQAGYWNE 897
>ref|NP_188131.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218546753|sp|P0C898.1|PP232_ARATH RecName:
Full=Putative pentatricopeptide repeat-containing
protein At3g15130 gi|332642102|gb|AEE75623.1|
pentatricopeptide repeat-containing protein [Arabidopsis
thaliana]
Length = 689
Score = 144 bits (362), Expect = 2e-32
Identities = 65/96 (67%), Positives = 80/96 (83%)
Frame = +3
Query: 3 KLCIDNQIKPRVEHYACFVDLLSRAGRLEEAKNLIESMPLEPTVGIWQTLLGACGIHRDL 182
KL + IKPRVEHYAC VDLL RAGRL+EAK+LI++MP++P VGIWQTLL C +H D+
Sbjct: 439 KLLETHGIKPRVEHYACVVDLLGRAGRLKEAKHLIDTMPIKPNVGIWQTLLSLCRVHGDI 498
Query: 183 EMGREVGKILLRLDGENPVNYVMLSNLYAEAGKWQE 290
E+G+EVGKILLR+D +NP NYVM+SNLY +AG W E
Sbjct: 499 ELGKEVGKILLRIDAKNPANYVMMSNLYGQAGYWNE 534
>dbj|BAB02568.1| unnamed protein product [Arabidopsis thaliana]
Length = 1161
Score = 144 bits (362), Expect = 2e-32
Identities = 65/96 (67%), Positives = 80/96 (83%)
Frame = +3
Query: 3 KLCIDNQIKPRVEHYACFVDLLSRAGRLEEAKNLIESMPLEPTVGIWQTLLGACGIHRDL 182
KL + IKPRVEHYAC VDLL RAGRL+EAK+LI++MP++P VGIWQTLL C +H D+
Sbjct: 810 KLLETHGIKPRVEHYACVVDLLGRAGRLKEAKHLIDTMPIKPNVGIWQTLLSLCRVHGDI 869
Query: 183 EMGREVGKILLRLDGENPVNYVMLSNLYAEAGKWQE 290
E+G+EVGKILLR+D +NP NYVM+SNLY +AG W E
Sbjct: 870 ELGKEVGKILLRIDAKNPANYVMMSNLYGQAGYWNE 905
>ref|XP_007012023.1| Tetratricopeptide repeat (TPR)-like superfamily protein [Theobroma
cacao] gi|508782386|gb|EOY29642.1| Tetratricopeptide
repeat (TPR)-like superfamily protein [Theobroma cacao]
Length = 692
Score = 143 bits (360), Expect = 3e-32
Identities = 65/98 (66%), Positives = 81/98 (82%)
Frame = +3
Query: 3 KLCIDNQIKPRVEHYACFVDLLSRAGRLEEAKNLIESMPLEPTVGIWQTLLGACGIHRDL 182
+LC + +KP +EHYAC VDLL R GRL+EAK+LIESMPL+P VGIWQTLL AC +H D
Sbjct: 443 QLCHNRWVKPGIEHYACMVDLLGRDGRLKEAKDLIESMPLKPNVGIWQTLLSACRVHGDP 502
Query: 183 EMGREVGKILLRLDGENPVNYVMLSNLYAEAGKWQECE 296
+MG+EVG+ LL LD +NPVNYVM+SN+YAEAG W++ E
Sbjct: 503 QMGKEVGESLLTLDSDNPVNYVMISNIYAEAGYWKDYE 540
>ref|XP_006297306.1| hypothetical protein CARUB_v10013320mg [Capsella rubella]
gi|482566015|gb|EOA30204.1| hypothetical protein
CARUB_v10013320mg [Capsella rubella]
Length = 578
Score = 142 bits (359), Expect = 4e-32
Identities = 65/96 (67%), Positives = 79/96 (82%)
Frame = +3
Query: 3 KLCIDNQIKPRVEHYACFVDLLSRAGRLEEAKNLIESMPLEPTVGIWQTLLGACGIHRDL 182
KL IKPRVEHYAC VDLL RAGRL+EAK+LI++MP++P VGIWQTLL C +H D+
Sbjct: 328 KLLETQGIKPRVEHYACVVDLLGRAGRLKEAKHLIDTMPIKPNVGIWQTLLSRCQVHGDM 387
Query: 183 EMGREVGKILLRLDGENPVNYVMLSNLYAEAGKWQE 290
E+G+EVGKILL +DG+NP NYVM+SNLY +AG W E
Sbjct: 388 ELGKEVGKILLWIDGKNPANYVMMSNLYGQAGYWNE 423
>ref|XP_006297305.1| hypothetical protein CARUB_v10013320mg [Capsella rubella]
gi|482566014|gb|EOA30203.1| hypothetical protein
CARUB_v10013320mg [Capsella rubella]
Length = 511
Score = 142 bits (359), Expect = 4e-32
Identities = 65/96 (67%), Positives = 79/96 (82%)
Frame = +3
Query: 3 KLCIDNQIKPRVEHYACFVDLLSRAGRLEEAKNLIESMPLEPTVGIWQTLLGACGIHRDL 182
KL IKPRVEHYAC VDLL RAGRL+EAK+LI++MP++P VGIWQTLL C +H D+
Sbjct: 261 KLLETQGIKPRVEHYACVVDLLGRAGRLKEAKHLIDTMPIKPNVGIWQTLLSRCQVHGDM 320
Query: 183 EMGREVGKILLRLDGENPVNYVMLSNLYAEAGKWQE 290
E+G+EVGKILL +DG+NP NYVM+SNLY +AG W E
Sbjct: 321 ELGKEVGKILLWIDGKNPANYVMMSNLYGQAGYWNE 356