BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus22_contig00021874
         (818 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_004429259.1| putative capsid protein [Fig cryptic virus] ...    97   7e-18
ref|XP_006837118.1| hypothetical protein AMTR_s00110p00120980, p...    77   1e-11
gb|AGI98171.1| coat protein, partial [Fig cryptic virus]               64   9e-08
gb|AGI98169.1| coat protein, partial [Fig cryptic virus]               61   4e-07

>ref|YP_004429259.1| putative capsid protein [Fig cryptic virus]
           gi|332163671|emb|CBW77437.1| putative capsid protein
           [Fig cryptic virus]
          Length = 337

 Score = 97.1 bits (240), Expect = 7e-18
 Identities = 70/236 (29%), Positives = 115/236 (48%), Gaps = 3/236 (1%)
 Frame = -1

Query: 806 IQNRATPLHEFELPQFYASMLSRIGPLHISDTLHETIVVY-APDQTRPYFGRLEDPEIDV 630
           +  RA   +  E P F +SML  I  L I+D   + + ++ AP  T   +GR      D 
Sbjct: 107 MNTRAPISNRMEFPSFLSSMLESISWLRINDGPVDYLALFTAPTGTSNNYGRSTVQVPDN 166

Query: 629 DQVTLFVQMLCSVDIPLGKIETWGSKGSYFTTCGRVTTHPQFFDIVGAFPLSNYSQDNIV 450
                    L ++ + L  I+   S GS++ T  +V T  + ++IVG F  S+Y  ++ +
Sbjct: 167 GCYDRLTGKLRALGVQLTPIDMTPSAGSFWPTT-QVITEEELYNIVGTFHSSHYVNEDAI 225

Query: 449 MAMLFGDFGADDNPFEDLSISVGFVSDEATVQAFVATRDPS--LKGETASGLSRHVGGSY 276
            A+      A   PF D  ++VGFV+D   +    A   P+   + E A+   R V G Y
Sbjct: 226 RAIFLAGT-AHSQPFPDFGMTVGFVTDRTVMDPLAALAAPTGTPRSEEATSAGRPVHGMY 284

Query: 275 GINYFGLARASDARGVNSSRRGIYVLGRGFQRHYASLLACRISNFEFIQILRNRML 108
            +N+ G+  A+  +  +    G Y++GRG++R Y   LA RI+ FE  +I+R R +
Sbjct: 285 NVNHRGIQPAAGEQNPS----GCYIIGRGYERRYTCYLARRIAVFEANRIIRYRFM 336


>ref|XP_006837118.1| hypothetical protein AMTR_s00110p00120980, partial [Amborella
           trichopoda] gi|548839711|gb|ERM99971.1| hypothetical
           protein AMTR_s00110p00120980, partial [Amborella
           trichopoda]
          Length = 105

 Score = 76.6 bits (187), Expect = 1e-11
 Identities = 42/85 (49%), Positives = 54/85 (63%)
 Frame = -1

Query: 443 MLFGDFGADDNPFEDLSISVGFVSDEATVQAFVATRDPSLKGETASGLSRHVGGSYGINY 264
           MLFG FG+  +PFED  +++GFVSDE  + AF+    P  +G   +  +RHV G + IN 
Sbjct: 1   MLFGTFGSTKHPFEDPFLTIGFVSDETVIDAFLRIPSP-FEGILPTADARHVWGDFAINP 59

Query: 263 FGLARASDARGVNSSRRGIYVLGRG 189
           FGLA ASD   V    +GIYVLGRG
Sbjct: 60  FGLALASDT-PVEGRGKGIYVLGRG 83


>gb|AGI98171.1| coat protein, partial [Fig cryptic virus]
          Length = 115

 Score = 63.5 bits (153), Expect = 9e-08
 Identities = 37/117 (31%), Positives = 59/117 (50%), Gaps = 2/117 (1%)
 Frame = -1

Query: 503 FDIVGAFPLSNYSQDNIVMAMLFGDFGADDNPFEDLSISVGFVSDEATVQAFVATRDP-- 330
           F IVG F  S+Y  ++ + A+      A   PF D  ++VGFV+D   +    A   P  
Sbjct: 4   FQIVGTFHSSHYVNEDAIRAIFLAGT-AHSQPFPDFGMTVGFVTDRTVMDPLAALAAPTG 62

Query: 329 SLKGETASGLSRHVGGSYGINYFGLARASDARGVNSSRRGIYVLGRGFQRHYASLLA 159
           + + E A+   R V G Y +N+ G+  A+  +  +    G Y++GRG++R Y   LA
Sbjct: 63  TPRSEEATSAGRPVHGMYNVNHRGIQPAAGEQNPS----GCYIIGRGYERRYTCYLA 115


>gb|AGI98169.1| coat protein, partial [Fig cryptic virus]
          Length = 115

 Score = 61.2 bits (147), Expect = 4e-07
 Identities = 36/115 (31%), Positives = 58/115 (50%), Gaps = 2/115 (1%)
 Frame = -1

Query: 497 IVGAFPLSNYSQDNIVMAMLFGDFGADDNPFEDLSISVGFVSDEATVQAFVATRDP--SL 324
           IVG F  S+Y  ++ + A+      A   PF D  ++VGFV+D   +    A   P  + 
Sbjct: 6   IVGTFHSSHYVNEDAIRAIFLAGT-AHSQPFPDFGMTVGFVTDRTVMDPLAALAAPTGTP 64

Query: 323 KGETASGLSRHVGGSYGINYFGLARASDARGVNSSRRGIYVLGRGFQRHYASLLA 159
           + E A+   R V G Y +N+ G+  A+  +  +    G Y++GRG++R Y   LA
Sbjct: 65  RSEEATSAGRPVHGMYNVNHRGIQPAAGEQNPS----GCYIIGRGYERRYTCYLA 115