BLASTX nr result
ID: Cocculus22_contig00021764
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus22_contig00021764
(302 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI17913.3| unnamed protein product [Vitis vinifera] 75 1e-11
ref|XP_002263967.1| PREDICTED: DNA ligase 4-like [Vitis vinifera] 75 1e-11
ref|XP_007225204.1| hypothetical protein PRUPE_ppa002057mg [Prun... 71 1e-10
ref|XP_007014429.1| DNA ligase IV [Theobroma cacao] gi|508784792... 70 2e-10
gb|EXC31206.1| DNA ligase 4 [Morus notabilis] 68 2e-09
ref|XP_004487997.1| PREDICTED: DNA ligase 4-like [Cicer arietinum] 62 8e-08
ref|XP_004165348.1| PREDICTED: LOW QUALITY PROTEIN: DNA ligase 4... 62 1e-07
ref|XP_004149513.1| PREDICTED: DNA ligase 4-like [Cucumis sativus] 62 1e-07
ref|XP_002534602.1| conserved hypothetical protein [Ricinus comm... 61 1e-07
ref|XP_006597804.1| PREDICTED: DNA ligase 4-like isoform X5 [Gly... 59 5e-07
ref|XP_006597803.1| PREDICTED: DNA ligase 4-like isoform X4 [Gly... 59 5e-07
ref|XP_006597802.1| PREDICTED: DNA ligase 4-like isoform X3 [Gly... 59 5e-07
ref|XP_006597801.1| PREDICTED: DNA ligase 4-like isoform X2 [Gly... 59 5e-07
ref|XP_003546435.1| PREDICTED: DNA ligase 4-like isoform X1 [Gly... 59 5e-07
ref|XP_004978220.1| PREDICTED: LOW QUALITY PROTEIN: putative DNA... 56 5e-06
ref|XP_004242917.1| PREDICTED: DNA ligase 4-like [Solanum lycope... 56 5e-06
>emb|CBI17913.3| unnamed protein product [Vitis vinifera]
Length = 1163
Score = 75.1 bits (183), Expect = 1e-11
Identities = 41/67 (61%), Positives = 49/67 (73%)
Frame = -3
Query: 216 QKLEVMVDPLQAMLLDMIPTLGEKKVNETSKSVTLSEEPQLDSGAEPXXXXXXVSYKDVA 37
+KLEVMVDP+QAMLLDMIP+LG KK T+ + E+P ++ GAEP VSYKDVA
Sbjct: 1099 EKLEVMVDPVQAMLLDMIPSLGVKKAESTNPIID-DEKPPVEQGAEP-VKKKKVSYKDVA 1156
Query: 36 GELLKDW 16
G LLKDW
Sbjct: 1157 GALLKDW 1163
>ref|XP_002263967.1| PREDICTED: DNA ligase 4-like [Vitis vinifera]
Length = 1162
Score = 75.1 bits (183), Expect = 1e-11
Identities = 41/67 (61%), Positives = 49/67 (73%)
Frame = -3
Query: 216 QKLEVMVDPLQAMLLDMIPTLGEKKVNETSKSVTLSEEPQLDSGAEPXXXXXXVSYKDVA 37
+KLEVMVDP+QAMLLDMIP+LG KK T+ + E+P ++ GAEP VSYKDVA
Sbjct: 1098 EKLEVMVDPVQAMLLDMIPSLGVKKAESTNPIID-DEKPPVEQGAEP-VKKKKVSYKDVA 1155
Query: 36 GELLKDW 16
G LLKDW
Sbjct: 1156 GALLKDW 1162
>ref|XP_007225204.1| hypothetical protein PRUPE_ppa002057mg [Prunus persica]
gi|462422140|gb|EMJ26403.1| hypothetical protein
PRUPE_ppa002057mg [Prunus persica]
Length = 723
Score = 71.2 bits (173), Expect = 1e-10
Identities = 40/67 (59%), Positives = 47/67 (70%)
Frame = -3
Query: 216 QKLEVMVDPLQAMLLDMIPTLGEKKVNETSKSVTLSEEPQLDSGAEPXXXXXXVSYKDVA 37
+KLEVM DP+QAML DMIP+L KKV T+ S+ E+P +D A P VSYKDVA
Sbjct: 659 EKLEVMADPVQAMLFDMIPSLAMKKVETTNTSIE-KEKPAVDLNAGP-SKKKKVSYKDVA 716
Query: 36 GELLKDW 16
GELLKDW
Sbjct: 717 GELLKDW 723
>ref|XP_007014429.1| DNA ligase IV [Theobroma cacao] gi|508784792|gb|EOY32048.1| DNA
ligase IV [Theobroma cacao]
Length = 1195
Score = 70.5 bits (171), Expect = 2e-10
Identities = 47/103 (45%), Positives = 55/103 (53%), Gaps = 15/103 (14%)
Frame = -3
Query: 279 CGQAEXXXXXXXXXXXXXXXSQKLEVMVDPLQAMLLDMIPTLGEKKVNETSKSVTLSEEP 100
C +AE S+KLEVMVDP+QAMLLDMIP+LG K V E + S +E+P
Sbjct: 1094 CKKAEKYNLMELDQENCGAKSEKLEVMVDPVQAMLLDMIPSLGIKHV-EATNSFVENEKP 1152
Query: 99 QLDSGAE---------------PXXXXXXVSYKDVAGELLKDW 16
D+ AE P VSYKDVAGELLKDW
Sbjct: 1153 PADNNAEIPVVEDYKLDADFIAPPVKKKKVSYKDVAGELLKDW 1195
>gb|EXC31206.1| DNA ligase 4 [Morus notabilis]
Length = 821
Score = 67.8 bits (164), Expect = 2e-09
Identities = 37/67 (55%), Positives = 48/67 (71%)
Frame = -3
Query: 216 QKLEVMVDPLQAMLLDMIPTLGEKKVNETSKSVTLSEEPQLDSGAEPXXXXXXVSYKDVA 37
+KLE+M DP+ AMLLDMIP LG++KV T+ S T ++P +D A P VSYKD+A
Sbjct: 757 EKLELMTDPVHAMLLDMIPRLGKEKVEITNTS-TEDKKPAVDPNA-PQPKKKKVSYKDIA 814
Query: 36 GELLKDW 16
G+LLKDW
Sbjct: 815 GDLLKDW 821
>ref|XP_004487997.1| PREDICTED: DNA ligase 4-like [Cicer arietinum]
Length = 1168
Score = 62.0 bits (149), Expect = 8e-08
Identities = 33/68 (48%), Positives = 44/68 (64%), Gaps = 1/68 (1%)
Frame = -3
Query: 216 QKLEVMVDPLQAMLLDMIPTLGEKKVNETSKSVTLSEEPQLDSGAEP-XXXXXXVSYKDV 40
+KLE++ DP+QAMLLDMIP+L +KV + S E+P S EP VS+K +
Sbjct: 1101 EKLEILTDPVQAMLLDMIPSLATEKVEQPLNSYVEEEKPPEISNEEPSTSKKKKVSFKAI 1160
Query: 39 AGELLKDW 16
AG+LLKDW
Sbjct: 1161 AGDLLKDW 1168
>ref|XP_004165348.1| PREDICTED: LOW QUALITY PROTEIN: DNA ligase 4-like, partial [Cucumis
sativus]
Length = 918
Score = 61.6 bits (148), Expect = 1e-07
Identities = 35/71 (49%), Positives = 46/71 (64%), Gaps = 4/71 (5%)
Frame = -3
Query: 216 QKLEVMVDPLQAMLLDMIPTLG----EKKVNETSKSVTLSEEPQLDSGAEPXXXXXXVSY 49
+KLEVM DPL+AMLLDM+P+LG + ++ +S S T+ EE + + VSY
Sbjct: 848 EKLEVMKDPLEAMLLDMVPSLGMSGTKSSISSSSSSSTVVEEKKPFVENKSEAVKKKVSY 907
Query: 48 KDVAGELLKDW 16
KDVA ELLKDW
Sbjct: 908 KDVASELLKDW 918
>ref|XP_004149513.1| PREDICTED: DNA ligase 4-like [Cucumis sativus]
Length = 1214
Score = 61.6 bits (148), Expect = 1e-07
Identities = 35/71 (49%), Positives = 46/71 (64%), Gaps = 4/71 (5%)
Frame = -3
Query: 216 QKLEVMVDPLQAMLLDMIPTLG----EKKVNETSKSVTLSEEPQLDSGAEPXXXXXXVSY 49
+KLEVM DPL+AMLLDM+P+LG + ++ +S S T+ EE + + VSY
Sbjct: 1144 EKLEVMKDPLEAMLLDMVPSLGMSGTKSSISSSSSSSTVVEEKKPFVENKSEAVKKKVSY 1203
Query: 48 KDVAGELLKDW 16
KDVA ELLKDW
Sbjct: 1204 KDVASELLKDW 1214
>ref|XP_002534602.1| conserved hypothetical protein [Ricinus communis]
gi|223524943|gb|EEF27780.1| conserved hypothetical
protein [Ricinus communis]
Length = 251
Score = 61.2 bits (147), Expect = 1e-07
Identities = 37/65 (56%), Positives = 44/65 (67%)
Frame = -3
Query: 213 KLEVMVDPLQAMLLDMIPTLGEKKVNETSKSVTLSEEPQLDSGAEPXXXXXXVSYKDVAG 34
KLE+MVDP+ AMLLDMIP+LG + V E S V E+P D A+P VSYKDVA
Sbjct: 189 KLEIMVDPIHAMLLDMIPSLGVRNV-EISNQVFEREKPAGDPTAQP-VKKKKVSYKDVAS 246
Query: 33 ELLKD 19
E+LKD
Sbjct: 247 EMLKD 251
>ref|XP_006597804.1| PREDICTED: DNA ligase 4-like isoform X5 [Glycine max]
Length = 939
Score = 59.3 bits (142), Expect = 5e-07
Identities = 36/70 (51%), Positives = 46/70 (65%), Gaps = 3/70 (4%)
Frame = -3
Query: 216 QKLEVMVDPLQAMLLDMIPTLGEKKVNE-TSKSVTLSEEPQLDSG-AEP-XXXXXXVSYK 46
+KLE+ DPLQAML DMIP+L +KV + ++SV + P+ + AEP VSYK
Sbjct: 870 EKLEISADPLQAMLFDMIPSLATQKVEQPMNRSVREEKLPETSNAEAEPMTTKKKKVSYK 929
Query: 45 DVAGELLKDW 16
DVA ELLKDW
Sbjct: 930 DVASELLKDW 939
>ref|XP_006597803.1| PREDICTED: DNA ligase 4-like isoform X4 [Glycine max]
Length = 955
Score = 59.3 bits (142), Expect = 5e-07
Identities = 36/70 (51%), Positives = 46/70 (65%), Gaps = 3/70 (4%)
Frame = -3
Query: 216 QKLEVMVDPLQAMLLDMIPTLGEKKVNE-TSKSVTLSEEPQLDSG-AEP-XXXXXXVSYK 46
+KLE+ DPLQAML DMIP+L +KV + ++SV + P+ + AEP VSYK
Sbjct: 886 EKLEISADPLQAMLFDMIPSLATQKVEQPMNRSVREEKLPETSNAEAEPMTTKKKKVSYK 945
Query: 45 DVAGELLKDW 16
DVA ELLKDW
Sbjct: 946 DVASELLKDW 955
>ref|XP_006597802.1| PREDICTED: DNA ligase 4-like isoform X3 [Glycine max]
Length = 1011
Score = 59.3 bits (142), Expect = 5e-07
Identities = 36/70 (51%), Positives = 46/70 (65%), Gaps = 3/70 (4%)
Frame = -3
Query: 216 QKLEVMVDPLQAMLLDMIPTLGEKKVNE-TSKSVTLSEEPQLDSG-AEP-XXXXXXVSYK 46
+KLE+ DPLQAML DMIP+L +KV + ++SV + P+ + AEP VSYK
Sbjct: 942 EKLEISADPLQAMLFDMIPSLATQKVEQPMNRSVREEKLPETSNAEAEPMTTKKKKVSYK 1001
Query: 45 DVAGELLKDW 16
DVA ELLKDW
Sbjct: 1002 DVASELLKDW 1011
>ref|XP_006597801.1| PREDICTED: DNA ligase 4-like isoform X2 [Glycine max]
Length = 1104
Score = 59.3 bits (142), Expect = 5e-07
Identities = 36/70 (51%), Positives = 46/70 (65%), Gaps = 3/70 (4%)
Frame = -3
Query: 216 QKLEVMVDPLQAMLLDMIPTLGEKKVNE-TSKSVTLSEEPQLDSG-AEP-XXXXXXVSYK 46
+KLE+ DPLQAML DMIP+L +KV + ++SV + P+ + AEP VSYK
Sbjct: 1035 EKLEISADPLQAMLFDMIPSLATQKVEQPMNRSVREEKLPETSNAEAEPMTTKKKKVSYK 1094
Query: 45 DVAGELLKDW 16
DVA ELLKDW
Sbjct: 1095 DVASELLKDW 1104
>ref|XP_003546435.1| PREDICTED: DNA ligase 4-like isoform X1 [Glycine max]
Length = 1171
Score = 59.3 bits (142), Expect = 5e-07
Identities = 36/70 (51%), Positives = 46/70 (65%), Gaps = 3/70 (4%)
Frame = -3
Query: 216 QKLEVMVDPLQAMLLDMIPTLGEKKVNE-TSKSVTLSEEPQLDSG-AEP-XXXXXXVSYK 46
+KLE+ DPLQAML DMIP+L +KV + ++SV + P+ + AEP VSYK
Sbjct: 1102 EKLEISADPLQAMLFDMIPSLATQKVEQPMNRSVREEKLPETSNAEAEPMTTKKKKVSYK 1161
Query: 45 DVAGELLKDW 16
DVA ELLKDW
Sbjct: 1162 DVASELLKDW 1171
>ref|XP_004978220.1| PREDICTED: LOW QUALITY PROTEIN: putative DNA ligase 4-like [Setaria
italica]
Length = 1241
Score = 56.2 bits (134), Expect = 5e-06
Identities = 39/94 (41%), Positives = 45/94 (47%), Gaps = 27/94 (28%)
Frame = -3
Query: 216 QKLEVMVDPLQAMLLDMIPTLGEKKV--------------------NETSKSVTL----- 112
+K+E MVDPL AMLLDMIPTL + + + TSKS +
Sbjct: 1148 EKIEQMVDPLHAMLLDMIPTLSQTRTEGASRVPPPTIVEKAPPGVGSNTSKSSDILVPDA 1207
Query: 111 --SEEPQLDSGAEPXXXXXXVSYKDVAGELLKDW 16
S P D A P VSYKDVA ELLKDW
Sbjct: 1208 GTSGVPAPDPNAAPPPKKKKVSYKDVASELLKDW 1241
>ref|XP_004242917.1| PREDICTED: DNA ligase 4-like [Solanum lycopersicum]
Length = 1172
Score = 56.2 bits (134), Expect = 5e-06
Identities = 32/67 (47%), Positives = 42/67 (62%)
Frame = -3
Query: 216 QKLEVMVDPLQAMLLDMIPTLGEKKVNETSKSVTLSEEPQLDSGAEPXXXXXXVSYKDVA 37
+KLE VDP+QAMLL MIP L + K + ++ ++P D+ P +SYKDVA
Sbjct: 1108 EKLEDPVDPVQAMLLHMIPHL-DSKPTRSIDTLVKDDKPDADTNPSP-KKKKKISYKDVA 1165
Query: 36 GELLKDW 16
GELLKDW
Sbjct: 1166 GELLKDW 1172