BLASTX nr result
ID: Cocculus22_contig00021621
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus22_contig00021621
(414 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002283791.1| PREDICTED: pentatricopeptide repeat-containi... 135 6e-30
emb|CAN72397.1| hypothetical protein VITISV_041201 [Vitis vinifera] 135 8e-30
ref|XP_007208240.1| hypothetical protein PRUPE_ppa016950mg, part... 125 8e-27
ref|XP_006488968.1| PREDICTED: pentatricopeptide repeat-containi... 124 1e-26
ref|XP_006445545.1| hypothetical protein CICLE_v10014960mg [Citr... 124 1e-26
ref|XP_002523384.1| pentatricopeptide repeat-containing protein,... 122 7e-26
ref|XP_002303975.2| pentatricopeptide repeat-containing family p... 119 6e-25
ref|XP_004294930.1| PREDICTED: pentatricopeptide repeat-containi... 115 8e-24
ref|XP_007014654.1| Pentatricopeptide repeat (PPR) superfamily p... 112 4e-23
gb|EXB88915.1| hypothetical protein L484_003611 [Morus notabilis] 112 5e-23
ref|XP_007206274.1| hypothetical protein PRUPE_ppa016070mg [Prun... 111 1e-22
gb|ABK26521.1| unknown [Picea sitchensis] 111 1e-22
ref|XP_004304765.1| PREDICTED: pentatricopeptide repeat-containi... 109 5e-22
ref|XP_004144134.1| PREDICTED: pentatricopeptide repeat-containi... 109 5e-22
gb|AEW07919.1| hypothetical protein 0_14503_01, partial [Pinus l... 109 5e-22
gb|AFG55297.1| hypothetical protein 0_14503_01, partial [Pinus t... 108 6e-22
gb|AFG55306.1| hypothetical protein 0_14503_01, partial [Pinus t... 108 1e-21
gb|AFG55300.1| hypothetical protein 0_14503_01, partial [Pinus t... 107 1e-21
gb|AEW07918.1| hypothetical protein 0_14503_01, partial [Pinus r... 107 1e-21
dbj|BAD34344.1| putative pentatricopeptide (PPR) repeat-containi... 107 2e-21
>ref|XP_002283791.1| PREDICTED: pentatricopeptide repeat-containing protein At5g56310
[Vitis vinifera]
Length = 576
Score = 135 bits (340), Expect = 6e-30
Identities = 66/97 (68%), Positives = 76/97 (78%)
Frame = +3
Query: 3 LIEMEPRNSGNYTLLSNIYAASGMWHEVGAVRKTMRDKGVKKMPGGSSIEVNNRVHEFIS 182
LI++EP NSGNYTLLSNIYA W+E G VRK MRD GVKKMPGGS IEVNNRVHEF++
Sbjct: 466 LIKVEPHNSGNYTLLSNIYATQSKWNEAGMVRKVMRDTGVKKMPGGSCIEVNNRVHEFVA 525
Query: 183 GDKSHPHLERIYEVLSEINEQSKMAGYCPEEFSWLLE 293
GDK HP ERI+EVL +IN QSK+A Y +E +LE
Sbjct: 526 GDKLHPQSERIFEVLCKINLQSKIAMYVQKEHVEMLE 562
>emb|CAN72397.1| hypothetical protein VITISV_041201 [Vitis vinifera]
Length = 576
Score = 135 bits (339), Expect = 8e-30
Identities = 65/97 (67%), Positives = 76/97 (78%)
Frame = +3
Query: 3 LIEMEPRNSGNYTLLSNIYAASGMWHEVGAVRKTMRDKGVKKMPGGSSIEVNNRVHEFIS 182
LI++EP NSGNYTLLSNIYA W+E G VRK MRD GVKKMPGGS IEVNNRVHEF++
Sbjct: 466 LIKVEPHNSGNYTLLSNIYATQSKWNEAGMVRKVMRDTGVKKMPGGSCIEVNNRVHEFVA 525
Query: 183 GDKSHPHLERIYEVLSEINEQSKMAGYCPEEFSWLLE 293
GDK HP ERI+EVL ++N QSK+A Y +E +LE
Sbjct: 526 GDKLHPQSERIFEVLCKJNLQSKIAMYVQKEHVEMLE 562
>ref|XP_007208240.1| hypothetical protein PRUPE_ppa016950mg, partial [Prunus persica]
gi|462403882|gb|EMJ09439.1| hypothetical protein
PRUPE_ppa016950mg, partial [Prunus persica]
Length = 532
Score = 125 bits (313), Expect = 8e-27
Identities = 62/97 (63%), Positives = 72/97 (74%)
Frame = +3
Query: 3 LIEMEPRNSGNYTLLSNIYAASGMWHEVGAVRKTMRDKGVKKMPGGSSIEVNNRVHEFIS 182
LI +EP NSGNY LLSN+Y + G W E G +RK MRD GVKK PG SSIEVNNRVHEFI+
Sbjct: 433 LIMLEPHNSGNYALLSNVYGSLGRWDESGMLRKVMRDTGVKKTPGRSSIEVNNRVHEFIA 492
Query: 183 GDKSHPHLERIYEVLSEINEQSKMAGYCPEEFSWLLE 293
GDKSH RIYEVL +I Q K+AG+ ++F LLE
Sbjct: 493 GDKSHFECTRIYEVLYKIFRQLKLAGHLQQDFGELLE 529
>ref|XP_006488968.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g56310-like isoform X1 [Citrus sinensis]
gi|568871598|ref|XP_006488969.1| PREDICTED:
pentatricopeptide repeat-containing protein
At5g56310-like isoform X2 [Citrus sinensis]
Length = 564
Score = 124 bits (312), Expect = 1e-26
Identities = 58/97 (59%), Positives = 73/97 (75%)
Frame = +3
Query: 3 LIEMEPRNSGNYTLLSNIYAASGMWHEVGAVRKTMRDKGVKKMPGGSSIEVNNRVHEFIS 182
LI++EP NSGNY +LSNIYA G W+E G +RK MRD GVKKMPG S IEV+ RVHEF++
Sbjct: 462 LIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVA 521
Query: 183 GDKSHPHLERIYEVLSEINEQSKMAGYCPEEFSWLLE 293
GD SHP +R+Y++L +IN Q K A + EFS +LE
Sbjct: 522 GDTSHPDFDRLYQILCKINGQMKFAEHLQNEFSGVLE 558
>ref|XP_006445545.1| hypothetical protein CICLE_v10014960mg [Citrus clementina]
gi|557548156|gb|ESR58785.1| hypothetical protein
CICLE_v10014960mg [Citrus clementina]
Length = 510
Score = 124 bits (312), Expect = 1e-26
Identities = 58/97 (59%), Positives = 73/97 (75%)
Frame = +3
Query: 3 LIEMEPRNSGNYTLLSNIYAASGMWHEVGAVRKTMRDKGVKKMPGGSSIEVNNRVHEFIS 182
LI++EP NSGNY +LSNIYA G W+E G +RK MRD GVKKMPG S IEV+ RVHEF++
Sbjct: 405 LIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKRVHEFVA 464
Query: 183 GDKSHPHLERIYEVLSEINEQSKMAGYCPEEFSWLLE 293
GD SHP +R+Y++L +IN Q K A + EFS +LE
Sbjct: 465 GDTSHPDFDRLYQILCKINGQMKFAEHLQNEFSGVLE 501
>ref|XP_002523384.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223537334|gb|EEF38963.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 538
Score = 122 bits (305), Expect = 7e-26
Identities = 60/97 (61%), Positives = 74/97 (76%)
Frame = +3
Query: 3 LIEMEPRNSGNYTLLSNIYAASGMWHEVGAVRKTMRDKGVKKMPGGSSIEVNNRVHEFIS 182
LIE+EP NSGNY LLSNIYA+ G W VRK MRD+GVKK+PGGS IEVNNRV+EFI+
Sbjct: 438 LIELEPNNSGNYALLSNIYASLGRWKASRIVRKMMRDRGVKKIPGGSFIEVNNRVNEFIA 497
Query: 183 GDKSHPHLERIYEVLSEINEQSKMAGYCPEEFSWLLE 293
G+ SHP + IYEV+ +INEQS+++ +E LLE
Sbjct: 498 GETSHPQFDEIYEVIYKINEQSRLSESLEKECFELLE 534
>ref|XP_002303975.2| pentatricopeptide repeat-containing family protein [Populus
trichocarpa] gi|550343649|gb|EEE78954.2|
pentatricopeptide repeat-containing family protein
[Populus trichocarpa]
Length = 543
Score = 119 bits (297), Expect = 6e-25
Identities = 60/97 (61%), Positives = 72/97 (74%)
Frame = +3
Query: 3 LIEMEPRNSGNYTLLSNIYAASGMWHEVGAVRKTMRDKGVKKMPGGSSIEVNNRVHEFIS 182
L+E+EP NSGNY LLSNIYA+ G W+E VRK M D GVKKMPGGS IEVNNRVHEFI+
Sbjct: 445 LLELEPDNSGNYALLSNIYASRGRWNESRVVRKVMWDAGVKKMPGGSLIEVNNRVHEFIA 504
Query: 183 GDKSHPHLERIYEVLSEINEQSKMAGYCPEEFSWLLE 293
G+ SH +RI EVLS+IN Q ++ + +E LLE
Sbjct: 505 GEISHSQFDRIQEVLSKINRQLGLSQHFEKESGALLE 541
>ref|XP_004294930.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g56310-like [Fragaria vesca subsp. vesca]
Length = 518
Score = 115 bits (287), Expect = 8e-24
Identities = 57/97 (58%), Positives = 73/97 (75%)
Frame = +3
Query: 3 LIEMEPRNSGNYTLLSNIYAASGMWHEVGAVRKTMRDKGVKKMPGGSSIEVNNRVHEFIS 182
LI++EP+NSGNY+LLSN Y A G W++ +RK MRD GVKKMPG SSIEVN+RVH FI+
Sbjct: 419 LIKLEPQNSGNYSLLSNTYTALGRWNDSRMLRKVMRDNGVKKMPGRSSIEVNSRVHGFIA 478
Query: 183 GDKSHPHLERIYEVLSEINEQSKMAGYCPEEFSWLLE 293
GDKSH E+IYEVL ++ QS +A + ++ LLE
Sbjct: 479 GDKSHSEREKIYEVLYKLLSQSTLACHPQQDCGELLE 515
>ref|XP_007014654.1| Pentatricopeptide repeat (PPR) superfamily protein, putative
isoform 1 [Theobroma cacao]
gi|590582550|ref|XP_007014655.1| Pentatricopeptide
repeat (PPR) superfamily protein, putative isoform 1
[Theobroma cacao] gi|508785017|gb|EOY32273.1|
Pentatricopeptide repeat (PPR) superfamily protein,
putative isoform 1 [Theobroma cacao]
gi|508785018|gb|EOY32274.1| Pentatricopeptide repeat
(PPR) superfamily protein, putative isoform 1 [Theobroma
cacao]
Length = 540
Score = 112 bits (281), Expect = 4e-23
Identities = 55/100 (55%), Positives = 70/100 (70%)
Frame = +3
Query: 3 LIEMEPRNSGNYTLLSNIYAASGMWHEVGAVRKTMRDKGVKKMPGGSSIEVNNRVHEFIS 182
L+E+EP NSGNY LLSNIYA+ G W + RK MRD+GV KMPG S I+V+NR HEFI+
Sbjct: 441 LVELEPWNSGNYALLSNIYASGGRWDKSVITRKMMRDQGVPKMPGRSFIQVSNRAHEFIA 500
Query: 183 GDKSHPHLERIYEVLSEINEQSKMAGYCPEEFSWLLE*KG 302
GD SHP +RI+ +L +NEQ K+ + EF LL+ G
Sbjct: 501 GDVSHPQYDRIHGILFNLNEQLKIVHHLLSEFDELLDFDG 540
>gb|EXB88915.1| hypothetical protein L484_003611 [Morus notabilis]
Length = 524
Score = 112 bits (280), Expect = 5e-23
Identities = 57/91 (62%), Positives = 64/91 (70%)
Frame = +3
Query: 3 LIEMEPRNSGNYTLLSNIYAASGMWHEVGAVRKTMRDKGVKKMPGGSSIEVNNRVHEFIS 182
L+ +EP NSGNY LLSN YAA W E G VRK M+D G+KKMPGGS IEVNNRVH+FI+
Sbjct: 425 LMVLEPYNSGNYMLLSNTYAALDGWDESGVVRKVMKDIGIKKMPGGSFIEVNNRVHKFIA 484
Query: 183 GDKSHPHLERIYEVLSEINEQSKMAGYCPEE 275
GD SH RI+EV EI Q KM G EE
Sbjct: 485 GDTSHSEFNRIFEVACEIFYQLKMIGNLQEE 515
>ref|XP_007206274.1| hypothetical protein PRUPE_ppa016070mg [Prunus persica]
gi|462401916|gb|EMJ07473.1| hypothetical protein
PRUPE_ppa016070mg [Prunus persica]
Length = 608
Score = 111 bits (277), Expect = 1e-22
Identities = 52/89 (58%), Positives = 67/89 (75%)
Frame = +3
Query: 3 LIEMEPRNSGNYTLLSNIYAASGMWHEVGAVRKTMRDKGVKKMPGGSSIEVNNRVHEFIS 182
L+E+EP+N G L+SNIYAAS W+EV VRK M+D+G KK PG SSIEVN VH+FI
Sbjct: 431 LLELEPQNCGYNILMSNIYAASNRWNEVDGVRKYMKDRGTKKEPGLSSIEVNGSVHDFIM 490
Query: 183 GDKSHPHLERIYEVLSEINEQSKMAGYCP 269
GDK+HP +IYE+L+E+ ++ K AGY P
Sbjct: 491 GDKAHPQTRKIYEMLAEMTKKLKEAGYTP 519
>gb|ABK26521.1| unknown [Picea sitchensis]
Length = 370
Score = 111 bits (277), Expect = 1e-22
Identities = 53/89 (59%), Positives = 61/89 (68%)
Frame = +3
Query: 3 LIEMEPRNSGNYTLLSNIYAASGMWHEVGAVRKTMRDKGVKKMPGGSSIEVNNRVHEFIS 182
LIE+ P N G Y LLSNIYAA+G W + G VRK M+D+ VKK PG S IEV N+VH FI
Sbjct: 193 LIELTPENPGTYVLLSNIYAAAGRWDDAGKVRKMMKDRSVKKEPGCSWIEVQNKVHPFIV 252
Query: 183 GDKSHPHLERIYEVLSEINEQSKMAGYCP 269
GD SHP +E IYE L + Q K AGY P
Sbjct: 253 GDSSHPQIEEIYETLETLTLQMKAAGYIP 281
>ref|XP_004304765.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Fragaria vesca subsp. vesca]
Length = 684
Score = 109 bits (272), Expect = 5e-22
Identities = 50/89 (56%), Positives = 67/89 (75%)
Frame = +3
Query: 3 LIEMEPRNSGNYTLLSNIYAASGMWHEVGAVRKTMRDKGVKKMPGGSSIEVNNRVHEFIS 182
L+++EP+N G L+SNIYAAS W +V VRK M+D+G KK PG SSIEVN VH+F+
Sbjct: 507 LLKLEPQNCGYNVLMSNIYAASNKWVDVAGVRKAMKDQGTKKEPGLSSIEVNGAVHDFMM 566
Query: 183 GDKSHPHLERIYEVLSEINEQSKMAGYCP 269
GDK+HP +IYE+L+E+N++ K AGY P
Sbjct: 567 GDKTHPQTRKIYEMLAEMNKKLKEAGYTP 595
>ref|XP_004144134.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g56310-like [Cucumis sativus]
gi|449493602|ref|XP_004159370.1| PREDICTED:
pentatricopeptide repeat-containing protein
At5g56310-like [Cucumis sativus]
Length = 548
Score = 109 bits (272), Expect = 5e-22
Identities = 56/97 (57%), Positives = 68/97 (70%)
Frame = +3
Query: 3 LIEMEPRNSGNYTLLSNIYAASGMWHEVGAVRKTMRDKGVKKMPGGSSIEVNNRVHEFIS 182
L ++EP NSGNY LLSN YAA G W+E G VRK MR+ GVKK PGGS IE+NN V+EF++
Sbjct: 449 LAKLEPGNSGNYVLLSNTYAALGKWNESGTVRKLMRNAGVKKAPGGSVIEINNIVYEFLA 508
Query: 183 GDKSHPHLERIYEVLSEINEQSKMAGYCPEEFSWLLE 293
GD S + IY VL +I Q KMAG EE+S L+
Sbjct: 509 GDMSDSQVHEIYHVLCKIILQLKMAGSYQEEWSKFLD 545
>gb|AEW07919.1| hypothetical protein 0_14503_01, partial [Pinus lambertiana]
Length = 160
Score = 109 bits (272), Expect = 5e-22
Identities = 50/87 (57%), Positives = 64/87 (73%)
Frame = +3
Query: 3 LIEMEPRNSGNYTLLSNIYAASGMWHEVGAVRKTMRDKGVKKMPGGSSIEVNNRVHEFIS 182
L E++P N+GNY LLSNIYAA+G W VG +RK MRDKG+K+ PG S IE NRVH FI+
Sbjct: 73 LFELQPENAGNYVLLSNIYAAAGKWDNVGKIRKIMRDKGLKRTPGCSWIEHKNRVHTFIA 132
Query: 183 GDKSHPHLERIYEVLSEINEQSKMAGY 263
GD+SHP +E+I E L + + + AGY
Sbjct: 133 GDRSHPQIEKISETLESLAGKMEAAGY 159
>gb|AFG55297.1| hypothetical protein 0_14503_01, partial [Pinus taeda]
Length = 160
Score = 108 bits (271), Expect = 6e-22
Identities = 49/87 (56%), Positives = 65/87 (74%)
Frame = +3
Query: 3 LIEMEPRNSGNYTLLSNIYAASGMWHEVGAVRKTMRDKGVKKMPGGSSIEVNNRVHEFIS 182
L E++P N+GNY LLSNIYAA+G W+ VG +RK M+DKG+K+ PG S IE NRVH FI+
Sbjct: 73 LFELQPENAGNYVLLSNIYAAAGEWYNVGKIRKIMKDKGLKRSPGCSWIEHKNRVHTFIA 132
Query: 183 GDKSHPHLERIYEVLSEINEQSKMAGY 263
GD+SHP +E+I E L + + + AGY
Sbjct: 133 GDRSHPQIEKISETLESLAGKMEAAGY 159
>gb|AFG55306.1| hypothetical protein 0_14503_01, partial [Pinus taeda]
Length = 160
Score = 108 bits (269), Expect = 1e-21
Identities = 49/87 (56%), Positives = 64/87 (73%)
Frame = +3
Query: 3 LIEMEPRNSGNYTLLSNIYAASGMWHEVGAVRKTMRDKGVKKMPGGSSIEVNNRVHEFIS 182
L E++P N+GNY LLSNIYAA+G W VG +RK M+DKG+K+ PG S IE NRVH FI+
Sbjct: 73 LFELQPENAGNYVLLSNIYAAAGKWDNVGKIRKIMKDKGLKRSPGCSWIEHKNRVHTFIA 132
Query: 183 GDKSHPHLERIYEVLSEINEQSKMAGY 263
GD+SHP +E+I E L + + + AGY
Sbjct: 133 GDRSHPQIEKISETLESLAGKMEAAGY 159
>gb|AFG55300.1| hypothetical protein 0_14503_01, partial [Pinus taeda]
Length = 160
Score = 107 bits (268), Expect = 1e-21
Identities = 49/87 (56%), Positives = 64/87 (73%)
Frame = +3
Query: 3 LIEMEPRNSGNYTLLSNIYAASGMWHEVGAVRKTMRDKGVKKMPGGSSIEVNNRVHEFIS 182
L E++P N+GNY LLSNIYAA+G W VG +RK M+DKG+K+ PG S IE NRVH FI+
Sbjct: 73 LFELQPENAGNYVLLSNIYAAAGEWDNVGKIRKIMKDKGLKRSPGCSWIEHKNRVHTFIA 132
Query: 183 GDKSHPHLERIYEVLSEINEQSKMAGY 263
GD+SHP +E+I E L + + + AGY
Sbjct: 133 GDRSHPQIEKISETLESLAGKMEAAGY 159
>gb|AEW07918.1| hypothetical protein 0_14503_01, partial [Pinus radiata]
gi|383147104|gb|AFG55296.1| hypothetical protein
0_14503_01, partial [Pinus taeda]
gi|383147108|gb|AFG55298.1| hypothetical protein
0_14503_01, partial [Pinus taeda]
gi|383147110|gb|AFG55299.1| hypothetical protein
0_14503_01, partial [Pinus taeda]
gi|383147114|gb|AFG55301.1| hypothetical protein
0_14503_01, partial [Pinus taeda]
gi|383147118|gb|AFG55303.1| hypothetical protein
0_14503_01, partial [Pinus taeda]
gi|383147120|gb|AFG55304.1| hypothetical protein
0_14503_01, partial [Pinus taeda]
gi|383147122|gb|AFG55305.1| hypothetical protein
0_14503_01, partial [Pinus taeda]
gi|383147126|gb|AFG55307.1| hypothetical protein
0_14503_01, partial [Pinus taeda]
gi|383147128|gb|AFG55308.1| hypothetical protein
0_14503_01, partial [Pinus taeda]
gi|383147130|gb|AFG55309.1| hypothetical protein
0_14503_01, partial [Pinus taeda]
gi|383147132|gb|AFG55310.1| hypothetical protein
0_14503_01, partial [Pinus taeda]
gi|383147134|gb|AFG55311.1| hypothetical protein
0_14503_01, partial [Pinus taeda]
gi|383147136|gb|AFG55312.1| hypothetical protein
0_14503_01, partial [Pinus taeda]
Length = 160
Score = 107 bits (268), Expect = 1e-21
Identities = 49/87 (56%), Positives = 64/87 (73%)
Frame = +3
Query: 3 LIEMEPRNSGNYTLLSNIYAASGMWHEVGAVRKTMRDKGVKKMPGGSSIEVNNRVHEFIS 182
L E++P N+GNY LLSNIYAA+G W VG +RK M+DKG+K+ PG S IE NRVH FI+
Sbjct: 73 LFELQPENAGNYVLLSNIYAAAGEWDNVGKIRKIMKDKGLKRSPGCSWIEHKNRVHTFIA 132
Query: 183 GDKSHPHLERIYEVLSEINEQSKMAGY 263
GD+SHP +E+I E L + + + AGY
Sbjct: 133 GDRSHPQIEKISETLESLAGKMEAAGY 159
>dbj|BAD34344.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
Length = 607
Score = 107 bits (266), Expect = 2e-21
Identities = 54/97 (55%), Positives = 67/97 (69%)
Frame = +3
Query: 3 LIEMEPRNSGNYTLLSNIYAASGMWHEVGAVRKTMRDKGVKKMPGGSSIEVNNRVHEFIS 182
LIE P + Y LLSNIYA G W V VRK M D+GV+K+PG SSIE++ +HEFIS
Sbjct: 376 LIEAAPNDHAGYVLLSNIYALDGNWTGVHKVRKLMLDRGVQKVPGSSSIEIDGVIHEFIS 435
Query: 183 GDKSHPHLERIYEVLSEINEQSKMAGYCPEEFSWLLE 293
GDKSH E IYE+LSE+ +Q K+AGY P+ LL+
Sbjct: 436 GDKSHSSKEDIYEMLSEMCQQLKVAGYVPDTSHVLLD 472