BLASTX nr result

ID: Cocculus22_contig00021555 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus22_contig00021555
         (765 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006452831.1| hypothetical protein CICLE_v10009897mg [Citr...   157   3e-36
ref|XP_002532727.1| lsm1, putative [Ricinus communis] gi|2235275...   157   3e-36
ref|XP_006836602.1| hypothetical protein AMTR_s00131p00107350 [A...   157   4e-36
gb|EYU45893.1| hypothetical protein MIMGU_mgv1a016267mg [Mimulus...   156   7e-36
ref|XP_007012604.1| Small nuclear ribonucleoprotein family prote...   156   7e-36
ref|NP_001237465.1| uncharacterized protein LOC100306352 [Glycin...   156   9e-36
ref|XP_004510523.1| PREDICTED: U6 snRNA-associated Sm-like prote...   155   1e-35
ref|XP_006474709.1| PREDICTED: probable U6 snRNA-associated Sm-l...   155   2e-35
ref|XP_006452830.1| hypothetical protein CICLE_v10009897mg [Citr...   155   2e-35
ref|XP_007215150.1| hypothetical protein PRUPE_ppa013348mg [Prun...   155   2e-35
ref|XP_007135420.1| hypothetical protein PHAVU_010G127900g [Phas...   154   3e-35
ref|XP_002271476.1| PREDICTED: U6 snRNA-associated Sm-like prote...   154   3e-35
ref|XP_004287651.1| PREDICTED: U6 snRNA-associated Sm-like prote...   154   3e-35
ref|XP_004303709.1| PREDICTED: U6 snRNA-associated Sm-like prote...   153   6e-35
ref|XP_002516250.1| lsm1, putative [Ricinus communis] gi|2235447...   153   6e-35
gb|EYU21304.1| hypothetical protein MIMGU_mgv1a016277mg [Mimulus...   153   7e-35
ref|XP_002304120.1| small nuclear ribonucleoprotein [Populus tri...   153   7e-35
ref|XP_006298813.1| hypothetical protein CARUB_v10014920mg [Caps...   152   1e-34
ref|XP_006369123.1| small nuclear ribonucleoprotein [Populus tri...   152   1e-34
ref|XP_004510524.1| PREDICTED: U6 snRNA-associated Sm-like prote...   152   2e-34

>ref|XP_006452831.1| hypothetical protein CICLE_v10009897mg [Citrus clementina]
           gi|557556057|gb|ESR66071.1| hypothetical protein
           CICLE_v10009897mg [Citrus clementina]
          Length = 96

 Score =  157 bits (398), Expect = 3e-36
 Identities = 78/95 (82%), Positives = 88/95 (92%)
 Frame = -1

Query: 318 MSWAGVEDIFLSTSLASYLDKKLLVLLRDGRKLMGILRSFDQFANVVLEGACERVIVGDL 139
           MSWAG +D+FLSTSLA+YLDKK+LVLLRDGRKL+G+LRSFDQFANVVLEGACER+IVGDL
Sbjct: 1   MSWAGPDDVFLSTSLATYLDKKILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDL 60

Query: 138 YCDIPLGLYVIRGENVVLIGELV*YPTLYASTTVD 34
           YCDIPLGLYVIRGENVVLIGELV +  +Y S  +D
Sbjct: 61  YCDIPLGLYVIRGENVVLIGELV-HCFVYCSVRLD 94


>ref|XP_002532727.1| lsm1, putative [Ricinus communis] gi|223527535|gb|EEF29658.1| lsm1,
           putative [Ricinus communis]
          Length = 128

 Score =  157 bits (398), Expect = 3e-36
 Identities = 78/82 (95%), Positives = 80/82 (97%)
 Frame = -1

Query: 318 MSWAGVEDIFLSTSLASYLDKKLLVLLRDGRKLMGILRSFDQFANVVLEGACERVIVGDL 139
           MSWAG EDI+LSTSLASYLDKKLLVLLRDGRKLMGILRSFDQFAN VLEGACERVIVGDL
Sbjct: 1   MSWAGPEDIYLSTSLASYLDKKLLVLLRDGRKLMGILRSFDQFANAVLEGACERVIVGDL 60

Query: 138 YCDIPLGLYVIRGENVVLIGEL 73
           YCDIPLGLY+IRGENVVLIGEL
Sbjct: 61  YCDIPLGLYIIRGENVVLIGEL 82


>ref|XP_006836602.1| hypothetical protein AMTR_s00131p00107350 [Amborella trichopoda]
           gi|548839141|gb|ERM99455.1| hypothetical protein
           AMTR_s00131p00107350 [Amborella trichopoda]
          Length = 128

 Score =  157 bits (397), Expect = 4e-36
 Identities = 78/82 (95%), Positives = 80/82 (97%)
 Frame = -1

Query: 318 MSWAGVEDIFLSTSLASYLDKKLLVLLRDGRKLMGILRSFDQFANVVLEGACERVIVGDL 139
           MSWAG EDIFLSTSLASYLDKKLLVLLRDGRKL+GILRSFDQFAN VLEGACERVIVGDL
Sbjct: 1   MSWAGPEDIFLSTSLASYLDKKLLVLLRDGRKLLGILRSFDQFANAVLEGACERVIVGDL 60

Query: 138 YCDIPLGLYVIRGENVVLIGEL 73
           YCD+PLGLYVIRGENVVLIGEL
Sbjct: 61  YCDLPLGLYVIRGENVVLIGEL 82


>gb|EYU45893.1| hypothetical protein MIMGU_mgv1a016267mg [Mimulus guttatus]
          Length = 128

 Score =  156 bits (395), Expect = 7e-36
 Identities = 77/82 (93%), Positives = 80/82 (97%)
 Frame = -1

Query: 318 MSWAGVEDIFLSTSLASYLDKKLLVLLRDGRKLMGILRSFDQFANVVLEGACERVIVGDL 139
           MSWAG ED++LSTSLASYLDKKLLVLLRDGRKL+GILRSFDQFAN VLEGACERVIVGDL
Sbjct: 1   MSWAGPEDVYLSTSLASYLDKKLLVLLRDGRKLLGILRSFDQFANAVLEGACERVIVGDL 60

Query: 138 YCDIPLGLYVIRGENVVLIGEL 73
           YCDIPLGLYVIRGENVVLIGEL
Sbjct: 61  YCDIPLGLYVIRGENVVLIGEL 82


>ref|XP_007012604.1| Small nuclear ribonucleoprotein family protein isoform 1 [Theobroma
           cacao] gi|508782967|gb|EOY30223.1| Small nuclear
           ribonucleoprotein family protein isoform 1 [Theobroma
           cacao]
          Length = 128

 Score =  156 bits (395), Expect = 7e-36
 Identities = 77/82 (93%), Positives = 81/82 (98%)
 Frame = -1

Query: 318 MSWAGVEDIFLSTSLASYLDKKLLVLLRDGRKLMGILRSFDQFANVVLEGACERVIVGDL 139
           MSWAG +DIFLSTSLA+YLDKKLLVLLRDGRKL+G+LRSFDQFANVVLEGACERVIVGDL
Sbjct: 1   MSWAGPDDIFLSTSLATYLDKKLLVLLRDGRKLLGLLRSFDQFANVVLEGACERVIVGDL 60

Query: 138 YCDIPLGLYVIRGENVVLIGEL 73
           YCDIPLGLYVIRGENVVLIGEL
Sbjct: 61  YCDIPLGLYVIRGENVVLIGEL 82


>ref|NP_001237465.1| uncharacterized protein LOC100306352 [Glycine max]
           gi|593266482|ref|XP_007135419.1| hypothetical protein
           PHAVU_010G127800g [Phaseolus vulgaris]
           gi|255628281|gb|ACU14485.1| unknown [Glycine max]
           gi|561008464|gb|ESW07413.1| hypothetical protein
           PHAVU_010G127800g [Phaseolus vulgaris]
          Length = 128

 Score =  156 bits (394), Expect = 9e-36
 Identities = 78/82 (95%), Positives = 79/82 (96%)
 Frame = -1

Query: 318 MSWAGVEDIFLSTSLASYLDKKLLVLLRDGRKLMGILRSFDQFANVVLEGACERVIVGDL 139
           MSWAG EDI+LSTSLASYLDKKLLVLLRDGRKLMG LRSFDQFAN VLEGACERVIVGDL
Sbjct: 1   MSWAGPEDIYLSTSLASYLDKKLLVLLRDGRKLMGTLRSFDQFANAVLEGACERVIVGDL 60

Query: 138 YCDIPLGLYVIRGENVVLIGEL 73
           YCDIPLGLYVIRGENVVLIGEL
Sbjct: 61  YCDIPLGLYVIRGENVVLIGEL 82


>ref|XP_004510523.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm1-like isoform X1
           [Cicer arietinum]
          Length = 128

 Score =  155 bits (392), Expect = 1e-35
 Identities = 76/82 (92%), Positives = 79/82 (96%)
 Frame = -1

Query: 318 MSWAGVEDIFLSTSLASYLDKKLLVLLRDGRKLMGILRSFDQFANVVLEGACERVIVGDL 139
           MSWAG EDI+LSTSLASYLDKKLL+LLRDGRKLMG LRSFDQFAN VLEGACERV+VGDL
Sbjct: 1   MSWAGPEDIYLSTSLASYLDKKLLILLRDGRKLMGTLRSFDQFANAVLEGACERVVVGDL 60

Query: 138 YCDIPLGLYVIRGENVVLIGEL 73
           YCDIPLGLYVIRGENVVLIGEL
Sbjct: 61  YCDIPLGLYVIRGENVVLIGEL 82


>ref|XP_006474709.1| PREDICTED: probable U6 snRNA-associated Sm-like protein LSm1-like
           [Citrus sinensis]
          Length = 128

 Score =  155 bits (391), Expect = 2e-35
 Identities = 74/82 (90%), Positives = 81/82 (98%)
 Frame = -1

Query: 318 MSWAGVEDIFLSTSLASYLDKKLLVLLRDGRKLMGILRSFDQFANVVLEGACERVIVGDL 139
           MSWAG +D+FLSTSLA+YLDKK+LVLLRDGRKL+G+LRSFDQFANVVLEGACER+IVGDL
Sbjct: 1   MSWAGPDDVFLSTSLATYLDKKILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDL 60

Query: 138 YCDIPLGLYVIRGENVVLIGEL 73
           YCDIPLGLYVIRGENVVLIGEL
Sbjct: 61  YCDIPLGLYVIRGENVVLIGEL 82


>ref|XP_006452830.1| hypothetical protein CICLE_v10009897mg [Citrus clementina]
           gi|557556056|gb|ESR66070.1| hypothetical protein
           CICLE_v10009897mg [Citrus clementina]
          Length = 128

 Score =  155 bits (391), Expect = 2e-35
 Identities = 74/82 (90%), Positives = 81/82 (98%)
 Frame = -1

Query: 318 MSWAGVEDIFLSTSLASYLDKKLLVLLRDGRKLMGILRSFDQFANVVLEGACERVIVGDL 139
           MSWAG +D+FLSTSLA+YLDKK+LVLLRDGRKL+G+LRSFDQFANVVLEGACER+IVGDL
Sbjct: 1   MSWAGPDDVFLSTSLATYLDKKILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDL 60

Query: 138 YCDIPLGLYVIRGENVVLIGEL 73
           YCDIPLGLYVIRGENVVLIGEL
Sbjct: 61  YCDIPLGLYVIRGENVVLIGEL 82


>ref|XP_007215150.1| hypothetical protein PRUPE_ppa013348mg [Prunus persica]
           gi|462411300|gb|EMJ16349.1| hypothetical protein
           PRUPE_ppa013348mg [Prunus persica]
          Length = 128

 Score =  155 bits (391), Expect = 2e-35
 Identities = 76/82 (92%), Positives = 80/82 (97%)
 Frame = -1

Query: 318 MSWAGVEDIFLSTSLASYLDKKLLVLLRDGRKLMGILRSFDQFANVVLEGACERVIVGDL 139
           MSWAG ED++LSTSLASYLDKKLLVLLRDGRKL+GILRSFDQFAN VLEGACERVIVG+L
Sbjct: 1   MSWAGPEDVYLSTSLASYLDKKLLVLLRDGRKLLGILRSFDQFANAVLEGACERVIVGEL 60

Query: 138 YCDIPLGLYVIRGENVVLIGEL 73
           YCDIPLGLYVIRGENVVLIGEL
Sbjct: 61  YCDIPLGLYVIRGENVVLIGEL 82


>ref|XP_007135420.1| hypothetical protein PHAVU_010G127900g [Phaseolus vulgaris]
           gi|561008465|gb|ESW07414.1| hypothetical protein
           PHAVU_010G127900g [Phaseolus vulgaris]
          Length = 128

 Score =  154 bits (390), Expect = 3e-35
 Identities = 77/82 (93%), Positives = 79/82 (96%)
 Frame = -1

Query: 318 MSWAGVEDIFLSTSLASYLDKKLLVLLRDGRKLMGILRSFDQFANVVLEGACERVIVGDL 139
           MSWAG EDI+LSTSLASYLDKKLLVLLRDGRKLMG LRSFDQFAN VLEGACERVIVG+L
Sbjct: 1   MSWAGPEDIYLSTSLASYLDKKLLVLLRDGRKLMGTLRSFDQFANAVLEGACERVIVGEL 60

Query: 138 YCDIPLGLYVIRGENVVLIGEL 73
           YCDIPLGLYVIRGENVVLIGEL
Sbjct: 61  YCDIPLGLYVIRGENVVLIGEL 82


>ref|XP_002271476.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm1 [Vitis
           vinifera] gi|147803430|emb|CAN62239.1| hypothetical
           protein VITISV_033727 [Vitis vinifera]
           gi|297742980|emb|CBI35847.3| unnamed protein product
           [Vitis vinifera]
          Length = 128

 Score =  154 bits (390), Expect = 3e-35
 Identities = 77/82 (93%), Positives = 79/82 (96%)
 Frame = -1

Query: 318 MSWAGVEDIFLSTSLASYLDKKLLVLLRDGRKLMGILRSFDQFANVVLEGACERVIVGDL 139
           MSWAG EDI+LSTSLASYLDKKLLVLLRD RKL+GILRSFDQFAN VLEGACERVIVGDL
Sbjct: 1   MSWAGPEDIYLSTSLASYLDKKLLVLLRDNRKLLGILRSFDQFANAVLEGACERVIVGDL 60

Query: 138 YCDIPLGLYVIRGENVVLIGEL 73
           YCDIPLGLYVIRGENVVLIGEL
Sbjct: 61  YCDIPLGLYVIRGENVVLIGEL 82


>ref|XP_004287651.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm1-like [Fragaria
           vesca subsp. vesca]
          Length = 128

 Score =  154 bits (389), Expect = 3e-35
 Identities = 77/82 (93%), Positives = 79/82 (96%)
 Frame = -1

Query: 318 MSWAGVEDIFLSTSLASYLDKKLLVLLRDGRKLMGILRSFDQFANVVLEGACERVIVGDL 139
           MSWAG ED  LSTSLASYLDKKLLVLLRDGRKL+G+LRSFDQFANVVLEGACERVIVGDL
Sbjct: 1   MSWAGPEDSLLSTSLASYLDKKLLVLLRDGRKLLGLLRSFDQFANVVLEGACERVIVGDL 60

Query: 138 YCDIPLGLYVIRGENVVLIGEL 73
           YCDIPLGLYVIRGENVVLIGEL
Sbjct: 61  YCDIPLGLYVIRGENVVLIGEL 82


>ref|XP_004303709.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm1-like [Fragaria
           vesca subsp. vesca]
          Length = 128

 Score =  153 bits (387), Expect = 6e-35
 Identities = 74/82 (90%), Positives = 80/82 (97%)
 Frame = -1

Query: 318 MSWAGVEDIFLSTSLASYLDKKLLVLLRDGRKLMGILRSFDQFANVVLEGACERVIVGDL 139
           MSWAG ED++LSTSLASYLDKK+LVLLRDGRKL+GILRSFDQFAN VLEGACERVIVG+L
Sbjct: 1   MSWAGPEDVYLSTSLASYLDKKILVLLRDGRKLLGILRSFDQFANAVLEGACERVIVGEL 60

Query: 138 YCDIPLGLYVIRGENVVLIGEL 73
           YCD+PLGLYVIRGENVVLIGEL
Sbjct: 61  YCDLPLGLYVIRGENVVLIGEL 82


>ref|XP_002516250.1| lsm1, putative [Ricinus communis] gi|223544736|gb|EEF46252.1| lsm1,
           putative [Ricinus communis]
          Length = 128

 Score =  153 bits (387), Expect = 6e-35
 Identities = 77/82 (93%), Positives = 80/82 (97%)
 Frame = -1

Query: 318 MSWAGVEDIFLSTSLASYLDKKLLVLLRDGRKLMGILRSFDQFANVVLEGACERVIVGDL 139
           MSWAG +DIFLSTSLA+YLDKKLLVLLRDGRKL+GILRSFDQFANVVLEGACERVIVGDL
Sbjct: 1   MSWAGPDDIFLSTSLATYLDKKLLVLLRDGRKLLGILRSFDQFANVVLEGACERVIVGDL 60

Query: 138 YCDIPLGLYVIRGENVVLIGEL 73
           YCDI LGLYVIRGENVVLIGEL
Sbjct: 61  YCDILLGLYVIRGENVVLIGEL 82


>gb|EYU21304.1| hypothetical protein MIMGU_mgv1a016277mg [Mimulus guttatus]
          Length = 128

 Score =  153 bits (386), Expect = 7e-35
 Identities = 75/82 (91%), Positives = 79/82 (96%)
 Frame = -1

Query: 318 MSWAGVEDIFLSTSLASYLDKKLLVLLRDGRKLMGILRSFDQFANVVLEGACERVIVGDL 139
           MSWAG ED++ STSLASYLDKKLLVLLRDGRKL+GILRSFDQFAN VLEGACERVIVG+L
Sbjct: 1   MSWAGPEDVYTSTSLASYLDKKLLVLLRDGRKLLGILRSFDQFANAVLEGACERVIVGEL 60

Query: 138 YCDIPLGLYVIRGENVVLIGEL 73
           YCDIPLGLYVIRGENVVLIGEL
Sbjct: 61  YCDIPLGLYVIRGENVVLIGEL 82


>ref|XP_002304120.1| small nuclear ribonucleoprotein [Populus trichocarpa]
           gi|222841552|gb|EEE79099.1| small nuclear
           ribonucleoprotein [Populus trichocarpa]
          Length = 128

 Score =  153 bits (386), Expect = 7e-35
 Identities = 77/82 (93%), Positives = 78/82 (95%)
 Frame = -1

Query: 318 MSWAGVEDIFLSTSLASYLDKKLLVLLRDGRKLMGILRSFDQFANVVLEGACERVIVGDL 139
           MSWAG EDI+LSTSLASYLDKKLLVLLRDGRKLMGILRSFDQFAN VLEGACER IVGDL
Sbjct: 1   MSWAGPEDIYLSTSLASYLDKKLLVLLRDGRKLMGILRSFDQFANAVLEGACERAIVGDL 60

Query: 138 YCDIPLGLYVIRGENVVLIGEL 73
           YCDI LGLYVIRGENVVLIGEL
Sbjct: 61  YCDIHLGLYVIRGENVVLIGEL 82


>ref|XP_006298813.1| hypothetical protein CARUB_v10014920mg [Capsella rubella]
           gi|482567522|gb|EOA31711.1| hypothetical protein
           CARUB_v10014920mg [Capsella rubella]
          Length = 107

 Score =  152 bits (385), Expect = 1e-34
 Identities = 76/83 (91%), Positives = 79/83 (95%)
 Frame = -1

Query: 318 MSWAGVEDIFLSTSLASYLDKKLLVLLRDGRKLMGILRSFDQFANVVLEGACERVIVGDL 139
           MSWAG EDI+LSTSLASYLD+KLLVLLRDGRKLMG LRSFDQFAN VLEGACERVIVG+ 
Sbjct: 1   MSWAGPEDIYLSTSLASYLDRKLLVLLRDGRKLMGTLRSFDQFANAVLEGACERVIVGEQ 60

Query: 138 YCDIPLGLYVIRGENVVLIGELV 70
           YCDIPLGLYVIRGENVVLIGELV
Sbjct: 61  YCDIPLGLYVIRGENVVLIGELV 83


>ref|XP_006369123.1| small nuclear ribonucleoprotein [Populus trichocarpa]
           gi|118489961|gb|ABK96777.1| unknown [Populus trichocarpa
           x Populus deltoides] gi|550347483|gb|ERP65692.1| small
           nuclear ribonucleoprotein [Populus trichocarpa]
          Length = 128

 Score =  152 bits (385), Expect = 1e-34
 Identities = 76/82 (92%), Positives = 79/82 (96%)
 Frame = -1

Query: 318 MSWAGVEDIFLSTSLASYLDKKLLVLLRDGRKLMGILRSFDQFANVVLEGACERVIVGDL 139
           MSWAG EDI+LSTSLA+YLDKKLLVLLRDGRKLMG+LRSFDQFAN VLEGACERVIVGDL
Sbjct: 1   MSWAGPEDIYLSTSLANYLDKKLLVLLRDGRKLMGLLRSFDQFANAVLEGACERVIVGDL 60

Query: 138 YCDIPLGLYVIRGENVVLIGEL 73
           YCDI LGLYVIRGENVVLIGEL
Sbjct: 61  YCDIHLGLYVIRGENVVLIGEL 82


>ref|XP_004510524.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm1-like isoform X2
           [Cicer arietinum]
          Length = 122

 Score =  152 bits (383), Expect = 2e-34
 Identities = 74/80 (92%), Positives = 77/80 (96%)
 Frame = -1

Query: 318 MSWAGVEDIFLSTSLASYLDKKLLVLLRDGRKLMGILRSFDQFANVVLEGACERVIVGDL 139
           MSWAG EDI+LSTSLASYLDKKLL+LLRDGRKLMG LRSFDQFAN VLEGACERV+VGDL
Sbjct: 1   MSWAGPEDIYLSTSLASYLDKKLLILLRDGRKLMGTLRSFDQFANAVLEGACERVVVGDL 60

Query: 138 YCDIPLGLYVIRGENVVLIG 79
           YCDIPLGLYVIRGENVVLIG
Sbjct: 61  YCDIPLGLYVIRGENVVLIG 80


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