BLASTX nr result
ID: Cocculus22_contig00021553
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus22_contig00021553
(326 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAG50806.1|AC079281_8 unknown protein [Arabidopsis thaliana] 77 2e-18
emb|CCA65979.1| hypothetical protein [Beta vulgaris subsp. vulga... 81 4e-18
ref|YP_004222309.1| hypothetical protein BevumaM_p074 [Beta vulg... 81 8e-18
dbj|BAA97290.1| non-LTR retroelement reverse transcriptase-like ... 75 2e-17
dbj|BAF01687.1| hypothetical protein [Arabidopsis thaliana] 75 2e-17
gb|AAD21699.1| Contains reverse transcriptase domain (rvt) PF|00... 75 4e-17
gb|ABD33261.1| RNA-directed DNA polymerase (Reverse transcriptas... 78 8e-17
ref|XP_004253224.1| PREDICTED: uncharacterized protein LOC101268... 78 1e-16
emb|CAB72467.1| putative protein [Arabidopsis thaliana] 75 5e-16
emb|CAA18234.1| putative protein [Arabidopsis thaliana] gi|72694... 68 1e-15
dbj|BAB01845.1| non-LTR retroelement reverse transcriptase-like ... 68 1e-15
emb|CAA66812.1| non-ltr retrotransposon reverse transcriptase-li... 68 1e-15
gb|ABD96948.1| hypothetical protein [Cleome spinosa] 70 1e-15
gb|AAC33226.1| putative non-LTR retroelement reverse transcripta... 74 2e-15
emb|CCA65981.1| hypothetical protein [Beta vulgaris subsp. vulga... 75 2e-15
gb|AAF99785.1|AC012463_2 T2E6.4 [Arabidopsis thaliana] 75 3e-15
gb|AAD15471.1| putative non-LTR retroelement reverse transcripta... 75 4e-15
emb|CAN82456.1| hypothetical protein VITISV_010028 [Vitis vinifera] 64 5e-15
emb|CAN77850.1| hypothetical protein VITISV_020834 [Vitis vinifera] 64 5e-15
gb|AAC28221.1| similar to reverse transcriptases (PFam: rvt.hmm,... 69 5e-15
>gb|AAG50806.1|AC079281_8 unknown protein [Arabidopsis thaliana]
Length = 1213
Score = 77.4 bits (189), Expect(2) = 2e-18
Identities = 33/76 (43%), Positives = 51/76 (67%)
Frame = +1
Query: 7 SAFIRGRSIVDDIVLAQDLVKGFQRKDHPPTMAVKVDLRKAYGSVEWNFLFWVMEEMRFP 186
SAF+ GRS+ ++++LA DLV G+ + P +KVDL+KA+ SV W F+ + + P
Sbjct: 557 SAFLPGRSLAENVLLATDLVHGYNWSNISPRGMLKVDLKKAFDSVRWEFVIAALRALAIP 616
Query: 187 KVFIDWTKQCVTTPTF 234
+ FI+W QC++TPTF
Sbjct: 617 EKFINWISQCISTPTF 632
Score = 40.4 bits (93), Expect(2) = 2e-18
Identities = 16/19 (84%), Positives = 19/19 (100%)
Frame = +2
Query: 266 FFKSSRGLRQGDPMSPYLF 322
FFKS++GLRQGDP+SPYLF
Sbjct: 643 FFKSTKGLRQGDPLSPYLF 661
>emb|CCA65979.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
Length = 1110
Score = 80.9 bits (198), Expect(2) = 4e-18
Identities = 37/79 (46%), Positives = 53/79 (67%)
Frame = +1
Query: 7 SAFIRGRSIVDDIVLAQDLVKGFQRKDHPPTMAVKVDLRKAYGSVEWNFLFWVMEEMRFP 186
S FI GR I D+I+LA +L++G+ RK P +KVD+RKAY SVEW+FL ++ E FP
Sbjct: 548 SGFIPGRHIADNILLASELIRGYTRKHMSPRCIMKVDIRKAYDSVEWSFLETLLYEFGFP 607
Query: 187 KVFIDWTKQCVTTPTFFCL 243
F+ W +CV+T ++ L
Sbjct: 608 SRFVGWIMECVSTVSYSVL 626
Score = 35.8 bits (81), Expect(2) = 4e-18
Identities = 14/22 (63%), Positives = 19/22 (86%)
Frame = +2
Query: 257 PVRFFKSSRGLRQGDPMSPYLF 322
P + F++ +GLRQGDPMSP+LF
Sbjct: 631 PTQPFQARKGLRQGDPMSPFLF 652
>ref|YP_004222309.1| hypothetical protein BevumaM_p074 [Beta vulgaris subsp. maritima]
gi|346683183|ref|YP_004842114.1| hypothetical protein
BemaM_p069 [Beta macrocarpa]
gi|319439824|emb|CBX33299.1| hypothetical protein [Beta
vulgaris subsp. maritima] gi|345500101|emb|CBX24919.1|
hypothetical protein [Beta macrocarpa]
Length = 238
Score = 81.3 bits (199), Expect(2) = 8e-18
Identities = 37/79 (46%), Positives = 54/79 (68%)
Frame = +1
Query: 7 SAFIRGRSIVDDIVLAQDLVKGFQRKDHPPTMAVKVDLRKAYGSVEWNFLFWVMEEMRFP 186
+ FI G+ I D+I+LA +L+KG+ +K P +KVDLRKAY S+EW+FL ++ E+ FP
Sbjct: 14 AGFIPGKHIGDNILLATELIKGYSQKAVSPRCMIKVDLRKAYDSIEWSFLQCMLSELGFP 73
Query: 187 KVFIDWTKQCVTTPTFFCL 243
FI W +CVTT ++ L
Sbjct: 74 SQFITWIMECVTTVSYSIL 92
Score = 34.7 bits (78), Expect(2) = 8e-18
Identities = 14/22 (63%), Positives = 17/22 (77%)
Frame = +2
Query: 257 PVRFFKSSRGLRQGDPMSPYLF 322
P F S +G+RQGDPMSP+LF
Sbjct: 97 PTTPFPSKKGVRQGDPMSPFLF 118
>dbj|BAA97290.1| non-LTR retroelement reverse transcriptase-like [Arabidopsis
thaliana]
Length = 1072
Score = 75.1 bits (183), Expect(2) = 2e-17
Identities = 31/76 (40%), Positives = 53/76 (69%)
Frame = +1
Query: 7 SAFIRGRSIVDDIVLAQDLVKGFQRKDHPPTMAVKVDLRKAYGSVEWNFLFWVMEEMRFP 186
SAF+ GRS+ ++++LA ++V G+ R + P +KVDL+KA+ SV+W F+ + + P
Sbjct: 417 SAFLPGRSLAENVLLATEMVHGYNRLNISPRGMLKVDLKKAFDSVKWEFVTAALRALAIP 476
Query: 187 KVFIDWTKQCVTTPTF 234
+ +I+W QC+TTP+F
Sbjct: 477 ERYINWIHQCITTPSF 492
Score = 39.3 bits (90), Expect(2) = 2e-17
Identities = 15/19 (78%), Positives = 19/19 (100%)
Frame = +2
Query: 266 FFKSSRGLRQGDPMSPYLF 322
FF+S++GLRQGDP+SPYLF
Sbjct: 503 FFRSTKGLRQGDPLSPYLF 521
>dbj|BAF01687.1| hypothetical protein [Arabidopsis thaliana]
Length = 1072
Score = 75.1 bits (183), Expect(2) = 2e-17
Identities = 31/76 (40%), Positives = 53/76 (69%)
Frame = +1
Query: 7 SAFIRGRSIVDDIVLAQDLVKGFQRKDHPPTMAVKVDLRKAYGSVEWNFLFWVMEEMRFP 186
SAF+ GRS+ ++++LA ++V G+ R + P +KVDL+KA+ SV+W F+ + + P
Sbjct: 417 SAFLPGRSLAENVLLATEMVHGYNRLNISPRGMLKVDLKKAFDSVKWEFVTAALRALAIP 476
Query: 187 KVFIDWTKQCVTTPTF 234
+ +I+W QC+TTP+F
Sbjct: 477 ERYINWIHQCITTPSF 492
Score = 39.3 bits (90), Expect(2) = 2e-17
Identities = 15/19 (78%), Positives = 19/19 (100%)
Frame = +2
Query: 266 FFKSSRGLRQGDPMSPYLF 322
FF+S++GLRQGDP+SPYLF
Sbjct: 503 FFRSTKGLRQGDPLSPYLF 521
>gb|AAD21699.1| Contains reverse transcriptase domain (rvt) PF|00078 [Arabidopsis
thaliana]
Length = 1253
Score = 75.5 bits (184), Expect(2) = 4e-17
Identities = 31/76 (40%), Positives = 53/76 (69%)
Frame = +1
Query: 7 SAFIRGRSIVDDIVLAQDLVKGFQRKDHPPTMAVKVDLRKAYGSVEWNFLFWVMEEMRFP 186
SAF+ GR + ++++LA +LV+G+ R++ P +KVDLRKA+ S+ W+F+ ++ + P
Sbjct: 510 SAFLPGRFLAENVLLATELVQGYNRQNIDPRGMLKVDLRKAFDSIRWDFIISALKAIGIP 569
Query: 187 KVFIDWTKQCVTTPTF 234
F+ W QC++TPTF
Sbjct: 570 DRFVYWITQCISTPTF 585
Score = 38.1 bits (87), Expect(2) = 4e-17
Identities = 15/19 (78%), Positives = 19/19 (100%)
Frame = +2
Query: 266 FFKSSRGLRQGDPMSPYLF 322
FFKS+RGLRQG+P+SP+LF
Sbjct: 596 FFKSTRGLRQGNPLSPFLF 614
>gb|ABD33261.1| RNA-directed DNA polymerase (Reverse transcriptase) [Medicago
truncatula]
Length = 402
Score = 78.2 bits (191), Expect(2) = 8e-17
Identities = 35/76 (46%), Positives = 52/76 (68%)
Frame = +1
Query: 7 SAFIRGRSIVDDIVLAQDLVKGFQRKDHPPTMAVKVDLRKAYGSVEWNFLFWVMEEMRFP 186
SAF++GR I D+I+L+ +LVK + RK P VK+DL+KAY SVEW F+ +M E+ F
Sbjct: 231 SAFVKGRVIFDNIILSHELVKSYSRKGISPRCMVKIDLQKAYNSVEWPFIKHLMLELGFS 290
Query: 187 KVFIDWTKQCVTTPTF 234
F++W C+TT ++
Sbjct: 291 YKFVNWVMGCLTTASY 306
Score = 34.3 bits (77), Expect(2) = 8e-17
Identities = 14/20 (70%), Positives = 17/20 (85%)
Frame = +2
Query: 263 RFFKSSRGLRQGDPMSPYLF 322
R F + +GLRQGDP+SPYLF
Sbjct: 316 RPFAAKKGLRQGDPISPYLF 335
>ref|XP_004253224.1| PREDICTED: uncharacterized protein LOC101268376 [Solanum
lycopersicum]
Length = 717
Score = 77.8 bits (190), Expect(2) = 1e-16
Identities = 37/76 (48%), Positives = 49/76 (64%)
Frame = +1
Query: 7 SAFIRGRSIVDDIVLAQDLVKGFQRKDHPPTMAVKVDLRKAYGSVEWNFLFWVMEEMRFP 186
+ FI GR I D+I+LA +LVK + RK+ P +K+DL KAY SVEW FL VME + FP
Sbjct: 356 AGFIPGRKIGDNIILAHELVKAYTRKNVSPRCMLKIDLHKAYDSVEWPFLEQVMEGLGFP 415
Query: 187 KVFIDWTKQCVTTPTF 234
+F W +CV T +
Sbjct: 416 DLFTKWVMKCVKTVNY 431
Score = 34.3 bits (77), Expect(2) = 1e-16
Identities = 13/18 (72%), Positives = 17/18 (94%)
Frame = +2
Query: 269 FKSSRGLRQGDPMSPYLF 322
F +++GLRQGDPMSP+LF
Sbjct: 443 FDAAKGLRQGDPMSPFLF 460
>emb|CAB72467.1| putative protein [Arabidopsis thaliana]
Length = 762
Score = 75.1 bits (183), Expect(2) = 5e-16
Identities = 30/76 (39%), Positives = 52/76 (68%)
Frame = +1
Query: 7 SAFIRGRSIVDDIVLAQDLVKGFQRKDHPPTMAVKVDLRKAYGSVEWNFLFWVMEEMRFP 186
S+F++ R ++++++LA DLVK + + A+K+D+ KA SV+W+FL + M FP
Sbjct: 116 SSFVKDRLLIENVLLATDLVKDYHKDSISERCAIKIDISKASDSVQWSFLINTLTAMHFP 175
Query: 187 KVFIDWTKQCVTTPTF 234
++FI W + C+TTP+F
Sbjct: 176 EMFIHWIRLCITTPSF 191
Score = 34.7 bits (78), Expect(2) = 5e-16
Identities = 15/19 (78%), Positives = 17/19 (89%)
Frame = +2
Query: 266 FFKSSRGLRQGDPMSPYLF 322
FF+SSRGLRQG +SPYLF
Sbjct: 202 FFQSSRGLRQGCALSPYLF 220
>emb|CAA18234.1| putative protein [Arabidopsis thaliana] gi|7269488|emb|CAB79491.1|
putative protein [Arabidopsis thaliana]
Length = 1141
Score = 68.2 bits (165), Expect(2) = 1e-15
Identities = 30/76 (39%), Positives = 49/76 (64%)
Frame = +1
Query: 7 SAFIRGRSIVDDIVLAQDLVKGFQRKDHPPTMAVKVDLRKAYGSVEWNFLFWVMEEMRFP 186
SAF+ GR + ++++LA ++V G+ ++ +KVDLRKA+ SV W F+ + + P
Sbjct: 535 SAFLPGRLLAENVLLATEMVHGYNWRNISLRGMLKVDLRKAFDSVRWEFIIAALLALGVP 594
Query: 187 KVFIDWTKQCVTTPTF 234
FI+W QC++TPTF
Sbjct: 595 TKFINWIHQCISTPTF 610
Score = 40.4 bits (93), Expect(2) = 1e-15
Identities = 16/19 (84%), Positives = 19/19 (100%)
Frame = +2
Query: 266 FFKSSRGLRQGDPMSPYLF 322
FFKS++GLRQGDP+SPYLF
Sbjct: 621 FFKSAKGLRQGDPLSPYLF 639
>dbj|BAB01845.1| non-LTR retroelement reverse transcriptase-like protein
[Arabidopsis thaliana]
Length = 893
Score = 67.8 bits (164), Expect(2) = 1e-15
Identities = 29/76 (38%), Positives = 48/76 (63%)
Frame = +1
Query: 7 SAFIRGRSIVDDIVLAQDLVKGFQRKDHPPTMAVKVDLRKAYGSVEWNFLFWVMEEMRFP 186
SAF+ GR + ++++LA ++V G+ K+ +KVDLRKA+ SV W+F+ + P
Sbjct: 558 SAFLPGRLLSENVLLATEIVHGYNTKNISSRGMLKVDLRKAFDSVRWDFIISAFRALAVP 617
Query: 187 KVFIDWTKQCVTTPTF 234
+ F+ W QC++TP F
Sbjct: 618 EKFVCWINQCISTPYF 633
Score = 40.4 bits (93), Expect(2) = 1e-15
Identities = 16/19 (84%), Positives = 19/19 (100%)
Frame = +2
Query: 266 FFKSSRGLRQGDPMSPYLF 322
FFKS++GLRQGDP+SPYLF
Sbjct: 644 FFKSNKGLRQGDPLSPYLF 662
>emb|CAA66812.1| non-ltr retrotransposon reverse transcriptase-like protein
[Arabidopsis thaliana]
Length = 893
Score = 67.8 bits (164), Expect(2) = 1e-15
Identities = 29/76 (38%), Positives = 48/76 (63%)
Frame = +1
Query: 7 SAFIRGRSIVDDIVLAQDLVKGFQRKDHPPTMAVKVDLRKAYGSVEWNFLFWVMEEMRFP 186
SAF+ GR + ++++LA ++V G+ K+ +KVDLRKA+ SV W+F+ + P
Sbjct: 558 SAFLPGRLLSENVLLATEIVHGYNTKNISSRGMLKVDLRKAFDSVRWDFIISAFRALAVP 617
Query: 187 KVFIDWTKQCVTTPTF 234
+ F+ W QC++TP F
Sbjct: 618 EKFVCWINQCISTPYF 633
Score = 40.4 bits (93), Expect(2) = 1e-15
Identities = 16/19 (84%), Positives = 19/19 (100%)
Frame = +2
Query: 266 FFKSSRGLRQGDPMSPYLF 322
FFKS++GLRQGDP+SPYLF
Sbjct: 644 FFKSNKGLRQGDPLSPYLF 662
>gb|ABD96948.1| hypothetical protein [Cleome spinosa]
Length = 539
Score = 70.1 bits (170), Expect(2) = 1e-15
Identities = 28/75 (37%), Positives = 48/75 (64%)
Frame = +1
Query: 10 AFIRGRSIVDDIVLAQDLVKGFQRKDHPPTMAVKVDLRKAYGSVEWNFLFWVMEEMRFPK 189
AF+ GR +V++++LA +LV + R + +K+DLRKA+ +V W F+ +M+ + P+
Sbjct: 11 AFLEGRLMVENVLLATELVHEYNRPNTSKRAMLKIDLRKAFDTVSWEFITKIMQALNLPR 70
Query: 190 VFIDWTKQCVTTPTF 234
F+ W K C+ TP F
Sbjct: 71 TFVTWVKVCMETPKF 85
Score = 38.1 bits (87), Expect(2) = 1e-15
Identities = 15/19 (78%), Positives = 17/19 (89%)
Frame = +2
Query: 266 FFKSSRGLRQGDPMSPYLF 322
+FK RGLRQGDP+SPYLF
Sbjct: 96 YFKGRRGLRQGDPLSPYLF 114
>gb|AAC33226.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1529
Score = 74.3 bits (181), Expect(2) = 2e-15
Identities = 30/76 (39%), Positives = 52/76 (68%)
Frame = +1
Query: 7 SAFIRGRSIVDDIVLAQDLVKGFQRKDHPPTMAVKVDLRKAYGSVEWNFLFWVMEEMRFP 186
SAF++ R ++++++LA +LVK + ++ P A+K+D+ KA+ SV+W FL +E + FP
Sbjct: 860 SAFVKERLLMENVLLATELVKDYHKESVTPRCAMKIDISKAFDSVQWQFLLNTLEALNFP 919
Query: 187 KVFIDWTKQCVTTPTF 234
+ F W K C++T TF
Sbjct: 920 ETFRHWIKLCISTATF 935
Score = 33.5 bits (75), Expect(2) = 2e-15
Identities = 15/19 (78%), Positives = 16/19 (84%)
Frame = +2
Query: 266 FFKSSRGLRQGDPMSPYLF 322
FF SSRGLRQG +SPYLF
Sbjct: 946 FFGSSRGLRQGCALSPYLF 964
>emb|CCA65981.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
Length = 1114
Score = 74.7 bits (182), Expect(2) = 2e-15
Identities = 35/79 (44%), Positives = 52/79 (65%)
Frame = +1
Query: 7 SAFIRGRSIVDDIVLAQDLVKGFQRKDHPPTMAVKVDLRKAYGSVEWNFLFWVMEEMRFP 186
+ FI R I D+I+LA +L++G+ R+ P +KVD+RKAY SVEW FL +++E+ FP
Sbjct: 551 TGFIPERHIGDNILLATELIRGYNRRHVSPRCVIKVDIRKAYDSVEWVFLESMLKELGFP 610
Query: 187 KVFIDWTKQCVTTPTFFCL 243
+FI W CV T ++ L
Sbjct: 611 SMFIRWIMACVKTVSYSIL 629
Score = 32.7 bits (73), Expect(2) = 2e-15
Identities = 12/18 (66%), Positives = 16/18 (88%)
Frame = +2
Query: 269 FKSSRGLRQGDPMSPYLF 322
F + +GLRQGDP+SP+LF
Sbjct: 638 FDAQKGLRQGDPLSPFLF 655
>gb|AAF99785.1|AC012463_2 T2E6.4 [Arabidopsis thaliana]
Length = 740
Score = 75.1 bits (183), Expect(2) = 3e-15
Identities = 31/76 (40%), Positives = 51/76 (67%)
Frame = +1
Query: 7 SAFIRGRSIVDDIVLAQDLVKGFQRKDHPPTMAVKVDLRKAYGSVEWNFLFWVMEEMRFP 186
SAF+R R ++++++LA +LVK + + P A+K+D+ KA+ SV+W FL +E + FP
Sbjct: 136 SAFVRERLLIENVLLATELVKDYHKDSISPRCAMKIDISKAFDSVQWQFLLNTLEALNFP 195
Query: 187 KVFIDWTKQCVTTPTF 234
+ F W K C++T TF
Sbjct: 196 ENFCHWIKLCISTATF 211
Score = 32.0 bits (71), Expect(2) = 3e-15
Identities = 14/19 (73%), Positives = 15/19 (78%)
Frame = +2
Query: 266 FFKSSRGLRQGDPMSPYLF 322
FF S RGLRQG +SPYLF
Sbjct: 222 FFGSKRGLRQGCALSPYLF 240
>gb|AAD15471.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1277
Score = 74.7 bits (182), Expect(2) = 4e-15
Identities = 31/76 (40%), Positives = 52/76 (68%)
Frame = +1
Query: 7 SAFIRGRSIVDDIVLAQDLVKGFQRKDHPPTMAVKVDLRKAYGSVEWNFLFWVMEEMRFP 186
SAF+R R ++++++LA +LVK + + P A+K+D+ KA+ SV+W FL +E ++FP
Sbjct: 705 SAFVRERLLMENVLLATELVKDYHKDSISPRCAMKIDISKAFDSVQWQFLLNTLEALKFP 764
Query: 187 KVFIDWTKQCVTTPTF 234
+ F W K C++T TF
Sbjct: 765 EKFRHWIKLCISTATF 780
Score = 32.0 bits (71), Expect(2) = 4e-15
Identities = 14/19 (73%), Positives = 15/19 (78%)
Frame = +2
Query: 266 FFKSSRGLRQGDPMSPYLF 322
FF S RGLRQG +SPYLF
Sbjct: 791 FFGSKRGLRQGCALSPYLF 809
>emb|CAN82456.1| hypothetical protein VITISV_010028 [Vitis vinifera]
Length = 4128
Score = 63.5 bits (153), Expect(2) = 5e-15
Identities = 30/78 (38%), Positives = 49/78 (62%)
Frame = +1
Query: 10 AFIRGRSIVDDIVLAQDLVKGFQRKDHPPTMAVKVDLRKAYGSVEWNFLFWVMEEMRFPK 189
AF+ GR I+D +++A + + + KD+ P + +K+D+ KA+ V WNFL VM +M F
Sbjct: 2950 AFVHGRQILDXVLIANEALDS-RLKDNIPGLLLKMDIEKAFDHVNWNFLMEVMSKMGFGH 3008
Query: 190 VFIDWTKQCVTTPTFFCL 243
+I+W K C +T +F L
Sbjct: 3009 RWINWIKWCCSTTSFSIL 3026
Score = 42.7 bits (99), Expect(2) = 5e-15
Identities = 18/22 (81%), Positives = 20/22 (90%)
Frame = +2
Query: 257 PVRFFKSSRGLRQGDPMSPYLF 322
P FF+SSRGLRQGDP+SPYLF
Sbjct: 3031 PSGFFRSSRGLRQGDPLSPYLF 3052
Score = 54.3 bits (129), Expect(2) = 6e-12
Identities = 28/78 (35%), Positives = 46/78 (58%)
Frame = +1
Query: 10 AFIRGRSIVDDIVLAQDLVKGFQRKDHPPTMAVKVDLRKAYGSVEWNFLFWVMEEMRFPK 189
AFIR R I+D ++A + V + K + P + +K+D+ KA+ V W+ L VM +M F +
Sbjct: 1256 AFIRNRQILDAALIANETVDS-RLKVNIPGLLLKLDIEKAFDHVNWDCLVSVMSKMGFGQ 1314
Query: 190 VFIDWTKQCVTTPTFFCL 243
+I+W C++T F L
Sbjct: 1315 KWINWISWCISTTNFSIL 1332
Score = 41.6 bits (96), Expect(2) = 6e-12
Identities = 17/22 (77%), Positives = 20/22 (90%)
Frame = +2
Query: 257 PVRFFKSSRGLRQGDPMSPYLF 322
P FF+S+RGLRQGDP+SPYLF
Sbjct: 1337 PSDFFRSTRGLRQGDPLSPYLF 1358
>emb|CAN77850.1| hypothetical protein VITISV_020834 [Vitis vinifera]
Length = 1905
Score = 63.5 bits (153), Expect(2) = 5e-15
Identities = 30/78 (38%), Positives = 49/78 (62%)
Frame = +1
Query: 10 AFIRGRSIVDDIVLAQDLVKGFQRKDHPPTMAVKVDLRKAYGSVEWNFLFWVMEEMRFPK 189
AF+ GR I+D +++A + + + KD+ P + +K+D+ KA+ V WNFL VM +M F
Sbjct: 1238 AFVHGRQILDAVLIANEALDS-RLKDNIPGLLLKMDIEKAFAHVNWNFLLEVMSKMGFGH 1296
Query: 190 VFIDWTKQCVTTPTFFCL 243
+I+W K C +T +F L
Sbjct: 1297 RWINWIKWCCSTASFSIL 1314
Score = 42.7 bits (99), Expect(2) = 5e-15
Identities = 18/22 (81%), Positives = 20/22 (90%)
Frame = +2
Query: 257 PVRFFKSSRGLRQGDPMSPYLF 322
P FF+SSRGLRQGDP+SPYLF
Sbjct: 1319 PSGFFRSSRGLRQGDPLSPYLF 1340
>gb|AAC28221.1| similar to reverse transcriptases (PFam: rvt.hmm, score: 60.13)
[Arabidopsis thaliana]
Length = 1164
Score = 68.9 bits (167), Expect(2) = 5e-15
Identities = 29/76 (38%), Positives = 51/76 (67%)
Frame = +1
Query: 7 SAFIRGRSIVDDIVLAQDLVKGFQRKDHPPTMAVKVDLRKAYGSVEWNFLFWVMEEMRFP 186
SAF+ GR +++++LA +LV G+ +K+ P+ +KVDLRKA+ SV W+F+ + + P
Sbjct: 454 SAFMPGRLFLENVLLATELVHGYNKKNIAPSSMLKVDLRKAFDSVRWDFIVSALRALNVP 513
Query: 187 KVFIDWTKQCVTTPTF 234
+ F W +C++T +F
Sbjct: 514 EKFTCWILECLSTASF 529
Score = 37.4 bits (85), Expect(2) = 5e-15
Identities = 16/18 (88%), Positives = 17/18 (94%)
Frame = +2
Query: 269 FKSSRGLRQGDPMSPYLF 322
F SS+GLRQGDPMSPYLF
Sbjct: 541 FWSSKGLRQGDPMSPYLF 558