BLASTX nr result

ID: Cocculus22_contig00021552 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus22_contig00021552
         (566 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_007034984.1| Zinc knuckle family protein, putative isofor...    64   4e-08
ref|XP_006489529.1| PREDICTED: dentin sialophosphoprotein-like i...    59   9e-07
ref|XP_006489524.1| PREDICTED: dentin sialophosphoprotein-like i...    59   9e-07
gb|EXB29868.1| RuBisCO large subunit-binding protein subunit alp...    59   1e-06
ref|XP_006420121.1| hypothetical protein CICLE_v10004215mg [Citr...    57   3e-06

>ref|XP_007034984.1| Zinc knuckle family protein, putative isoform 1 [Theobroma cacao]
           gi|590658913|ref|XP_007034985.1| Zinc knuckle family
           protein, putative isoform 1 [Theobroma cacao]
           gi|508714013|gb|EOY05910.1| Zinc knuckle family protein,
           putative isoform 1 [Theobroma cacao]
           gi|508714014|gb|EOY05911.1| Zinc knuckle family protein,
           putative isoform 1 [Theobroma cacao]
          Length = 1087

 Score = 63.5 bits (153), Expect = 4e-08
 Identities = 49/181 (27%), Positives = 87/181 (48%), Gaps = 17/181 (9%)
 Frame = +3

Query: 3   DRNKKPITELGVTTDSGCHCVQGRLXXXXXXXXXXXXXXXMRLVTTNSLSELVWSPHKGL 182
           + N +P+T+LG+      + +Q RL               M  VTT+ LSELVWSPH G 
Sbjct: 5   NENIEPVTDLGLALGYSSYSIQRRLSNDLGAGANAASRIDMTFVTTDPLSELVWSPHNGP 64

Query: 183 RVKCANCSIGD-------------VMLPPSQSCTIRETNNEDMAVDKEGPSSS-QTALRF 320
            +KC +C   D             V+L P Q  T    +++D  +D+E  ++S  T+   
Sbjct: 65  SLKCTDCCFSDKKQSLVWGAGPSNVILSPQQINT-SSRSSDDKPIDEENLNTSISTSHDM 123

Query: 321 DCQVSDKVNLVRSSSDPTGIRSIC---KTISLEEILGLSRDMEVLTKKMEQSVMHIIKDD 491
           + +V+   N  +S  D  GIR +C   +T +   + G +  +E ++ K  +   ++++++
Sbjct: 124 NTKVAHIDNSDKSVRDNDGIR-LCHEQQTDNDNSLQGTAGFLEEISTKGGEPQQNLMENN 182

Query: 492 D 494
           D
Sbjct: 183 D 183


>ref|XP_006489529.1| PREDICTED: dentin sialophosphoprotein-like isoform X6 [Citrus
           sinensis]
          Length = 1040

 Score = 58.9 bits (141), Expect = 9e-07
 Identities = 42/117 (35%), Positives = 54/117 (46%), Gaps = 14/117 (11%)
 Frame = +3

Query: 3   DRNKKPITELGVTTDSGCHCVQGRLXXXXXXXXXXXXXXXMRLVTTNSLSELVWSPHKGL 182
           + N +P+T+LG+       CVQ RL               M+ V TN LSELVWS   GL
Sbjct: 5   NENIEPVTDLGLALGYSSQCVQRRLNSDSGAGANAGLRIDMKFVATNPLSELVWSSRNGL 64

Query: 183 RVKCANCSIGD-------------VMLPPSQS-CTIRETNNEDMAVDKEGPSSSQTA 311
            +KCA+ S  D             V+L PSQ  C  R +N  D  V++E    SQ A
Sbjct: 65  SLKCADSSFVDKKSYLILGAGPSNVVLSPSQEVCAGRSSN--DKPVNEENFIMSQDA 119


>ref|XP_006489524.1| PREDICTED: dentin sialophosphoprotein-like isoform X1 [Citrus
           sinensis] gi|568872744|ref|XP_006489525.1| PREDICTED:
           dentin sialophosphoprotein-like isoform X2 [Citrus
           sinensis] gi|568872746|ref|XP_006489526.1| PREDICTED:
           dentin sialophosphoprotein-like isoform X3 [Citrus
           sinensis] gi|568872748|ref|XP_006489527.1| PREDICTED:
           dentin sialophosphoprotein-like isoform X4 [Citrus
           sinensis]
          Length = 1086

 Score = 58.9 bits (141), Expect = 9e-07
 Identities = 42/117 (35%), Positives = 54/117 (46%), Gaps = 14/117 (11%)
 Frame = +3

Query: 3   DRNKKPITELGVTTDSGCHCVQGRLXXXXXXXXXXXXXXXMRLVTTNSLSELVWSPHKGL 182
           + N +P+T+LG+       CVQ RL               M+ V TN LSELVWS   GL
Sbjct: 5   NENIEPVTDLGLALGYSSQCVQRRLNSDSGAGANAGLRIDMKFVATNPLSELVWSSRNGL 64

Query: 183 RVKCANCSIGD-------------VMLPPSQS-CTIRETNNEDMAVDKEGPSSSQTA 311
            +KCA+ S  D             V+L PSQ  C  R +N  D  V++E    SQ A
Sbjct: 65  SLKCADSSFVDKKSYLILGAGPSNVVLSPSQEVCAGRSSN--DKPVNEENFIMSQDA 119


>gb|EXB29868.1| RuBisCO large subunit-binding protein subunit alpha [Morus
           notabilis]
          Length = 1599

 Score = 58.5 bits (140), Expect = 1e-06
 Identities = 35/96 (36%), Positives = 44/96 (45%), Gaps = 13/96 (13%)
 Frame = +3

Query: 3   DRNKKPITELGVTTDSGCHCVQGRLXXXXXXXXXXXXXXXMRLVTTNSLSELVWSPHKGL 182
           + N +P T+LG+       CV+ RL               M  V  N LSELVWSPHKGL
Sbjct: 5   NENIEPSTDLGLALGYSSQCVKRRLNNGSGAGANAGSGLNMTFVAQNPLSELVWSPHKGL 64

Query: 183 RVKCANCSIGD-------------VMLPPSQSCTIR 251
            +KCA+ S+ D             V L P Q  T+R
Sbjct: 65  NLKCADSSLADSKTSLFWGAGPSNVALLPVQGITVR 100


>ref|XP_006420121.1| hypothetical protein CICLE_v10004215mg [Citrus clementina]
           gi|567854004|ref|XP_006420122.1| hypothetical protein
           CICLE_v10004215mg [Citrus clementina]
           gi|567854006|ref|XP_006420123.1| hypothetical protein
           CICLE_v10004215mg [Citrus clementina]
           gi|557521994|gb|ESR33361.1| hypothetical protein
           CICLE_v10004215mg [Citrus clementina]
           gi|557521995|gb|ESR33362.1| hypothetical protein
           CICLE_v10004215mg [Citrus clementina]
           gi|557521996|gb|ESR33363.1| hypothetical protein
           CICLE_v10004215mg [Citrus clementina]
          Length = 1093

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 41/117 (35%), Positives = 53/117 (45%), Gaps = 14/117 (11%)
 Frame = +3

Query: 3   DRNKKPITELGVTTDSGCHCVQGRLXXXXXXXXXXXXXXXMRLVTTNSLSELVWSPHKGL 182
           + N +P+T+LG+       CVQ RL               M+ V  N LSELVWS   GL
Sbjct: 8   NENIEPVTDLGLALGYSSQCVQRRLNSDSGAGANAGSRIDMKFVAANPLSELVWSSRNGL 67

Query: 183 RVKCANCSIGD-------------VMLPPSQS-CTIRETNNEDMAVDKEGPSSSQTA 311
            +KCA+ S  D             V+L PSQ  C  R +N  D  V++E    SQ A
Sbjct: 68  SLKCADSSFVDKKSYLILGAGPSNVVLSPSQEVCAGRSSN--DKPVNEENFIMSQDA 122


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