BLASTX nr result

ID: Cocculus22_contig00021551 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus22_contig00021551
         (829 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004236239.1| PREDICTED: pentatricopeptide repeat-containi...    59   3e-06
ref|XP_006465271.1| PREDICTED: pentatricopeptide repeat-containi...    58   5e-06
ref|XP_006427518.1| hypothetical protein CICLE_v100269242mg, par...    58   5e-06
ref|XP_006344442.1| PREDICTED: pentatricopeptide repeat-containi...    57   6e-06
ref|XP_007226356.1| hypothetical protein PRUPE_ppa022331mg [Prun...    57   8e-06

>ref|XP_004236239.1| PREDICTED: pentatricopeptide repeat-containing protein At1g80550,
           mitochondrial-like [Solanum lycopersicum]
          Length = 467

 Score = 58.5 bits (140), Expect = 3e-06
 Identities = 28/35 (80%), Positives = 30/35 (85%)
 Frame = +2

Query: 2   GMIDMARKYDEEMLARGLSAKPRRELGTKHESNGC 106
           GM+DMARKYDEEMLA+GLSAKPR ELGTK  S  C
Sbjct: 430 GMVDMARKYDEEMLAKGLSAKPRVELGTKLTSADC 464


>ref|XP_006465271.1| PREDICTED: pentatricopeptide repeat-containing protein At1g80550,
           mitochondrial-like [Citrus sinensis]
          Length = 455

 Score = 57.8 bits (138), Expect = 5e-06
 Identities = 28/40 (70%), Positives = 31/40 (77%)
 Frame = +2

Query: 2   GMIDMARKYDEEMLARGLSAKPRRELGTKHESNGCNDECS 121
           GM+DMARKYDEEM A+GLSAKPR ELGTK    G + E S
Sbjct: 415 GMLDMARKYDEEMFAKGLSAKPREELGTKLVQGGLDGEQS 454


>ref|XP_006427518.1| hypothetical protein CICLE_v100269242mg, partial [Citrus
           clementina] gi|557529508|gb|ESR40758.1| hypothetical
           protein CICLE_v100269242mg, partial [Citrus clementina]
          Length = 290

 Score = 57.8 bits (138), Expect = 5e-06
 Identities = 28/40 (70%), Positives = 31/40 (77%)
 Frame = +2

Query: 2   GMIDMARKYDEEMLARGLSAKPRRELGTKHESNGCNDECS 121
           GM+DMARKYDEEM A+GLSAKPR ELGTK    G + E S
Sbjct: 250 GMLDMARKYDEEMFAKGLSAKPREELGTKLVQGGLDGEQS 289


>ref|XP_006344442.1| PREDICTED: pentatricopeptide repeat-containing protein At1g80550,
           mitochondrial-like [Solanum tuberosum]
          Length = 467

 Score = 57.4 bits (137), Expect = 6e-06
 Identities = 27/35 (77%), Positives = 30/35 (85%)
 Frame = +2

Query: 2   GMIDMARKYDEEMLARGLSAKPRRELGTKHESNGC 106
           GM+DMARKYDEEMLA+GLSAKPR ELGTK  +  C
Sbjct: 430 GMVDMARKYDEEMLAKGLSAKPRVELGTKLTTPDC 464


>ref|XP_007226356.1| hypothetical protein PRUPE_ppa022331mg [Prunus persica]
           gi|462423292|gb|EMJ27555.1| hypothetical protein
           PRUPE_ppa022331mg [Prunus persica]
          Length = 455

 Score = 57.0 bits (136), Expect = 8e-06
 Identities = 27/37 (72%), Positives = 32/37 (86%)
 Frame = +2

Query: 2   GMIDMARKYDEEMLARGLSAKPRRELGTKHESNGCND 112
           GM+DMAR+YDEEMLA+GLSAKPR ELGTK  S+  +D
Sbjct: 418 GMLDMARQYDEEMLAKGLSAKPREELGTKLVSSESDD 454


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