BLASTX nr result
ID: Cocculus22_contig00021479
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus22_contig00021479
(392 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006853442.1| hypothetical protein AMTR_s00032p00179900 [A... 72 6e-11
gb|EXC24764.1| Cytochrome c6 [Morus notabilis] 72 1e-10
ref|XP_006487479.1| PREDICTED: cytochrome c6, chloroplastic-like... 69 9e-10
ref|XP_006468460.1| PREDICTED: cytochrome c6, chloroplastic-like... 65 7e-09
ref|XP_006468459.1| PREDICTED: cytochrome c6, chloroplastic-like... 65 7e-09
ref|XP_006448718.1| hypothetical protein CICLE_v10017084mg [Citr... 65 1e-08
ref|XP_002277599.2| PREDICTED: cytochrome c6, chloroplastic isof... 64 2e-08
ref|XP_003631239.1| PREDICTED: cytochrome c6, chloroplastic isof... 64 2e-08
emb|CAN61634.1| hypothetical protein VITISV_008455 [Vitis vinifera] 64 2e-08
ref|XP_006374698.1| hypothetical protein POPTR_0015s15410g [Popu... 64 2e-08
ref|XP_007024929.1| Cytochrome c [Theobroma cacao] gi|508780295|... 64 3e-08
gb|AFK45176.1| unknown [Lotus japonicus] 64 3e-08
ref|XP_002863535.1| cytochrome c6 [Arabidopsis lyrata subsp. lyr... 62 6e-08
ref|XP_006362590.1| PREDICTED: cytochrome c6, chloroplastic-like... 62 8e-08
ref|XP_006279704.1| hypothetical protein CARUB_v10027233mg [Caps... 62 8e-08
ref|NP_568640.1| cytochrome c6 [Arabidopsis thaliana] gi|2780545... 62 1e-07
ref|XP_007212230.1| hypothetical protein PRUPE_ppa013384mg [Prun... 62 1e-07
dbj|BAB10887.1| unnamed protein product [Arabidopsis thaliana] 62 1e-07
ref|XP_002865286.1| electron transporter protein [Arabidopsis ly... 62 1e-07
ref|XP_006582859.1| PREDICTED: uncharacterized protein LOC100500... 61 2e-07
>ref|XP_006853442.1| hypothetical protein AMTR_s00032p00179900 [Amborella trichopoda]
gi|548857095|gb|ERN14909.1| hypothetical protein
AMTR_s00032p00179900 [Amborella trichopoda]
Length = 200
Score = 72.4 bits (176), Expect = 6e-11
Identities = 37/77 (48%), Positives = 50/77 (64%)
Frame = +3
Query: 66 VSLGQVMDTQRGAALFRKACIGCHDGGGNIIQPVSVISTLQTHKIYVHILFIKLKFFTNL 245
VS QV + +GAALF+KACIGCHDGGGN +QPVS + +++ + + + +
Sbjct: 60 VSWVQVGEVHKGAALFQKACIGCHDGGGNFLQPVSSYTPQCNFILFLELSMLLYCCSSLM 119
Query: 246 YLL*GATLFLKDLQRYG 296
+L GATLF KDLQR G
Sbjct: 120 WLFQGATLFTKDLQRNG 136
>gb|EXC24764.1| Cytochrome c6 [Morus notabilis]
Length = 198
Score = 71.6 bits (174), Expect = 1e-10
Identities = 41/78 (52%), Positives = 43/78 (55%)
Frame = +3
Query: 63 AVSLGQVMDTQRGAALFRKACIGCHDGGGNIIQPVSVISTLQTHKIYVHILFIKLKFFTN 242
A SLGQ +D QRGA+LFRKACIGCHDGGGNIIQP
Sbjct: 87 ADSLGQTIDVQRGASLFRKACIGCHDGGGNIIQP-------------------------- 120
Query: 243 LYLL*GATLFLKDLQRYG 296
GATLFLKDLQR G
Sbjct: 121 -----GATLFLKDLQRNG 133
>ref|XP_006487479.1| PREDICTED: cytochrome c6, chloroplastic-like [Citrus sinensis]
gi|568868385|ref|XP_006487480.1| PREDICTED: cytochrome
c6, chloroplastic-like [Citrus sinensis]
Length = 172
Score = 68.6 bits (166), Expect = 9e-10
Identities = 38/79 (48%), Positives = 43/79 (54%)
Frame = +3
Query: 60 AAVSLGQVMDTQRGAALFRKACIGCHDGGGNIIQPVSVISTLQTHKIYVHILFIKLKFFT 239
AAVSL Q +D Q+G +LFR+ACIGCHDGGGN+IQP
Sbjct: 60 AAVSLAQTVDIQKGVSLFRQACIGCHDGGGNVIQP------------------------- 94
Query: 240 NLYLL*GATLFLKDLQRYG 296
GATLFLKDLQR G
Sbjct: 95 ------GATLFLKDLQRNG 107
>ref|XP_006468460.1| PREDICTED: cytochrome c6, chloroplastic-like isoform X2 [Citrus
sinensis]
Length = 147
Score = 65.5 bits (158), Expect = 7e-09
Identities = 36/77 (46%), Positives = 41/77 (53%)
Frame = +3
Query: 66 VSLGQVMDTQRGAALFRKACIGCHDGGGNIIQPVSVISTLQTHKIYVHILFIKLKFFTNL 245
VSL Q +D Q+G +LFR+ACIGCHDGGGN+IQP
Sbjct: 37 VSLAQTVDIQKGVSLFRQACIGCHDGGGNVIQP--------------------------- 69
Query: 246 YLL*GATLFLKDLQRYG 296
GATLFLKDLQR G
Sbjct: 70 ----GATLFLKDLQRNG 82
>ref|XP_006468459.1| PREDICTED: cytochrome c6, chloroplastic-like isoform X1 [Citrus
sinensis]
Length = 174
Score = 65.5 bits (158), Expect = 7e-09
Identities = 36/77 (46%), Positives = 41/77 (53%)
Frame = +3
Query: 66 VSLGQVMDTQRGAALFRKACIGCHDGGGNIIQPVSVISTLQTHKIYVHILFIKLKFFTNL 245
VSL Q +D Q+G +LFR+ACIGCHDGGGN+IQP
Sbjct: 64 VSLAQTVDIQKGVSLFRQACIGCHDGGGNVIQP--------------------------- 96
Query: 246 YLL*GATLFLKDLQRYG 296
GATLFLKDLQR G
Sbjct: 97 ----GATLFLKDLQRNG 109
>ref|XP_006448718.1| hypothetical protein CICLE_v10017084mg [Citrus clementina]
gi|557551329|gb|ESR61958.1| hypothetical protein
CICLE_v10017084mg [Citrus clementina]
Length = 147
Score = 65.1 bits (157), Expect = 1e-08
Identities = 36/77 (46%), Positives = 41/77 (53%)
Frame = +3
Query: 66 VSLGQVMDTQRGAALFRKACIGCHDGGGNIIQPVSVISTLQTHKIYVHILFIKLKFFTNL 245
VSL Q +D Q+GA+LFR+ACIGCHDGGGN+IQP
Sbjct: 37 VSLAQAVDIQKGASLFRQACIGCHDGGGNVIQP--------------------------- 69
Query: 246 YLL*GATLFLKDLQRYG 296
GA LFLKDLQR G
Sbjct: 70 ----GAALFLKDLQRNG 82
>ref|XP_002277599.2| PREDICTED: cytochrome c6, chloroplastic isoform 1 [Vitis vinifera]
Length = 167
Score = 64.3 bits (155), Expect = 2e-08
Identities = 38/77 (49%), Positives = 39/77 (50%)
Frame = +3
Query: 66 VSLGQVMDTQRGAALFRKACIGCHDGGGNIIQPVSVISTLQTHKIYVHILFIKLKFFTNL 245
VSL Q D QRGAALF +ACIGCHD GGNIIQP
Sbjct: 57 VSLAQTTDIQRGAALFGRACIGCHDAGGNIIQP--------------------------- 89
Query: 246 YLL*GATLFLKDLQRYG 296
GATLFLKDLQR G
Sbjct: 90 ----GATLFLKDLQRNG 102
>ref|XP_003631239.1| PREDICTED: cytochrome c6, chloroplastic isoform 2 [Vitis vinifera]
gi|297737964|emb|CBI27165.3| unnamed protein product
[Vitis vinifera]
Length = 173
Score = 64.3 bits (155), Expect = 2e-08
Identities = 38/77 (49%), Positives = 39/77 (50%)
Frame = +3
Query: 66 VSLGQVMDTQRGAALFRKACIGCHDGGGNIIQPVSVISTLQTHKIYVHILFIKLKFFTNL 245
VSL Q D QRGAALF +ACIGCHD GGNIIQP
Sbjct: 63 VSLAQTTDIQRGAALFGRACIGCHDAGGNIIQP--------------------------- 95
Query: 246 YLL*GATLFLKDLQRYG 296
GATLFLKDLQR G
Sbjct: 96 ----GATLFLKDLQRNG 108
>emb|CAN61634.1| hypothetical protein VITISV_008455 [Vitis vinifera]
Length = 125
Score = 64.3 bits (155), Expect = 2e-08
Identities = 38/77 (49%), Positives = 39/77 (50%)
Frame = +3
Query: 66 VSLGQVMDTQRGAALFRKACIGCHDGGGNIIQPVSVISTLQTHKIYVHILFIKLKFFTNL 245
VSL Q D QRGAALF +ACIGCHD GGNIIQP
Sbjct: 15 VSLAQTTDIQRGAALFGRACIGCHDAGGNIIQP--------------------------- 47
Query: 246 YLL*GATLFLKDLQRYG 296
GATLFLKDLQR G
Sbjct: 48 ----GATLFLKDLQRNG 60
>ref|XP_006374698.1| hypothetical protein POPTR_0015s15410g [Populus trichocarpa]
gi|550322790|gb|ERP52495.1| hypothetical protein
POPTR_0015s15410g [Populus trichocarpa]
Length = 209
Score = 63.9 bits (154), Expect = 2e-08
Identities = 36/77 (46%), Positives = 39/77 (50%)
Frame = +3
Query: 66 VSLGQVMDTQRGAALFRKACIGCHDGGGNIIQPVSVISTLQTHKIYVHILFIKLKFFTNL 245
VSLGQ +D QRGA+LF + CIGCHD GGNIIQP
Sbjct: 99 VSLGQTLDVQRGASLFSRTCIGCHDAGGNIIQP--------------------------- 131
Query: 246 YLL*GATLFLKDLQRYG 296
GATLF KDLQR G
Sbjct: 132 ----GATLFTKDLQRNG 144
>ref|XP_007024929.1| Cytochrome c [Theobroma cacao] gi|508780295|gb|EOY27551.1|
Cytochrome c [Theobroma cacao]
Length = 172
Score = 63.5 bits (153), Expect = 3e-08
Identities = 36/76 (47%), Positives = 39/76 (51%)
Frame = +3
Query: 69 SLGQVMDTQRGAALFRKACIGCHDGGGNIIQPVSVISTLQTHKIYVHILFIKLKFFTNLY 248
+L Q +D QRGA LFR+ACIGCHDGGGNIIQP
Sbjct: 63 ALAQTVDIQRGATLFRQACIGCHDGGGNIIQP---------------------------- 94
Query: 249 LL*GATLFLKDLQRYG 296
GATLF KDLQR G
Sbjct: 95 ---GATLFTKDLQRNG 107
>gb|AFK45176.1| unknown [Lotus japonicus]
Length = 175
Score = 63.5 bits (153), Expect = 3e-08
Identities = 29/39 (74%), Positives = 31/39 (79%)
Frame = +3
Query: 66 VSLGQVMDTQRGAALFRKACIGCHDGGGNIIQPVSVIST 182
VS GQ +D QRGA LFRKACIGCHD GGNIIQP S + T
Sbjct: 65 VSSGQTIDIQRGATLFRKACIGCHDAGGNIIQPGSTLYT 103
>ref|XP_002863535.1| cytochrome c6 [Arabidopsis lyrata subsp. lyrata]
gi|297309370|gb|EFH39794.1| cytochrome c6 [Arabidopsis
lyrata subsp. lyrata]
Length = 176
Score = 62.4 bits (150), Expect = 6e-08
Identities = 27/38 (71%), Positives = 31/38 (81%)
Frame = +3
Query: 69 SLGQVMDTQRGAALFRKACIGCHDGGGNIIQPVSVIST 182
SLGQ +D QRGA LF +ACIGCHD GGNIIQPV+ + T
Sbjct: 69 SLGQTLDIQRGATLFNRACIGCHDTGGNIIQPVATLFT 106
>ref|XP_006362590.1| PREDICTED: cytochrome c6, chloroplastic-like [Solanum tuberosum]
Length = 181
Score = 62.0 bits (149), Expect = 8e-08
Identities = 36/77 (46%), Positives = 40/77 (51%)
Frame = +3
Query: 66 VSLGQVMDTQRGAALFRKACIGCHDGGGNIIQPVSVISTLQTHKIYVHILFIKLKFFTNL 245
VS+GQ +D Q+GAALF +ACIGCH GGNIIQP
Sbjct: 69 VSVGQTIDVQKGAALFNRACIGCHYEGGNIIQP--------------------------- 101
Query: 246 YLL*GATLFLKDLQRYG 296
GATLFLKDLQR G
Sbjct: 102 ----GATLFLKDLQRNG 114
>ref|XP_006279704.1| hypothetical protein CARUB_v10027233mg [Capsella rubella]
gi|482548408|gb|EOA12602.1| hypothetical protein
CARUB_v10027233mg [Capsella rubella]
Length = 175
Score = 62.0 bits (149), Expect = 8e-08
Identities = 27/38 (71%), Positives = 31/38 (81%)
Frame = +3
Query: 69 SLGQVMDTQRGAALFRKACIGCHDGGGNIIQPVSVIST 182
SLGQ +D QRGA LF +ACIGCHD GGNIIQP + +ST
Sbjct: 68 SLGQTLDIQRGATLFNRACIGCHDTGGNIIQPGATLST 105
>ref|NP_568640.1| cytochrome c6 [Arabidopsis thaliana]
gi|27805454|sp|Q93VA3.1|CYC6_ARATH RecName:
Full=Cytochrome c6, chloroplastic; AltName:
Full=Cytochrome c-552; Short=Atc6; AltName:
Full=Cytochrome c-553; AltName: Full=Cytochrome c553;
AltName: Full=Soluble cytochrome f; Flags: Precursor
gi|13926305|gb|AAK49619.1|AF372903_1 AT5g45040/K21C13_23
[Arabidopsis thaliana] gi|16323250|gb|AAL15359.1|
AT5g45040/K21C13_23 [Arabidopsis thaliana]
gi|19571824|emb|CAD27418.1| c6 type cytochrome
[Arabidopsis thaliana] gi|332007810|gb|AED95193.1|
cytochrome c6 [Arabidopsis thaliana]
Length = 175
Score = 61.6 bits (148), Expect = 1e-07
Identities = 35/76 (46%), Positives = 38/76 (50%)
Frame = +3
Query: 69 SLGQVMDTQRGAALFRKACIGCHDGGGNIIQPVSVISTLQTHKIYVHILFIKLKFFTNLY 248
SLGQ +D QRGA LF +ACIGCHD GGNIIQP
Sbjct: 68 SLGQTLDIQRGATLFNRACIGCHDTGGNIIQP---------------------------- 99
Query: 249 LL*GATLFLKDLQRYG 296
GATLF KDL+R G
Sbjct: 100 ---GATLFTKDLERNG 112
>ref|XP_007212230.1| hypothetical protein PRUPE_ppa013384mg [Prunus persica]
gi|462408095|gb|EMJ13429.1| hypothetical protein
PRUPE_ppa013384mg [Prunus persica]
Length = 126
Score = 61.6 bits (148), Expect = 1e-07
Identities = 35/80 (43%), Positives = 39/80 (48%)
Frame = +3
Query: 57 VAAVSLGQVMDTQRGAALFRKACIGCHDGGGNIIQPVSVISTLQTHKIYVHILFIKLKFF 236
+ VS Q +D Q+GAALFRK CIGCHD GGNIIQP
Sbjct: 13 ITPVSDAQTLDVQKGAALFRKTCIGCHDAGGNIIQP------------------------ 48
Query: 237 TNLYLL*GATLFLKDLQRYG 296
GATLF +DLQR G
Sbjct: 49 -------GATLFTRDLQRNG 61
>dbj|BAB10887.1| unnamed protein product [Arabidopsis thaliana]
Length = 151
Score = 61.6 bits (148), Expect = 1e-07
Identities = 35/76 (46%), Positives = 38/76 (50%)
Frame = +3
Query: 69 SLGQVMDTQRGAALFRKACIGCHDGGGNIIQPVSVISTLQTHKIYVHILFIKLKFFTNLY 248
SLGQ +D QRGA LF +ACIGCHD GGNIIQP
Sbjct: 44 SLGQTLDIQRGATLFNRACIGCHDTGGNIIQP---------------------------- 75
Query: 249 LL*GATLFLKDLQRYG 296
GATLF KDL+R G
Sbjct: 76 ---GATLFTKDLERNG 88
>ref|XP_002865286.1| electron transporter protein [Arabidopsis lyrata subsp. lyrata]
gi|297311121|gb|EFH41545.1| electron transporter protein
[Arabidopsis lyrata subsp. lyrata]
Length = 176
Score = 61.6 bits (148), Expect = 1e-07
Identities = 35/76 (46%), Positives = 38/76 (50%)
Frame = +3
Query: 69 SLGQVMDTQRGAALFRKACIGCHDGGGNIIQPVSVISTLQTHKIYVHILFIKLKFFTNLY 248
SLGQ +D QRGA LF +ACIGCHD GGNIIQP
Sbjct: 69 SLGQTLDIQRGATLFNRACIGCHDTGGNIIQP---------------------------- 100
Query: 249 LL*GATLFLKDLQRYG 296
GATLF KDL+R G
Sbjct: 101 ---GATLFTKDLERNG 113
>ref|XP_006582859.1| PREDICTED: uncharacterized protein LOC100500456 isoform X1 [Glycine
max]
Length = 172
Score = 60.8 bits (146), Expect = 2e-07
Identities = 40/96 (41%), Positives = 45/96 (46%), Gaps = 10/96 (10%)
Frame = +3
Query: 66 VSLGQVMDTQRGAALFRKACIGCHDGGGNIIQPVSVISTLQTHKIYVHILFIKLKFFTNL 245
VS Q +D QRG LFR+ACIGCHD GGNIIQP
Sbjct: 62 VSSAQTVDIQRGTTLFRQACIGCHDAGGNIIQP--------------------------- 94
Query: 246 YLL*GATLFLKDLQR---------YGNSYF-KTRLP 323
GATLF KDLQR YG +Y+ K R+P
Sbjct: 95 ----GATLFAKDLQRNGVDTEEAIYGVTYYGKGRMP 126