BLASTX nr result
ID: Cocculus22_contig00021430
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus22_contig00021430
(314 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AFB73912.1| polyprotein [Citrus sinensis] 160 1e-37
gb|AFB73911.1| polyprotein [Citrus sinensis] 159 4e-37
gb|ACL97383.1| Gag-Pol polyprotein [Medicago truncatula] 155 4e-36
gb|ACL97384.1| Gag-Pol polyprotein [Medicago truncatula] 155 4e-36
dbj|BAD34493.1| Gag-Pol [Ipomoea batatas] 154 1e-35
gb|ACL97385.1| Gag-Pol polyprotein [Medicago truncatula] 153 2e-35
gb|ACL97387.1| Gag-Pol polyprotein [Lotus japonicus] 150 2e-34
gb|ACL97386.1| Gag-Pol polyprotein [Medicago truncatula] 150 2e-34
gb|AFK47227.1| unknown [Lotus japonicus] 140 2e-31
emb|CAJ76058.1| gag protein [Cucumis melo] 122 5e-26
gb|ABA98861.1| retrotransposon protein, putative, Ty1-copia subc... 91 2e-16
gb|ABA96825.1| retrotransposon protein, putative, Ty1-copia subc... 89 6e-16
gb|AAP53866.2| retrotransposon protein, putative, Ty1-copia subc... 85 1e-14
emb|CAN61272.1| hypothetical protein VITISV_039063 [Vitis vinifera] 83 3e-14
emb|CAN72567.1| hypothetical protein VITISV_044177 [Vitis vinifera] 81 1e-13
emb|CAN65222.1| hypothetical protein VITISV_038665 [Vitis vinifera] 81 2e-13
ref|XP_003381524.1| putative integrase core domain protein [Tric... 76 4e-12
gb|EXX55164.1| hypothetical protein RirG_227800 [Rhizophagus irr... 75 9e-12
ref|XP_007038204.1| Transducin/WD40 repeat-like superfamily prot... 75 1e-11
emb|CAJ09951.2| putative gag-pol polyprotein [Citrus sinensis] 74 2e-11
>gb|AFB73912.1| polyprotein [Citrus sinensis]
Length = 1309
Score = 160 bits (406), Expect = 1e-37
Identities = 78/104 (75%), Positives = 93/104 (89%)
Frame = -2
Query: 313 FKIEKFDGSNFSLWKLKIKALLRKENCLAAIGVRPGEITEDNKWEEMESNAIANLHLALA 134
++IEKF+G+NFSLWK+K+KA+LRK NCLAAIG RP EIT+D KW E++SNAI++LHLALA
Sbjct: 5 YEIEKFNGNNFSLWKMKMKAVLRKNNCLAAIGERPMEITDD-KWNEVDSNAISDLHLALA 63
Query: 133 DAVLSSIAEKRTAKEIWDTLNHLYEAKSISNKLFLKRKLYTCRM 2
D VLSS+AEK TAKEIWDTL LYEAKS+ NK+FLKRKLYT RM
Sbjct: 64 DGVLSSVAEKNTAKEIWDTLTKLYEAKSLHNKIFLKRKLYTLRM 107
>gb|AFB73911.1| polyprotein [Citrus sinensis]
Length = 1309
Score = 159 bits (402), Expect = 4e-37
Identities = 77/104 (74%), Positives = 92/104 (88%)
Frame = -2
Query: 313 FKIEKFDGSNFSLWKLKIKALLRKENCLAAIGVRPGEITEDNKWEEMESNAIANLHLALA 134
++IEKF+G+NFSLWK+K+KA+LRK NCLAAIG RP EIT+D KW E++ NAI++LHLALA
Sbjct: 5 YEIEKFNGNNFSLWKMKMKAVLRKNNCLAAIGERPMEITDD-KWNEVDGNAISDLHLALA 63
Query: 133 DAVLSSIAEKRTAKEIWDTLNHLYEAKSISNKLFLKRKLYTCRM 2
D VLSS+AEK TAKEIWDTL LYEAKS+ NK+FLKRKLYT RM
Sbjct: 64 DGVLSSVAEKNTAKEIWDTLTKLYEAKSLHNKIFLKRKLYTLRM 107
>gb|ACL97383.1| Gag-Pol polyprotein [Medicago truncatula]
Length = 1305
Score = 155 bits (393), Expect = 4e-36
Identities = 75/104 (72%), Positives = 91/104 (87%)
Frame = -2
Query: 313 FKIEKFDGSNFSLWKLKIKALLRKENCLAAIGVRPGEITEDNKWEEMESNAIANLHLALA 134
F+IEKF+G NFSLWKLKI+A+LRK+NCL AI RP +IT D KW+EM+ NA+ANLHLA+A
Sbjct: 5 FEIEKFNGRNFSLWKLKIRAILRKDNCLDAIDGRPADIT-DEKWKEMDDNAVANLHLAMA 63
Query: 133 DAVLSSIAEKRTAKEIWDTLNHLYEAKSISNKLFLKRKLYTCRM 2
D+VLSSIAEK+TAKEIWDTL LYE KS+ N++FLKR+LYT RM
Sbjct: 64 DSVLSSIAEKKTAKEIWDTLIKLYEVKSLHNRIFLKRRLYTLRM 107
>gb|ACL97384.1| Gag-Pol polyprotein [Medicago truncatula]
Length = 1305
Score = 155 bits (393), Expect = 4e-36
Identities = 75/104 (72%), Positives = 91/104 (87%)
Frame = -2
Query: 313 FKIEKFDGSNFSLWKLKIKALLRKENCLAAIGVRPGEITEDNKWEEMESNAIANLHLALA 134
F+IEKF+G NFSLWKLKI+A+LRK+NCL AI RP +IT D KW+EM+ NA+ANLHLA+A
Sbjct: 5 FEIEKFNGRNFSLWKLKIRAILRKDNCLDAIDGRPADIT-DEKWKEMDDNAVANLHLAMA 63
Query: 133 DAVLSSIAEKRTAKEIWDTLNHLYEAKSISNKLFLKRKLYTCRM 2
D+VLSSIAEK+TAKEIWDTL LYE KS+ N++FLKR+LYT RM
Sbjct: 64 DSVLSSIAEKKTAKEIWDTLIKLYEVKSLHNRIFLKRRLYTLRM 107
>dbj|BAD34493.1| Gag-Pol [Ipomoea batatas]
Length = 1298
Score = 154 bits (389), Expect = 1e-35
Identities = 72/104 (69%), Positives = 88/104 (84%)
Frame = -2
Query: 313 FKIEKFDGSNFSLWKLKIKALLRKENCLAAIGVRPGEITEDNKWEEMESNAIANLHLALA 134
F+IEKF+G NFSLWKLK+KA+LRK+NCLAAI RP + T+D KW EM +A+A+L+L++A
Sbjct: 5 FEIEKFNGKNFSLWKLKVKAILRKDNCLAAISERPVDFTDDKKWSEMNEDAMADLYLSIA 64
Query: 133 DAVLSSIAEKRTAKEIWDTLNHLYEAKSISNKLFLKRKLYTCRM 2
D VLSSI EK+TA EIWD LN LYEAKS+ NK+FLKRKLYT RM
Sbjct: 65 DGVLSSIEEKKTANEIWDHLNRLYEAKSLHNKIFLKRKLYTLRM 108
>gb|ACL97385.1| Gag-Pol polyprotein [Medicago truncatula]
Length = 1305
Score = 153 bits (387), Expect = 2e-35
Identities = 74/104 (71%), Positives = 90/104 (86%)
Frame = -2
Query: 313 FKIEKFDGSNFSLWKLKIKALLRKENCLAAIGVRPGEITEDNKWEEMESNAIANLHLALA 134
F+IEKF+G FSLWKLKI+A+LRK+NCL AI RP +IT D KW+EM+ NA+ANLHLA+A
Sbjct: 5 FEIEKFNGRKFSLWKLKIRAILRKDNCLDAIDGRPADIT-DEKWKEMDDNAVANLHLAMA 63
Query: 133 DAVLSSIAEKRTAKEIWDTLNHLYEAKSISNKLFLKRKLYTCRM 2
D+VLSSIAEK+TAKEIWDTL LYE KS+ N++FLKR+LYT RM
Sbjct: 64 DSVLSSIAEKKTAKEIWDTLIKLYEVKSLHNRIFLKRRLYTLRM 107
>gb|ACL97387.1| Gag-Pol polyprotein [Lotus japonicus]
Length = 1305
Score = 150 bits (379), Expect = 2e-34
Identities = 73/104 (70%), Positives = 91/104 (87%)
Frame = -2
Query: 313 FKIEKFDGSNFSLWKLKIKALLRKENCLAAIGVRPGEITEDNKWEEMESNAIANLHLALA 134
F+I KF+GSNFSLWKLKIKA+LRK+NCL AI RP +IT+D + +EM+ NA+ANLHLA+A
Sbjct: 5 FEIPKFNGSNFSLWKLKIKAILRKDNCLPAIDGRPADITDDKR-KEMDDNAVANLHLAVA 63
Query: 133 DAVLSSIAEKRTAKEIWDTLNHLYEAKSISNKLFLKRKLYTCRM 2
D+VLSSIAEK+TAK+IWDTL LYE KS+ N++FLKR+LYT RM
Sbjct: 64 DSVLSSIAEKKTAKKIWDTLIQLYEVKSLHNRIFLKRRLYTFRM 107
>gb|ACL97386.1| Gag-Pol polyprotein [Medicago truncatula]
Length = 1305
Score = 150 bits (379), Expect = 2e-34
Identities = 73/104 (70%), Positives = 90/104 (86%)
Frame = -2
Query: 313 FKIEKFDGSNFSLWKLKIKALLRKENCLAAIGVRPGEITEDNKWEEMESNAIANLHLALA 134
F+IEKF+G NFSLWKLKI+A+LRK+NCL AI R +IT D KW+EM+ NA+ANLHLA+A
Sbjct: 5 FEIEKFNGRNFSLWKLKIRAILRKDNCLDAIDGRLADIT-DEKWKEMDDNAVANLHLAMA 63
Query: 133 DAVLSSIAEKRTAKEIWDTLNHLYEAKSISNKLFLKRKLYTCRM 2
D+VLSSIAEK+TAKEIWDTL LYE KS+ N++FLKR+LYT +M
Sbjct: 64 DSVLSSIAEKKTAKEIWDTLIKLYEVKSLHNRIFLKRRLYTLQM 107
>gb|AFK47227.1| unknown [Lotus japonicus]
Length = 107
Score = 140 bits (352), Expect = 2e-31
Identities = 68/99 (68%), Positives = 83/99 (83%)
Frame = -2
Query: 313 FKIEKFDGSNFSLWKLKIKALLRKENCLAAIGVRPGEITEDNKWEEMESNAIANLHLALA 134
F+I KF GSNFSLWKLKIKA+LRK+NCL AI RP +IT+D KW+EM+ NA+ANLHLA+A
Sbjct: 5 FEIPKFSGSNFSLWKLKIKAILRKDNCLPAIDGRPADITDD-KWKEMDDNAVANLHLAVA 63
Query: 133 DAVLSSIAEKRTAKEIWDTLNHLYEAKSISNKLFLKRKL 17
D+VLSSIAEK+TAKEIWDTL LYE KS+ N++ + L
Sbjct: 64 DSVLSSIAEKKTAKEIWDTLIQLYEVKSLHNRILKEETL 102
>emb|CAJ76058.1| gag protein [Cucumis melo]
Length = 122
Score = 122 bits (306), Expect = 5e-26
Identities = 59/82 (71%), Positives = 67/82 (81%)
Frame = -2
Query: 247 RKENCLAAIGVRPGEITEDNKWEEMESNAIANLHLALADAVLSSIAEKRTAKEIWDTLNH 68
RK+NCL AI RP EIT+DNKW EM+ NA+AN+HLAL D VLSSI EK+ AKEIWD L
Sbjct: 3 RKDNCLEAIDKRPAEITDDNKWNEMDGNAMANIHLALVDNVLSSIEEKKIAKEIWDHLIK 62
Query: 67 LYEAKSISNKLFLKRKLYTCRM 2
LYEAKS+ NK+FLKRKLYT RM
Sbjct: 63 LYEAKSLHNKIFLKRKLYTLRM 84
>gb|ABA98861.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 425
Score = 90.5 bits (223), Expect = 2e-16
Identities = 43/105 (40%), Positives = 73/105 (69%), Gaps = 1/105 (0%)
Frame = -2
Query: 313 FKIEKFDGS-NFSLWKLKIKALLRKENCLAAIGVRPGEITEDNKWEEMESNAIANLHLAL 137
F++ KFDG+ NF LW++++K LL ++ A+ E + KWEEM++ A A + L+L
Sbjct: 9 FEVVKFDGTGNFILWQMRLKDLLAQQGISKALEETMPEKMDAGKWEEMKAQAAATIRLSL 68
Query: 136 ADAVLSSIAEKRTAKEIWDTLNHLYEAKSISNKLFLKRKLYTCRM 2
+D+V+ + +++T KEIWD L LY +KS+++KL+LK++LY +M
Sbjct: 69 SDSVMYPVMDEKTPKEIWDKLASLYMSKSLTSKLYLKQQLYGLQM 113
>gb|ABA96825.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 424
Score = 89.0 bits (219), Expect = 6e-16
Identities = 42/105 (40%), Positives = 73/105 (69%), Gaps = 1/105 (0%)
Frame = -2
Query: 313 FKIEKFDGS-NFSLWKLKIKALLRKENCLAAIGVRPGEITEDNKWEEMESNAIANLHLAL 137
F++ KFDG+ NF LW++++K LL ++ A+ E + KWEEM++ A A + L+L
Sbjct: 9 FEVVKFDGTGNFVLWQMRLKDLLAQQGISKALEETMPEKMDAGKWEEMKAQAAATIRLSL 68
Query: 136 ADAVLSSIAEKRTAKEIWDTLNHLYEAKSISNKLFLKRKLYTCRM 2
+D+V+ + +++T+KEIW L LY +KS+++KL+LK++LY +M
Sbjct: 69 SDSVMYQVMDEKTSKEIWVKLTSLYMSKSLTSKLYLKQQLYGLQM 113
>gb|AAP53866.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 415
Score = 84.7 bits (208), Expect = 1e-14
Identities = 39/101 (38%), Positives = 71/101 (70%), Gaps = 1/101 (0%)
Frame = -2
Query: 313 FKIEKFDGS-NFSLWKLKIKALLRKENCLAAIGVRPGEITEDNKWEEMESNAIANLHLAL 137
F++ KFDG+ NF LW++++K LL ++ A+ E + +KW EM++ A A + L+L
Sbjct: 9 FEVVKFDGTGNFVLWQMRLKDLLAQQGISKALQETMPEKIDADKWNEMKAQAAATIRLSL 68
Query: 136 ADAVLSSIAEKRTAKEIWDTLNHLYEAKSISNKLFLKRKLY 14
+D+V+ + ++++ KEIWD L L+ +KS+++KL+LK++LY
Sbjct: 69 SDSVMYQVMDEKSPKEIWDKLASLHMSKSLTSKLYLKQQLY 109
>emb|CAN61272.1| hypothetical protein VITISV_039063 [Vitis vinifera]
Length = 1643
Score = 83.2 bits (204), Expect = 3e-14
Identities = 48/108 (44%), Positives = 72/108 (66%), Gaps = 4/108 (3%)
Frame = -2
Query: 313 FKIEKFDGSN-FSLWKLKIKALLRKENCLAAIGVR---PGEITEDNKWEEMESNAIANLH 146
F++EKF+GSN F+LWKLK+KALL ++ C AI P +T K EE+ S A + +
Sbjct: 413 FEVEKFNGSNDFTLWKLKMKALLVQQKCAQAIEGEEKLPVGLTAAEK-EEVVSRAHSAIL 471
Query: 145 LALADAVLSSIAEKRTAKEIWDTLNHLYEAKSISNKLFLKRKLYTCRM 2
L+LAD VL +A++ TA +W L Y+ KS++N+L+ KR+L+T +M
Sbjct: 472 LSLADEVLREVADETTAVGLWRKLESKYQKKSLTNRLYQKRRLHTLKM 519
>emb|CAN72567.1| hypothetical protein VITISV_044177 [Vitis vinifera]
Length = 950
Score = 81.3 bits (199), Expect = 1e-13
Identities = 47/108 (43%), Positives = 71/108 (65%), Gaps = 4/108 (3%)
Frame = -2
Query: 313 FKIEKFDGSN-FSLWKLKIKALLRKENCLAAIG---VRPGEITEDNKWEEMESNAIANLH 146
F++EKF+GSN F+LWKLK+KALL ++ C AI P +T K EE+ S A + +
Sbjct: 6 FEVEKFNGSNDFTLWKLKMKALLVQQKCAQAIEGEETLPVGLTAVEK-EEVVSRAHSAIL 64
Query: 145 LALADAVLSSIAEKRTAKEIWDTLNHLYEAKSISNKLFLKRKLYTCRM 2
L+LAD VL +A++ TA +W Y+ KS++N+L+ KR+L+T +M
Sbjct: 65 LSLADEVLREVADETTAVGLWRKFESKYQKKSLTNRLYQKRQLHTLKM 112
>emb|CAN65222.1| hypothetical protein VITISV_038665 [Vitis vinifera]
Length = 1562
Score = 80.9 bits (198), Expect = 2e-13
Identities = 47/108 (43%), Positives = 71/108 (65%), Gaps = 4/108 (3%)
Frame = -2
Query: 313 FKIEKFDGSN-FSLWKLKIKALLRKENCLAAIGVR---PGEITEDNKWEEMESNAIANLH 146
F++EKF+GSN F+LWKLK+KALL ++ C AI P +T K EE+ S A + +
Sbjct: 193 FEVEKFNGSNDFTLWKLKMKALLVQQKCAQAIEGEEXLPVGLTAXEK-EEVVSRAHSAIL 251
Query: 145 LALADAVLSSIAEKRTAKEIWDTLNHLYEAKSISNKLFLKRKLYTCRM 2
L+LA VL +A++ TA +W L Y+ KS++N+L+ KR+L+T +M
Sbjct: 252 LSLAXEVLREVADETTAVGLWRKLESKYQKKSLTNRLYQKRRLHTLKM 299
>ref|XP_003381524.1| putative integrase core domain protein [Trichinella spiralis]
gi|316979667|gb|EFV62422.1| putative integrase core
domain protein [Trichinella spiralis]
Length = 1133
Score = 76.3 bits (186), Expect = 4e-12
Identities = 43/102 (42%), Positives = 59/102 (57%), Gaps = 1/102 (0%)
Frame = -2
Query: 307 IEKFDGSNFSLWKLKIKALLRKENCLAAIGV-RPGEITEDNKWEEMESNAIANLHLALAD 131
I K + SN+ LWKLK+K LL ++ + +P I ED W E AIA + L + D
Sbjct: 15 IAKLNSSNYQLWKLKMKVLLMRDGLWDLVSQPKPCPIPED--WSRKECKAIAAICLTVED 72
Query: 130 AVLSSIAEKRTAKEIWDTLNHLYEAKSISNKLFLKRKLYTCR 5
L +A+ TA+E+W TL L+E SI +KL+L RKLY R
Sbjct: 73 DQLIHLAQLETAREMWQTLQRLHERASIGSKLYLMRKLYGMR 114
>gb|EXX55164.1| hypothetical protein RirG_227800 [Rhizophagus irregularis DAOM
197198w]
Length = 518
Score = 75.1 bits (183), Expect = 9e-12
Identities = 38/104 (36%), Positives = 69/104 (66%), Gaps = 2/104 (1%)
Frame = -2
Query: 307 IEKFDGSNFSLWKLKIKALLRKENCLAAIGVRPGEITE--DNKWEEMESNAIANLHLALA 134
IEKF+GS+FS WK++++ALL +++ +G +P ++ + ++ W + A A + L+L
Sbjct: 8 IEKFNGSDFSWWKMQLEALLCQKDLDVVLGDKPEKMEKAAEDAWNSKDKKAKAVITLSLE 67
Query: 133 DAVLSSIAEKRTAKEIWDTLNHLYEAKSISNKLFLKRKLYTCRM 2
+V +I ++ TA+ + D L ++YE S +NK+FL R+L+T RM
Sbjct: 68 RSVAFNIMKETTARGMMDALTNMYEKPSAANKVFLMRELFTTRM 111
>ref|XP_007038204.1| Transducin/WD40 repeat-like superfamily protein [Theobroma cacao]
gi|508775449|gb|EOY22705.1| Transducin/WD40 repeat-like
superfamily protein [Theobroma cacao]
Length = 1029
Score = 74.7 bits (182), Expect = 1e-11
Identities = 38/108 (35%), Positives = 72/108 (66%), Gaps = 4/108 (3%)
Frame = -2
Query: 313 FKIEKFDGSN-FSLWKLKIKALLRKENCLAAIGVR---PGEITEDNKWEEMESNAIANLH 146
++IEKF+G N FSLW++K++ALL ++ L A+ + P +++ K +++ A + +
Sbjct: 130 YEIEKFNGRNDFSLWRVKMRALLVQQGLLKALKGKEHLPSNLSDGEK-DDLMKKAHSVIL 188
Query: 145 LALADAVLSSIAEKRTAKEIWDTLNHLYEAKSISNKLFLKRKLYTCRM 2
LAL+D VL + ++ +A +W L +Y KS++N+L++K++LYT +M
Sbjct: 189 LALSDEVLREVTDEESAAAVWFKLESIYMTKSLTNRLYMKQRLYTLKM 236
>emb|CAJ09951.2| putative gag-pol polyprotein [Citrus sinensis]
Length = 1334
Score = 74.3 bits (181), Expect = 2e-11
Identities = 43/108 (39%), Positives = 70/108 (64%), Gaps = 5/108 (4%)
Frame = -2
Query: 310 KIEKFD-GSNFSLWKLKIKALLRKENCLAAIGVRPGEITE----DNKWEEMESNAIANLH 146
+IEKF G +FSLWKLK+KALL + +A+ E + D+K ++++ A + L
Sbjct: 7 EIEKFTIGGDFSLWKLKMKALLVHQGLESALDEEDLEASTGSGIDDKRRQIQNRAHSTLI 66
Query: 145 LALADAVLSSIAEKRTAKEIWDTLNHLYEAKSISNKLFLKRKLYTCRM 2
L+L D++L I+E++TA IW+ + L KS++++LFLK++LYT M
Sbjct: 67 LSLGDSILREISEEKTALGIWNKVETLCMKKSLAHRLFLKKRLYTFSM 114