BLASTX nr result
ID: Cocculus22_contig00021406
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus22_contig00021406
(435 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002534684.1| conserved hypothetical protein [Ricinus comm... 196 3e-48
emb|CAN71465.1| hypothetical protein VITISV_038986 [Vitis vinifera] 95 6e-36
ref|XP_006388280.1| hypothetical protein POPTR_0248s00200g [Popu... 143 3e-32
ref|XP_002322006.1| hypothetical protein POPTR_0015s01800g [Popu... 138 9e-31
gb|AGC78956.1| hypothetical protein (mitochondrion) [Vicia faba] 82 1e-29
ref|XP_003588265.1| NADH-ubiquinone oxidoreductase chain [Medica... 66 4e-09
ref|XP_003588264.1| hypothetical protein MTR_1g005050 [Medicago ... 64 3e-08
>ref|XP_002534684.1| conserved hypothetical protein [Ricinus communis]
gi|223524768|gb|EEF27698.1| conserved hypothetical
protein [Ricinus communis]
Length = 261
Score = 196 bits (498), Expect = 3e-48
Identities = 101/124 (81%), Positives = 103/124 (83%)
Frame = +2
Query: 62 TKHLXXXXXXXXXXXXLVILTVLSAGAPFHCSSHKLWQLQLAPTGARPARPEWAQRSAPI 241
TKHL LVILTVLSAGAP+ CSSHKLWQLQLA TGARPARPEWA RSAPI
Sbjct: 127 TKHLPAVLAARLTGGALVILTVLSAGAPY-CSSHKLWQLQLATTGARPARPEWAPRSAPI 185
Query: 242 RITLGGLSLLPDLERYYESSVPDSIAAAIWFTGTTNQSHAYVTVIDVSIISDHEDPSRAS 421
RITLGGLSLLPDLERYYESSVPDSIAAAIWFTGTT +SHAYVTV D II DHEDP RAS
Sbjct: 186 RITLGGLSLLPDLERYYESSVPDSIAAAIWFTGTTKKSHAYVTVTDGLIILDHEDPGRAS 245
Query: 422 GFHS 433
GFHS
Sbjct: 246 GFHS 249
>emb|CAN71465.1| hypothetical protein VITISV_038986 [Vitis vinifera]
Length = 564
Score = 95.1 bits (235), Expect(2) = 6e-36
Identities = 47/55 (85%), Positives = 48/55 (87%)
Frame = +2
Query: 257 GLSLLPDLERYYESSVPDSIAAAIWFTGTTNQSHAYVTVIDVSIISDHEDPSRAS 421
GLSLLPDLERYYESSVPDSIAAAIWFTGTT +SHAYVTV D II DHED RAS
Sbjct: 189 GLSLLPDLERYYESSVPDSIAAAIWFTGTTKKSHAYVTVTDGFIILDHEDAGRAS 243
Score = 81.6 bits (200), Expect(2) = 6e-36
Identities = 46/72 (63%), Positives = 46/72 (63%), Gaps = 2/72 (2%)
Frame = +1
Query: 49 GRLAYQALARCSCRPPSGRSARYPYCSLCWGXXXXXXXXXXXXXXRTHGGPP--CEARVG 222
G LAYQALARCSCRPPSGRSARYPY S G GP CEARVG
Sbjct: 121 GLLAYQALARCSCRPPSGRSARYPYFS---GTPPIALAISYGSSSSQPQGPALRCEARVG 177
Query: 223 SAVSPHSNYVRG 258
SAVSPHSNYVRG
Sbjct: 178 SAVSPHSNYVRG 189
Score = 59.7 bits (143), Expect = 4e-07
Identities = 40/73 (54%), Positives = 44/73 (60%), Gaps = 4/73 (5%)
Frame = +3
Query: 3 YLLSVVCPPFVECPARAVGLPSTCPL----LLPPAKRAERXXXXXXXXXGPPSIALAISY 170
YLLSV PFVECPAR GL + L PP+ R+ R G P IALAISY
Sbjct: 105 YLLSV--SPFVECPARFTGLLAYQALARCSCRPPSGRSAR----YPYFSGTPPIALAISY 158
Query: 171 GSSSSHPRGPALR 209
GSSSS P+GPALR
Sbjct: 159 GSSSSQPQGPALR 171
>ref|XP_006388280.1| hypothetical protein POPTR_0248s00200g [Populus trichocarpa]
gi|550309931|gb|ERP47194.1| hypothetical protein
POPTR_0248s00200g [Populus trichocarpa]
Length = 103
Score = 143 bits (360), Expect = 3e-32
Identities = 70/81 (86%), Positives = 72/81 (88%)
Frame = +2
Query: 191 TGARPARPEWAQRSAPIRITLGGLSLLPDLERYYESSVPDSIAAAIWFTGTTNQSHAYVT 370
TG R ARPEWAQRSAPIRITLGGLSLLPDLERYYESSV DSIAAA+WFT TT +SHAYVT
Sbjct: 10 TGTRHARPEWAQRSAPIRITLGGLSLLPDLERYYESSVSDSIAAAVWFTSTTKKSHAYVT 69
Query: 371 VIDVSIISDHEDPSRASGFHS 433
VID II DHEDP RASGFHS
Sbjct: 70 VIDGLIILDHEDPGRASGFHS 90
>ref|XP_002322006.1| hypothetical protein POPTR_0015s01800g [Populus trichocarpa]
gi|222869002|gb|EEF06133.1| hypothetical protein
POPTR_0015s01800g [Populus trichocarpa]
Length = 109
Score = 138 bits (347), Expect = 9e-31
Identities = 70/81 (86%), Positives = 72/81 (88%)
Frame = +2
Query: 191 TGARPARPEWAQRSAPIRITLGGLSLLPDLERYYESSVPDSIAAAIWFTGTTNQSHAYVT 370
TG R ARPEWAQRSAPIRI LGGLSLLPDL+RYYESSVPDSIAAAIWFTGTT +SHAYVT
Sbjct: 10 TGPRHARPEWAQRSAPIRIILGGLSLLPDLKRYYESSVPDSIAAAIWFTGTTKKSHAYVT 69
Query: 371 VIDVSIISDHEDPSRASGFHS 433
VID II DHEDP ASGFHS
Sbjct: 70 VIDGLIILDHEDPG-ASGFHS 89
>gb|AGC78956.1| hypothetical protein (mitochondrion) [Vicia faba]
Length = 101
Score = 82.4 bits (202), Expect(2) = 1e-29
Identities = 40/46 (86%), Positives = 40/46 (86%)
Frame = +2
Query: 110 LVILTVLSAGAPFHCSSHKLWQLQLAPTGARPARPEWAQRSAPIRI 247
LVILTVL AGAP HCSSHKLWQLQL GARPARPEWAQ SAPIRI
Sbjct: 14 LVILTVLYAGAPSHCSSHKLWQLQLETKGARPARPEWAQWSAPIRI 59
Score = 73.6 bits (179), Expect(2) = 1e-29
Identities = 33/39 (84%), Positives = 35/39 (89%)
Frame = +1
Query: 250 VRGSFAFARSREILRVFRPRFHRRGHLVHRYYQSVSCLR 366
++GS AFARSREILRV RPRFHRRGH VHRYYQ VSCLR
Sbjct: 59 IKGSLAFARSREILRVLRPRFHRRGHPVHRYYQKVSCLR 97
>ref|XP_003588265.1| NADH-ubiquinone oxidoreductase chain [Medicago truncatula]
gi|355477313|gb|AES58516.1| NADH-ubiquinone
oxidoreductase chain [Medicago truncatula]
Length = 346
Score = 66.2 bits (160), Expect = 4e-09
Identities = 36/47 (76%), Positives = 38/47 (80%), Gaps = 1/47 (2%)
Frame = -3
Query: 418 RTTGVFVVRDN-TYINNSNVSMRLIGSTGEPDGRGDGIWDGRLVVSL 281
R TGV +DN T N+SNVSMRL GSTGEPDGRGDGIWDG LVVSL
Sbjct: 303 RPTGV---QDNQTISNSSNVSMRLFGSTGEPDGRGDGIWDGGLVVSL 346
>ref|XP_003588264.1| hypothetical protein MTR_1g005050 [Medicago truncatula]
gi|355477312|gb|AES58515.1| hypothetical protein
MTR_1g005050 [Medicago truncatula]
Length = 334
Score = 63.5 bits (153), Expect = 3e-08
Identities = 31/39 (79%), Positives = 32/39 (82%)
Frame = -3
Query: 163 MARAMEGGPSRENSKDNERSARLAGGRSSGQVLGRPTAR 47
MARAM GGP EN KDNERSAR AGGRS GQVLGRPT +
Sbjct: 1 MARAMGGGPGIENCKDNERSARQAGGRSCGQVLGRPTGK 39