BLASTX nr result
ID: Cocculus22_contig00021392
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus22_contig00021392
(364 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAN66576.1| hypothetical protein VITISV_016964 [Vitis vinifera] 82 3e-34
emb|CAN76565.1| hypothetical protein VITISV_010942 [Vitis vinifera] 82 1e-32
emb|CAN66637.1| hypothetical protein VITISV_011340 [Vitis vinifera] 70 3e-32
emb|CAN73567.1| hypothetical protein VITISV_003451 [Vitis vinifera] 69 6e-32
emb|CAN63736.1| hypothetical protein VITISV_037249 [Vitis vinifera] 79 1e-31
gb|AAK70407.1|AF369930_2 pol polyprotein [Citrus x paradisi] 69 4e-30
gb|AAT38766.2| Polyprotein, putative [Solanum demissum] 64 2e-28
emb|CAE04792.1| OSJNBb0018J12.5 [Oryza sativa Japonica Group] 64 3e-27
gb|AAV24814.1| putative polyprotein [Oryza sativa Japonica Group] 64 3e-27
gb|ABA99473.2| retrotransposon protein, putative, Ty1-copia subc... 64 3e-27
gb|ABA94191.1| retrotransposon protein, putative, Ty1-copia subc... 64 3e-27
gb|AAT44162.1| putative polyprotein [Oryza sativa Japonica Group] 62 8e-27
gb|AAL75486.1|AF466202_12 putative Fourf gag/pol protein [Zea mays] 62 8e-27
gb|ABA93525.1| retrotransposon protein, putative, Ty1-copia subc... 64 8e-27
gb|AAG03096.2|AC073405_12 putative polyprotein [Oryza sativa Jap... 64 1e-26
gb|AAN61480.1| Putative polyprotein from transposon TNT [Oryza s... 64 1e-26
gb|ABA99751.1| retrotransposon protein, putative, Ty1-copia subc... 64 1e-26
gb|ABA93737.1| retrotransposon protein, putative, Ty1-copia subc... 64 1e-26
gb|ABF96702.1| retrotransposon protein, putative, Ty1-copia subc... 64 1e-26
gb|ABA96779.1| retrotransposon protein, putative, Ty1-copia subc... 64 1e-26
>emb|CAN66576.1| hypothetical protein VITISV_016964 [Vitis vinifera]
Length = 1316
Score = 81.6 bits (200), Expect(3) = 3e-34
Identities = 37/48 (77%), Positives = 42/48 (87%)
Frame = -2
Query: 297 YIYLLKSKDEALVMFKHYKSEVENQLGKNIKAFRSDRRGEYDAPFDEF 154
Y+YLLKSKDEA+ MFKHYK EVENQL K IKA RSDR GEY++PF+EF
Sbjct: 691 YVYLLKSKDEAIEMFKHYKIEVENQLSKKIKAIRSDRGGEYESPFEEF 738
Score = 60.5 bits (145), Expect(3) = 3e-34
Identities = 30/54 (55%), Positives = 38/54 (70%), Gaps = 5/54 (9%)
Frame = -3
Query: 155 FCQQHGIIHQTTAPYSPRSNGIAERKNQHLLEVGRPIMFSM-HVPKY----IWG 9
FC +HGIIHQT APYSP+SNG+AERKN+ L E+ ++ S H P Y +WG
Sbjct: 738 FCLEHGIIHQTIAPYSPQSNGMAERKNRTLKEMMNAMLLSSGHKPCYKYLKVWG 791
Score = 49.3 bits (116), Expect(3) = 3e-34
Identities = 19/25 (76%), Positives = 23/25 (92%)
Frame = -1
Query: 364 VQSKGGKKYFITFIDDSIRYCYIYI 290
VQ++GGKKYFITFIDD RYCY+Y+
Sbjct: 670 VQTRGGKKYFITFIDDCTRYCYVYL 694
>emb|CAN76565.1| hypothetical protein VITISV_010942 [Vitis vinifera]
Length = 839
Score = 82.4 bits (202), Expect(3) = 1e-32
Identities = 38/50 (76%), Positives = 43/50 (86%)
Frame = -2
Query: 297 YIYLLKSKDEALVMFKHYKSEVENQLGKNIKAFRSDRRGEYDAPFDEFLS 148
Y+YLL+ KDEAL +FKHYK+EVENQL KNIKA +SDR GEYDAPF EF S
Sbjct: 218 YVYLLRRKDEALDVFKHYKNEVENQLSKNIKAIKSDRGGEYDAPFGEFCS 267
Score = 60.1 bits (144), Expect(3) = 1e-32
Identities = 26/51 (50%), Positives = 36/51 (70%)
Frame = -3
Query: 155 FCQQHGIIHQTTAPYSPRSNGIAERKNQHLLEVGRPIMFSMHVPKYIWGDA 3
FC +HGIIHQT APYSP+SN +AE KN L E+ ++ S +P+ +W +A
Sbjct: 265 FCSEHGIIHQTIAPYSPQSNSVAECKNLTLKEMMNAMLISSGLPQNLWREA 315
Score = 43.5 bits (101), Expect(3) = 1e-32
Identities = 17/25 (68%), Positives = 21/25 (84%)
Frame = -1
Query: 364 VQSKGGKKYFITFIDDSIRYCYIYI 290
VQ +GGK+YFITFIDD RY Y+Y+
Sbjct: 197 VQKRGGKRYFITFIDDCTRYYYVYL 221
>emb|CAN66637.1| hypothetical protein VITISV_011340 [Vitis vinifera]
Length = 1316
Score = 70.1 bits (170), Expect(3) = 3e-32
Identities = 29/53 (54%), Positives = 42/53 (79%)
Frame = -3
Query: 161 MNFCQQHGIIHQTTAPYSPRSNGIAERKNQHLLEVGRPIMFSMHVPKYIWGDA 3
++ C QHGIIH+TTAPYSP+SNG+AERKN+ L E+ ++ S +P+ +WG+A
Sbjct: 607 VDICAQHGIIHETTAPYSPQSNGVAERKNRTLKEMMNAMLISSSLPQNMWGEA 659
Score = 67.0 bits (162), Expect(3) = 3e-32
Identities = 31/45 (68%), Positives = 36/45 (80%)
Frame = -2
Query: 297 YIYLLKSKDEALVMFKHYKSEVENQLGKNIKAFRSDRRGEYDAPF 163
Y+YLLKSKDEA+ F YK+EVENQL K IK RSDR GEY++PF
Sbjct: 562 YVYLLKSKDEAIEKFVLYKTEVENQLNKKIKVLRSDRGGEYESPF 606
Score = 47.8 bits (112), Expect(3) = 3e-32
Identities = 17/25 (68%), Positives = 23/25 (92%)
Frame = -1
Query: 364 VQSKGGKKYFITFIDDSIRYCYIYI 290
VQ++GG KYFITF+DDS +YCY+Y+
Sbjct: 541 VQTRGGNKYFITFVDDSTKYCYVYL 565
>emb|CAN73567.1| hypothetical protein VITISV_003451 [Vitis vinifera]
Length = 1277
Score = 68.9 bits (167), Expect(3) = 6e-32
Identities = 28/53 (52%), Positives = 41/53 (77%)
Frame = -3
Query: 161 MNFCQQHGIIHQTTAPYSPRSNGIAERKNQHLLEVGRPIMFSMHVPKYIWGDA 3
++ C QHGIIH+TT PYSP+SNG+AERKN+ L E+ ++ S +P+ +WG+A
Sbjct: 607 VDICAQHGIIHETTTPYSPQSNGVAERKNRTLKEMMNAMLISFSLPQNMWGEA 659
Score = 67.0 bits (162), Expect(3) = 6e-32
Identities = 31/45 (68%), Positives = 36/45 (80%)
Frame = -2
Query: 297 YIYLLKSKDEALVMFKHYKSEVENQLGKNIKAFRSDRRGEYDAPF 163
Y+YLLKSKDEA+ F YK+EVENQL K IK RSDR GEY++PF
Sbjct: 562 YVYLLKSKDEAIEKFVLYKTEVENQLNKKIKVLRSDRGGEYESPF 606
Score = 47.8 bits (112), Expect(3) = 6e-32
Identities = 17/25 (68%), Positives = 23/25 (92%)
Frame = -1
Query: 364 VQSKGGKKYFITFIDDSIRYCYIYI 290
VQ++GG KYFITF+DDS +YCY+Y+
Sbjct: 541 VQTRGGNKYFITFVDDSTKYCYVYL 565
>emb|CAN63736.1| hypothetical protein VITISV_037249 [Vitis vinifera]
Length = 839
Score = 79.0 bits (193), Expect(3) = 1e-31
Identities = 36/50 (72%), Positives = 43/50 (86%)
Frame = -2
Query: 297 YIYLLKSKDEALVMFKHYKSEVENQLGKNIKAFRSDRRGEYDAPFDEFLS 148
Y+YLL+SKDEAL +FKHYK+EVENQL + IKA RSDR G+Y+APF EF S
Sbjct: 359 YVYLLRSKDEALDVFKHYKNEVENQLSRKIKAIRSDRGGKYEAPFGEFCS 408
Score = 54.7 bits (130), Expect(3) = 1e-31
Identities = 24/38 (63%), Positives = 31/38 (81%)
Frame = -3
Query: 155 FCQQHGIIHQTTAPYSPRSNGIAERKNQHLLEVGRPIM 42
FC +HGIIHQTTAPYSP+SNG+A+RK+ L E+ I+
Sbjct: 406 FCSKHGIIHQTTAPYSPQSNGVAKRKSCTLKEMMNNIL 443
Score = 48.9 bits (115), Expect(3) = 1e-31
Identities = 19/25 (76%), Positives = 23/25 (92%)
Frame = -1
Query: 364 VQSKGGKKYFITFIDDSIRYCYIYI 290
VQ++GGK YFITFIDD IRYCY+Y+
Sbjct: 338 VQTRGGKMYFITFIDDCIRYCYVYL 362
>gb|AAK70407.1|AF369930_2 pol polyprotein [Citrus x paradisi]
Length = 701
Score = 68.6 bits (166), Expect(3) = 4e-30
Identities = 30/53 (56%), Positives = 41/53 (77%)
Frame = -3
Query: 161 MNFCQQHGIIHQTTAPYSPRSNGIAERKNQHLLEVGRPIMFSMHVPKYIWGDA 3
M+ C+Q GIIHQ TAPYSP+SNGIAERKN+ L E+ ++ S +P+ +WG+A
Sbjct: 596 MSLCEQSGIIHQVTAPYSPQSNGIAERKNRTLKEMMNAMLISSGLPQNMWGEA 648
Score = 63.2 bits (152), Expect(3) = 4e-30
Identities = 31/45 (68%), Positives = 34/45 (75%)
Frame = -2
Query: 297 YIYLLKSKDEALVMFKHYKSEVENQLGKNIKAFRSDRRGEYDAPF 163
Y+YLLKSKDEAL F YK+EVENQL + IK RSDR GEY PF
Sbjct: 551 YVYLLKSKDEALDKFILYKNEVENQLNRKIKELRSDRGGEYVVPF 595
Score = 45.8 bits (107), Expect(3) = 4e-30
Identities = 16/25 (64%), Positives = 22/25 (88%)
Frame = -1
Query: 364 VQSKGGKKYFITFIDDSIRYCYIYI 290
+Q++GG KYFITFIDD +YCY+Y+
Sbjct: 530 IQTRGGNKYFITFIDDCTKYCYVYL 554
>gb|AAT38766.2| Polyprotein, putative [Solanum demissum]
Length = 1355
Score = 63.9 bits (154), Expect(3) = 2e-28
Identities = 27/54 (50%), Positives = 39/54 (72%)
Frame = -3
Query: 167 LLMNFCQQHGIIHQTTAPYSPRSNGIAERKNQHLLEVGRPIMFSMHVPKYIWGD 6
L C ++GIIHQTTAPY+P+SNG+AERKN+ L E+ ++ S P+ +WG+
Sbjct: 612 LFAEICLEYGIIHQTTAPYTPQSNGLAERKNRTLKEMMNALIISSGSPRNLWGE 665
Score = 62.8 bits (151), Expect(3) = 2e-28
Identities = 30/47 (63%), Positives = 35/47 (74%)
Frame = -2
Query: 297 YIYLLKSKDEALVMFKHYKSEVENQLGKNIKAFRSDRRGEYDAPFDE 157
Y+YLL SKDEA+ FK YK+EVENQL IK RSDR GEY++ F E
Sbjct: 569 YVYLLNSKDEAIDAFKQYKNEVENQLNLKIKMIRSDRGGEYESLFAE 615
Score = 45.4 bits (106), Expect(3) = 2e-28
Identities = 17/23 (73%), Positives = 21/23 (91%)
Frame = -1
Query: 358 SKGGKKYFITFIDDSIRYCYIYI 290
S+GGKKYFITFIDD R+CY+Y+
Sbjct: 550 SRGGKKYFITFIDDCTRFCYVYL 572
>emb|CAE04792.1| OSJNBb0018J12.5 [Oryza sativa Japonica Group]
Length = 1320
Score = 63.9 bits (154), Expect(3) = 3e-27
Identities = 27/51 (52%), Positives = 38/51 (74%)
Frame = -3
Query: 155 FCQQHGIIHQTTAPYSPRSNGIAERKNQHLLEVGRPIMFSMHVPKYIWGDA 3
FC++HGIIH+ T PYSP SNGIAERKN+ L ++ ++ + +PK WG+A
Sbjct: 572 FCEEHGIIHERTPPYSPESNGIAERKNRTLTDLVNAMLDTAGLPKAWWGEA 622
Score = 59.3 bits (142), Expect(3) = 3e-27
Identities = 28/41 (68%), Positives = 33/41 (80%)
Frame = -2
Query: 297 YIYLLKSKDEALVMFKHYKSEVENQLGKNIKAFRSDRRGEY 175
Y+YLLK+KDEAL FK YK+EVENQL + IK RSDR GE+
Sbjct: 524 YVYLLKTKDEALDYFKIYKAEVENQLDRKIKRLRSDRGGEF 564
Score = 44.7 bits (104), Expect(3) = 3e-27
Identities = 16/25 (64%), Positives = 23/25 (92%)
Frame = -1
Query: 364 VQSKGGKKYFITFIDDSIRYCYIYI 290
V +KGGK+YF+TFIDD+ R+CY+Y+
Sbjct: 503 VLTKGGKRYFMTFIDDATRFCYVYL 527
>gb|AAV24814.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1289
Score = 63.9 bits (154), Expect(3) = 3e-27
Identities = 27/51 (52%), Positives = 38/51 (74%)
Frame = -3
Query: 155 FCQQHGIIHQTTAPYSPRSNGIAERKNQHLLEVGRPIMFSMHVPKYIWGDA 3
FC++HGIIH+ T PYSP SNGIAERKN+ L ++ ++ + +PK WG+A
Sbjct: 572 FCEEHGIIHERTPPYSPESNGIAERKNRTLTDLVNAMLDTAGLPKAWWGEA 622
Score = 59.3 bits (142), Expect(3) = 3e-27
Identities = 28/41 (68%), Positives = 33/41 (80%)
Frame = -2
Query: 297 YIYLLKSKDEALVMFKHYKSEVENQLGKNIKAFRSDRRGEY 175
Y+YLLK+KDEAL FK YK+EVENQL + IK RSDR GE+
Sbjct: 524 YVYLLKTKDEALDYFKIYKAEVENQLDRKIKRLRSDRGGEF 564
Score = 44.7 bits (104), Expect(3) = 3e-27
Identities = 16/25 (64%), Positives = 23/25 (92%)
Frame = -1
Query: 364 VQSKGGKKYFITFIDDSIRYCYIYI 290
V +KGGK+YF+TFIDD+ R+CY+Y+
Sbjct: 503 VLTKGGKRYFMTFIDDATRFCYVYL 527
>gb|ABA99473.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1287
Score = 63.9 bits (154), Expect(3) = 3e-27
Identities = 27/51 (52%), Positives = 38/51 (74%)
Frame = -3
Query: 155 FCQQHGIIHQTTAPYSPRSNGIAERKNQHLLEVGRPIMFSMHVPKYIWGDA 3
FC++HGIIH+ T PYSP SNGIAERKN+ L ++ ++ + +PK WG+A
Sbjct: 533 FCEEHGIIHEMTPPYSPESNGIAERKNRTLTDLVNAMLDTAGLPKAWWGEA 583
Score = 59.3 bits (142), Expect(3) = 3e-27
Identities = 28/41 (68%), Positives = 33/41 (80%)
Frame = -2
Query: 297 YIYLLKSKDEALVMFKHYKSEVENQLGKNIKAFRSDRRGEY 175
Y+YLLK+KDEAL FK YK+EVENQL + IK RSDR GE+
Sbjct: 485 YVYLLKTKDEALDYFKIYKAEVENQLDRKIKRLRSDRGGEF 525
Score = 44.7 bits (104), Expect(3) = 3e-27
Identities = 16/25 (64%), Positives = 23/25 (92%)
Frame = -1
Query: 364 VQSKGGKKYFITFIDDSIRYCYIYI 290
V +KGGK+YF+TFIDD+ R+CY+Y+
Sbjct: 464 VLTKGGKRYFMTFIDDATRFCYVYL 488
>gb|ABA94191.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1060
Score = 63.9 bits (154), Expect(3) = 3e-27
Identities = 27/51 (52%), Positives = 38/51 (74%)
Frame = -3
Query: 155 FCQQHGIIHQTTAPYSPRSNGIAERKNQHLLEVGRPIMFSMHVPKYIWGDA 3
FC++HGIIH+ T PYSP SNGIAERKN+ L ++ ++ + +PK WG+A
Sbjct: 440 FCEEHGIIHERTPPYSPESNGIAERKNRTLTDLVNAMLDTAGLPKAWWGEA 490
Score = 59.3 bits (142), Expect(3) = 3e-27
Identities = 28/41 (68%), Positives = 33/41 (80%)
Frame = -2
Query: 297 YIYLLKSKDEALVMFKHYKSEVENQLGKNIKAFRSDRRGEY 175
Y+YLLK+KDEAL FK YK+EVENQL + IK RSDR GE+
Sbjct: 392 YVYLLKTKDEALDYFKIYKAEVENQLDRKIKRLRSDRGGEF 432
Score = 44.7 bits (104), Expect(3) = 3e-27
Identities = 16/25 (64%), Positives = 23/25 (92%)
Frame = -1
Query: 364 VQSKGGKKYFITFIDDSIRYCYIYI 290
V +KGGK+YF+TFIDD+ R+CY+Y+
Sbjct: 371 VLTKGGKRYFMTFIDDATRFCYVYL 395
>gb|AAT44162.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1302
Score = 62.4 bits (150), Expect(3) = 8e-27
Identities = 26/51 (50%), Positives = 38/51 (74%)
Frame = -3
Query: 155 FCQQHGIIHQTTAPYSPRSNGIAERKNQHLLEVGRPIMFSMHVPKYIWGDA 3
FC++HGIIH+ T PYSP SNGIA+RKN+ L ++ ++ + +PK WG+A
Sbjct: 572 FCEEHGIIHERTPPYSPESNGIAKRKNRTLTDLVNAMLDTAGLPKAWWGEA 622
Score = 59.3 bits (142), Expect(3) = 8e-27
Identities = 28/41 (68%), Positives = 33/41 (80%)
Frame = -2
Query: 297 YIYLLKSKDEALVMFKHYKSEVENQLGKNIKAFRSDRRGEY 175
Y+YLLK+KDEAL FK YK+EVENQL + IK RSDR GE+
Sbjct: 524 YVYLLKTKDEALDYFKIYKAEVENQLDRKIKRLRSDRGGEF 564
Score = 44.7 bits (104), Expect(3) = 8e-27
Identities = 16/25 (64%), Positives = 23/25 (92%)
Frame = -1
Query: 364 VQSKGGKKYFITFIDDSIRYCYIYI 290
V +KGGK+YF+TFIDD+ R+CY+Y+
Sbjct: 503 VLTKGGKRYFMTFIDDATRFCYVYL 527
>gb|AAL75486.1|AF466202_12 putative Fourf gag/pol protein [Zea mays]
Length = 1292
Score = 62.0 bits (149), Expect(3) = 8e-27
Identities = 32/49 (65%), Positives = 36/49 (73%), Gaps = 1/49 (2%)
Frame = -2
Query: 297 YIYLLKSKDEALVMFKHYKSEVENQLGKNIKAFRSDRRGEY-DAPFDEF 154
Y+YLLK+KDEA FK YK+EVENQL + IK RSDR GEY FDEF
Sbjct: 538 YVYLLKTKDEAFNYFKAYKAEVENQLERKIKRLRSDRGGEYFSNVFDEF 586
Score = 58.5 bits (140), Expect(3) = 8e-27
Identities = 25/51 (49%), Positives = 37/51 (72%)
Frame = -3
Query: 155 FCQQHGIIHQTTAPYSPRSNGIAERKNQHLLEVGRPIMFSMHVPKYIWGDA 3
FC +HGIIH+ T P+SP+SNGIAERKN+ L ++ ++ + + K WG+A
Sbjct: 586 FCVEHGIIHERTPPFSPQSNGIAERKNRTLTDLVNAMLSTAGLSKAWWGEA 636
Score = 45.8 bits (107), Expect(3) = 8e-27
Identities = 16/25 (64%), Positives = 23/25 (92%)
Frame = -1
Query: 364 VQSKGGKKYFITFIDDSIRYCYIYI 290
+ +KGGK+YF+TFIDDS R+CY+Y+
Sbjct: 517 ILTKGGKRYFLTFIDDSTRFCYVYL 541
>gb|ABA93525.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1235
Score = 63.9 bits (154), Expect(3) = 8e-27
Identities = 27/51 (52%), Positives = 38/51 (74%)
Frame = -3
Query: 155 FCQQHGIIHQTTAPYSPRSNGIAERKNQHLLEVGRPIMFSMHVPKYIWGDA 3
FC++HGIIH+ T PYSP SNGIAERKN+ L ++ ++ + +PK WG+A
Sbjct: 505 FCEEHGIIHERTPPYSPESNGIAERKNRTLTDLVNAMLDTTGLPKAWWGEA 555
Score = 57.8 bits (138), Expect(3) = 8e-27
Identities = 27/41 (65%), Positives = 33/41 (80%)
Frame = -2
Query: 297 YIYLLKSKDEALVMFKHYKSEVENQLGKNIKAFRSDRRGEY 175
Y+YLLK+KDEAL FK YK+EV+NQL + IK RSDR GE+
Sbjct: 457 YVYLLKTKDEALDYFKIYKAEVKNQLDRKIKRLRSDRGGEF 497
Score = 44.7 bits (104), Expect(3) = 8e-27
Identities = 16/25 (64%), Positives = 23/25 (92%)
Frame = -1
Query: 364 VQSKGGKKYFITFIDDSIRYCYIYI 290
V +KGGK+YF+TFIDD+ R+CY+Y+
Sbjct: 436 VLTKGGKRYFMTFIDDATRFCYVYL 460
>gb|AAG03096.2|AC073405_12 putative polyprotein [Oryza sativa Japonica Group]
gi|57863849|gb|AAW56890.1| putative polyprotein [Oryza
sativa Japonica Group]
Length = 1274
Score = 63.9 bits (154), Expect(3) = 1e-26
Identities = 27/51 (52%), Positives = 38/51 (74%)
Frame = -3
Query: 155 FCQQHGIIHQTTAPYSPRSNGIAERKNQHLLEVGRPIMFSMHVPKYIWGDA 3
FC++HGIIH+ T PYSP SNGIAERKN+ L ++ ++ + +PK WG+A
Sbjct: 572 FCEEHGIIHEMTPPYSPESNGIAERKNRTLTDLVNAMLDTAGLPKAWWGEA 622
Score = 57.4 bits (137), Expect(3) = 1e-26
Identities = 27/41 (65%), Positives = 32/41 (78%)
Frame = -2
Query: 297 YIYLLKSKDEALVMFKHYKSEVENQLGKNIKAFRSDRRGEY 175
Y+YLLK+KDEAL FK YK+EVENQL + IK RSD GE+
Sbjct: 524 YVYLLKTKDEALDYFKIYKAEVENQLDRKIKRLRSDHGGEF 564
Score = 44.7 bits (104), Expect(3) = 1e-26
Identities = 16/25 (64%), Positives = 23/25 (92%)
Frame = -1
Query: 364 VQSKGGKKYFITFIDDSIRYCYIYI 290
V +KGGK+YF+TFIDD+ R+CY+Y+
Sbjct: 503 VLTKGGKRYFMTFIDDATRFCYVYL 527
>gb|AAN61480.1| Putative polyprotein from transposon TNT [Oryza sativa Japonica
Group]
Length = 1911
Score = 63.9 bits (154), Expect(3) = 1e-26
Identities = 27/51 (52%), Positives = 38/51 (74%)
Frame = -3
Query: 155 FCQQHGIIHQTTAPYSPRSNGIAERKNQHLLEVGRPIMFSMHVPKYIWGDA 3
FC++HGIIH+ T PYSP SNGIAERKN+ L ++ ++ + +PK WG+A
Sbjct: 572 FCEEHGIIHERTPPYSPESNGIAERKNRTLTDLVNAMLDTAGLPKAWWGEA 622
Score = 59.3 bits (142), Expect(3) = 1e-26
Identities = 28/41 (68%), Positives = 33/41 (80%)
Frame = -2
Query: 297 YIYLLKSKDEALVMFKHYKSEVENQLGKNIKAFRSDRRGEY 175
Y+YLLK+KDEAL FK YK+EVENQL + IK RSDR GE+
Sbjct: 524 YVYLLKTKDEALDYFKIYKAEVENQLDRKIKRLRSDRGGEF 564
Score = 42.4 bits (98), Expect(3) = 1e-26
Identities = 15/25 (60%), Positives = 22/25 (88%)
Frame = -1
Query: 364 VQSKGGKKYFITFIDDSIRYCYIYI 290
V +KGGK+YF+T IDD+ R+CY+Y+
Sbjct: 503 VLTKGGKRYFMTLIDDATRFCYVYL 527
>gb|ABA99751.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1805
Score = 63.9 bits (154), Expect(3) = 1e-26
Identities = 27/51 (52%), Positives = 38/51 (74%)
Frame = -3
Query: 155 FCQQHGIIHQTTAPYSPRSNGIAERKNQHLLEVGRPIMFSMHVPKYIWGDA 3
FC++HGIIH+ T PYSP SNGIAERKN+ L ++ ++ + +PK WG+A
Sbjct: 1057 FCEEHGIIHERTPPYSPESNGIAERKNRTLTDLVNAMLDTAGLPKAWWGEA 1107
Score = 59.3 bits (142), Expect(3) = 1e-26
Identities = 28/41 (68%), Positives = 33/41 (80%)
Frame = -2
Query: 297 YIYLLKSKDEALVMFKHYKSEVENQLGKNIKAFRSDRRGEY 175
Y+YLLK+KDEAL FK YK+EVENQL + IK RSDR GE+
Sbjct: 1009 YVYLLKTKDEALDYFKIYKAEVENQLDRKIKRLRSDRGGEF 1049
Score = 42.4 bits (98), Expect(3) = 1e-26
Identities = 15/25 (60%), Positives = 22/25 (88%)
Frame = -1
Query: 364 VQSKGGKKYFITFIDDSIRYCYIYI 290
V +KGGK+YF+T IDD+ R+CY+Y+
Sbjct: 988 VLTKGGKRYFMTLIDDATRFCYVYL 1012
>gb|ABA93737.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1579
Score = 63.9 bits (154), Expect(3) = 1e-26
Identities = 27/51 (52%), Positives = 38/51 (74%)
Frame = -3
Query: 155 FCQQHGIIHQTTAPYSPRSNGIAERKNQHLLEVGRPIMFSMHVPKYIWGDA 3
FC++HGIIH+ T PYSP SNGIAERKN+ L ++ ++ + +PK WG+A
Sbjct: 858 FCEEHGIIHERTPPYSPESNGIAERKNRTLTDLVNAMLDTAGLPKAWWGEA 908
Score = 59.3 bits (142), Expect(3) = 1e-26
Identities = 28/41 (68%), Positives = 33/41 (80%)
Frame = -2
Query: 297 YIYLLKSKDEALVMFKHYKSEVENQLGKNIKAFRSDRRGEY 175
Y+YLLK+KDEAL FK YK+EVENQL + IK RSDR GE+
Sbjct: 810 YVYLLKTKDEALDYFKIYKAEVENQLDRKIKRLRSDRGGEF 850
Score = 42.4 bits (98), Expect(3) = 1e-26
Identities = 15/25 (60%), Positives = 22/25 (88%)
Frame = -1
Query: 364 VQSKGGKKYFITFIDDSIRYCYIYI 290
V +KGGK+YF+T IDD+ R+CY+Y+
Sbjct: 789 VLTKGGKRYFMTLIDDATRFCYVYL 813
>gb|ABF96702.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1518
Score = 63.9 bits (154), Expect(3) = 1e-26
Identities = 27/51 (52%), Positives = 38/51 (74%)
Frame = -3
Query: 155 FCQQHGIIHQTTAPYSPRSNGIAERKNQHLLEVGRPIMFSMHVPKYIWGDA 3
FC++HGIIH+ T PYSP SNGIAERKN+ L ++ ++ + +PK WG+A
Sbjct: 788 FCEEHGIIHERTPPYSPESNGIAERKNRTLTDLVNAMLDTAGLPKAWWGEA 838
Score = 59.3 bits (142), Expect(3) = 1e-26
Identities = 28/41 (68%), Positives = 33/41 (80%)
Frame = -2
Query: 297 YIYLLKSKDEALVMFKHYKSEVENQLGKNIKAFRSDRRGEY 175
Y+YLLK+KDEAL FK YK+EVENQL + IK RSDR GE+
Sbjct: 740 YVYLLKTKDEALDYFKIYKAEVENQLDRKIKRLRSDRGGEF 780
Score = 42.4 bits (98), Expect(3) = 1e-26
Identities = 15/25 (60%), Positives = 22/25 (88%)
Frame = -1
Query: 364 VQSKGGKKYFITFIDDSIRYCYIYI 290
V +KGGK+YF+T IDD+ R+CY+Y+
Sbjct: 719 VLTKGGKRYFMTLIDDATRFCYVYL 743
>gb|ABA96779.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1468
Score = 63.9 bits (154), Expect(3) = 1e-26
Identities = 27/51 (52%), Positives = 38/51 (74%)
Frame = -3
Query: 155 FCQQHGIIHQTTAPYSPRSNGIAERKNQHLLEVGRPIMFSMHVPKYIWGDA 3
FC++HGIIH+ T PYSP SNGIAERKN+ L ++ ++ + +PK WG+A
Sbjct: 659 FCEEHGIIHERTPPYSPESNGIAERKNRTLTDLVNAMLDTAGLPKTWWGEA 709
Score = 59.3 bits (142), Expect(3) = 1e-26
Identities = 28/41 (68%), Positives = 33/41 (80%)
Frame = -2
Query: 297 YIYLLKSKDEALVMFKHYKSEVENQLGKNIKAFRSDRRGEY 175
Y+YLLK+KDEAL FK YK+EVENQL + IK RSDR GE+
Sbjct: 611 YVYLLKTKDEALDYFKIYKAEVENQLDRKIKRLRSDRGGEF 651
Score = 42.4 bits (98), Expect(3) = 1e-26
Identities = 15/25 (60%), Positives = 22/25 (88%)
Frame = -1
Query: 364 VQSKGGKKYFITFIDDSIRYCYIYI 290
V +KGGK+YF+T IDD+ R+CY+Y+
Sbjct: 590 VLTKGGKRYFMTLIDDATRFCYVYL 614