BLASTX nr result
ID: Cocculus22_contig00021303
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus22_contig00021303
(581 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002271967.1| PREDICTED: nuclear pore complex protein Nup9... 247 1e-63
ref|XP_006465209.1| PREDICTED: nuclear pore complex protein Nup9... 232 5e-59
ref|XP_006427580.1| hypothetical protein CICLE_v10024784mg [Citr... 228 9e-58
ref|XP_007023385.1| Suppressor of auxin resistance 3 [Theobroma ... 221 8e-56
ref|XP_007220283.1| hypothetical protein PRUPE_ppa000667mg [Prun... 221 1e-55
gb|EXB67202.1| Nuclear pore complex protein [Morus notabilis] 218 9e-55
ref|XP_004140177.1| PREDICTED: nuclear pore complex protein Nup9... 215 8e-54
ref|XP_002527319.1| nucleoporin, putative [Ricinus communis] gi|... 212 5e-53
ref|XP_004301585.1| PREDICTED: nuclear pore complex protein Nup9... 208 7e-52
ref|XP_002303836.1| PRECOCIOUS family protein [Populus trichocar... 204 1e-50
dbj|BAO49746.1| nuclear pore complex protein Nup96a [Nicotiana b... 203 3e-50
ref|XP_004491602.1| PREDICTED: nuclear pore complex protein Nup9... 197 2e-48
ref|XP_002889279.1| hypothetical protein ARALYDRAFT_895920 [Arab... 197 2e-48
ref|XP_006341370.1| PREDICTED: nuclear pore complex protein Nup9... 194 1e-47
gb|EYU21718.1| hypothetical protein MIMGU_mgv1a000765mg [Mimulus... 194 2e-47
ref|XP_006300673.1| hypothetical protein CARUB_v10019705mg [Caps... 193 3e-47
ref|XP_004235924.1| PREDICTED: nuclear pore complex protein Nup9... 192 6e-47
gb|AAF14656.1|AC011713_4 Identical to gi|1297187 nucleoprotein 9... 192 6e-47
ref|NP_178183.2| suppressor of auxin resistance 3 [Arabidopsis t... 192 6e-47
ref|XP_003544079.1| PREDICTED: nuclear pore complex protein Nup9... 192 6e-47
>ref|XP_002271967.1| PREDICTED: nuclear pore complex protein Nup98-Nup96 [Vitis
vinifera]
Length = 1041
Score = 247 bits (631), Expect = 1e-63
Identities = 126/194 (64%), Positives = 148/194 (76%), Gaps = 1/194 (0%)
Frame = -2
Query: 580 ETDVRWLDLDQIVKFGRNEVVVYEDENDKPAIGQGLNKAAEVTLILPARSSALKGKGLVD 401
+TDVRWLDLDQI++FGR+EVVVY DE KP +GQGLNKAAEVTL+L RSS+ + L D
Sbjct: 92 DTDVRWLDLDQIIRFGRHEVVVYGDEGAKPEVGQGLNKAAEVTLVLQIRSSSFEEGRLND 151
Query: 400 VVTKLRSSTKRQGASFISFDPLSGEWKFLVHHFSRFGLTEDDEEDIVMDDTNVAQPSREI 221
+V KLR TKRQGA FISF+P +GEWKFLVHHFSRFGL+EDDEEDI MDD V Q E
Sbjct: 152 IVEKLRLCTKRQGADFISFNPSNGEWKFLVHHFSRFGLSEDDEEDIAMDDVTVVQHPLET 211
Query: 220 DDDEVSEIAEEAQFDPDESVLSHSLPAHLGLDPIKMQEMRTLMFPADEEAE-TFEVPFSH 44
+ EVS+I E +P+ +VLSHSLPAHLGLDPIKM+EMR +MFP DEE + F F
Sbjct: 212 NAHEVSDIDEATLVEPNGAVLSHSLPAHLGLDPIKMKEMRMVMFPVDEEEDHDFSGEFKQ 271
Query: 43 EKQSFGKEHIRSNL 2
+QSF KE+IR L
Sbjct: 272 REQSFNKEYIRPPL 285
>ref|XP_006465209.1| PREDICTED: nuclear pore complex protein Nup98-Nup96-like [Citrus
sinensis]
Length = 1041
Score = 232 bits (592), Expect = 5e-59
Identities = 119/194 (61%), Positives = 146/194 (75%), Gaps = 2/194 (1%)
Frame = -2
Query: 577 TDVRWLDLDQIVKFGRNEVVVYEDENDKPAIGQGLNKAAEVTLILPARSSALKGK--GLV 404
TDVRWLDLDQIVKFGR+E+VVYEDE+ KP +GQGLNKAAEVTL L R +LK K
Sbjct: 91 TDVRWLDLDQIVKFGRHEIVVYEDESSKPEVGQGLNKAAEVTLFLQGRYLSLKLKEGDSD 150
Query: 403 DVVTKLRSSTKRQGASFISFDPLSGEWKFLVHHFSRFGLTEDDEEDIVMDDTNVAQPSRE 224
D V K++ T+RQGA F+SFDP+SGEWKFLV HFSRFGL++D+E+DI+MDD Q S E
Sbjct: 151 DFVKKMKERTERQGARFVSFDPVSGEWKFLVVHFSRFGLSDDEEDDIMMDDATPVQNSLE 210
Query: 223 IDDDEVSEIAEEAQFDPDESVLSHSLPAHLGLDPIKMQEMRTLMFPADEEAETFEVPFSH 44
++ EVS++ EE Q D LSHSLPAHLGLDPIKM+EMR +MF +EE + F S
Sbjct: 211 MNGGEVSDVDEETQMDLSGPELSHSLPAHLGLDPIKMKEMRMVMFQEEEEIDDFSGTPSR 270
Query: 43 EKQSFGKEHIRSNL 2
+++S GKE+IR L
Sbjct: 271 QQRSLGKEYIRPPL 284
>ref|XP_006427580.1| hypothetical protein CICLE_v10024784mg [Citrus clementina]
gi|557529570|gb|ESR40820.1| hypothetical protein
CICLE_v10024784mg [Citrus clementina]
Length = 1041
Score = 228 bits (581), Expect = 9e-58
Identities = 117/194 (60%), Positives = 145/194 (74%), Gaps = 2/194 (1%)
Frame = -2
Query: 577 TDVRWLDLDQIVKFGRNEVVVYEDENDKPAIGQGLNKAAEVTLILPARSSALKGK--GLV 404
TDVRWLDLDQIVKFGR+E+VVYEDE+ KP +GQGLNKAAEVTL L R +LK K
Sbjct: 91 TDVRWLDLDQIVKFGRHEIVVYEDESSKPEVGQGLNKAAEVTLFLQGRYLSLKLKEGDSD 150
Query: 403 DVVTKLRSSTKRQGASFISFDPLSGEWKFLVHHFSRFGLTEDDEEDIVMDDTNVAQPSRE 224
D V K++ T+RQGA F+SFDP+SGEWKFLV HFSRFGL++++E+DI+MDD Q S E
Sbjct: 151 DFVKKMKERTERQGARFVSFDPVSGEWKFLVVHFSRFGLSDEEEDDIMMDDATPVQNSLE 210
Query: 223 IDDDEVSEIAEEAQFDPDESVLSHSLPAHLGLDPIKMQEMRTLMFPADEEAETFEVPFSH 44
++ EVS++ EE Q D LSHSLPAHLGLDP+KM+EMR +MF +EE + F S
Sbjct: 211 MNGGEVSDVDEETQMDLSGPELSHSLPAHLGLDPLKMKEMRMVMFQEEEEIDDFSGTPSW 270
Query: 43 EKQSFGKEHIRSNL 2
++ S GKE+IR L
Sbjct: 271 QQWSLGKEYIRPPL 284
>ref|XP_007023385.1| Suppressor of auxin resistance 3 [Theobroma cacao]
gi|508778751|gb|EOY26007.1| Suppressor of auxin
resistance 3 [Theobroma cacao]
Length = 1069
Score = 221 bits (564), Expect = 8e-56
Identities = 118/195 (60%), Positives = 144/195 (73%), Gaps = 3/195 (1%)
Frame = -2
Query: 577 TDVRWLDLDQIVKFGRNEVVVYEDENDKPAIGQGLNKAAEVTLILPARSSALKGKGLVDV 398
TDVR L+LDQIVKF R+EV+VYEDE++KP +GQGLNK AEVTL L + L+ + + +
Sbjct: 117 TDVRGLNLDQIVKFHRHEVIVYEDESNKPMVGQGLNKTAEVTLRLQLKHLILEKQEVDGI 176
Query: 397 VTKLRSSTKRQGASFISFDPLSGEWKFLVHHFSRFGLTEDDEEDIVMDD-TNVAQPSREI 221
V KL S RQGA FI+FDP +GEWKFLV HFSRFGL+ED+EEDI+MDD T V Q E+
Sbjct: 177 VKKLGESMTRQGAQFIAFDPANGEWKFLVDHFSRFGLSEDEEEDIIMDDATGVVQDPGEM 236
Query: 220 DDDEVSEIAEEAQFDPDESVLSHSLPAHLGLDPIKMQEMRTLMFPA--DEEAETFEVPFS 47
+ E I E+ Q D + VLSHSLPAHLGLDP+KM+EMR LMFP +EE E F S
Sbjct: 237 NGGENCGIDEDMQIDTNGLVLSHSLPAHLGLDPLKMKEMRMLMFPVEEEEEIEDFRGAAS 296
Query: 46 HEKQSFGKEHIRSNL 2
H+K +FGKE+IRS L
Sbjct: 297 HQKPAFGKEYIRSPL 311
>ref|XP_007220283.1| hypothetical protein PRUPE_ppa000667mg [Prunus persica]
gi|462416745|gb|EMJ21482.1| hypothetical protein
PRUPE_ppa000667mg [Prunus persica]
Length = 1042
Score = 221 bits (562), Expect = 1e-55
Identities = 114/194 (58%), Positives = 141/194 (72%), Gaps = 1/194 (0%)
Frame = -2
Query: 580 ETDVRWLDLDQIVKFGRNEVVVYEDENDKPAIGQGLNKAAEVTLILPARSSALKGKGLVD 401
+TD+R L+LD+IVKF R+EV+VYEDE KP +GQGLNK AEVTL+L R S + + +
Sbjct: 92 KTDIRRLELDKIVKFRRHEVIVYEDETAKPLVGQGLNKPAEVTLVLQTRPSNMDKRQKDN 151
Query: 400 VVTKLRSSTKRQGASFISFDPLSGEWKFLVHHFSRFGLTEDDEEDIVMDDTNVAQPSREI 221
V KLR + QGA FISF+P +GEWKF VHHFSRFGL+EDDEEDI+M+D AQ E+
Sbjct: 152 SVKKLRQIVEGQGAQFISFNPENGEWKFFVHHFSRFGLSEDDEEDIMMEDAAAAQDLVEM 211
Query: 220 DDDEVSEIAEEAQFDPDESVLSHSLPAHLGLDPIKMQEMRTLMFP-ADEEAETFEVPFSH 44
+ E+S+ EE Q DP VLSHSLPAHLGLDP+KM+EMR LMFP +EEAE +H
Sbjct: 212 NHGEISDADEETQMDPTGIVLSHSLPAHLGLDPVKMKEMRMLMFPDGEEEAEELNQVPAH 271
Query: 43 EKQSFGKEHIRSNL 2
SFG+E+IR L
Sbjct: 272 YNPSFGREYIRPPL 285
>gb|EXB67202.1| Nuclear pore complex protein [Morus notabilis]
Length = 948
Score = 218 bits (555), Expect = 9e-55
Identities = 115/189 (60%), Positives = 138/189 (73%), Gaps = 2/189 (1%)
Frame = -2
Query: 580 ETDVRWLDLDQIVKFGRNEVVVYEDENDKPAIGQGLNKAAEVTLILPARSSALKGKGLVD 401
ETDVR LD+D IV FGR+E+VVYEDE+ KP +GQGLNK AEVTL+L S+ +K
Sbjct: 114 ETDVRLLDVDAIVTFGRHEIVVYEDESAKPLVGQGLNKTAEVTLVLRLTSANVKEGRKEI 173
Query: 400 VVTKLRSSTKRQGASFISFDPLSGEWKFLVHHFSRFGLTEDDEEDIVMDD-TNVAQPSRE 224
+ KLR ST RQGA FISFDP +GEWKFL HHFSRFGL+EDDEEDI MDD T AQ +
Sbjct: 174 IEEKLRRSTDRQGAQFISFDPENGEWKFLAHHFSRFGLSEDDEEDITMDDATPAAQEPVD 233
Query: 223 IDDDEVSEIAEEAQFDPDESVLSHSLPAHLGLDPIKMQEMRTLMFPADEE-AETFEVPFS 47
++ DEV ++ EEA+ D +LSHSLPAHLGLDP+KM EMR LMF +EE E F +
Sbjct: 234 MNGDEVLDVDEEAELDHSGGLLSHSLPAHLGLDPVKMNEMRMLMFRDEEEDMEDFNHTHA 293
Query: 46 HEKQSFGKE 20
+K SFGK+
Sbjct: 294 RQKPSFGKD 302
>ref|XP_004140177.1| PREDICTED: nuclear pore complex protein Nup98-Nup96-like [Cucumis
sativus] gi|449481026|ref|XP_004156060.1| PREDICTED:
nuclear pore complex protein Nup98-Nup96-like [Cucumis
sativus]
Length = 1073
Score = 215 bits (547), Expect = 8e-54
Identities = 110/192 (57%), Positives = 143/192 (74%), Gaps = 1/192 (0%)
Frame = -2
Query: 580 ETDVRWLDLDQIVKFGRNEVVVYEDENDKPAIGQGLNKAAEVTLILPARSSALKGKGLVD 401
+TDVR LDLDQIVKF +NEV+VYEDE KP +GQGLNK AEVTL+L + +++ G+ +
Sbjct: 120 KTDVRCLDLDQIVKFHKNEVIVYEDETTKPIVGQGLNKPAEVTLVLQSITTSFLGRQFDN 179
Query: 400 VVTKLRSSTKRQGASFISFDPLSGEWKFLVHHFSRFGLTEDDEEDIVMDDTNVAQPSREI 221
VV KL+ T+RQGA FISF+P + EWKF V+HFSRFGLTED+EED+VMDD N Q EI
Sbjct: 180 VVKKLKYFTERQGAHFISFEPENCEWKFSVNHFSRFGLTEDEEEDVVMDDPNAVQEPAEI 239
Query: 220 DDDEVSEIAEEAQFDPDESVLSHSLPAHLGLDPIKMQEMRTLMFPADE-EAETFEVPFSH 44
+ +E+SE E + D ESVL HSLPAHLGLDP+KM+EMR ++FP +E E E +
Sbjct: 240 NCNEISENNENSPMDFTESVLCHSLPAHLGLDPVKMKEMRMVIFPENEQEFEDYNESPKF 299
Query: 43 EKQSFGKEHIRS 8
+K G+E++R+
Sbjct: 300 QKSFTGREYMRT 311
>ref|XP_002527319.1| nucleoporin, putative [Ricinus communis]
gi|223533319|gb|EEF35071.1| nucleoporin, putative
[Ricinus communis]
Length = 1067
Score = 212 bits (540), Expect = 5e-53
Identities = 110/194 (56%), Positives = 138/194 (71%), Gaps = 2/194 (1%)
Frame = -2
Query: 577 TDVRWLDLDQIVKFGRNEVVVYEDENDKPAIGQGLNKAAEVTLILPARSSALKGKGLVDV 398
TD+RWLDLD+IVKF R+E+VVYED++DKP +GQGLNK AEVTL L R S L + L +
Sbjct: 118 TDLRWLDLDKIVKFRRHEIVVYEDDSDKPQVGQGLNKTAEVTLNLQIRLSDLNKRQLNNA 177
Query: 397 VTKLRSSTKRQGASFISFDPLSGEWKFLVHHFSRFGLTEDDEEDIVMDDTNVAQPSREID 218
V KL+ S RQGA FISF P +G+WKFLV+HFSRFGL++D+EEDI MDD + E+
Sbjct: 178 VKKLKESAARQGAYFISFHPENGQWKFLVNHFSRFGLSDDEEEDIAMDDVVAVEEPIEMG 237
Query: 217 DDEVSEIAEEAQFDPDESVLSHSLPAHLGLDPIKMQEMRTLMFPADEEAET--FEVPFSH 44
+ + + DP +L HSLPAHLGLDP+KM+EMR LMFP +EE E F P S
Sbjct: 238 GTPETNEETQVELDPTGPMLYHSLPAHLGLDPVKMKEMRMLMFPVEEEEEVEHFNGP-SR 296
Query: 43 EKQSFGKEHIRSNL 2
+K S GKEHI+ +L
Sbjct: 297 QKLSSGKEHIKHSL 310
>ref|XP_004301585.1| PREDICTED: nuclear pore complex protein Nup98-Nup96-like [Fragaria
vesca subsp. vesca]
Length = 1089
Score = 208 bits (530), Expect = 7e-52
Identities = 110/194 (56%), Positives = 143/194 (73%), Gaps = 1/194 (0%)
Frame = -2
Query: 580 ETDVRWLDLDQIVKFGRNEVVVYEDENDKPAIGQGLNKAAEVTLILPARSSALKGKGLVD 401
ETDVR L+LD+IVKF R+EV+VYEDE+ KP +G+GLNK AEVTL+L R + + +
Sbjct: 144 ETDVRCLELDKIVKFNRHEVIVYEDESAKPFVGRGLNKPAEVTLMLQTRLPCVDQRQIEH 203
Query: 400 VVTKLRSSTKRQGASFISFDPLSGEWKFLVHHFSRFGLTEDDEEDIVMDDTNVAQPSREI 221
+V LR S + QGA F+SF+P +GEWKF V+HFSRFGL ++DEED++M+DT+V + E+
Sbjct: 204 IVKILRHSVEGQGAHFVSFNPENGEWKFFVNHFSRFGLIDEDEEDMMMEDTDVGEDPPEL 263
Query: 220 DDDEVSEIAEEAQFDPDESVLSHSLPAHLGLDPIKMQEMRTLMF-PADEEAETFEVPFSH 44
+ DE+ + E Q D +VL HSLPAHLGLDPIKMQEMR LMF A+EEAE F+ SH
Sbjct: 264 NHDEMFD--EGNQMDRTGTVLLHSLPAHLGLDPIKMQEMRMLMFSDAEEEAEDFKESPSH 321
Query: 43 EKQSFGKEHIRSNL 2
SFGK++ RS L
Sbjct: 322 YNPSFGKDYSRSPL 335
>ref|XP_002303836.1| PRECOCIOUS family protein [Populus trichocarpa]
gi|222841268|gb|EEE78815.1| PRECOCIOUS family protein
[Populus trichocarpa]
Length = 1067
Score = 204 bits (519), Expect = 1e-50
Identities = 110/195 (56%), Positives = 134/195 (68%), Gaps = 2/195 (1%)
Frame = -2
Query: 580 ETDVRWLDLDQIVKFGRNEVVVYEDENDKPAIGQGLNKAAEVTLILPARSSALKGKGLVD 401
+TDVR L+LDQIVKF R+EV+VYEDEN KP +GQGLNK AEV+L L + + D
Sbjct: 116 KTDVRRLNLDQIVKFNRHEVIVYEDENAKPMVGQGLNKPAEVSLTLKLKLLDFNKGRIND 175
Query: 400 VVTKLRSSTKRQGASFISFDPLSGEWKFLVHHFSRFGLTEDDEEDIVMDDTNVAQPSREI 221
VV KLR S +RQGA FISFDP+ GEWKFLV HFSRFGL+ DDEEDI MDD Q E+
Sbjct: 176 VVEKLRESMERQGAEFISFDPVIGEWKFLVCHFSRFGLSGDDEEDITMDDAAEVQDPAEM 235
Query: 220 DDDEVSEIAEEA--QFDPDESVLSHSLPAHLGLDPIKMQEMRTLMFPADEEAETFEVPFS 47
E+ ++ EE + + +E VL HSLPAHLGLDP++M EMRT MFP DEE ++
Sbjct: 236 KGGEIVDMDEETPEEVEANEPVLYHSLPAHLGLDPVRMNEMRTWMFPDDEEEVVEDLIGL 295
Query: 46 HEKQSFGKEHIRSNL 2
+K + KE I S L
Sbjct: 296 RQKFPYNKESIGSPL 310
>dbj|BAO49746.1| nuclear pore complex protein Nup96a [Nicotiana benthamiana]
Length = 1037
Score = 203 bits (516), Expect = 3e-50
Identities = 113/194 (58%), Positives = 139/194 (71%), Gaps = 3/194 (1%)
Frame = -2
Query: 580 ETDVRWLDLDQIVKFGRNEVVVYEDENDKPAIGQGLNKAAEVTLILPARSSALKG-KGLV 404
ETDVR LDLD+IV F R+EVVVYEDENDKP +G+GLNK AEVTL+L RSS
Sbjct: 90 ETDVRGLDLDRIVTFSRHEVVVYEDENDKPPVGEGLNKPAEVTLLLKMRSSKNSDVDSSR 149
Query: 403 DVVTKLRSSTKRQGASFISFDPLSGEWKFLVHHFSRFGLTEDDEEDIVMDDTN-VAQPSR 227
++V KLR T+RQGA FISF+PL+GEWKF V HFSRFGL +DDEED++MDD + Q
Sbjct: 150 EMVEKLRCRTERQGARFISFNPLNGEWKFSVQHFSRFGLMDDDEEDMIMDDVSPEVQDPV 209
Query: 226 EIDDDEVSEIAEEAQFDPDESVLSHSLPAHLGLDPIKMQEMRTLMFPADEE-AETFEVPF 50
+++ +VS I EEA + + LSHSLPAHLGLDP+KM+EMR LMFPA+EE + +
Sbjct: 210 DMNGGDVSYIGEEATL-ANTTDLSHSLPAHLGLDPMKMKEMRMLMFPAEEEDVDDYHGRP 268
Query: 49 SHEKQSFGKEHIRS 8
S K F KE +S
Sbjct: 269 SDRKSQFSKESSKS 282
>ref|XP_004491602.1| PREDICTED: nuclear pore complex protein Nup98-Nup96-like isoform X1
[Cicer arietinum] gi|502099969|ref|XP_004491603.1|
PREDICTED: nuclear pore complex protein Nup98-Nup96-like
isoform X2 [Cicer arietinum]
Length = 1022
Score = 197 bits (501), Expect = 2e-48
Identities = 109/192 (56%), Positives = 131/192 (68%), Gaps = 2/192 (1%)
Frame = -2
Query: 580 ETDVRWLDLDQIVKFGRNEVVVYEDENDKPAIGQGLNKAAEVTLILPARSSALKGKGLVD 401
+TDVR L LD IVKF R+E+VVYEDENDKPA+GQGLNK+AEV L+L S LK K D
Sbjct: 90 KTDVRGLCLDDIVKFHRHEIVVYEDENDKPAVGQGLNKSAEVVLVLD--SGKLKSKECWD 147
Query: 400 V--VTKLRSSTKRQGASFISFDPLSGEWKFLVHHFSRFGLTEDDEEDIVMDDTNVAQPSR 227
V V KL+ +RQGA FISFDP++ EWKF+V HFSRFG +DDEED VMDD
Sbjct: 148 VVLVKKLKQCAERQGAQFISFDPVTCEWKFIVDHFSRFGFGDDDEEDAVMDDA------- 200
Query: 226 EIDDDEVSEIAEEAQFDPDESVLSHSLPAHLGLDPIKMQEMRTLMFPADEEAETFEVPFS 47
E ++ +E+ + DE LSHSLPAHL LDP+KM++MR LMFP +EE E
Sbjct: 201 -----EAHDVEKESPTNVDEIELSHSLPAHLRLDPVKMRDMRLLMFPNEEEMEDL----- 250
Query: 46 HEKQSFGKEHIR 11
K SFGKEH+R
Sbjct: 251 GRKSSFGKEHVR 262
>ref|XP_002889279.1| hypothetical protein ARALYDRAFT_895920 [Arabidopsis lyrata subsp.
lyrata] gi|297335120|gb|EFH65538.1| hypothetical protein
ARALYDRAFT_895920 [Arabidopsis lyrata subsp. lyrata]
Length = 1045
Score = 197 bits (501), Expect = 2e-48
Identities = 108/192 (56%), Positives = 137/192 (71%), Gaps = 3/192 (1%)
Frame = -2
Query: 577 TDVRWLDLDQIVKFGRNEVVVYEDENDKPAIGQGLNKAAEVTLILPARSSALKGKGLVD- 401
TDVR LDLDQIVKF R+EV+VY+DE+ KP +G+GLNKAAEVTLI+ + GK VD
Sbjct: 96 TDVRRLDLDQIVKFRRHEVIVYDDESSKPVVGEGLNKAAEVTLIVNIPNLTW-GKERVDH 154
Query: 400 VVTKLRSSTKRQGASFISFDPLSGEWKFLVHHFSRFGLTEDDEEDIVMDDTNVAQPSREI 221
+ KL+ ST+RQGA+FISFDP +G WKFLV HFSRFGL++D+ +DI MDD +
Sbjct: 155 IAYKLKQSTERQGATFISFDPDNGLWKFLVPHFSRFGLSDDEADDIAMDDAPGLGDPVGL 214
Query: 220 DDDEVSEIAEEAQFDPDESVLSHSLPAHLGLDPIKMQEMRTLMFPAD--EEAETFEVPFS 47
D ++V++I EE Q + E LSHSLPAHLGLDP KM+EMR LMFP + +E+E F S
Sbjct: 215 DGNKVADIDEEDQMETSELELSHSLPAHLGLDPGKMKEMRMLMFPHEDVDESEDFREQTS 274
Query: 46 HEKQSFGKEHIR 11
H S K ++R
Sbjct: 275 HNMTSLTKRNVR 286
>ref|XP_006341370.1| PREDICTED: nuclear pore complex protein Nup98-Nup96-like [Solanum
tuberosum]
Length = 1033
Score = 194 bits (493), Expect = 1e-47
Identities = 112/198 (56%), Positives = 141/198 (71%), Gaps = 5/198 (2%)
Frame = -2
Query: 580 ETDVRWLDLDQIVKFGRNEVVVYEDENDKPAIGQGLNKAAEVTLILPARSSA-LKGKGLV 404
ETDVR LDLD+IVKF R+EV+VYEDENDKP +G GLNK AEVTL+L RSS
Sbjct: 86 ETDVRGLDLDRIVKFSRHEVIVYEDENDKPPVGMGLNKPAEVTLLLEIRSSKHYDVDSSR 145
Query: 403 DVVTKLRSSTKRQGASFISFDPLSGEWKFLVHHFSRFGLT-EDDEEDIVMDDTN-VAQPS 230
++V KLR T+RQGA FISFDP +GEWKF V HFSRFGL E+++ED+++D + Q
Sbjct: 146 ELVEKLRLRTERQGARFISFDPSNGEWKFFVQHFSRFGLNDEEEDEDMIIDAVSPEVQDP 205
Query: 229 REIDDDEVSEIAEEAQFDPDESVLSHSLPAHLGLDPIKMQEMRTLMFPADEE--AETFEV 56
+++ +VS+I EE F + + LSHSLPAHLGLDP+KM+EMR LMFPA+EE + V
Sbjct: 206 VDMNGGDVSDIDEET-FLANTTDLSHSLPAHLGLDPVKMKEMRMLMFPAEEEDIDDYHGV 264
Query: 55 PFSHEKQSFGKEHIRSNL 2
PF + Q F KE +S L
Sbjct: 265 PFDRKPQ-FSKESSKSPL 281
>gb|EYU21718.1| hypothetical protein MIMGU_mgv1a000765mg [Mimulus guttatus]
Length = 991
Score = 194 bits (492), Expect = 2e-47
Identities = 103/195 (52%), Positives = 138/195 (70%), Gaps = 2/195 (1%)
Frame = -2
Query: 580 ETDVRWLDLDQIVKFGRNEVVVYEDENDKPAIGQGLNKAAEVTLILPARS-SALKGKGLV 404
+TDVR LDLD IVKF R EVVVYED++ KP +GQGLNK AEVTL+L +S +L L
Sbjct: 93 QTDVRCLDLDCIVKFNRCEVVVYEDDSSKPLVGQGLNKPAEVTLLLRLKSLKSLTADCLR 152
Query: 403 DVVTKLRSSTKRQGASFISFDPLSGEWKFLVHHFSRFGLTEDDEEDIVMDDTNVAQPSRE 224
D+ KL+ ++ QGA FISFDP+SGEWKFLV HFSRFGL E+DEEDI MDD + A+ +
Sbjct: 153 DIREKLKCKSQSQGAQFISFDPVSGEWKFLVQHFSRFGLGEEDEEDIPMDDVSPAEDHAD 212
Query: 223 IDDDEVSEIAEEAQFDPDESVLSHSLPAHLGLDPIKMQEMRTLMFPAD-EEAETFEVPFS 47
++ ++S++ EE D ++LSHSLP +LGLDP++M ++R ++F ++ +E E FS
Sbjct: 213 MNGSDMSDMYEE-DASVDRTLLSHSLPTNLGLDPVRMNDLRMMLFSSEQDEVEGLNNMFS 271
Query: 46 HEKQSFGKEHIRSNL 2
H+ F KE RS L
Sbjct: 272 HDISPFAKETSRSPL 286
>ref|XP_006300673.1| hypothetical protein CARUB_v10019705mg [Capsella rubella]
gi|482569383|gb|EOA33571.1| hypothetical protein
CARUB_v10019705mg [Capsella rubella]
Length = 1046
Score = 193 bits (490), Expect = 3e-47
Identities = 102/191 (53%), Positives = 133/191 (69%), Gaps = 2/191 (1%)
Frame = -2
Query: 577 TDVRWLDLDQIVKFGRNEVVVYEDENDKPAIGQGLNKAAEVTLILPARSSALKGKGLVDV 398
TDVR LDLDQIVKF R+EV+VY+DE+ KP +G+GLNK AEVTLI+ + L + + +
Sbjct: 96 TDVRRLDLDQIVKFQRHEVIVYDDESSKPVVGEGLNKVAEVTLIVNIPNLTLGNEQVDHI 155
Query: 397 VTKLRSSTKRQGASFISFDPLSGEWKFLVHHFSRFGLTEDDEEDIVMDDTNVAQPSREID 218
KL+ ST+RQGA+FISFDP G WKFLV HFSRFGL++D+ EDI M D +
Sbjct: 156 AYKLKQSTERQGATFISFDPDKGLWKFLVPHFSRFGLSDDEAEDIAMTDAPGLGDPVGQE 215
Query: 217 DDEVSEIAEEAQFDPDESVLSHSLPAHLGLDPIKMQEMRTLMFPAD--EEAETFEVPFSH 44
D+V++I EE Q + + LSHSLPAHLGLDP KM+EMR LMFP + +E++ F SH
Sbjct: 216 GDKVADINEEHQMETSQPELSHSLPAHLGLDPGKMKEMRMLMFPNEDLDESDDFGEQTSH 275
Query: 43 EKQSFGKEHIR 11
S K+++R
Sbjct: 276 HMASLTKQNVR 286
>ref|XP_004235924.1| PREDICTED: nuclear pore complex protein Nup98-Nup96-like [Solanum
lycopersicum]
Length = 1012
Score = 192 bits (488), Expect = 6e-47
Identities = 116/202 (57%), Positives = 143/202 (70%), Gaps = 9/202 (4%)
Frame = -2
Query: 580 ETDVRWLDLDQIVKFGRNEVVVYEDENDKPAIGQGLNKAAEVTLILPARSS----ALKGK 413
ETDVR LDLD+IVKF R+EV+VYEDENDKP +G GLNK AEVTL+L RSS +
Sbjct: 86 ETDVRGLDLDRIVKFSRHEVIVYEDENDKPPVGMGLNKPAEVTLLLEVRSSKHYDVDSSR 145
Query: 412 GLVDVVTKLRSSTKRQGASFISFDPLSGEWKFLVHHFSRFGLT-EDDEEDIVMDDTN--V 242
GLV+ KLR T++QGA FISFD +GEWKF V HFSRFGL E+++ED+++D + V
Sbjct: 146 GLVE---KLRLRTEKQGARFISFDLSNGEWKFFVQHFSRFGLNDEEEDEDMIIDGVSPEV 202
Query: 241 AQPSREIDDDEVSEIAEEAQFDPDESVLSHSLPAHLGLDPIKMQEMRTLMFPADEE--AE 68
P+ I D VS+I EE F + + LSHSLPAHLGLDP+KM+EMR LMFPA+EE +
Sbjct: 203 QDPADMIGGD-VSDIDEET-FLANTTDLSHSLPAHLGLDPVKMKEMRMLMFPAEEEDIDD 260
Query: 67 TFEVPFSHEKQSFGKEHIRSNL 2
VPF + Q FGKE +S L
Sbjct: 261 YPGVPFDRKPQ-FGKESSKSPL 281
>gb|AAF14656.1|AC011713_4 Identical to gi|1297187 nucleoprotein 98 homolog from Arabidopsis
thaliana cosmid gb|U53501. EST gb|W43800 comes from this
gene [Arabidopsis thaliana] gi|1297187|gb|AAA98914.1|
Theoretical protein with similarity to protein encoded
by GenBank Accession Number U41815, nucleoporin 98
[Arabidopsis thaliana]
Length = 850
Score = 192 bits (488), Expect = 6e-47
Identities = 102/191 (53%), Positives = 131/191 (68%), Gaps = 2/191 (1%)
Frame = -2
Query: 577 TDVRWLDLDQIVKFGRNEVVVYEDENDKPAIGQGLNKAAEVTLILPARSSALKGKGLVDV 398
TDVR LDLD IVKF R+EV+VY+DE+ KP +G+GLNKAAEVTL++ + + +
Sbjct: 89 TDVRRLDLDHIVKFHRHEVIVYDDESSKPVVGEGLNKAAEVTLVVNIPDLTWGKQQVNHI 148
Query: 397 VTKLRSSTKRQGASFISFDPLSGEWKFLVHHFSRFGLTEDDEEDIVMDDTNVAQPSREID 218
KL+ ST+RQGA+FISFDP +G WKF V HFSRFGL++D+ EDI MDD +D
Sbjct: 149 AYKLKQSTERQGATFISFDPDNGLWKFFVPHFSRFGLSDDEAEDIAMDDAPGLGDPVGLD 208
Query: 217 DDEVSEIAEEAQFDPDESVLSHSLPAHLGLDPIKMQEMRTLMFP--ADEEAETFEVPFSH 44
+V++I EE Q + E LSHSLPAHLGLDP KM+EMR LMFP ++E+E F SH
Sbjct: 209 GKKVADIDEEDQMETSELELSHSLPAHLGLDPEKMKEMRMLMFPNEDEDESEDFREQTSH 268
Query: 43 EKQSFGKEHIR 11
S K ++R
Sbjct: 269 LMTSLTKRNVR 279
>ref|NP_178183.2| suppressor of auxin resistance 3 [Arabidopsis thaliana]
gi|75156731|sp|Q8LLD0.1|NUP96_ARATH RecName:
Full=Nuclear pore complex protein Nup96 homolog;
Short=AtNUP96; AltName: Full=Nucleoporin 96; AltName:
Full=Nucleoporin PRECOCIOUS; AltName: Full=Nucleoporin
PRECOZ; AltName: Full=Protein MODIFIER OF SNC1 3;
AltName: Full=Protein SUPPRESSOR OF AUXIN RESISTANCE 3
gi|22652299|gb|AAN03676.1|AF411839_1 putative
nucleoporin PRECOZ [Arabidopsis thaliana]
gi|61353788|gb|AAX44044.1| putative nucleoporin 96
[Arabidopsis thaliana] gi|332198315|gb|AEE36436.1|
suppressor of auxin resistance 3 [Arabidopsis thaliana]
Length = 1046
Score = 192 bits (488), Expect = 6e-47
Identities = 102/191 (53%), Positives = 131/191 (68%), Gaps = 2/191 (1%)
Frame = -2
Query: 577 TDVRWLDLDQIVKFGRNEVVVYEDENDKPAIGQGLNKAAEVTLILPARSSALKGKGLVDV 398
TDVR LDLD IVKF R+EV+VY+DE+ KP +G+GLNKAAEVTL++ + + +
Sbjct: 96 TDVRRLDLDHIVKFHRHEVIVYDDESSKPVVGEGLNKAAEVTLVVNIPDLTWGKQQVNHI 155
Query: 397 VTKLRSSTKRQGASFISFDPLSGEWKFLVHHFSRFGLTEDDEEDIVMDDTNVAQPSREID 218
KL+ ST+RQGA+FISFDP +G WKF V HFSRFGL++D+ EDI MDD +D
Sbjct: 156 AYKLKQSTERQGATFISFDPDNGLWKFFVPHFSRFGLSDDEAEDIAMDDAPGLGDPVGLD 215
Query: 217 DDEVSEIAEEAQFDPDESVLSHSLPAHLGLDPIKMQEMRTLMFP--ADEEAETFEVPFSH 44
+V++I EE Q + E LSHSLPAHLGLDP KM+EMR LMFP ++E+E F SH
Sbjct: 216 GKKVADIDEEDQMETSELELSHSLPAHLGLDPEKMKEMRMLMFPNEDEDESEDFREQTSH 275
Query: 43 EKQSFGKEHIR 11
S K ++R
Sbjct: 276 LMTSLTKRNVR 286
>ref|XP_003544079.1| PREDICTED: nuclear pore complex protein Nup98-Nup96-like isoform X1
[Glycine max] gi|571506071|ref|XP_006595657.1|
PREDICTED: nuclear pore complex protein Nup98-Nup96-like
isoform X2 [Glycine max]
Length = 1022
Score = 192 bits (488), Expect = 6e-47
Identities = 109/192 (56%), Positives = 133/192 (69%), Gaps = 2/192 (1%)
Frame = -2
Query: 580 ETDVRWLDLDQIVKFGRNEVVVYEDENDKPAIGQGLNKAAEVTLILPARSSALKGK-GLV 404
ETDVR L +D+IVKF R+E+VVY DENDKPA+GQGLNKAAEV L+L S LK K G
Sbjct: 90 ETDVRGLRIDEIVKFHRHEIVVYSDENDKPAVGQGLNKAAEVVLVLD--SEILKSKEGKE 147
Query: 403 DV-VTKLRSSTKRQGASFISFDPLSGEWKFLVHHFSRFGLTEDDEEDIVMDDTNVAQPSR 227
DV V+KL+ TKRQ A FISFD ++GEWKFLV HFSRFG +DDEEDI MDD
Sbjct: 148 DVMVSKLKQITKRQKAQFISFDLVTGEWKFLVGHFSRFGFGDDDEEDIAMDDA------- 200
Query: 226 EIDDDEVSEIAEEAQFDPDESVLSHSLPAHLGLDPIKMQEMRTLMFPADEEAETFEVPFS 47
EV ++ +E+ + +E LSHSLP+HL LDP+KM+EMR LMFP +EE E
Sbjct: 201 -----EVYDVEKESPSNTNELELSHSLPSHLRLDPVKMREMRLLMFPDEEEVEDLSC--- 252
Query: 46 HEKQSFGKEHIR 11
K S GK+++R
Sbjct: 253 --KSSSGKQYVR 262