BLASTX nr result
ID: Cocculus22_contig00021269
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus22_contig00021269
(278 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAN62863.1| hypothetical protein VITISV_030334 [Vitis vinifera] 64 3e-17
gb|AAK43485.1|AC084807_10 polyprotein, putative [Arabidopsis tha... 64 8e-17
emb|CAN76493.1| hypothetical protein VITISV_007584 [Vitis vinifera] 64 1e-16
dbj|BAM44535.1| polyprotein [Arabidopsis thaliana] 62 2e-16
dbj|BAM44534.1| polyprotein [Arabidopsis thaliana] 62 2e-16
dbj|BAM42650.1| Polyprotein [Arabidopsis thaliana] 62 2e-16
dbj|BAM42647.1| polyprotein [Arabidopsis thaliana] gi|403406144|... 62 2e-16
dbj|BAM42646.1| polyprotein [Arabidopsis thaliana] 62 2e-16
gb|AAC79110.1| putative polyprotein of LTR transposon [Arabidops... 62 2e-16
dbj|BAA78427.1| polyprotein [Arabidopsis thaliana] 62 2e-16
dbj|BAM44532.1| polyprotein [Arabidopsis thaliana] 62 2e-16
dbj|BAM44531.1| polyprotein [Arabidopsis thaliana] 62 2e-16
dbj|BAM44530.1| polyprotein [Arabidopsis thaliana] 62 2e-16
dbj|BAM44529.1| polyprotein [Arabidopsis thaliana] 62 2e-16
dbj|BAA78424.1| polyprotein [Arabidopsis thaliana] gi|404433798|... 62 2e-16
emb|CAN66005.1| hypothetical protein VITISV_027449 [Vitis vinifera] 64 2e-16
emb|CAN61823.1| hypothetical protein VITISV_008493 [Vitis vinifera] 63 2e-16
emb|CAN71676.1| hypothetical protein VITISV_015838 [Vitis vinifera] 64 2e-16
emb|CAN65591.1| hypothetical protein VITISV_042091 [Vitis vinifera] 62 4e-16
emb|CAN62447.1| hypothetical protein VITISV_024007 [Vitis vinifera] 65 4e-16
>emb|CAN62863.1| hypothetical protein VITISV_030334 [Vitis vinifera]
Length = 1442
Score = 63.5 bits (153), Expect(2) = 3e-17
Identities = 28/39 (71%), Positives = 33/39 (84%)
Frame = -3
Query: 144 SFAVNKLSQFMHQPTQNHWSAAKRVLCYLKNTIYHGLLL 28
SFAVNKLSQFMH+PT HW+A KR+L YLK TI+HG+ L
Sbjct: 1172 SFAVNKLSQFMHKPTTAHWTATKRLLRYLKQTIFHGIQL 1210
Score = 50.4 bits (119), Expect(2) = 3e-17
Identities = 21/44 (47%), Positives = 34/44 (77%)
Frame = -2
Query: 277 KEVATPQFTSVPLVLHDGSPPLDATQYHQLVRALQYLAITRPDI 146
K+V+TP T+ L L DG+ P+D+T + +++ +LQYL++TRPDI
Sbjct: 1128 KDVSTPLSTTASLKLFDGTAPVDSTDFRRVIGSLQYLSLTRPDI 1171
>gb|AAK43485.1|AC084807_10 polyprotein, putative [Arabidopsis thaliana]
gi|225898008|dbj|BAH30336.1| hypothetical protein
[Arabidopsis thaliana]
Length = 1459
Score = 63.9 bits (154), Expect(2) = 8e-17
Identities = 29/48 (60%), Positives = 34/48 (70%)
Frame = -3
Query: 144 SFAVNKLSQFMHQPTQNHWSAAKRVLCYLKNTIYHGLLLKCGPHLILH 1
+FAVN+LSQFMHQPT +HW AAKRVL YL T HG+ L + LH
Sbjct: 1256 AFAVNRLSQFMHQPTSDHWQAAKRVLRYLAGTTTHGIFLNSSSPIHLH 1303
Score = 48.5 bits (114), Expect(2) = 8e-17
Identities = 25/44 (56%), Positives = 30/44 (68%)
Frame = -2
Query: 277 KEVATPQFTSVPLVLHDGSPPLDATQYHQLVRALQYLAITRPDI 146
K VATP TS L LH G+ DA++Y +V +LQYLA TRPDI
Sbjct: 1212 KPVATPLPTSPKLTLHGGTKLNDASEYRSVVGSLQYLAFTRPDI 1255
>emb|CAN76493.1| hypothetical protein VITISV_007584 [Vitis vinifera]
Length = 1120
Score = 64.3 bits (155), Expect(2) = 1e-16
Identities = 26/40 (65%), Positives = 36/40 (90%)
Frame = -3
Query: 144 SFAVNKLSQFMHQPTQNHWSAAKRVLCYLKNTIYHGLLLK 25
+FAVN+LSQFM +PT NHW+AAKR+L YLK T++HG++L+
Sbjct: 898 AFAVNRLSQFMQKPTTNHWAAAKRLLIYLKQTMFHGIILQ 937
Score = 47.8 bits (112), Expect(2) = 1e-16
Identities = 21/44 (47%), Positives = 29/44 (65%)
Frame = -2
Query: 277 KEVATPQFTSVPLVLHDGSPPLDATQYHQLVRALQYLAITRPDI 146
KE TP T+ L + D S +D+T Y +++ ALQYL +TRPDI
Sbjct: 854 KETLTPMSTTAKLTVQDNSECVDSTDYRKIIGALQYLGLTRPDI 897
>dbj|BAM44535.1| polyprotein [Arabidopsis thaliana]
Length = 1475
Score = 62.4 bits (150), Expect(2) = 2e-16
Identities = 29/48 (60%), Positives = 35/48 (72%)
Frame = -3
Query: 144 SFAVNKLSQFMHQPTQNHWSAAKRVLCYLKNTIYHGLLLKCGPHLILH 1
S+AVN+LSQ+MH PT +HW+A KRVL YL T HG+ LK G L LH
Sbjct: 1265 SYAVNRLSQYMHMPTDDHWNALKRVLRYLAGTPDHGIFLKKGNTLSLH 1312
Score = 48.9 bits (115), Expect(2) = 2e-16
Identities = 24/44 (54%), Positives = 29/44 (65%)
Frame = -2
Query: 277 KEVATPQFTSVPLVLHDGSPPLDATQYHQLVRALQYLAITRPDI 146
K VATP TS L LH G+ D T+Y +V +LQYLA TRPD+
Sbjct: 1221 KPVATPMATSPKLTLHSGTKLPDPTEYRGIVGSLQYLAFTRPDL 1264
>dbj|BAM44534.1| polyprotein [Arabidopsis thaliana]
Length = 1475
Score = 62.4 bits (150), Expect(2) = 2e-16
Identities = 29/48 (60%), Positives = 35/48 (72%)
Frame = -3
Query: 144 SFAVNKLSQFMHQPTQNHWSAAKRVLCYLKNTIYHGLLLKCGPHLILH 1
S+AVN+LSQ+MH PT +HW+A KRVL YL T HG+ LK G L LH
Sbjct: 1265 SYAVNRLSQYMHMPTDDHWNALKRVLRYLAGTPDHGIFLKKGNTLSLH 1312
Score = 48.9 bits (115), Expect(2) = 2e-16
Identities = 24/44 (54%), Positives = 29/44 (65%)
Frame = -2
Query: 277 KEVATPQFTSVPLVLHDGSPPLDATQYHQLVRALQYLAITRPDI 146
K VATP TS L LH G+ D T+Y +V +LQYLA TRPD+
Sbjct: 1221 KPVATPMATSPKLTLHSGTKLPDPTEYRGIVGSLQYLAFTRPDL 1264
>dbj|BAM42650.1| Polyprotein [Arabidopsis thaliana]
Length = 1475
Score = 62.4 bits (150), Expect(2) = 2e-16
Identities = 29/48 (60%), Positives = 35/48 (72%)
Frame = -3
Query: 144 SFAVNKLSQFMHQPTQNHWSAAKRVLCYLKNTIYHGLLLKCGPHLILH 1
S+AVN+LSQ+MH PT +HW+A KRVL YL T HG+ LK G L LH
Sbjct: 1265 SYAVNRLSQYMHMPTDDHWNALKRVLRYLAGTPDHGIFLKKGNTLSLH 1312
Score = 48.9 bits (115), Expect(2) = 2e-16
Identities = 24/44 (54%), Positives = 29/44 (65%)
Frame = -2
Query: 277 KEVATPQFTSVPLVLHDGSPPLDATQYHQLVRALQYLAITRPDI 146
K VATP TS L LH G+ D T+Y +V +LQYLA TRPD+
Sbjct: 1221 KPVATPMATSPKLTLHSGTKLPDPTEYRGIVGSLQYLAFTRPDL 1264
>dbj|BAM42647.1| polyprotein [Arabidopsis thaliana] gi|403406144|dbj|BAM42648.1|
polyprotein [Arabidopsis thaliana]
Length = 1475
Score = 62.4 bits (150), Expect(2) = 2e-16
Identities = 29/48 (60%), Positives = 35/48 (72%)
Frame = -3
Query: 144 SFAVNKLSQFMHQPTQNHWSAAKRVLCYLKNTIYHGLLLKCGPHLILH 1
S+AVN+LSQ+MH PT +HW+A KRVL YL T HG+ LK G L LH
Sbjct: 1265 SYAVNRLSQYMHMPTDDHWNALKRVLRYLAGTPDHGIFLKKGNTLSLH 1312
Score = 48.9 bits (115), Expect(2) = 2e-16
Identities = 24/44 (54%), Positives = 29/44 (65%)
Frame = -2
Query: 277 KEVATPQFTSVPLVLHDGSPPLDATQYHQLVRALQYLAITRPDI 146
K VATP TS L LH G+ D T+Y +V +LQYLA TRPD+
Sbjct: 1221 KPVATPMATSPKLTLHSGTKLPDPTEYRGIVGSLQYLAFTRPDL 1264
>dbj|BAM42646.1| polyprotein [Arabidopsis thaliana]
Length = 1475
Score = 62.4 bits (150), Expect(2) = 2e-16
Identities = 29/48 (60%), Positives = 35/48 (72%)
Frame = -3
Query: 144 SFAVNKLSQFMHQPTQNHWSAAKRVLCYLKNTIYHGLLLKCGPHLILH 1
S+AVN+LSQ+MH PT +HW+A KRVL YL T HG+ LK G L LH
Sbjct: 1265 SYAVNRLSQYMHMPTDDHWNALKRVLRYLAGTPDHGIFLKKGNTLSLH 1312
Score = 48.9 bits (115), Expect(2) = 2e-16
Identities = 24/44 (54%), Positives = 29/44 (65%)
Frame = -2
Query: 277 KEVATPQFTSVPLVLHDGSPPLDATQYHQLVRALQYLAITRPDI 146
K VATP TS L LH G+ D T+Y +V +LQYLA TRPD+
Sbjct: 1221 KPVATPMATSPKLTLHSGTKLPDPTEYRGIVGSLQYLAFTRPDL 1264
>gb|AAC79110.1| putative polyprotein of LTR transposon [Arabidopsis thaliana]
gi|7269781|emb|CAB77781.1| putative polyprotein of LTR
transposon [Arabidopsis thaliana]
Length = 1456
Score = 62.4 bits (150), Expect(2) = 2e-16
Identities = 29/48 (60%), Positives = 35/48 (72%)
Frame = -3
Query: 144 SFAVNKLSQFMHQPTQNHWSAAKRVLCYLKNTIYHGLLLKCGPHLILH 1
S+AVN+LSQ+MH PT +HW+A KRVL YL T HG+ LK G L LH
Sbjct: 1246 SYAVNRLSQYMHMPTDDHWNALKRVLRYLAGTPDHGIFLKKGNTLSLH 1293
Score = 48.9 bits (115), Expect(2) = 2e-16
Identities = 24/44 (54%), Positives = 29/44 (65%)
Frame = -2
Query: 277 KEVATPQFTSVPLVLHDGSPPLDATQYHQLVRALQYLAITRPDI 146
K VATP TS L LH G+ D T+Y +V +LQYLA TRPD+
Sbjct: 1202 KPVATPMATSPKLTLHSGTKLPDPTEYRGIVGSLQYLAFTRPDL 1245
>dbj|BAA78427.1| polyprotein [Arabidopsis thaliana]
Length = 1421
Score = 62.4 bits (150), Expect(2) = 2e-16
Identities = 29/48 (60%), Positives = 35/48 (72%)
Frame = -3
Query: 144 SFAVNKLSQFMHQPTQNHWSAAKRVLCYLKNTIYHGLLLKCGPHLILH 1
S+AVN+LSQ+MH PT +HW+A KRVL YL T HG+ LK G L LH
Sbjct: 1265 SYAVNRLSQYMHMPTDDHWNALKRVLRYLAGTPDHGIFLKKGNTLSLH 1312
Score = 48.9 bits (115), Expect(2) = 2e-16
Identities = 24/44 (54%), Positives = 29/44 (65%)
Frame = -2
Query: 277 KEVATPQFTSVPLVLHDGSPPLDATQYHQLVRALQYLAITRPDI 146
K VATP TS L LH G+ D T+Y +V +LQYLA TRPD+
Sbjct: 1221 KPVATPMATSPKLTLHSGTKLPDPTEYRGIVGSLQYLAFTRPDL 1264
>dbj|BAM44532.1| polyprotein [Arabidopsis thaliana]
Length = 1421
Score = 62.4 bits (150), Expect(2) = 2e-16
Identities = 29/48 (60%), Positives = 35/48 (72%)
Frame = -3
Query: 144 SFAVNKLSQFMHQPTQNHWSAAKRVLCYLKNTIYHGLLLKCGPHLILH 1
S+AVN+LSQ+MH PT +HW+A KRVL YL T HG+ LK G L LH
Sbjct: 1265 SYAVNRLSQYMHMPTDDHWNALKRVLRYLAGTPDHGIFLKKGNTLSLH 1312
Score = 48.9 bits (115), Expect(2) = 2e-16
Identities = 24/44 (54%), Positives = 29/44 (65%)
Frame = -2
Query: 277 KEVATPQFTSVPLVLHDGSPPLDATQYHQLVRALQYLAITRPDI 146
K VATP TS L LH G+ D T+Y +V +LQYLA TRPD+
Sbjct: 1221 KPVATPMATSPKLTLHSGTKLPDPTEYRGIVGSLQYLAFTRPDL 1264
>dbj|BAM44531.1| polyprotein [Arabidopsis thaliana]
Length = 1421
Score = 62.4 bits (150), Expect(2) = 2e-16
Identities = 29/48 (60%), Positives = 35/48 (72%)
Frame = -3
Query: 144 SFAVNKLSQFMHQPTQNHWSAAKRVLCYLKNTIYHGLLLKCGPHLILH 1
S+AVN+LSQ+MH PT +HW+A KRVL YL T HG+ LK G L LH
Sbjct: 1265 SYAVNRLSQYMHMPTDDHWNALKRVLRYLAGTPDHGIFLKKGNTLSLH 1312
Score = 48.9 bits (115), Expect(2) = 2e-16
Identities = 24/44 (54%), Positives = 29/44 (65%)
Frame = -2
Query: 277 KEVATPQFTSVPLVLHDGSPPLDATQYHQLVRALQYLAITRPDI 146
K VATP TS L LH G+ D T+Y +V +LQYLA TRPD+
Sbjct: 1221 KPVATPMATSPKLTLHSGTKLPDPTEYRGIVGSLQYLAFTRPDL 1264
>dbj|BAM44530.1| polyprotein [Arabidopsis thaliana]
Length = 1421
Score = 62.4 bits (150), Expect(2) = 2e-16
Identities = 29/48 (60%), Positives = 35/48 (72%)
Frame = -3
Query: 144 SFAVNKLSQFMHQPTQNHWSAAKRVLCYLKNTIYHGLLLKCGPHLILH 1
S+AVN+LSQ+MH PT +HW+A KRVL YL T HG+ LK G L LH
Sbjct: 1265 SYAVNRLSQYMHMPTDDHWNALKRVLRYLAGTPDHGIFLKKGNTLSLH 1312
Score = 48.9 bits (115), Expect(2) = 2e-16
Identities = 24/44 (54%), Positives = 29/44 (65%)
Frame = -2
Query: 277 KEVATPQFTSVPLVLHDGSPPLDATQYHQLVRALQYLAITRPDI 146
K VATP TS L LH G+ D T+Y +V +LQYLA TRPD+
Sbjct: 1221 KPVATPMATSPKLTLHSGTKLPDPTEYRGIVGSLQYLAFTRPDL 1264
>dbj|BAM44529.1| polyprotein [Arabidopsis thaliana]
Length = 1421
Score = 62.4 bits (150), Expect(2) = 2e-16
Identities = 29/48 (60%), Positives = 35/48 (72%)
Frame = -3
Query: 144 SFAVNKLSQFMHQPTQNHWSAAKRVLCYLKNTIYHGLLLKCGPHLILH 1
S+AVN+LSQ+MH PT +HW+A KRVL YL T HG+ LK G L LH
Sbjct: 1265 SYAVNRLSQYMHMPTDDHWNALKRVLRYLAGTPDHGIFLKKGNTLSLH 1312
Score = 48.9 bits (115), Expect(2) = 2e-16
Identities = 24/44 (54%), Positives = 29/44 (65%)
Frame = -2
Query: 277 KEVATPQFTSVPLVLHDGSPPLDATQYHQLVRALQYLAITRPDI 146
K VATP TS L LH G+ D T+Y +V +LQYLA TRPD+
Sbjct: 1221 KPVATPMATSPKLTLHSGTKLPDPTEYRGIVGSLQYLAFTRPDL 1264
>dbj|BAA78424.1| polyprotein [Arabidopsis thaliana] gi|404433798|dbj|BAM44533.1|
polyprotein [Arabidopsis thaliana]
Length = 1330
Score = 62.4 bits (150), Expect(2) = 2e-16
Identities = 29/48 (60%), Positives = 35/48 (72%)
Frame = -3
Query: 144 SFAVNKLSQFMHQPTQNHWSAAKRVLCYLKNTIYHGLLLKCGPHLILH 1
S+AVN+LSQ+MH PT +HW+A KRVL YL T HG+ LK G L LH
Sbjct: 1120 SYAVNRLSQYMHMPTDDHWNALKRVLRYLAGTPDHGIFLKKGNTLSLH 1167
Score = 48.9 bits (115), Expect(2) = 2e-16
Identities = 24/44 (54%), Positives = 29/44 (65%)
Frame = -2
Query: 277 KEVATPQFTSVPLVLHDGSPPLDATQYHQLVRALQYLAITRPDI 146
K VATP TS L LH G+ D T+Y +V +LQYLA TRPD+
Sbjct: 1076 KPVATPMATSPKLTLHSGTKLPDPTEYRGIVGSLQYLAFTRPDL 1119
>emb|CAN66005.1| hypothetical protein VITISV_027449 [Vitis vinifera]
Length = 793
Score = 64.3 bits (155), Expect(2) = 2e-16
Identities = 27/40 (67%), Positives = 36/40 (90%)
Frame = -3
Query: 144 SFAVNKLSQFMHQPTQNHWSAAKRVLCYLKNTIYHGLLLK 25
+FAVN+LSQFM +PT NHW+AAKR+L YLK T++HG+LL+
Sbjct: 84 AFAVNRLSQFMQKPTTNHWAAAKRLLRYLKQTMFHGILLQ 123
Score = 47.0 bits (110), Expect(2) = 2e-16
Identities = 20/44 (45%), Positives = 30/44 (68%)
Frame = -2
Query: 277 KEVATPQFTSVPLVLHDGSPPLDATQYHQLVRALQYLAITRPDI 146
+E TP T+ L + D S +D+T+Y +++ ALQYL +TRPDI
Sbjct: 40 EETLTPMSTTAKLTVQDNSECVDSTEYRKIIGALQYLGLTRPDI 83
>emb|CAN61823.1| hypothetical protein VITISV_008493 [Vitis vinifera]
Length = 414
Score = 62.8 bits (151), Expect(2) = 2e-16
Identities = 26/40 (65%), Positives = 35/40 (87%)
Frame = -3
Query: 144 SFAVNKLSQFMHQPTQNHWSAAKRVLCYLKNTIYHGLLLK 25
+F VN+LSQFM +PT NHW+AAKR+L YLK T++HG+LL+
Sbjct: 192 AFVVNRLSQFMQKPTTNHWAAAKRLLRYLKQTMFHGILLQ 231
Score = 48.5 bits (114), Expect(2) = 2e-16
Identities = 21/44 (47%), Positives = 30/44 (68%)
Frame = -2
Query: 277 KEVATPQFTSVPLVLHDGSPPLDATQYHQLVRALQYLAITRPDI 146
KE TP T+ L + D S +D+T+Y +++ ALQYL +TRPDI
Sbjct: 148 KETLTPMSTTAKLTVQDNSECVDSTEYRKIIGALQYLGLTRPDI 191
>emb|CAN71676.1| hypothetical protein VITISV_015838 [Vitis vinifera]
Length = 1352
Score = 64.3 bits (155), Expect(2) = 2e-16
Identities = 27/40 (67%), Positives = 36/40 (90%)
Frame = -3
Query: 144 SFAVNKLSQFMHQPTQNHWSAAKRVLCYLKNTIYHGLLLK 25
+FAVN+LSQFM +PT NHW+AAKR+L YLK T++HG+LL+
Sbjct: 208 AFAVNRLSQFMQKPTTNHWAAAKRLLRYLKQTMFHGILLQ 247
Score = 46.6 bits (109), Expect(2) = 2e-16
Identities = 20/44 (45%), Positives = 30/44 (68%)
Frame = -2
Query: 277 KEVATPQFTSVPLVLHDGSPPLDATQYHQLVRALQYLAITRPDI 146
KE TP T+ L + D S +D+T+Y +++ ALQYL +TRP+I
Sbjct: 164 KETLTPMSTTAKLTVQDNSECVDSTEYRKIIGALQYLGLTRPNI 207
>emb|CAN65591.1| hypothetical protein VITISV_042091 [Vitis vinifera]
Length = 1427
Score = 62.4 bits (150), Expect(2) = 4e-16
Identities = 29/47 (61%), Positives = 37/47 (78%)
Frame = -3
Query: 165 RLLDLIFSFAVNKLSQFMHQPTQNHWSAAKRVLCYLKNTIYHGLLLK 25
+L L +FAVNKL+QFMH PTQ HW+AAKR+L YLK+TI+ GL +
Sbjct: 1197 QLTRLDIAFAVNKLAQFMHAPTQTHWTAAKRLLRYLKHTIHLGLTFR 1243
Score = 47.8 bits (112), Expect(2) = 4e-16
Identities = 22/44 (50%), Positives = 31/44 (70%)
Frame = -2
Query: 277 KEVATPQFTSVPLVLHDGSPPLDATQYHQLVRALQYLAITRPDI 146
K+ +TP ++ L L+DGSPP +ATQ+ L+ LQYL +TR DI
Sbjct: 1160 KDSSTPMSSTGHLTLNDGSPPXNATQFRSLIGGLQYLQLTRLDI 1203
>emb|CAN62447.1| hypothetical protein VITISV_024007 [Vitis vinifera]
Length = 1144
Score = 64.7 bits (156), Expect(2) = 4e-16
Identities = 29/39 (74%), Positives = 33/39 (84%)
Frame = -3
Query: 141 FAVNKLSQFMHQPTQNHWSAAKRVLCYLKNTIYHGLLLK 25
FAVNKLSQFMH+PT HW+A KR+L YLK TI+HGL LK
Sbjct: 988 FAVNKLSQFMHKPTVTHWTATKRLLRYLKKTIFHGLHLK 1026
Score = 45.4 bits (106), Expect(2) = 4e-16
Identities = 20/44 (45%), Positives = 34/44 (77%)
Frame = -2
Query: 277 KEVATPQFTSVPLVLHDGSPPLDATQYHQLVRALQYLAITRPDI 146
K+V+TP T+ L L DG+ +++T+Y +++ +LQYL++TRPDI
Sbjct: 943 KDVSTPLSTTQSLHLVDGTNAVNSTEYRRVIGSLQYLSLTRPDI 986