BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus22_contig00021192
         (564 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282614.1| PREDICTED: RNA pseudourine synthase 4, mitoc...   234   9e-60
ref|XP_006487001.1| PREDICTED: RNA pseudouridine synthase 4, mit...   223   3e-56
ref|XP_006486999.1| PREDICTED: RNA pseudouridine synthase 4, mit...   223   3e-56
ref|XP_006422925.1| hypothetical protein CICLE_v10028283mg [Citr...   222   6e-56
ref|XP_007042534.1| Ribosomal pseudouridine synthase, putative [...   221   1e-55
ref|XP_006573909.1| PREDICTED: RNA pseudouridine synthase 4, mit...   210   2e-52
ref|XP_002313876.2| hypothetical protein POPTR_0009s09860g [Popu...   210   2e-52
ref|XP_003516775.1| PREDICTED: RNA pseudouridine synthase 4, mit...   210   2e-52
ref|XP_006847251.1| hypothetical protein AMTR_s00015p00025410 [A...   209   4e-52
ref|XP_002518674.1| ribosomal pseudouridine synthase, putative [...   208   7e-52
ref|XP_007157229.1| hypothetical protein PHAVU_002G053600g [Phas...   204   1e-50
gb|EXB63685.1| RNA pseudourine synthase 4 [Morus notabilis]           204   2e-50
ref|XP_006346360.1| PREDICTED: RNA pseudouridine synthase 4, mit...   202   4e-50
ref|XP_004230733.1| PREDICTED: RNA pseudourine synthase 4, mitoc...   201   8e-50
ref|XP_007199810.1| hypothetical protein PRUPE_ppa004969mg [Prun...   200   2e-49
ref|XP_004511295.1| PREDICTED: RNA pseudourine synthase 4, mitoc...   195   8e-48
ref|XP_007199809.1| hypothetical protein PRUPE_ppa004969mg [Prun...   193   2e-47
ref|XP_004305959.1| PREDICTED: RNA pseudourine synthase 4, mitoc...   192   7e-47
ref|XP_006651552.1| PREDICTED: RNA pseudouridine synthase 4, mit...   190   2e-46
tpg|DAA60656.1| TPA: hypothetical protein ZEAMMB73_133926 [Zea m...   189   4e-46

>ref|XP_002282614.1| PREDICTED: RNA pseudourine synthase 4, mitochondrial [Vitis
           vinifera] gi|296090438|emb|CBI40257.3| unnamed protein
           product [Vitis vinifera]
          Length = 476

 Score =  234 bits (598), Expect = 9e-60
 Identities = 112/160 (70%), Positives = 130/160 (81%), Gaps = 1/160 (0%)
 Frame = -2

Query: 563 IVSDTNNISSQHAVTEYRVIESSSHGYSWLELSPLTGRKHQLRVHCAEFLGTPIVGDYKY 384
           IV +   +SSQHA+TEYRVI+SS HGY+WLELSPLTGRKHQLRVHCAE LGTPIVGDYKY
Sbjct: 317 IVDNVQTMSSQHAITEYRVIKSSCHGYTWLELSPLTGRKHQLRVHCAEVLGTPIVGDYKY 376

Query: 383 GWQAHRNWMSV-PSPLKFERNKKSPNLKMDPFGLNLESGSIAEKQPRLHLHCRQMVLPNV 207
           GWQAHR W  +  S ++   ++   N K  PFGL+LESGSI +KQP LHLHC+QMVLPNV
Sbjct: 377 GWQAHRKWKQLFQSNIEKNLDENLSNRKTHPFGLDLESGSILDKQPHLHLHCKQMVLPNV 436

Query: 206 SMVLQHMQASLGCDISKLESQEFVAPLPWHMQRSWDILTS 87
           S+ LQ++Q S  CD+S+LES EFVAPLP HMQRSWDIL S
Sbjct: 437 SLALQNLQLSAECDLSELESLEFVAPLPSHMQRSWDILNS 476


>ref|XP_006487001.1| PREDICTED: RNA pseudouridine synthase 4, mitochondrial-like isoform
           X3 [Citrus sinensis]
          Length = 275

 Score =  223 bits (568), Expect = 3e-56
 Identities = 105/160 (65%), Positives = 126/160 (78%), Gaps = 1/160 (0%)
 Frame = -2

Query: 563 IVSDTNNISSQHAVTEYRVIESSSHGYSWLELSPLTGRKHQLRVHCAEFLGTPIVGDYKY 384
           +V++   +S+QHAVT Y+VI+ S HGY+WL+LSPLTGRKHQLRVHCAE LGTPIVGDYKY
Sbjct: 116 VVNNDQIMSAQHAVTRYQVIKPSCHGYTWLKLSPLTGRKHQLRVHCAEVLGTPIVGDYKY 175

Query: 383 GWQAHRNWMSV-PSPLKFERNKKSPNLKMDPFGLNLESGSIAEKQPRLHLHCRQMVLPNV 207
           GWQ HR W    PS L  + N++ P  K   FGL+LESGSI EKQPRLHLHC++M LPNV
Sbjct: 176 GWQTHRKWKQFHPSDLSKDSNEEIPKEKTLHFGLDLESGSILEKQPRLHLHCKEMTLPNV 235

Query: 206 SMVLQHMQASLGCDISKLESQEFVAPLPWHMQRSWDILTS 87
           S  +Q +Q S GCD+SKLE+ + VAPLP HMQRSWD+L S
Sbjct: 236 SQAIQKVQLSSGCDVSKLETLKLVAPLPSHMQRSWDVLNS 275


>ref|XP_006486999.1| PREDICTED: RNA pseudouridine synthase 4, mitochondrial-like isoform
           X1 [Citrus sinensis] gi|568867349|ref|XP_006487000.1|
           PREDICTED: RNA pseudouridine synthase 4,
           mitochondrial-like isoform X2 [Citrus sinensis]
          Length = 362

 Score =  223 bits (568), Expect = 3e-56
 Identities = 105/160 (65%), Positives = 126/160 (78%), Gaps = 1/160 (0%)
 Frame = -2

Query: 563 IVSDTNNISSQHAVTEYRVIESSSHGYSWLELSPLTGRKHQLRVHCAEFLGTPIVGDYKY 384
           +V++   +S+QHAVT Y+VI+ S HGY+WL+LSPLTGRKHQLRVHCAE LGTPIVGDYKY
Sbjct: 203 VVNNDQIMSAQHAVTRYQVIKPSCHGYTWLKLSPLTGRKHQLRVHCAEVLGTPIVGDYKY 262

Query: 383 GWQAHRNWMSV-PSPLKFERNKKSPNLKMDPFGLNLESGSIAEKQPRLHLHCRQMVLPNV 207
           GWQ HR W    PS L  + N++ P  K   FGL+LESGSI EKQPRLHLHC++M LPNV
Sbjct: 263 GWQTHRKWKQFHPSDLSKDSNEEIPKEKTLHFGLDLESGSILEKQPRLHLHCKEMTLPNV 322

Query: 206 SMVLQHMQASLGCDISKLESQEFVAPLPWHMQRSWDILTS 87
           S  +Q +Q S GCD+SKLE+ + VAPLP HMQRSWD+L S
Sbjct: 323 SQAIQKVQLSSGCDVSKLETLKLVAPLPSHMQRSWDVLNS 362


>ref|XP_006422925.1| hypothetical protein CICLE_v10028283mg [Citrus clementina]
           gi|557524859|gb|ESR36165.1| hypothetical protein
           CICLE_v10028283mg [Citrus clementina]
          Length = 494

 Score =  222 bits (565), Expect = 6e-56
 Identities = 105/160 (65%), Positives = 125/160 (78%), Gaps = 1/160 (0%)
 Frame = -2

Query: 563 IVSDTNNISSQHAVTEYRVIESSSHGYSWLELSPLTGRKHQLRVHCAEFLGTPIVGDYKY 384
           +V++   +S+QHAVT Y+VI+ S HGY+WL+LSPLTGRKHQLRVHCAE LGTPIVGDYKY
Sbjct: 335 VVNNDQIMSAQHAVTRYQVIKPSCHGYTWLKLSPLTGRKHQLRVHCAEVLGTPIVGDYKY 394

Query: 383 GWQAHRNWMSV-PSPLKFERNKKSPNLKMDPFGLNLESGSIAEKQPRLHLHCRQMVLPNV 207
           GWQ HR W    PS L  + N ++P  K   FGL+LESGSI EKQP LHLHC++M LPNV
Sbjct: 395 GWQTHRKWKQFHPSDLNKDSNDETPKEKTLHFGLDLESGSILEKQPGLHLHCKEMTLPNV 454

Query: 206 SMVLQHMQASLGCDISKLESQEFVAPLPWHMQRSWDILTS 87
           S  +Q +Q S GCD+SKLES + VAPLP HMQRSWD+L S
Sbjct: 455 SQAIQKVQLSSGCDVSKLESLKLVAPLPSHMQRSWDVLNS 494


>ref|XP_007042534.1| Ribosomal pseudouridine synthase, putative [Theobroma cacao]
           gi|508706469|gb|EOX98365.1| Ribosomal pseudouridine
           synthase, putative [Theobroma cacao]
          Length = 477

 Score =  221 bits (562), Expect = 1e-55
 Identities = 104/160 (65%), Positives = 127/160 (79%), Gaps = 1/160 (0%)
 Frame = -2

Query: 563 IVSDTNNISSQHAVTEYRVIESSSHGYSWLELSPLTGRKHQLRVHCAEFLGTPIVGDYKY 384
           +  ++  +SSQ A TEY+VI+++SHGY+WLELSPLTGRKHQLRVHCAE LGTPIVGDYKY
Sbjct: 318 VFDNSQIVSSQRAKTEYQVIKTTSHGYTWLELSPLTGRKHQLRVHCAEVLGTPIVGDYKY 377

Query: 383 GWQAHRNWMSVP-SPLKFERNKKSPNLKMDPFGLNLESGSIAEKQPRLHLHCRQMVLPNV 207
           GWQAHR W  +P S LK   N K P   M PFGLN++SGSI+ K+PRLHLHCR+M+ PNV
Sbjct: 378 GWQAHRRWQHLPESDLKKSSNDKCPEENMLPFGLNMDSGSISAKRPRLHLHCREMIFPNV 437

Query: 206 SMVLQHMQASLGCDISKLESQEFVAPLPWHMQRSWDILTS 87
           S  LQ++Q S   D+SKL+S E VAPLP +MQ+SWDI+ S
Sbjct: 438 SQALQNLQLSTDHDLSKLKSLEVVAPLPSYMQKSWDIMNS 477


>ref|XP_006573909.1| PREDICTED: RNA pseudouridine synthase 4, mitochondrial-like isoform
           X2 [Glycine max]
          Length = 429

 Score =  210 bits (535), Expect = 2e-52
 Identities = 99/156 (63%), Positives = 120/156 (76%)
 Frame = -2

Query: 563 IVSDTNNISSQHAVTEYRVIESSSHGYSWLELSPLTGRKHQLRVHCAEFLGTPIVGDYKY 384
           IV ++  +SSQHA+TEYRVI SSS GY+WLEL+PLTGRKHQLRVHCAE LGTPIVGDYKY
Sbjct: 271 IVDNSTLMSSQHAITEYRVIASSSQGYTWLELTPLTGRKHQLRVHCAEVLGTPIVGDYKY 330

Query: 383 GWQAHRNWMSVPSPLKFERNKKSPNLKMDPFGLNLESGSIAEKQPRLHLHCRQMVLPNVS 204
           GWQAHR W     P   +  ++  N +  PFGLNL  GSI+E  PRLHLHC+QMVLPN+S
Sbjct: 331 GWQAHRKWGHFDLPNVEDSREELLNEEKLPFGLNLNKGSISENHPRLHLHCKQMVLPNIS 390

Query: 203 MVLQHMQASLGCDISKLESQEFVAPLPWHMQRSWDI 96
             LQ++Q++  CD+S +E  E VA LP +MQRSWD+
Sbjct: 391 QALQNVQSASSCDLSLVEELELVADLPPYMQRSWDV 426


>ref|XP_002313876.2| hypothetical protein POPTR_0009s09860g [Populus trichocarpa]
           gi|550331407|gb|EEE87831.2| hypothetical protein
           POPTR_0009s09860g [Populus trichocarpa]
          Length = 471

 Score =  210 bits (535), Expect = 2e-52
 Identities = 104/158 (65%), Positives = 127/158 (80%), Gaps = 1/158 (0%)
 Frame = -2

Query: 563 IVSDTNNISSQHAVTEYRVIESSSHGYSWLELSPLTGRKHQLRVHCAEFLGTPIVGDYKY 384
           +V ++ N+SSQHAVT+YRVIESS HG++WLELSPLTGRKHQLRVHCAE LGTPIVGDYKY
Sbjct: 313 VVENSQNLSSQHAVTQYRVIESS-HGFTWLELSPLTGRKHQLRVHCAEVLGTPIVGDYKY 371

Query: 383 GWQAHRNWMSVP-SPLKFERNKKSPNLKMDPFGLNLESGSIAEKQPRLHLHCRQMVLPNV 207
            WQAHRNW  +  S ++   N KS + K+ PF L+L+SGSI+EK PRLHLHC+QMVLP+V
Sbjct: 372 AWQAHRNWKQLQWSNIEDNSNDKSLSEKILPFALDLDSGSISEKHPRLHLHCKQMVLPDV 431

Query: 206 SMVLQHMQASLGCDISKLESQEFVAPLPWHMQRSWDIL 93
           S  LQ +Q S   D S+L S +F APLP +M++SWDIL
Sbjct: 432 SKALQDVQLSSDYDFSQLASLKFDAPLPPYMKKSWDIL 469


>ref|XP_003516775.1| PREDICTED: RNA pseudouridine synthase 4, mitochondrial-like isoform
           X1 [Glycine max]
          Length = 427

 Score =  210 bits (535), Expect = 2e-52
 Identities = 99/156 (63%), Positives = 120/156 (76%)
 Frame = -2

Query: 563 IVSDTNNISSQHAVTEYRVIESSSHGYSWLELSPLTGRKHQLRVHCAEFLGTPIVGDYKY 384
           IV ++  +SSQHA+TEYRVI SSS GY+WLEL+PLTGRKHQLRVHCAE LGTPIVGDYKY
Sbjct: 269 IVDNSTLMSSQHAITEYRVIASSSQGYTWLELTPLTGRKHQLRVHCAEVLGTPIVGDYKY 328

Query: 383 GWQAHRNWMSVPSPLKFERNKKSPNLKMDPFGLNLESGSIAEKQPRLHLHCRQMVLPNVS 204
           GWQAHR W     P   +  ++  N +  PFGLNL  GSI+E  PRLHLHC+QMVLPN+S
Sbjct: 329 GWQAHRKWGHFDLPNVEDSREELLNEEKLPFGLNLNKGSISENHPRLHLHCKQMVLPNIS 388

Query: 203 MVLQHMQASLGCDISKLESQEFVAPLPWHMQRSWDI 96
             LQ++Q++  CD+S +E  E VA LP +MQRSWD+
Sbjct: 389 QALQNVQSASSCDLSLVEELELVADLPPYMQRSWDV 424


>ref|XP_006847251.1| hypothetical protein AMTR_s00015p00025410 [Amborella trichopoda]
           gi|548850328|gb|ERN08832.1| hypothetical protein
           AMTR_s00015p00025410 [Amborella trichopoda]
          Length = 457

 Score =  209 bits (532), Expect = 4e-52
 Identities = 99/161 (61%), Positives = 122/161 (75%), Gaps = 2/161 (1%)
 Frame = -2

Query: 563 IVSDTNNISSQHAVTEYRVIESSSHGYSWLELSPLTGRKHQLRVHCAEFLGTPIVGDYKY 384
           +  D+ N S++HA+TEYRV+ SS HG++WLEL P TGRKHQLRVHCAE LGTPI+GDYKY
Sbjct: 301 VSEDSKNKSARHAITEYRVLRSSGHGFTWLELYPRTGRKHQLRVHCAEVLGTPILGDYKY 360

Query: 383 GWQAHRNWMSVPSPLKFER--NKKSPNLKMDPFGLNLESGSIAEKQPRLHLHCRQMVLPN 210
           GW AHR W   P+ LKFE   N+K+      PFGL+LE GS+++K+PRLHLHCRQM LPN
Sbjct: 361 GWNAHRKWKPFPT-LKFEERLNRKA------PFGLDLEGGSVSDKKPRLHLHCRQMTLPN 413

Query: 209 VSMVLQHMQASLGCDISKLESQEFVAPLPWHMQRSWDILTS 87
           +S+  QH+      D+SKLE  + VAPLP HM+RSWDIL S
Sbjct: 414 MSLAFQHLHEQSVDDLSKLEKLDLVAPLPLHMRRSWDILNS 454


>ref|XP_002518674.1| ribosomal pseudouridine synthase, putative [Ricinus communis]
           gi|223542055|gb|EEF43599.1| ribosomal pseudouridine
           synthase, putative [Ricinus communis]
          Length = 536

 Score =  208 bits (530), Expect = 7e-52
 Identities = 103/160 (64%), Positives = 124/160 (77%), Gaps = 1/160 (0%)
 Frame = -2

Query: 563 IVSDTNNISSQHAVTEYRVIESSSHGYSWLELSPLTGRKHQLRVHCAEFLGTPIVGDYKY 384
           +V +  + S QHAVT+YRV+ESS HGY+WLELSP+TGRKHQLRVHCAE LGTPIVGDYKY
Sbjct: 378 VVENAESTSFQHAVTQYRVMESS-HGYAWLELSPITGRKHQLRVHCAEVLGTPIVGDYKY 436

Query: 383 GWQAHRNWMSVPSP-LKFERNKKSPNLKMDPFGLNLESGSIAEKQPRLHLHCRQMVLPNV 207
           GWQ HR W  +P P L+   N+ +   K+ PFG++LESGSI+EK PRLHLHC+QMVLP+V
Sbjct: 437 GWQVHRKWKQLPFPNLEKISNENALCKKILPFGIDLESGSISEKHPRLHLHCKQMVLPDV 496

Query: 206 SMVLQHMQASLGCDISKLESQEFVAPLPWHMQRSWDILTS 87
           S  L+ +Q S   D S L+S E  APLP +MQRSWDIL S
Sbjct: 497 SQALRGVQTSSNYDFSDLKSIELDAPLPSYMQRSWDILNS 536


>ref|XP_007157229.1| hypothetical protein PHAVU_002G053600g [Phaseolus vulgaris]
           gi|561030644|gb|ESW29223.1| hypothetical protein
           PHAVU_002G053600g [Phaseolus vulgaris]
          Length = 432

 Score =  204 bits (520), Expect = 1e-50
 Identities = 98/158 (62%), Positives = 124/158 (78%), Gaps = 2/158 (1%)
 Frame = -2

Query: 563 IVSDTNNISSQHAVTEYRVIESSSHGYSWLELSPLTGRKHQLRVHCAEFLGTPIVGDYKY 384
           +V ++ ++SSQHA+TEYRVI SSS GY+WLELSPLTGRKHQLRVHCAE LGTPIVGDYKY
Sbjct: 274 VVDNSTSLSSQHAITEYRVIASSSQGYTWLELSPLTGRKHQLRVHCAEVLGTPIVGDYKY 333

Query: 383 GWQAHRNWMSVPSPLKFERNKKSPNLKMD--PFGLNLESGSIAEKQPRLHLHCRQMVLPN 210
           GWQAHR W +    L    +    +LK +  PFGLNL +GSI+E +PRLHLHC+++VLPN
Sbjct: 334 GWQAHRKWGNF--DLSNVEDSCEEHLKEETLPFGLNLNNGSISENRPRLHLHCKKIVLPN 391

Query: 209 VSMVLQHMQASLGCDISKLESQEFVAPLPWHMQRSWDI 96
           +S  LQ++Q+   CD+S++E  + VA LP +MQRSWDI
Sbjct: 392 ISEALQNVQSFSNCDLSQVEGLQLVADLPPYMQRSWDI 429


>gb|EXB63685.1| RNA pseudourine synthase 4 [Morus notabilis]
          Length = 470

 Score =  204 bits (518), Expect = 2e-50
 Identities = 97/160 (60%), Positives = 125/160 (78%), Gaps = 1/160 (0%)
 Frame = -2

Query: 563 IVSDTNNISSQHAVTEYRVIESSSHGYSWLELSPLTGRKHQLRVHCAEFLGTPIVGDYKY 384
           +V+ ++ +SSQHA+T+Y+VI SSSHGY+WLELSPLTGRKHQLRVHCAE LGTP+VGDYKY
Sbjct: 311 VVNGSHTLSSQHAITKYKVIGSSSHGYTWLELSPLTGRKHQLRVHCAEVLGTPMVGDYKY 370

Query: 383 GWQAHRNWMSVPSPLKFER-NKKSPNLKMDPFGLNLESGSIAEKQPRLHLHCRQMVLPNV 207
           GWQAHR+W  +  P    +  +  P  K  PFGLN+++GSI+EK PRLHLHC+QMVLPN+
Sbjct: 371 GWQAHRDWKPLHWPDPDNKCIEVLPKRKNLPFGLNMDNGSISEKHPRLHLHCKQMVLPNI 430

Query: 206 SMVLQHMQASLGCDISKLESQEFVAPLPWHMQRSWDILTS 87
           S VLQ++Q     ++S+LE  +  APLP +MQRSW +  S
Sbjct: 431 SHVLQNVQRYSDYELSRLERLKLDAPLPSYMQRSWHLTNS 470


>ref|XP_006346360.1| PREDICTED: RNA pseudouridine synthase 4, mitochondrial-like
           [Solanum tuberosum]
          Length = 467

 Score =  202 bits (515), Expect = 4e-50
 Identities = 98/160 (61%), Positives = 118/160 (73%), Gaps = 1/160 (0%)
 Frame = -2

Query: 563 IVSDTNNISSQHAVTEYRVIESSSHGYSWLELSPLTGRKHQLRVHCAEFLGTPIVGDYKY 384
           I+SD    S+Q+AVTEYR+I SS  GY+WLELSPLTGRKHQLRVHCAE LGTPIVGDYKY
Sbjct: 308 IMSDVRAPSAQYAVTEYRIIGSSEKGYTWLELSPLTGRKHQLRVHCAEALGTPIVGDYKY 367

Query: 383 GWQAHRNWMSVPSPLK-FERNKKSPNLKMDPFGLNLESGSIAEKQPRLHLHCRQMVLPNV 207
           GWQAHR    +P P        + P  K DPF L L +GSI++KQP LHLHC++MVLPN+
Sbjct: 368 GWQAHRKLKHLPLPTSVLNLGVQIPRQKPDPFNLRLGNGSISDKQPHLHLHCKEMVLPNI 427

Query: 206 SMVLQHMQASLGCDISKLESQEFVAPLPWHMQRSWDILTS 87
           S+ LQ  Q     D+  +ES + VAPLP+HMQ+SWD L+S
Sbjct: 428 SLALQRAQVVSDTDLVDVESIKLVAPLPFHMQKSWDCLSS 467


>ref|XP_004230733.1| PREDICTED: RNA pseudourine synthase 4, mitochondrial-like [Solanum
           lycopersicum]
          Length = 467

 Score =  201 bits (512), Expect = 8e-50
 Identities = 97/160 (60%), Positives = 118/160 (73%), Gaps = 1/160 (0%)
 Frame = -2

Query: 563 IVSDTNNISSQHAVTEYRVIESSSHGYSWLELSPLTGRKHQLRVHCAEFLGTPIVGDYKY 384
           I+SD    S+Q+AVTEYR+I SS  GY+WLELSPLTGRKHQLRVHCAE LGTPIVGDYKY
Sbjct: 308 IMSDVREPSAQYAVTEYRIIGSSEKGYTWLELSPLTGRKHQLRVHCAEALGTPIVGDYKY 367

Query: 383 GWQAHRNWMSVPSPLK-FERNKKSPNLKMDPFGLNLESGSIAEKQPRLHLHCRQMVLPNV 207
           GWQAHR    +P P        + P  K DPF L L +GSI++KQP LHLHC++MVLPN+
Sbjct: 368 GWQAHRKLKHLPLPTSVLNLVVEIPRQKPDPFNLRLGNGSISDKQPHLHLHCKEMVLPNI 427

Query: 206 SMVLQHMQASLGCDISKLESQEFVAPLPWHMQRSWDILTS 87
           S+ LQ  Q     D+  +ES + VAPLP+HMQ+SWD L++
Sbjct: 428 SLALQRAQVVSDADLVDVESIKLVAPLPFHMQKSWDCLSA 467


>ref|XP_007199810.1| hypothetical protein PRUPE_ppa004969mg [Prunus persica]
           gi|462395210|gb|EMJ01009.1| hypothetical protein
           PRUPE_ppa004969mg [Prunus persica]
          Length = 483

 Score =  200 bits (508), Expect = 2e-49
 Identities = 98/164 (59%), Positives = 121/164 (73%), Gaps = 5/164 (3%)
 Frame = -2

Query: 563 IVSDTNNISSQHAVTEYRVIESSSHGYSWLELSPLTGRKHQLRVHCAEFLGTPIVGDYKY 384
           IV+D+  + SQHA+T+Y+VI S   GY+WLEL+PLTGRKHQLRVHCAE L TPIVGDYKY
Sbjct: 324 IVNDSQTLPSQHAITKYKVIGSPCPGYTWLELTPLTGRKHQLRVHCAEVLRTPIVGDYKY 383

Query: 383 GWQAHRNWMSVPSPLKFERN-----KKSPNLKMDPFGLNLESGSIAEKQPRLHLHCRQMV 219
           GWQ HRNW     PL +  N     ++ P  K  PF LN+ESGS++EK PRLHLHC+QMV
Sbjct: 384 GWQTHRNW----KPLAWSNNECHSDEEFPKRKNLPFDLNMESGSVSEKNPRLHLHCKQMV 439

Query: 218 LPNVSMVLQHMQASLGCDISKLESQEFVAPLPWHMQRSWDILTS 87
           LPNV++ LQ+++     D+S+LES E VA LP  MQRSW+I  S
Sbjct: 440 LPNVNLALQNVKLHSDSDLSELESLELVAALPSFMQRSWNITNS 483


>ref|XP_004511295.1| PREDICTED: RNA pseudourine synthase 4, mitochondrial-like [Cicer
           arietinum]
          Length = 458

 Score =  195 bits (495), Expect = 8e-48
 Identities = 94/161 (58%), Positives = 120/161 (74%), Gaps = 2/161 (1%)
 Frame = -2

Query: 563 IVSDTNNISSQHAVTEYRVIESSSHGYSWLELSPLTGRKHQLRVHCAEFLGTPIVGDYKY 384
           IV+++  +SSQHAVTEYRV+ SSS GY+WLELSPLTGRKHQLRVHCAE LGTPIVGDYKY
Sbjct: 298 IVNNSTLVSSQHAVTEYRVLGSSSDGYTWLELSPLTGRKHQLRVHCAEVLGTPIVGDYKY 357

Query: 383 GWQAHRNWMSVPSPLKFERNKKSPNLKMDPFGLNLESGSIAEKQPRLHLHCRQMVLPNVS 204
           GWQAH+ W         +  ++    +  PFGLNL  GSI++K PRLHLHC+Q++LPN+S
Sbjct: 358 GWQAHKKWGHFDLCNLEDSTEELLKEETLPFGLNLNKGSISDKHPRLHLHCKQIILPNIS 417

Query: 203 MVLQHMQ--ASLGCDISKLESQEFVAPLPWHMQRSWDILTS 87
             LQ +Q  ++  CD+S +E+ +  A LP +MQRSWD+  S
Sbjct: 418 QALQDVQSLSASNCDLSVVEALKLEAELPPYMQRSWDVTNS 458


>ref|XP_007199809.1| hypothetical protein PRUPE_ppa004969mg [Prunus persica]
           gi|462395209|gb|EMJ01008.1| hypothetical protein
           PRUPE_ppa004969mg [Prunus persica]
          Length = 481

 Score =  193 bits (491), Expect = 2e-47
 Identities = 97/164 (59%), Positives = 120/164 (73%), Gaps = 5/164 (3%)
 Frame = -2

Query: 563 IVSDTNNISSQHAVTEYRVIESSSHGYSWLELSPLTGRKHQLRVHCAEFLGTPIVGDYKY 384
           IV+D+  + SQHA+T+Y+VI S    Y+WLEL+PLTGRKHQLRVHCAE L TPIVGDYKY
Sbjct: 324 IVNDSQTLPSQHAITKYKVIGSPC--YTWLELTPLTGRKHQLRVHCAEVLRTPIVGDYKY 381

Query: 383 GWQAHRNWMSVPSPLKFERNK-----KSPNLKMDPFGLNLESGSIAEKQPRLHLHCRQMV 219
           GWQ HRNW     PL +  N+     + P  K  PF LN+ESGS++EK PRLHLHC+QMV
Sbjct: 382 GWQTHRNW----KPLAWSNNECHSDEEFPKRKNLPFDLNMESGSVSEKNPRLHLHCKQMV 437

Query: 218 LPNVSMVLQHMQASLGCDISKLESQEFVAPLPWHMQRSWDILTS 87
           LPNV++ LQ+++     D+S+LES E VA LP  MQRSW+I  S
Sbjct: 438 LPNVNLALQNVKLHSDSDLSELESLELVAALPSFMQRSWNITNS 481


>ref|XP_004305959.1| PREDICTED: RNA pseudourine synthase 4, mitochondrial-like [Fragaria
           vesca subsp. vesca]
          Length = 476

 Score =  192 bits (487), Expect = 7e-47
 Identities = 94/164 (57%), Positives = 120/164 (73%), Gaps = 1/164 (0%)
 Frame = -2

Query: 563 IVSDTNNISSQHAVTEYRVIESSSHGYSWLELSPLTGRKHQLRVHCAEFLGTPIVGDYKY 384
           I++    + SQHA+T+Y+VI SS  G++WLEL PLTGRKHQLRVHCAE LGTPIVGDYKY
Sbjct: 307 ILNKAQCLPSQHAITKYKVIGSSCPGFTWLELIPLTGRKHQLRVHCAEVLGTPIVGDYKY 366

Query: 383 GWQAHRNWMSVP-SPLKFERNKKSPNLKMDPFGLNLESGSIAEKQPRLHLHCRQMVLPNV 207
           GW+ H++W  V  S  +   N++    K  PF LN++SGSI EK  RLHLH +QMVLPNV
Sbjct: 367 GWRTHKDWKPVAWSKTECHSNEERSKRKNLPFDLNMDSGSIDEKNLRLHLHSKQMVLPNV 426

Query: 206 SMVLQHMQASLGCDISKLESQEFVAPLPWHMQRSWDILTS*TDK 75
           S+ LQ+++    CD+S LES E VAP+P +MQ+SWDI  S  D+
Sbjct: 427 SLALQNVKLHAECDLSGLESIELVAPMPSYMQKSWDITNSCFDR 470


>ref|XP_006651552.1| PREDICTED: RNA pseudouridine synthase 4, mitochondrial-like [Oryza
           brachyantha]
          Length = 447

 Score =  190 bits (483), Expect = 2e-46
 Identities = 93/157 (59%), Positives = 115/157 (73%)
 Frame = -2

Query: 557 SDTNNISSQHAVTEYRVIESSSHGYSWLELSPLTGRKHQLRVHCAEFLGTPIVGDYKYGW 378
           + +N  S Q A+TEYRVIE   HGY+WLEL P TGRKHQLRVHCAE LGTPIVGDYKYG 
Sbjct: 290 ASSNAASVQDALTEYRVIEYCPHGYTWLELFPRTGRKHQLRVHCAEVLGTPIVGDYKYGR 349

Query: 377 QAHRNWMSVPSPLKFERNKKSPNLKMDPFGLNLESGSIAEKQPRLHLHCRQMVLPNVSMV 198
           QAH+NWM +P P     N++    +  PFGL +  GSIAE+QP+LHLHC+QMVLP++S+ 
Sbjct: 350 QAHQNWMPLPLPRTI--NEELLRKRKLPFGLVVGGGSIAEEQPQLHLHCKQMVLPDISVA 407

Query: 197 LQHMQASLGCDISKLESQEFVAPLPWHMQRSWDILTS 87
           +  +Q+ +  D S LE   FVAPLP HM+ SW+IL S
Sbjct: 408 VHRLQSDVDPDFSDLEKLNFVAPLPLHMRLSWEILKS 444


>tpg|DAA60656.1| TPA: hypothetical protein ZEAMMB73_133926 [Zea mays]
          Length = 503

 Score =  189 bits (480), Expect = 4e-46
 Identities = 94/160 (58%), Positives = 115/160 (71%), Gaps = 1/160 (0%)
 Frame = -2

Query: 563 IVSDTNNISSQHAVTEYRVIESSSHGYSWLELSPLTGRKHQLRVHCAEFLGTPIVGDYKY 384
           + + +N  S Q A+TEYRVIES   GY+WLEL P TGRKHQLRVHCAE LGTPIVGDYKY
Sbjct: 343 VCAGSNTASVQDALTEYRVIESFPQGYTWLELFPRTGRKHQLRVHCAEVLGTPIVGDYKY 402

Query: 383 GWQAHRNWMSVPSPLKFERNKKSPNLKMDPFGLNLESGSIAEKQPRLHLHCRQMVLPNVS 204
           G QAH+NWM +P P   +  K+    +  PFGL L  GS+AE+QP+LHLHC+QM+LP++S
Sbjct: 403 GRQAHQNWMPLPMPQTID--KEMLKKRKLPFGLTLGGGSVAEQQPQLHLHCKQMILPDIS 460

Query: 203 MVLQHMQAS-LGCDISKLESQEFVAPLPWHMQRSWDILTS 87
             +Q +++S    D S LE   FVAPLP HMQ SW IL S
Sbjct: 461 AAMQQLRSSDADHDFSDLEKLSFVAPLPLHMQLSWKILLS 500