BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus22_contig00021183
         (433 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002511082.1| pentatricopeptide repeat-containing protein,...    70   2e-10
ref|XP_006651297.1| PREDICTED: pentatricopeptide repeat-containi...    70   3e-10
ref|XP_004984658.1| PREDICTED: pentatricopeptide repeat-containi...    69   7e-10
ref|XP_003561711.1| PREDICTED: pentatricopeptide repeat-containi...    68   2e-09
emb|CBI15765.3| unnamed protein product [Vitis vinifera]               68   2e-09
gb|AFW88636.1| hypothetical protein ZEAMMB73_169634 [Zea mays]         67   3e-09
emb|CAN83162.1| hypothetical protein VITISV_022557 [Vitis vinifera]    65   1e-08
ref|XP_002280974.1| PREDICTED: pentatricopeptide repeat-containi...    64   2e-08
ref|XP_004172298.1| PREDICTED: putative pentatricopeptide repeat...    64   3e-08
ref|XP_004137894.1| PREDICTED: putative pentatricopeptide repeat...    64   3e-08
gb|EMT31980.1| Pentatricopeptide repeat-containing protein [Aegi...    63   4e-08
gb|EEC75067.1| hypothetical protein OsI_11193 [Oryza sativa Indi...    63   4e-08
gb|EEE58895.1| hypothetical protein OsJ_10524 [Oryza sativa Japo...    62   6e-08
ref|XP_004300372.1| PREDICTED: pentatricopeptide repeat-containi...    62   8e-08
ref|XP_002970294.1| hypothetical protein SELMODRAFT_93439 [Selag...    62   1e-07
ref|XP_006485076.1| PREDICTED: pentatricopeptide repeat-containi...    60   2e-07
ref|XP_007207552.1| hypothetical protein PRUPE_ppa017672mg [Prun...    60   4e-07
ref|XP_002468001.1| hypothetical protein SORBIDRAFT_01g037845 [S...    59   5e-07
ref|XP_004137281.1| PREDICTED: pentatricopeptide repeat-containi...    59   9e-07
ref|XP_003612377.1| Selenium binding protein-like protein [Medic...    59   9e-07

>ref|XP_002511082.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223550197|gb|EEF51684.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 274

 Score = 70.5 bits (171), Expect = 2e-10
 Identities = 31/56 (55%), Positives = 43/56 (76%)
 Frame = +2

Query: 263 DHQTISYALEACKITLDLVTAIKAHARIVKSGFDSYPSLLASLISVYLSCDQFDHA 430
           D+Q   + LEACK++LDL TAI+ HARI++ G+ +YPSL ASL+S Y+ CD F+ A
Sbjct: 9   DYQLFIHLLEACKLSLDLKTAIETHARIIRFGYGTYPSLAASLVSTYVKCDHFNLA 64


>ref|XP_006651297.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g50990-like [Oryza brachyantha]
          Length = 555

 Score = 70.1 bits (170), Expect = 3e-10
 Identities = 39/105 (37%), Positives = 62/105 (59%)
 Frame = +2

Query: 116 TKCLREYSSIARISQHLSNSMIRASIEKGAPEKALHDYKTIVLSGATRPDHQTISYALEA 295
           T CLR+Y    R     +N+++RAS+EKG+P+K+L DY +++   A  PD++T    L+A
Sbjct: 4   THCLRKYP--VRAVFPYTNAILRASLEKGSPQKSLTDYNSMLRFTAFCPDYRTYVLLLKA 61

Query: 296 CKITLDLVTAIKAHARIVKSGFDSYPSLLASLISVYLSCDQFDHA 430
           C    +L  A++ H+RIVK G  S  S+   L  +Y+  D+   A
Sbjct: 62  CAKCSNLYAAMEIHSRIVKLGLLSNQSITTHLFKLYIDHDRMTEA 106


>ref|XP_004984658.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g50990-like isoform X1 [Setaria italica]
          Length = 555

 Score = 68.9 bits (167), Expect = 7e-10
 Identities = 37/99 (37%), Positives = 61/99 (61%)
 Frame = +2

Query: 122 CLREYSSIARISQHLSNSMIRASIEKGAPEKALHDYKTIVLSGATRPDHQTISYALEACK 301
           CLR++    RI    +NS++RAS+EKG+P+K+L DY+T++   A  PD++T +  L+AC 
Sbjct: 6   CLRKHPY--RIVFPYANSILRASLEKGSPQKSLMDYRTLLHFSAFCPDYRTYALLLKACA 63

Query: 302 ITLDLVTAIKAHARIVKSGFDSYPSLLASLISVYLSCDQ 418
              DL  A++ H  + K G  S   L   L+ +Y++ D+
Sbjct: 64  RCSDLYAAMEIHCHLTKVGLLSNQHLTPPLLKLYIAHDR 102


>ref|XP_003561711.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g50990-like [Brachypodium distachyon]
          Length = 555

 Score = 67.8 bits (164), Expect = 2e-09
 Identities = 35/100 (35%), Positives = 61/100 (61%)
 Frame = +2

Query: 116 TKCLREYSSIARISQHLSNSMIRASIEKGAPEKALHDYKTIVLSGATRPDHQTISYALEA 295
           T CL+++ +  R+    +NS++RAS+EKG+P+K+L DY T++ S    PD++T    L A
Sbjct: 4   TNCLKKHPT--RLFFPYANSILRASLEKGSPQKSLMDYGTMLNSTTFCPDYRTYGILLRA 61

Query: 296 CKITLDLVTAIKAHARIVKSGFDSYPSLLASLISVYLSCD 415
           C    D+  A++ H+R+ K G      ++A L+ +Y+  D
Sbjct: 62  CLKYSDIYAAMQIHSRLTKVGLLRNQHIIAPLLRLYIDYD 101


>emb|CBI15765.3| unnamed protein product [Vitis vinifera]
          Length = 375

 Score = 67.8 bits (164), Expect = 2e-09
 Identities = 30/60 (50%), Positives = 42/60 (70%)
 Frame = +2

Query: 251 ATRPDHQTISYALEACKITLDLVTAIKAHARIVKSGFDSYPSLLASLISVYLSCDQFDHA 430
           +T PDHQ ++  LEACK + D  TA ++HA+I+K G+ +YPSL+ SL+S Y  CD  D A
Sbjct: 42  STIPDHQKLNCILEACKFSSDFRTAFQSHAKIIKFGYGTYPSLITSLVSTYAHCDCLDLA 101


>gb|AFW88636.1| hypothetical protein ZEAMMB73_169634 [Zea mays]
          Length = 555

 Score = 67.0 bits (162), Expect = 3e-09
 Identities = 36/98 (36%), Positives = 56/98 (57%)
 Frame = +2

Query: 116 TKCLREYSSIARISQHLSNSMIRASIEKGAPEKALHDYKTIVLSGATRPDHQTISYALEA 295
           T CL+++    RI     NS++RAS+EKG+P+K L DY T++   A  PD++T ++ L A
Sbjct: 4   TNCLKKHPY--RIFFRYGNSILRASLEKGSPQKLLMDYSTLLHFTAFCPDYRTYAFLLRA 61

Query: 296 CKITLDLVTAIKAHARIVKSGFDSYPSLLASLISVYLS 409
           C    DL  A++ H  + K G  S   +   L  +Y+S
Sbjct: 62  CAKCSDLYAAMEIHCHLTKVGLLSKQHITPPLFKLYIS 99


>emb|CAN83162.1| hypothetical protein VITISV_022557 [Vitis vinifera]
          Length = 562

 Score = 64.7 bits (156), Expect = 1e-08
 Identities = 30/70 (42%), Positives = 42/70 (60%)
 Frame = +2

Query: 221 HDYKTIVLSGATRPDHQTISYALEACKITLDLVTAIKAHARIVKSGFDSYPSLLASLISV 400
           HD+           DHQ ++  LEACK + D  TA ++HA+I+K G+ +YPSL+ SL+S 
Sbjct: 44  HDFSGTTDMVIQERDHQKLNCILEACKFSSDFRTAFQSHAKIIKFGYGTYPSLITSLVST 103

Query: 401 YLSCDQFDHA 430
           Y  CD  D A
Sbjct: 104 YAHCDCLDLA 113


>ref|XP_002280974.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50990
           [Vitis vinifera]
          Length = 523

 Score = 63.9 bits (154), Expect = 2e-08
 Identities = 28/56 (50%), Positives = 39/56 (69%)
 Frame = +2

Query: 263 DHQTISYALEACKITLDLVTAIKAHARIVKSGFDSYPSLLASLISVYLSCDQFDHA 430
           DHQ ++  LEACK + D  TA ++HA+I+K G+ +YPSL+ SL+S Y  CD  D A
Sbjct: 19  DHQKLNCILEACKFSSDFRTAFQSHAKIIKFGYGTYPSLITSLVSTYAHCDCLDLA 74


>ref|XP_004172298.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g08820-like [Cucumis sativus]
          Length = 688

 Score = 63.5 bits (153), Expect = 3e-08
 Identities = 34/99 (34%), Positives = 57/99 (57%)
 Frame = +2

Query: 134 YSSIARISQHLSNSMIRASIEKGAPEKALHDYKTIVLSGATRPDHQTISYALEACKITLD 313
           +S +   +  L N+MIR  + K   + A+H Y ++   G   P++ TI + L+AC   LD
Sbjct: 71  FSQVKEPNIFLWNTMIRGLVSKDCFDDAIHLYGSM-RGGGFLPNNFTIPFVLKACARKLD 129

Query: 314 LVTAIKAHARIVKSGFDSYPSLLASLISVYLSCDQFDHA 430
           +   +K H+ +VK+G+D    +  SL+S+Y+ CD FD A
Sbjct: 130 VRLGLKIHSLLVKAGYDHDVFVKTSLLSLYVKCDNFDDA 168


>ref|XP_004137894.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g08820-like [Cucumis sativus]
          Length = 688

 Score = 63.5 bits (153), Expect = 3e-08
 Identities = 34/99 (34%), Positives = 57/99 (57%)
 Frame = +2

Query: 134 YSSIARISQHLSNSMIRASIEKGAPEKALHDYKTIVLSGATRPDHQTISYALEACKITLD 313
           +S +   +  L N+MIR  + K   + A+H Y ++   G   P++ TI + L+AC   LD
Sbjct: 71  FSQVKEPNIFLWNTMIRGLVSKDCFDDAIHLYGSM-RGGGFLPNNFTIPFVLKACARKLD 129

Query: 314 LVTAIKAHARIVKSGFDSYPSLLASLISVYLSCDQFDHA 430
           +   +K H+ +VK+G+D    +  SL+S+Y+ CD FD A
Sbjct: 130 VRLGLKIHSLLVKAGYDHDVFVKTSLLSLYVKCDNFDDA 168


>gb|EMT31980.1| Pentatricopeptide repeat-containing protein [Aegilops tauschii]
          Length = 781

 Score = 63.2 bits (152), Expect = 4e-08
 Identities = 32/97 (32%), Positives = 58/97 (59%)
 Frame = +2

Query: 116 TKCLREYSSIARISQHLSNSMIRASIEKGAPEKALHDYKTIVLSGATRPDHQTISYALEA 295
           T CL+++    R+    +NS++RAS+EKG+P+K+L DY T++      PD++T    L A
Sbjct: 4   TSCLKKHP--LRLIFPYANSILRASLEKGSPQKSLMDYSTMLHFITFCPDYRTYVLLLRA 61

Query: 296 CKITLDLVTAIKAHARIVKSGFDSYPSLLASLISVYL 406
           C    D+  A++ H+ + K+G      ++A L+ +Y+
Sbjct: 62  CSKCSDIYAAMQIHSHLTKAGLLCNQDIIAPLLRLYI 98


>gb|EEC75067.1| hypothetical protein OsI_11193 [Oryza sativa Indica Group]
          Length = 619

 Score = 63.2 bits (152), Expect = 4e-08
 Identities = 37/111 (33%), Positives = 62/111 (55%), Gaps = 3/111 (2%)
 Frame = +2

Query: 83  LQASFSTGICV---TKCLREYSSIARISQHLSNSMIRASIEKGAPEKALHDYKTIVLSGA 253
           L  +F   IC    T CLR Y    R     +N+++RAS+EKG+PEK+L DY +++   A
Sbjct: 93  LVIAFEKLICTMSYTNCLRRYP--VRAIFPYTNAILRASLEKGSPEKSLTDYNSMLRFTA 150

Query: 254 TRPDHQTISYALEACKITLDLVTAIKAHARIVKSGFDSYPSLLASLISVYL 406
             PD++T    L+AC    ++   ++ H+++VK G  S   ++  L  +Y+
Sbjct: 151 FCPDYRTYVLLLKACAKCSNIYAIMEIHSQLVKLGLLSNQRIVTHLFKLYI 201


>gb|EEE58895.1| hypothetical protein OsJ_10524 [Oryza sativa Japonica Group]
          Length = 901

 Score = 62.4 bits (150), Expect = 6e-08
 Identities = 36/108 (33%), Positives = 60/108 (55%), Gaps = 3/108 (2%)
 Frame = +2

Query: 92  SFSTGICV---TKCLREYSSIARISQHLSNSMIRASIEKGAPEKALHDYKTIVLSGATRP 262
           +F   IC    T CLR Y    R     +N+++RAS+EKG+PEK+L DY +++   A  P
Sbjct: 92  AFEKLICTMSYTNCLRRYP--VRAIFPYTNAILRASLEKGSPEKSLTDYNSMLRFTAFCP 149

Query: 263 DHQTISYALEACKITLDLVTAIKAHARIVKSGFDSYPSLLASLISVYL 406
           D++T    L+AC    ++   ++ H+ +VK G  S   ++  L  +Y+
Sbjct: 150 DYRTYVLLLKACAKCSNIYAIMEIHSHLVKLGLLSNQRIVTHLFKLYI 197


>ref|XP_004300372.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g50990-like [Fragaria vesca subsp. vesca]
          Length = 555

 Score = 62.0 bits (149), Expect = 8e-08
 Identities = 27/50 (54%), Positives = 38/50 (76%)
 Frame = +2

Query: 263 DHQTISYALEACKITLDLVTAIKAHARIVKSGFDSYPSLLASLISVYLSC 412
           +HQ + + L++CK+ LD  TAI+ HARIV  G+ +YPSLLASL++VY  C
Sbjct: 51  EHQKLHHVLKSCKLHLDSATAIQTHARIVTRGYGTYPSLLASLLAVYKRC 100


>ref|XP_002970294.1| hypothetical protein SELMODRAFT_93439 [Selaginella moellendorffii]
           gi|300161810|gb|EFJ28424.1| hypothetical protein
           SELMODRAFT_93439 [Selaginella moellendorffii]
          Length = 1096

 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 30/87 (34%), Positives = 50/87 (57%)
 Frame = +2

Query: 170 NSMIRASIEKGAPEKALHDYKTIVLSGATRPDHQTISYALEACKITLDLVTAIKAHARIV 349
           N++I A+ + G  + A+  ++ + L G+ RP+  T    ++AC   LDL      H RI+
Sbjct: 196 NALIAANAQNGHCKDAMQVFQLMDLDGSVRPNDATFVSVVDACSNLLDLPRGKSTHERII 255

Query: 350 KSGFDSYPSLLASLISVYLSCDQFDHA 430
           ++GFDSY  +  SL+++Y  C   DHA
Sbjct: 256 RTGFDSYLFVGNSLVNMYGKCGSVDHA 282


>ref|XP_006485076.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g50990-like [Citrus sinensis]
          Length = 537

 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 26/57 (45%), Positives = 39/57 (68%)
 Frame = +2

Query: 263 DHQTISYALEACKITLDLVTAIKAHARIVKSGFDSYPSLLASLISVYLSCDQFDHAS 433
           DH+ +   LE+CK  L+L    + H RI+K GF++YPS++ASL+S Y  CD+F  A+
Sbjct: 33  DHRALCGVLESCKCNLELRVVSQTHTRIIKCGFETYPSVVASLMSAYKHCDKFGLAN 89


>ref|XP_007207552.1| hypothetical protein PRUPE_ppa017672mg [Prunus persica]
           gi|462403194|gb|EMJ08751.1| hypothetical protein
           PRUPE_ppa017672mg [Prunus persica]
          Length = 745

 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 36/111 (32%), Positives = 61/111 (54%)
 Frame = +2

Query: 98  STGICVTKCLREYSSIARISQHLSNSMIRASIEKGAPEKALHDYKTIVLSGATRPDHQTI 277
           S+ I +   LR ++ I   +  + N+M+RA I++  P+KAL+ YK +V   A  PD+ T 
Sbjct: 23  SSFIHIDLSLRIFNLIEDANGFIWNTMMRAYIQRNCPQKALNLYKLMVDKNA-EPDNYTY 81

Query: 278 SYALEACKITLDLVTAIKAHARIVKSGFDSYPSLLASLISVYLSCDQFDHA 430
              ++AC I +      + H  I+K+GFDS   +  +LI++Y  C+    A
Sbjct: 82  PLLVQACAIRVSEFEGRQIHNHILKTGFDSDVYVQNTLINIYAVCENMSDA 132


>ref|XP_002468001.1| hypothetical protein SORBIDRAFT_01g037845 [Sorghum bicolor]
           gi|241921855|gb|EER94999.1| hypothetical protein
           SORBIDRAFT_01g037845 [Sorghum bicolor]
          Length = 99

 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 33/90 (36%), Positives = 52/90 (57%), Gaps = 3/90 (3%)
 Frame = +2

Query: 86  QASFSTGIC---VTKCLREYSSIARISQHLSNSMIRASIEKGAPEKALHDYKTIVLSGAT 256
           + SF   +C    T CL+++    RI     NS++RAS+EKG+P+K+L DY T++   A 
Sbjct: 7   ELSFQKLVCNMSYTNCLKKHPH--RIFFRYGNSILRASLEKGSPQKSLMDYSTLLHFTAF 64

Query: 257 RPDHQTISYALEACKITLDLVTAIKAHARI 346
            PD++T +  L AC    DL  A++ H  +
Sbjct: 65  FPDYRTYALLLRACAKCSDLYAAMEIHCHL 94


>ref|XP_004137281.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39350-like [Cucumis sativus]
          Length = 787

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 32/115 (27%), Positives = 58/115 (50%)
 Frame = +2

Query: 68  HCRRHLQASFSTGICVTKCLREYSSIARISQHLSNSMIRASIEKGAPEKALHDYKTIVLS 247
           H   HL  S++   CV    + +  ++  S  L N++I+  ++KG    AL  + +++ S
Sbjct: 118 HLPSHLAVSYAFCGCVPLARKLFDDLSDPSLFLWNAIIKMYVDKGFHFDALRVFDSMICS 177

Query: 248 GATRPDHQTISYALEACKITLDLVTAIKAHARIVKSGFDSYPSLLASLISVYLSC 412
           G   PD  T    ++AC +   L   +  H R + SGF S   +  SL+++Y++C
Sbjct: 178 GKCWPDKYTFPLVIKACSVMSMLNVGVLIHGRALVSGFSSNMFVQNSLLAMYMNC 232


>ref|XP_003612377.1| Selenium binding protein-like protein [Medicago truncatula]
           gi|355513712|gb|AES95335.1| Selenium binding
           protein-like protein [Medicago truncatula]
          Length = 611

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 33/113 (29%), Positives = 58/113 (51%), Gaps = 8/113 (7%)
 Frame = +2

Query: 110 CVTKCLREYSSIARI--------SQHLSNSMIRASIEKGAPEKALHDYKTIVLSGATRPD 265
           CV     EY + A +        + ++ NSMI+   +   P  +LH YK ++ +G + PD
Sbjct: 48  CVDSHFDEYFNYANLLFRQIHSPNVYIFNSMIKGYAKSNNPTMSLHLYKQMLQNGYS-PD 106

Query: 266 HQTISYALEACKITLDLVTAIKAHARIVKSGFDSYPSLLASLISVYLSCDQFD 424
           H T  + L+AC    D V+    H+ I+KSGF++   +   L+++Y+ C   +
Sbjct: 107 HFTFPFVLKACSFIYDQVSGKCVHSCILKSGFEANVYVATGLLNMYVECKNME 159