BLASTX nr result
ID: Cocculus22_contig00020993
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus22_contig00020993
(399 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006358787.1| PREDICTED: pentatricopeptide repeat-containi... 138 9e-31
ref|XP_004248026.1| PREDICTED: pentatricopeptide repeat-containi... 138 9e-31
gb|EYU27896.1| hypothetical protein MIMGU_mgv1a005951mg [Mimulus... 133 3e-29
ref|XP_002268375.1| PREDICTED: pentatricopeptide repeat-containi... 132 4e-29
emb|CAN80394.1| hypothetical protein VITISV_001596 [Vitis vinifera] 132 6e-29
gb|EXB93122.1| hypothetical protein L484_024459 [Morus notabilis] 127 2e-27
ref|XP_007030290.1| Pentatricopeptide repeat (PPR) superfamily p... 126 4e-27
ref|XP_004504788.1| PREDICTED: pentatricopeptide repeat-containi... 125 5e-27
gb|EPS58676.1| hypothetical protein M569_16136, partial [Genlise... 125 6e-27
ref|XP_004142520.1| PREDICTED: pentatricopeptide repeat-containi... 125 6e-27
ref|XP_002325369.2| hypothetical protein POPTR_0019s04240g [Popu... 125 8e-27
ref|XP_007206771.1| hypothetical protein PRUPE_ppa025361mg [Prun... 124 1e-26
ref|XP_002522032.1| pentatricopeptide repeat-containing protein,... 123 3e-26
ref|XP_006479008.1| PREDICTED: pentatricopeptide repeat-containi... 122 4e-26
ref|XP_004296694.1| PREDICTED: pentatricopeptide repeat-containi... 122 4e-26
ref|XP_006830661.1| hypothetical protein AMTR_s00210p00017530 [A... 122 5e-26
ref|XP_006287650.1| hypothetical protein CARUB_v10000860mg, part... 121 9e-26
ref|XP_002871814.1| pentatricopeptide repeat-containing protein ... 121 9e-26
gb|AAK48986.1|AF370559_1 Unknown protein [Arabidopsis thaliana] ... 120 1e-25
ref|NP_197340.1| pentatricopeptide repeat-containing protein [Ar... 120 1e-25
>ref|XP_006358787.1| PREDICTED: pentatricopeptide repeat-containing protein At5g18390,
mitochondrial-like isoform X1 [Solanum tuberosum]
gi|565385886|ref|XP_006358788.1| PREDICTED:
pentatricopeptide repeat-containing protein At5g18390,
mitochondrial-like isoform X2 [Solanum tuberosum]
gi|565385889|ref|XP_006358789.1| PREDICTED:
pentatricopeptide repeat-containing protein At5g18390,
mitochondrial-like isoform X3 [Solanum tuberosum]
Length = 472
Score = 138 bits (347), Expect = 9e-31
Identities = 66/80 (82%), Positives = 73/80 (91%)
Frame = +2
Query: 2 FFSDMKAQGHQPNRPVYTMLIKMCVRGGRFVDAANCLVEMTELNLLPRSESFDMVTDGLK 181
FFS+MK +GH PNRP+YTMLIKMC RGGRFV+A+N LVEMTELNLLP S SFDMVTDGLK
Sbjct: 392 FFSEMKLKGHPPNRPLYTMLIKMCSRGGRFVEASNYLVEMTELNLLPMSRSFDMVTDGLK 451
Query: 182 NCGKYDLAKRMEQLEISHKG 241
NCGK+DLAKR+EQLEIS KG
Sbjct: 452 NCGKHDLAKRIEQLEISVKG 471
>ref|XP_004248026.1| PREDICTED: pentatricopeptide repeat-containing protein At5g18390,
mitochondrial-like [Solanum lycopersicum]
Length = 470
Score = 138 bits (347), Expect = 9e-31
Identities = 66/80 (82%), Positives = 72/80 (90%)
Frame = +2
Query: 2 FFSDMKAQGHQPNRPVYTMLIKMCVRGGRFVDAANCLVEMTELNLLPRSESFDMVTDGLK 181
FFSDMK +GH PNRP+YTMLIKMC RGGRFV+A+N LVEMTELNLLP S SFD VTDGLK
Sbjct: 390 FFSDMKVKGHPPNRPLYTMLIKMCCRGGRFVEASNYLVEMTELNLLPMSRSFDTVTDGLK 449
Query: 182 NCGKYDLAKRMEQLEISHKG 241
NCGK+DLAKR+EQLEIS KG
Sbjct: 450 NCGKHDLAKRIEQLEISVKG 469
>gb|EYU27896.1| hypothetical protein MIMGU_mgv1a005951mg [Mimulus guttatus]
Length = 463
Score = 133 bits (334), Expect = 3e-29
Identities = 63/80 (78%), Positives = 71/80 (88%)
Frame = +2
Query: 2 FFSDMKAQGHQPNRPVYTMLIKMCVRGGRFVDAANCLVEMTELNLLPRSESFDMVTDGLK 181
FF+DMK +GH PNRPVYTMLI+MCVRGGR V+A N L+EMTELNL P S+SFDMV DGLK
Sbjct: 383 FFADMKVKGHPPNRPVYTMLIRMCVRGGRCVEAGNYLMEMTELNLSPMSQSFDMVCDGLK 442
Query: 182 NCGKYDLAKRMEQLEISHKG 241
NCGK+DLAKRMEQLEIS +G
Sbjct: 443 NCGKHDLAKRMEQLEISLRG 462
>ref|XP_002268375.1| PREDICTED: pentatricopeptide repeat-containing protein At5g18390,
mitochondrial [Vitis vinifera]
gi|296085168|emb|CBI28663.3| unnamed protein product
[Vitis vinifera]
Length = 454
Score = 132 bits (333), Expect = 4e-29
Identities = 63/80 (78%), Positives = 70/80 (87%)
Frame = +2
Query: 2 FFSDMKAQGHQPNRPVYTMLIKMCVRGGRFVDAANCLVEMTELNLLPRSESFDMVTDGLK 181
FFSDMK +GH PNRPVYTMLI MC RGGRFVDAAN LVEMTELNL P S FDMVTDGLK
Sbjct: 374 FFSDMKVKGHPPNRPVYTMLITMCGRGGRFVDAANYLVEMTELNLTPISRCFDMVTDGLK 433
Query: 182 NCGKYDLAKRMEQLEISHKG 241
NCGK+DLA+++EQLE+S +G
Sbjct: 434 NCGKHDLARKIEQLEVSLRG 453
>emb|CAN80394.1| hypothetical protein VITISV_001596 [Vitis vinifera]
Length = 356
Score = 132 bits (331), Expect = 6e-29
Identities = 63/80 (78%), Positives = 69/80 (86%)
Frame = +2
Query: 2 FFSDMKAQGHQPNRPVYTMLIKMCVRGGRFVDAANCLVEMTELNLLPRSESFDMVTDGLK 181
FFSDMK +GH PNRPVYTMLI MC RGGRFVDAAN LVEMTELNL P S FDMVTDGLK
Sbjct: 274 FFSDMKVKGHPPNRPVYTMLITMCGRGGRFVDAANYLVEMTELNLTPISRCFDMVTDGLK 333
Query: 182 NCGKYDLAKRMEQLEISHKG 241
NCGK+DLA+++EQLE+S G
Sbjct: 334 NCGKHDLARKIEQLEVSLSG 353
>gb|EXB93122.1| hypothetical protein L484_024459 [Morus notabilis]
Length = 470
Score = 127 bits (318), Expect = 2e-27
Identities = 59/80 (73%), Positives = 68/80 (85%)
Frame = +2
Query: 2 FFSDMKAQGHQPNRPVYTMLIKMCVRGGRFVDAANCLVEMTELNLLPRSESFDMVTDGLK 181
FF +MK +GH PNRPVYTMLI MC RGGRFVDAAN LVEMTE+ L P S FD+VTDGLK
Sbjct: 390 FFGEMKVKGHPPNRPVYTMLITMCGRGGRFVDAANYLVEMTEIGLTPISRCFDLVTDGLK 449
Query: 182 NCGKYDLAKRMEQLEISHKG 241
NCGK+DLA+R+EQLE+S +G
Sbjct: 450 NCGKHDLARRIEQLEVSARG 469
>ref|XP_007030290.1| Pentatricopeptide repeat (PPR) superfamily protein [Theobroma
cacao] gi|508718895|gb|EOY10792.1| Pentatricopeptide
repeat (PPR) superfamily protein [Theobroma cacao]
Length = 455
Score = 126 bits (316), Expect = 4e-27
Identities = 60/80 (75%), Positives = 67/80 (83%)
Frame = +2
Query: 2 FFSDMKAQGHQPNRPVYTMLIKMCVRGGRFVDAANCLVEMTELNLLPRSESFDMVTDGLK 181
FF +MK +GH PNRPVYTMLI MC RGGRFV+AAN LVEMTEL L P S FDMV DGLK
Sbjct: 375 FFGEMKVKGHSPNRPVYTMLITMCGRGGRFVEAANYLVEMTELGLAPISRCFDMVIDGLK 434
Query: 182 NCGKYDLAKRMEQLEISHKG 241
NCGK+DLAKR+EQLE+S +G
Sbjct: 435 NCGKHDLAKRIEQLEVSLRG 454
>ref|XP_004504788.1| PREDICTED: pentatricopeptide repeat-containing protein At5g18390,
mitochondrial-like isoform X1 [Cicer arietinum]
gi|502142093|ref|XP_004504789.1| PREDICTED:
pentatricopeptide repeat-containing protein At5g18390,
mitochondrial-like isoform X2 [Cicer arietinum]
Length = 453
Score = 125 bits (315), Expect = 5e-27
Identities = 58/80 (72%), Positives = 68/80 (85%)
Frame = +2
Query: 2 FFSDMKAQGHQPNRPVYTMLIKMCVRGGRFVDAANCLVEMTELNLLPRSESFDMVTDGLK 181
FF+DMK +GH PNRP+YTMLI MC RGGRFVDAAN L EMTE+ +P S FDMVTDGLK
Sbjct: 373 FFADMKVKGHPPNRPLYTMLITMCGRGGRFVDAANYLFEMTEIGFVPISRCFDMVTDGLK 432
Query: 182 NCGKYDLAKRMEQLEISHKG 241
NCGK+DLAKR++QLE+S +G
Sbjct: 433 NCGKHDLAKRVQQLEVSIRG 452
>gb|EPS58676.1| hypothetical protein M569_16136, partial [Genlisea aurea]
Length = 419
Score = 125 bits (314), Expect = 6e-27
Identities = 56/76 (73%), Positives = 69/76 (90%)
Frame = +2
Query: 2 FFSDMKAQGHQPNRPVYTMLIKMCVRGGRFVDAANCLVEMTELNLLPRSESFDMVTDGLK 181
FFS+MK +GH PNRP+YTML+K+CVRGGRFV+AAN LVEM ELNLLP S+SFDMV DGLK
Sbjct: 337 FFSEMKVKGHVPNRPIYTMLVKLCVRGGRFVEAANYLVEMIELNLLPMSKSFDMVCDGLK 396
Query: 182 NCGKYDLAKRMEQLEI 229
CGKYDLA+R++++E+
Sbjct: 397 KCGKYDLAQRIQRMEM 412
>ref|XP_004142520.1| PREDICTED: pentatricopeptide repeat-containing protein At5g18390,
mitochondrial-like [Cucumis sativus]
gi|449518358|ref|XP_004166209.1| PREDICTED:
pentatricopeptide repeat-containing protein At5g18390,
mitochondrial-like [Cucumis sativus]
Length = 455
Score = 125 bits (314), Expect = 6e-27
Identities = 60/80 (75%), Positives = 67/80 (83%)
Frame = +2
Query: 2 FFSDMKAQGHQPNRPVYTMLIKMCVRGGRFVDAANCLVEMTELNLLPRSESFDMVTDGLK 181
FF DMK +GH PNRPVYTMLI MC RGGRFVDAAN L+EM EL L P S FDMVTDGLK
Sbjct: 375 FFGDMKHKGHPPNRPVYTMLITMCGRGGRFVDAANYLMEMAELGLPPISRCFDMVTDGLK 434
Query: 182 NCGKYDLAKRMEQLEISHKG 241
NCGK+DLAK++EQLE+S +G
Sbjct: 435 NCGKHDLAKKIEQLEVSIRG 454
>ref|XP_002325369.2| hypothetical protein POPTR_0019s04240g [Populus trichocarpa]
gi|550316751|gb|EEE99750.2| hypothetical protein
POPTR_0019s04240g [Populus trichocarpa]
Length = 333
Score = 125 bits (313), Expect = 8e-27
Identities = 58/80 (72%), Positives = 69/80 (86%)
Frame = +2
Query: 2 FFSDMKAQGHQPNRPVYTMLIKMCVRGGRFVDAANCLVEMTELNLLPRSESFDMVTDGLK 181
FFS+MK +GH PNRPVYTM+I MC RGG+ V+AAN LVEMTE+ L+P S FDMVTDGLK
Sbjct: 253 FFSEMKVKGHPPNRPVYTMMITMCGRGGKHVEAANYLVEMTEIGLVPISRCFDMVTDGLK 312
Query: 182 NCGKYDLAKRMEQLEISHKG 241
NCGK+DLAKR+EQLE+S +G
Sbjct: 313 NCGKHDLAKRIEQLEVSLRG 332
>ref|XP_007206771.1| hypothetical protein PRUPE_ppa025361mg [Prunus persica]
gi|462402413|gb|EMJ07970.1| hypothetical protein
PRUPE_ppa025361mg [Prunus persica]
Length = 460
Score = 124 bits (311), Expect = 1e-26
Identities = 58/80 (72%), Positives = 69/80 (86%)
Frame = +2
Query: 2 FFSDMKAQGHQPNRPVYTMLIKMCVRGGRFVDAANCLVEMTELNLLPRSESFDMVTDGLK 181
FFS+MK +GH PNRPVYTMLI M RGGRFV+AAN LVEMTE+ L+P S FD+VTDGLK
Sbjct: 380 FFSEMKVKGHPPNRPVYTMLITMSGRGGRFVEAANYLVEMTEMGLMPISRCFDLVTDGLK 439
Query: 182 NCGKYDLAKRMEQLEISHKG 241
NCGK+D+AKR+EQLE+S +G
Sbjct: 440 NCGKHDMAKRIEQLEVSLRG 459
>ref|XP_002522032.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223538836|gb|EEF40436.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 451
Score = 123 bits (308), Expect = 3e-26
Identities = 57/77 (74%), Positives = 66/77 (85%)
Frame = +2
Query: 2 FFSDMKAQGHQPNRPVYTMLIKMCVRGGRFVDAANCLVEMTELNLLPRSESFDMVTDGLK 181
FF +MK +GH PNRPVYTMLI MC RGG++V+AAN LVEMTE+ L P S FDMVTDGLK
Sbjct: 371 FFGEMKVKGHPPNRPVYTMLITMCGRGGKYVEAANYLVEMTEMGLTPISRCFDMVTDGLK 430
Query: 182 NCGKYDLAKRMEQLEIS 232
NCGK+DLAKR+EQLE+S
Sbjct: 431 NCGKHDLAKRIEQLEVS 447
>ref|XP_006479008.1| PREDICTED: pentatricopeptide repeat-containing protein At5g18390,
mitochondrial-like [Citrus sinensis]
Length = 445
Score = 122 bits (307), Expect = 4e-26
Identities = 57/77 (74%), Positives = 67/77 (87%)
Frame = +2
Query: 2 FFSDMKAQGHQPNRPVYTMLIKMCVRGGRFVDAANCLVEMTELNLLPRSESFDMVTDGLK 181
FFS+MK +GH PNRPVYTMLI MC RGGRFV+AAN LVEMTE+ L P S FD+VTDGLK
Sbjct: 365 FFSEMKIKGHPPNRPVYTMLITMCGRGGRFVEAANYLVEMTEMGLTPISRCFDLVTDGLK 424
Query: 182 NCGKYDLAKRMEQLEIS 232
NCGK+DLA+++EQLE+S
Sbjct: 425 NCGKHDLAEKIEQLEVS 441
>ref|XP_004296694.1| PREDICTED: pentatricopeptide repeat-containing protein At5g18390,
mitochondrial-like [Fragaria vesca subsp. vesca]
Length = 444
Score = 122 bits (307), Expect = 4e-26
Identities = 57/80 (71%), Positives = 68/80 (85%)
Frame = +2
Query: 2 FFSDMKAQGHQPNRPVYTMLIKMCVRGGRFVDAANCLVEMTELNLLPRSESFDMVTDGLK 181
FFS+MK +GH PNRPVYTMLI M RGGRFV+AAN L+EMTE+ L+P S FD VTDGLK
Sbjct: 364 FFSEMKVKGHPPNRPVYTMLITMAGRGGRFVEAANYLIEMTEVGLVPISRCFDFVTDGLK 423
Query: 182 NCGKYDLAKRMEQLEISHKG 241
NCGK+DLAKR+EQ+E+S +G
Sbjct: 424 NCGKHDLAKRIEQIEVSLRG 443
>ref|XP_006830661.1| hypothetical protein AMTR_s00210p00017530 [Amborella trichopoda]
gi|548837251|gb|ERM98077.1| hypothetical protein
AMTR_s00210p00017530 [Amborella trichopoda]
Length = 459
Score = 122 bits (306), Expect = 5e-26
Identities = 58/79 (73%), Positives = 67/79 (84%)
Frame = +2
Query: 5 FSDMKAQGHQPNRPVYTMLIKMCVRGGRFVDAANCLVEMTELNLLPRSESFDMVTDGLKN 184
F+DMKA+GH PNRPVYTML++MC RGGR VDAAN LVEM E L PRSESFDMV DGLKN
Sbjct: 380 FADMKAEGHAPNRPVYTMLMRMCCRGGRCVDAANYLVEMVERGLAPRSESFDMVIDGLKN 439
Query: 185 CGKYDLAKRMEQLEISHKG 241
GK+DLAKR++ +EIS +G
Sbjct: 440 AGKHDLAKRIDHMEISLRG 458
>ref|XP_006287650.1| hypothetical protein CARUB_v10000860mg, partial [Capsella rubella]
gi|482556356|gb|EOA20548.1| hypothetical protein
CARUB_v10000860mg, partial [Capsella rubella]
Length = 477
Score = 121 bits (304), Expect = 9e-26
Identities = 58/80 (72%), Positives = 66/80 (82%)
Frame = +2
Query: 2 FFSDMKAQGHQPNRPVYTMLIKMCVRGGRFVDAANCLVEMTELNLLPRSESFDMVTDGLK 181
FFSDMK + H PNRPVYTMLI MC RGG+FVDAAN LVEMTE+ L+P S FDMVTDGLK
Sbjct: 397 FFSDMKVKAHPPNRPVYTMLITMCGRGGKFVDAANYLVEMTEMGLVPISRCFDMVTDGLK 456
Query: 182 NCGKYDLAKRMEQLEISHKG 241
N GK+DLA R+EQLE+ +G
Sbjct: 457 NSGKHDLAMRIEQLEVQLRG 476
>ref|XP_002871814.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297317651|gb|EFH48073.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 459
Score = 121 bits (304), Expect = 9e-26
Identities = 58/80 (72%), Positives = 66/80 (82%)
Frame = +2
Query: 2 FFSDMKAQGHQPNRPVYTMLIKMCVRGGRFVDAANCLVEMTELNLLPRSESFDMVTDGLK 181
FFSDMK + H PNRPVYTMLI MC RGG+FVDAAN LVEMTE+ L+P S FDMVTDGLK
Sbjct: 379 FFSDMKVKAHPPNRPVYTMLITMCGRGGKFVDAANYLVEMTEMGLVPISRCFDMVTDGLK 438
Query: 182 NCGKYDLAKRMEQLEISHKG 241
N GK+DLA R+EQLE+ +G
Sbjct: 439 NSGKHDLAMRIEQLEVQLRG 458
>gb|AAK48986.1|AF370559_1 Unknown protein [Arabidopsis thaliana] gi|27311979|gb|AAO00955.1|
Unknown protein [Arabidopsis thaliana]
Length = 186
Score = 120 bits (302), Expect = 1e-25
Identities = 58/80 (72%), Positives = 66/80 (82%)
Frame = +2
Query: 2 FFSDMKAQGHQPNRPVYTMLIKMCVRGGRFVDAANCLVEMTELNLLPRSESFDMVTDGLK 181
FFSDMK + H PNRPVYTMLI MC RGG+FVDAAN LVEMTE+ L+P S FDMVTDGLK
Sbjct: 106 FFSDMKVKAHPPNRPVYTMLITMCGRGGKFVDAANYLVEMTEMGLVPISRCFDMVTDGLK 165
Query: 182 NCGKYDLAKRMEQLEISHKG 241
N GK+DLA R+EQLE+ +G
Sbjct: 166 NGGKHDLAMRIEQLEVQLRG 185
>ref|NP_197340.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635760|sp|Q94JX6.2|PP391_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At5g18390, mitochondrial; Flags: Precursor
gi|332005166|gb|AED92549.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
Length = 459
Score = 120 bits (302), Expect = 1e-25
Identities = 58/80 (72%), Positives = 66/80 (82%)
Frame = +2
Query: 2 FFSDMKAQGHQPNRPVYTMLIKMCVRGGRFVDAANCLVEMTELNLLPRSESFDMVTDGLK 181
FFSDMK + H PNRPVYTMLI MC RGG+FVDAAN LVEMTE+ L+P S FDMVTDGLK
Sbjct: 379 FFSDMKVKAHPPNRPVYTMLITMCGRGGKFVDAANYLVEMTEMGLVPISRCFDMVTDGLK 438
Query: 182 NCGKYDLAKRMEQLEISHKG 241
N GK+DLA R+EQLE+ +G
Sbjct: 439 NGGKHDLAMRIEQLEVQLRG 458