BLASTX nr result
ID: Cocculus22_contig00020863
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus22_contig00020863
(403 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002528999.1| ATP-dependent RNA helicase, putative [Ricinu... 80 3e-13
ref|XP_004300262.1| PREDICTED: ATP-dependent RNA helicase DHX29-... 78 1e-12
ref|XP_006494371.1| PREDICTED: ATP-dependent RNA helicase DHX29-... 75 1e-11
ref|XP_006494370.1| PREDICTED: ATP-dependent RNA helicase DHX29-... 75 1e-11
ref|XP_006431713.1| hypothetical protein CICLE_v100000301mg, par... 75 1e-11
ref|XP_006431712.1| hypothetical protein CICLE_v100000301mg [Cit... 75 1e-11
ref|XP_006431711.1| hypothetical protein CICLE_v100000301mg [Cit... 75 1e-11
ref|XP_002263889.1| PREDICTED: ATP-dependent RNA helicase DHX29 ... 74 3e-11
gb|EXB29033.1| ATP-dependent RNA helicase DHX29 [Morus notabilis] 73 5e-11
gb|EYU26490.1| hypothetical protein MIMGU_mgv1a000218mg [Mimulus... 70 3e-10
ref|XP_007225464.1| hypothetical protein PRUPE_ppa000230mg [Prun... 68 1e-09
ref|XP_007041296.1| ATP-dependent RNA helicase, putative isoform... 66 4e-09
ref|XP_007041294.1| ATP-dependent RNA helicase, putative isoform... 66 4e-09
ref|XP_006385022.1| hypothetical protein POPTR_0004s231602g, par... 63 5e-08
ref|XP_004146280.1| PREDICTED: ATP-dependent RNA helicase Dhx29-... 62 6e-08
ref|XP_004159882.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri... 62 1e-07
ref|XP_006600261.1| PREDICTED: ATP-dependent RNA helicase Dhx29-... 59 7e-07
ref|XP_006600260.1| PREDICTED: ATP-dependent RNA helicase Dhx29-... 59 7e-07
ref|XP_006600259.1| PREDICTED: ATP-dependent RNA helicase Dhx29-... 59 7e-07
gb|AAG50701.1|AC079604_8 hypothetical protein [Arabidopsis thali... 58 2e-06
>ref|XP_002528999.1| ATP-dependent RNA helicase, putative [Ricinus communis]
gi|223531539|gb|EEF33369.1| ATP-dependent RNA helicase,
putative [Ricinus communis]
Length = 1509
Score = 80.1 bits (196), Expect = 3e-13
Identities = 51/138 (36%), Positives = 72/138 (52%), Gaps = 5/138 (3%)
Frame = -3
Query: 401 EILASE-IDDYNTKDAAYGLETRDSLETMGMGDNGSEADH----IADKIELTADENIMQH 237
++LA E + ++ + G+ T + S+A+ + EL AD N M+
Sbjct: 268 DVLAQEFVHEHTSAFVPEGISTSSMPHEQLLAKTSSDAESNLVFVLPSEELPADPNDMES 327
Query: 236 QSSGVCDVIHDSLTIPAQESATGDDEEADVELSDLFSEDCITSGTLPPEVLKLQKKEKMA 57
S V ++P Q +DE AD+EL F ED ++ LPPEVL+LQKKEKM
Sbjct: 328 PSYMEFPVELAPSSVPVQGKIDLEDETADMELGGFFMEDATSNEALPPEVLELQKKEKMK 387
Query: 56 QQSNGLKLEKLDGIWKKG 3
+ S+ LEKLDGIWKKG
Sbjct: 388 KLSSEKNLEKLDGIWKKG 405
>ref|XP_004300262.1| PREDICTED: ATP-dependent RNA helicase DHX29-like [Fragaria vesca
subsp. vesca]
Length = 1456
Score = 77.8 bits (190), Expect = 1e-12
Identities = 51/135 (37%), Positives = 71/135 (52%), Gaps = 2/135 (1%)
Frame = -3
Query: 401 EILASEIDDYNTKDAAYGL--ETRDSLETMGMGDNGSEADHIADKIELTADENIMQHQSS 228
+ILASE + + + AY +T S E D G AD EL AD N M+ SS
Sbjct: 281 DILASEFEQEQSIERAYSAFEDTDTSSEPYKQAD-GLHAD------ELKADGNDMEPCSS 333
Query: 227 GVCDVIHDSLTIPAQESATGDDEEADVELSDLFSEDCITSGTLPPEVLKLQKKEKMAQQS 48
+ +P QE ++E D+E+ + F ED ++ L P +L+LQKKEK+ +
Sbjct: 334 VQLPINSTPSDLPVQEKIAAEEETTDMEIGNFFLEDAPSNDFLTPTILELQKKEKLREML 393
Query: 47 NGLKLEKLDGIWKKG 3
+ LEKLDGIWKKG
Sbjct: 394 SEKNLEKLDGIWKKG 408
>ref|XP_006494371.1| PREDICTED: ATP-dependent RNA helicase DHX29-like isoform X2 [Citrus
sinensis]
Length = 1245
Score = 74.7 bits (182), Expect = 1e-11
Identities = 54/138 (39%), Positives = 75/138 (54%), Gaps = 5/138 (3%)
Frame = -3
Query: 401 EILASEIDDYNTKDAAYGLETRDSLETMGMGDNGSEAD--HIADKIELTADENIMQHQSS 228
+ILA +D N + ++Y T+D+ T + D E+D H ++ D I+ + S
Sbjct: 61 DILA--LDFENQRASSYA--TKDTC-TSSVPDEDPESDDQHGGSDFDMHTDHLIIGGKDS 115
Query: 227 GVCDVIHDSLT-IPAQESATG--DDEEADVELSDLFSEDCITSGTLPPEVLKLQKKEKMA 57
C L IP+ E +DE ADVEL FSED + TL PE+L+LQKKEKM
Sbjct: 116 ESCSSKEFPLQPIPSVEPVQEKTEDEPADVELGGFFSEDALFGDTLAPEILELQKKEKMR 175
Query: 56 QQSNGLKLEKLDGIWKKG 3
+ + +EKLDGIWKKG
Sbjct: 176 ELCSDKNIEKLDGIWKKG 193
>ref|XP_006494370.1| PREDICTED: ATP-dependent RNA helicase DHX29-like isoform X1 [Citrus
sinensis]
Length = 1455
Score = 74.7 bits (182), Expect = 1e-11
Identities = 54/138 (39%), Positives = 75/138 (54%), Gaps = 5/138 (3%)
Frame = -3
Query: 401 EILASEIDDYNTKDAAYGLETRDSLETMGMGDNGSEAD--HIADKIELTADENIMQHQSS 228
+ILA +D N + ++Y T+D+ T + D E+D H ++ D I+ + S
Sbjct: 271 DILA--LDFENQRASSYA--TKDTC-TSSVPDEDPESDDQHGGSDFDMHTDHLIIGGKDS 325
Query: 227 GVCDVIHDSLT-IPAQESATG--DDEEADVELSDLFSEDCITSGTLPPEVLKLQKKEKMA 57
C L IP+ E +DE ADVEL FSED + TL PE+L+LQKKEKM
Sbjct: 326 ESCSSKEFPLQPIPSVEPVQEKTEDEPADVELGGFFSEDALFGDTLAPEILELQKKEKMR 385
Query: 56 QQSNGLKLEKLDGIWKKG 3
+ + +EKLDGIWKKG
Sbjct: 386 ELCSDKNIEKLDGIWKKG 403
>ref|XP_006431713.1| hypothetical protein CICLE_v100000301mg, partial [Citrus
clementina] gi|567878311|ref|XP_006431714.1|
hypothetical protein CICLE_v100000301mg, partial [Citrus
clementina] gi|557533835|gb|ESR44953.1| hypothetical
protein CICLE_v100000301mg, partial [Citrus clementina]
gi|557533836|gb|ESR44954.1| hypothetical protein
CICLE_v100000301mg, partial [Citrus clementina]
Length = 1101
Score = 74.7 bits (182), Expect = 1e-11
Identities = 54/138 (39%), Positives = 75/138 (54%), Gaps = 5/138 (3%)
Frame = -3
Query: 401 EILASEIDDYNTKDAAYGLETRDSLETMGMGDNGSEAD--HIADKIELTADENIMQHQSS 228
+ILA +D N + ++Y T+D+ T + D E+D H ++ D I+ + S
Sbjct: 271 DILA--LDFENQRASSYA--TKDTC-TSSVPDEDPESDDQHGGSDFDMHTDHLIIGGKDS 325
Query: 227 GVCDVIHDSLT-IPAQESATG--DDEEADVELSDLFSEDCITSGTLPPEVLKLQKKEKMA 57
C L IP+ E +DE ADVEL FSED + TL PE+L+LQKKEKM
Sbjct: 326 ESCSSKEFPLQPIPSVEPVQEKTEDEPADVELGGFFSEDALFGDTLAPEILELQKKEKMR 385
Query: 56 QQSNGLKLEKLDGIWKKG 3
+ + +EKLDGIWKKG
Sbjct: 386 ELCSDKNIEKLDGIWKKG 403
>ref|XP_006431712.1| hypothetical protein CICLE_v100000301mg [Citrus clementina]
gi|557533834|gb|ESR44952.1| hypothetical protein
CICLE_v100000301mg [Citrus clementina]
Length = 1103
Score = 74.7 bits (182), Expect = 1e-11
Identities = 54/138 (39%), Positives = 75/138 (54%), Gaps = 5/138 (3%)
Frame = -3
Query: 401 EILASEIDDYNTKDAAYGLETRDSLETMGMGDNGSEAD--HIADKIELTADENIMQHQSS 228
+ILA +D N + ++Y T+D+ T + D E+D H ++ D I+ + S
Sbjct: 271 DILA--LDFENQRASSYA--TKDTC-TSSVPDEDPESDDQHGGSDFDMHTDHLIIGGKDS 325
Query: 227 GVCDVIHDSLT-IPAQESATG--DDEEADVELSDLFSEDCITSGTLPPEVLKLQKKEKMA 57
C L IP+ E +DE ADVEL FSED + TL PE+L+LQKKEKM
Sbjct: 326 ESCSSKEFPLQPIPSVEPVQEKTEDEPADVELGGFFSEDALFGDTLAPEILELQKKEKMR 385
Query: 56 QQSNGLKLEKLDGIWKKG 3
+ + +EKLDGIWKKG
Sbjct: 386 ELCSDKNIEKLDGIWKKG 403
>ref|XP_006431711.1| hypothetical protein CICLE_v100000301mg [Citrus clementina]
gi|557533833|gb|ESR44951.1| hypothetical protein
CICLE_v100000301mg [Citrus clementina]
Length = 1096
Score = 74.7 bits (182), Expect = 1e-11
Identities = 54/138 (39%), Positives = 75/138 (54%), Gaps = 5/138 (3%)
Frame = -3
Query: 401 EILASEIDDYNTKDAAYGLETRDSLETMGMGDNGSEAD--HIADKIELTADENIMQHQSS 228
+ILA +D N + ++Y T+D+ T + D E+D H ++ D I+ + S
Sbjct: 271 DILA--LDFENQRASSYA--TKDTC-TSSVPDEDPESDDQHGGSDFDMHTDHLIIGGKDS 325
Query: 227 GVCDVIHDSLT-IPAQESATG--DDEEADVELSDLFSEDCITSGTLPPEVLKLQKKEKMA 57
C L IP+ E +DE ADVEL FSED + TL PE+L+LQKKEKM
Sbjct: 326 ESCSSKEFPLQPIPSVEPVQEKTEDEPADVELGGFFSEDALFGDTLAPEILELQKKEKMR 385
Query: 56 QQSNGLKLEKLDGIWKKG 3
+ + +EKLDGIWKKG
Sbjct: 386 ELCSDKNIEKLDGIWKKG 403
>ref|XP_002263889.1| PREDICTED: ATP-dependent RNA helicase DHX29 [Vitis vinifera]
gi|297739540|emb|CBI29722.3| unnamed protein product
[Vitis vinifera]
Length = 1458
Score = 73.6 bits (179), Expect = 3e-11
Identities = 43/98 (43%), Positives = 57/98 (58%)
Frame = -3
Query: 296 EADHIADKIELTADENIMQHQSSGVCDVIHDSLTIPAQESATGDDEEADVELSDLFSEDC 117
E + E T D +I + SS + S ++P +E ++ DVELS+ F ED
Sbjct: 307 EGGSVMHPSESTFDGSIKECFSSTELSMNSVSSSVPLEERIAAQEDSGDVELSNFF-EDA 365
Query: 116 ITSGTLPPEVLKLQKKEKMAQQSNGLKLEKLDGIWKKG 3
+S LP EVLKLQ KEKM + S+G LEKL+GIWKKG
Sbjct: 366 PSSEVLPHEVLKLQNKEKMKELSSGKNLEKLEGIWKKG 403
>gb|EXB29033.1| ATP-dependent RNA helicase DHX29 [Morus notabilis]
Length = 1411
Score = 72.8 bits (177), Expect = 5e-11
Identities = 54/143 (37%), Positives = 69/143 (48%), Gaps = 10/143 (6%)
Frame = -3
Query: 401 EILASEIDDYNTKDAAYGLETRDSLETMGMGDNGSEADHIAD----------KIELTADE 252
+IL SE ++ AA ++ M D SE D D E T+D
Sbjct: 265 DILESEFENEQAFYAA-----SEATNVTSMPDKQSEGDTFGDVERDSIFVLHAAESTSDG 319
Query: 251 NIMQHQSSGVCDVIHDSLTIPAQESATGDDEEADVELSDLFSEDCITSGTLPPEVLKLQK 72
N + +S V +PAQE+ G++E DVEL + FSED +L EV KLQK
Sbjct: 320 NETELCTSKDSPVKPTLTDVPAQETIVGEEESGDVELGNFFSEDGPLDESLSTEVYKLQK 379
Query: 71 KEKMAQQSNGLKLEKLDGIWKKG 3
KEKM + S LEKL GIWKKG
Sbjct: 380 KEKMKEMSE-KNLEKLGGIWKKG 401
>gb|EYU26490.1| hypothetical protein MIMGU_mgv1a000218mg [Mimulus guttatus]
Length = 1414
Score = 70.1 bits (170), Expect = 3e-10
Identities = 33/73 (45%), Positives = 45/73 (61%)
Frame = -3
Query: 221 CDVIHDSLTIPAQESATGDDEEADVELSDLFSEDCITSGTLPPEVLKLQKKEKMAQQSNG 42
C S+++PAQ + E DVEL D F E+ + LP EVL+LQK+EKM + +
Sbjct: 308 CSTDSASMSVPAQNEDASERESGDVELGDFFLEEDTSGSVLPSEVLELQKREKMKELCSE 367
Query: 41 LKLEKLDGIWKKG 3
LEK++GIWKKG
Sbjct: 368 KNLEKMEGIWKKG 380
>ref|XP_007225464.1| hypothetical protein PRUPE_ppa000230mg [Prunus persica]
gi|462422400|gb|EMJ26663.1| hypothetical protein
PRUPE_ppa000230mg [Prunus persica]
Length = 1426
Score = 67.8 bits (164), Expect = 1e-09
Identities = 39/89 (43%), Positives = 52/89 (58%)
Frame = -3
Query: 269 ELTADENIMQHQSSGVCDVIHDSLTIPAQESATGDDEEADVELSDLFSEDCITSGTLPPE 90
E+T D +H SS V + AQ ++E DVE+ + F ED + LPPE
Sbjct: 283 EITVDRIDEEHCSSIHFPVNSTLSSELAQGKIIAEEESIDVEIGNFFLEDGPSGEVLPPE 342
Query: 89 VLKLQKKEKMAQQSNGLKLEKLDGIWKKG 3
VL+LQK+E+M + S+ LEKLDGIWKKG
Sbjct: 343 VLELQKRERMREISSEKNLEKLDGIWKKG 371
>ref|XP_007041296.1| ATP-dependent RNA helicase, putative isoform 3 [Theobroma cacao]
gi|508705231|gb|EOX97127.1| ATP-dependent RNA helicase,
putative isoform 3 [Theobroma cacao]
Length = 1305
Score = 66.2 bits (160), Expect = 4e-09
Identities = 47/109 (43%), Positives = 59/109 (54%), Gaps = 1/109 (0%)
Frame = -3
Query: 326 ETMGMGDNGSE-ADHIADKIELTADENIMQHQSSGVCDVIHDSLTIPAQESATGDDEEAD 150
E + +GD G + A + E T D N +SS +PAQE + + E D
Sbjct: 300 EVISLGDEGGDSAASVMFFGEATDDVN--DTESSEEFSTKSIPSLLPAQEVVSENMSE-D 356
Query: 149 VELSDLFSEDCITSGTLPPEVLKLQKKEKMAQQSNGLKLEKLDGIWKKG 3
VE+ D F ED T+ L EVLKLQKKEKM + + LEKLDGIWKKG
Sbjct: 357 VEIGDFFLEDDSTNDALLSEVLKLQKKEKMKELYSEKNLEKLDGIWKKG 405
>ref|XP_007041294.1| ATP-dependent RNA helicase, putative isoform 1 [Theobroma cacao]
gi|590682240|ref|XP_007041295.1| ATP-dependent RNA
helicase, putative isoform 1 [Theobroma cacao]
gi|508705229|gb|EOX97125.1| ATP-dependent RNA helicase,
putative isoform 1 [Theobroma cacao]
gi|508705230|gb|EOX97126.1| ATP-dependent RNA helicase,
putative isoform 1 [Theobroma cacao]
Length = 1457
Score = 66.2 bits (160), Expect = 4e-09
Identities = 47/109 (43%), Positives = 59/109 (54%), Gaps = 1/109 (0%)
Frame = -3
Query: 326 ETMGMGDNGSE-ADHIADKIELTADENIMQHQSSGVCDVIHDSLTIPAQESATGDDEEAD 150
E + +GD G + A + E T D N +SS +PAQE + + E D
Sbjct: 300 EVISLGDEGGDSAASVMFFGEATDDVN--DTESSEEFSTKSIPSLLPAQEVVSENMSE-D 356
Query: 149 VELSDLFSEDCITSGTLPPEVLKLQKKEKMAQQSNGLKLEKLDGIWKKG 3
VE+ D F ED T+ L EVLKLQKKEKM + + LEKLDGIWKKG
Sbjct: 357 VEIGDFFLEDDSTNDALLSEVLKLQKKEKMKELYSEKNLEKLDGIWKKG 405
>ref|XP_006385022.1| hypothetical protein POPTR_0004s231602g, partial [Populus
trichocarpa] gi|550341790|gb|ERP62819.1| hypothetical
protein POPTR_0004s231602g, partial [Populus
trichocarpa]
Length = 397
Score = 62.8 bits (151), Expect = 5e-08
Identities = 33/89 (37%), Positives = 52/89 (58%)
Frame = -3
Query: 272 IELTADENIMQHQSSGVCDVIHDSLTIPAQESATGDDEEADVELSDLFSEDCITSGTLPP 93
+E DEN ++ SS + ++P + ++ E DVE+ D F +D ++ LPP
Sbjct: 310 VESIVDENDLESSSSIGFPLNPVPSSVPLEGEIVSEESE-DVEIGDFFIDDASSNDALPP 368
Query: 92 EVLKLQKKEKMAQQSNGLKLEKLDGIWKK 6
+L+LQK+EKM + + LEKL+GIWKK
Sbjct: 369 GILELQKREKMRELCSEKNLEKLEGIWKK 397
>ref|XP_004146280.1| PREDICTED: ATP-dependent RNA helicase Dhx29-like [Cucumis sativus]
Length = 1642
Score = 62.4 bits (150), Expect = 6e-08
Identities = 30/67 (44%), Positives = 43/67 (64%)
Frame = -3
Query: 203 SLTIPAQESATGDDEEADVELSDLFSEDCITSGTLPPEVLKLQKKEKMAQQSNGLKLEKL 24
S+ + + + +E DVE+ + F ED T+ + E+LKL+KKEKM + S+G EKL
Sbjct: 366 SVDLLSSQGKNDSEEPEDVEIGNFFLEDVETNSDVAQELLKLKKKEKMKELSSGKNSEKL 425
Query: 23 DGIWKKG 3
DGIWKKG
Sbjct: 426 DGIWKKG 432
>ref|XP_004159882.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein
LOC101226815 [Cucumis sativus]
Length = 844
Score = 61.6 bits (148), Expect = 1e-07
Identities = 30/67 (44%), Positives = 42/67 (62%)
Frame = -3
Query: 203 SLTIPAQESATGDDEEADVELSDLFSEDCITSGTLPPEVLKLQKKEKMAQQSNGLKLEKL 24
S+ + + + +E DVE+ F ED T+ + E+LKL+KKEKM + S+G EKL
Sbjct: 366 SVDLLSSQGKNDSEEPEDVEIGXFFLEDVETNSDVAQELLKLKKKEKMKELSSGKNSEKL 425
Query: 23 DGIWKKG 3
DGIWKKG
Sbjct: 426 DGIWKKG 432
>ref|XP_006600261.1| PREDICTED: ATP-dependent RNA helicase Dhx29-like isoform X3
[Glycine max]
Length = 1435
Score = 58.9 bits (141), Expect = 7e-07
Identities = 30/60 (50%), Positives = 39/60 (65%)
Frame = -3
Query: 182 ESATGDDEEADVELSDLFSEDCITSGTLPPEVLKLQKKEKMAQQSNGLKLEKLDGIWKKG 3
E + E D+EL LF ED S LPP++LK+QK+EK+ + S L+KLDGIWKKG
Sbjct: 324 EKDSAQGEVGDIELGGLFLEDASPSEILPPDILKVQKQEKIRRLSE-KNLDKLDGIWKKG 382
>ref|XP_006600260.1| PREDICTED: ATP-dependent RNA helicase Dhx29-like isoform X2
[Glycine max]
Length = 1437
Score = 58.9 bits (141), Expect = 7e-07
Identities = 30/60 (50%), Positives = 39/60 (65%)
Frame = -3
Query: 182 ESATGDDEEADVELSDLFSEDCITSGTLPPEVLKLQKKEKMAQQSNGLKLEKLDGIWKKG 3
E + E D+EL LF ED S LPP++LK+QK+EK+ + S L+KLDGIWKKG
Sbjct: 324 EKDSAQGEVGDIELGGLFLEDASPSEILPPDILKVQKQEKIRRLSE-KNLDKLDGIWKKG 382
>ref|XP_006600259.1| PREDICTED: ATP-dependent RNA helicase Dhx29-like isoform X1
[Glycine max]
Length = 1438
Score = 58.9 bits (141), Expect = 7e-07
Identities = 30/60 (50%), Positives = 39/60 (65%)
Frame = -3
Query: 182 ESATGDDEEADVELSDLFSEDCITSGTLPPEVLKLQKKEKMAQQSNGLKLEKLDGIWKKG 3
E + E D+EL LF ED S LPP++LK+QK+EK+ + S L+KLDGIWKKG
Sbjct: 324 EKDSAQGEVGDIELGGLFLEDASPSEILPPDILKVQKQEKIRRLSE-KNLDKLDGIWKKG 382
>gb|AAG50701.1|AC079604_8 hypothetical protein [Arabidopsis thaliana]
Length = 1453
Score = 57.8 bits (138), Expect = 2e-06
Identities = 29/61 (47%), Positives = 38/61 (62%)
Frame = -3
Query: 185 QESATGDDEEADVELSDLFSEDCITSGTLPPEVLKLQKKEKMAQQSNGLKLEKLDGIWKK 6
Q+ D++ DVEL D F E+ S P E+L+LQK+EKM + + L KLDGIWKK
Sbjct: 345 QDFVASDEDSEDVELGDTFFEEIPPSEISPHELLELQKEEKMRELRSEKNLGKLDGIWKK 404
Query: 5 G 3
G
Sbjct: 405 G 405