BLASTX nr result
ID: Cocculus22_contig00020735
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus22_contig00020735
(288 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AEJ72569.1| putative reverse transcriptase family member [Mal... 64 7e-14
emb|CCH50976.1| T4.15 [Malus x robusta] 58 2e-11
gb|EMT08767.1| Brefeldin A-inhibited guanine nucleotide-exchange... 60 3e-11
gb|EXB39515.1| Solanesyl diphosphate synthase 3 [Morus notabilis] 57 1e-10
gb|ABN08144.1| RNA-directed DNA polymerase ; HMG-I and HMG-Y, DN... 58 1e-10
gb|EXB60461.1| hypothetical protein L484_014914 [Morus notabilis] 55 2e-10
gb|EMS56299.1| Polycomb group protein EMBRYONIC FLOWER 2 [Tritic... 56 3e-10
ref|XP_003581610.1| PREDICTED: uncharacterized protein LOC100840... 55 3e-10
ref|XP_003571941.1| PREDICTED: RNA-directed DNA polymerase from ... 55 3e-10
ref|NP_001183823.1| uncharacterized protein LOC100502416 [Zea ma... 55 3e-10
gb|EMS62958.1| Putative SWI/SNF-related matrix-associated actin-... 56 4e-10
gb|EMS49379.1| Retrovirus-related Pol polyprotein LINE-1 [Tritic... 56 4e-10
gb|EMS57239.1| hypothetical protein TRIUR3_19949 [Triticum urartu] 56 4e-10
gb|ABB00038.1| reverse transcriptase family member [Glycine max] 55 4e-10
gb|EMS50104.1| Retrovirus-related Pol polyprotein LINE-1 [Tritic... 55 5e-10
gb|AEL30371.1| TIR-NBS-LRR type disease resistance protein [Arac... 54 5e-10
gb|ABD28426.2| RNA-directed DNA polymerase (Reverse transcriptas... 55 7e-10
gb|EMT12215.1| Protein STRUBBELIG-RECEPTOR FAMILY 1 [Aegilops ta... 55 9e-10
gb|EMT05937.1| GPI ethanolamine phosphate transferase 1 [Aegilop... 56 1e-09
gb|EMS60091.1| Retinoblastoma-related protein 1 [Triticum urartu] 56 1e-09
>gb|AEJ72569.1| putative reverse transcriptase family member [Malus domestica]
Length = 212
Score = 64.3 bits (155), Expect(2) = 7e-14
Identities = 29/39 (74%), Positives = 32/39 (82%)
Frame = +2
Query: 170 LLYDTCIPLKLKRKFYRTTIRLAMLYGIECWATKKQHVN 286
+L D C+PLKLK KFYRTTIR AMLYG ECWA K QHV+
Sbjct: 57 VLCDRCMPLKLKGKFYRTTIRPAMLYGTECWAVKYQHVH 95
Score = 38.1 bits (87), Expect(2) = 7e-14
Identities = 19/35 (54%), Positives = 23/35 (65%)
Frame = +3
Query: 63 SIRLAMLYGFE*KGEIGNDVTCRIKAGWVKWKSAS 167
SIR LY GE+ D+ RI+AGW+KWKSAS
Sbjct: 21 SIRNPNLYPKLKNGELDGDLNHRIQAGWMKWKSAS 55
>emb|CCH50976.1| T4.15 [Malus x robusta]
Length = 986
Score = 58.2 bits (139), Expect(2) = 2e-11
Identities = 27/39 (69%), Positives = 30/39 (76%)
Frame = +2
Query: 170 LLYDTCIPLKLKRKFYRTTIRLAMLYGIECWATKKQHVN 286
+L D +PLKLK KFYRT IR AMLYG ECWA K QHV+
Sbjct: 831 VLCDRRMPLKLKGKFYRTAIRPAMLYGTECWAVKHQHVH 869
Score = 35.8 bits (81), Expect(2) = 2e-11
Identities = 14/22 (63%), Positives = 18/22 (81%)
Frame = +3
Query: 102 GEIGNDVTCRIKAGWVKWKSAS 167
GE+ D+ RI+AGW+KWKSAS
Sbjct: 808 GELDGDLNHRIQAGWMKWKSAS 829
>gb|EMT08767.1| Brefeldin A-inhibited guanine nucleotide-exchange protein 2 [Aegilops
tauschii]
Length = 1071
Score = 59.7 bits (143), Expect(2) = 3e-11
Identities = 25/38 (65%), Positives = 31/38 (81%)
Frame = +2
Query: 170 LLYDTCIPLKLKRKFYRTTIRLAMLYGIECWATKKQHV 283
+LYD +P KLK KFYRTT+R AMLYG+ECW TK++ V
Sbjct: 951 ILYDKRVPQKLKGKFYRTTVRPAMLYGVECWPTKRRQV 988
Score = 33.9 bits (76), Expect(2) = 3e-11
Identities = 14/22 (63%), Positives = 16/22 (72%)
Frame = +3
Query: 102 GEIGNDVTCRIKAGWVKWKSAS 167
G I DV RIKAGW+KW+ AS
Sbjct: 928 GGIDEDVNHRIKAGWMKWRQAS 949
>gb|EXB39515.1| Solanesyl diphosphate synthase 3 [Morus notabilis]
Length = 670
Score = 57.0 bits (136), Expect(2) = 1e-10
Identities = 25/38 (65%), Positives = 30/38 (78%)
Frame = +2
Query: 170 LLYDTCIPLKLKRKFYRTTIRLAMLYGIECWATKKQHV 283
+L D +P+KLK KFYRT IR AMLYG ECWA K+QH+
Sbjct: 507 VLCDVEMPIKLKGKFYRTVIRPAMLYGSECWAIKRQHI 544
Score = 34.7 bits (78), Expect(2) = 1e-10
Identities = 13/23 (56%), Positives = 18/23 (78%)
Frame = +3
Query: 99 KGEIGNDVTCRIKAGWVKWKSAS 167
+G+I D+ RIKAGWVKWK+ +
Sbjct: 483 EGDIEEDIEHRIKAGWVKWKNVT 505
>gb|ABN08144.1| RNA-directed DNA polymerase ; HMG-I and HMG-Y, DNA-binding,
putative [Medicago truncatula]
Length = 195
Score = 57.8 bits (138), Expect(2) = 1e-10
Identities = 26/39 (66%), Positives = 29/39 (74%)
Frame = +2
Query: 170 LLYDTCIPLKLKRKFYRTTIRLAMLYGIECWATKKQHVN 286
+L D +PLKLK KFYRT IR A+LYG ECWA K QH N
Sbjct: 115 VLCDKKVPLKLKGKFYRTAIRPALLYGTECWAVKSQHEN 153
Score = 33.9 bits (76), Expect(2) = 1e-10
Identities = 14/22 (63%), Positives = 18/22 (81%)
Frame = +3
Query: 102 GEIGNDVTCRIKAGWVKWKSAS 167
GEI DV+ RI+AGW+KW+ AS
Sbjct: 92 GEIEADVSHRIQAGWLKWRRAS 113
>gb|EXB60461.1| hypothetical protein L484_014914 [Morus notabilis]
Length = 714
Score = 55.1 bits (131), Expect(2) = 2e-10
Identities = 24/39 (61%), Positives = 31/39 (79%)
Frame = +2
Query: 170 LLYDTCIPLKLKRKFYRTTIRLAMLYGIECWATKKQHVN 286
+L D+ +P+KLK KFYRT I AMLYG ECWA K+QH++
Sbjct: 455 VLCDSKMPIKLKGKFYRTVICPAMLYGSECWAIKRQHIS 493
Score = 35.8 bits (81), Expect(2) = 2e-10
Identities = 14/22 (63%), Positives = 18/22 (81%)
Frame = +3
Query: 99 KGEIGNDVTCRIKAGWVKWKSA 164
+G+I D+ RIKAGWVKWK+A
Sbjct: 431 EGDIEEDIQHRIKAGWVKWKNA 452
>gb|EMS56299.1| Polycomb group protein EMBRYONIC FLOWER 2 [Triticum urartu]
Length = 974
Score = 55.8 bits (133), Expect(2) = 3e-10
Identities = 24/38 (63%), Positives = 29/38 (76%)
Frame = +2
Query: 170 LLYDTCIPLKLKRKFYRTTIRLAMLYGIECWATKKQHV 283
+L D +P KLK KFYRT +R AMLYG ECW TK++HV
Sbjct: 234 ILCDKRVPQKLKGKFYRTAVRPAMLYGAECWPTKRRHV 271
Score = 34.3 bits (77), Expect(2) = 3e-10
Identities = 13/23 (56%), Positives = 17/23 (73%)
Frame = +3
Query: 102 GEIGNDVTCRIKAGWVKWKSASI 170
G + DV RIKAGW+KW+ AS+
Sbjct: 211 GGVDEDVDHRIKAGWMKWRQASV 233
>ref|XP_003581610.1| PREDICTED: uncharacterized protein LOC100840703 [Brachypodium
distachyon]
Length = 567
Score = 54.7 bits (130), Expect(2) = 3e-10
Identities = 24/38 (63%), Positives = 29/38 (76%)
Frame = +2
Query: 170 LLYDTCIPLKLKRKFYRTTIRLAMLYGIECWATKKQHV 283
+L D +P KLK KFYRT IR A+LYG ECW TK++HV
Sbjct: 414 ILCDKRVPQKLKGKFYRTAIRPAILYGAECWPTKRRHV 451
Score = 35.4 bits (80), Expect(2) = 3e-10
Identities = 14/22 (63%), Positives = 17/22 (77%)
Frame = +3
Query: 102 GEIGNDVTCRIKAGWVKWKSAS 167
G+I DV RIKAGW+KW+ AS
Sbjct: 391 GDIDEDVNHRIKAGWMKWRQAS 412
>ref|XP_003571941.1| PREDICTED: RNA-directed DNA polymerase from mobile element
jockey-like [Brachypodium distachyon]
Length = 307
Score = 54.7 bits (130), Expect(2) = 3e-10
Identities = 24/38 (63%), Positives = 29/38 (76%)
Frame = +2
Query: 170 LLYDTCIPLKLKRKFYRTTIRLAMLYGIECWATKKQHV 283
+L D +P KLK KFYRT IR A+LYG ECW TK++HV
Sbjct: 154 ILCDKRVPQKLKGKFYRTAIRPAILYGAECWPTKRRHV 191
Score = 35.4 bits (80), Expect(2) = 3e-10
Identities = 14/22 (63%), Positives = 17/22 (77%)
Frame = +3
Query: 102 GEIGNDVTCRIKAGWVKWKSAS 167
G+I DV RIKAGW+KW+ AS
Sbjct: 131 GDIDEDVNHRIKAGWMKWRQAS 152
>ref|NP_001183823.1| uncharacterized protein LOC100502416 [Zea mays]
gi|238014750|gb|ACR38410.1| unknown [Zea mays]
Length = 215
Score = 55.5 bits (132), Expect(2) = 3e-10
Identities = 25/38 (65%), Positives = 29/38 (76%)
Frame = +2
Query: 170 LLYDTCIPLKLKRKFYRTTIRLAMLYGIECWATKKQHV 283
+L D +P KLK KFYRT IR AMLYG ECW TK++HV
Sbjct: 62 VLCDPRVPHKLKGKFYRTAIRPAMLYGAECWPTKRRHV 99
Score = 34.7 bits (78), Expect(2) = 3e-10
Identities = 13/22 (59%), Positives = 18/22 (81%)
Frame = +3
Query: 102 GEIGNDVTCRIKAGWVKWKSAS 167
G+I DV+ RIKAGW+KW+ A+
Sbjct: 39 GDIDEDVSHRIKAGWLKWRQAA 60
>gb|EMS62958.1| Putative SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily A member 3-like 1
[Triticum urartu]
Length = 1028
Score = 55.8 bits (133), Expect(2) = 4e-10
Identities = 24/38 (63%), Positives = 29/38 (76%)
Frame = +2
Query: 170 LLYDTCIPLKLKRKFYRTTIRLAMLYGIECWATKKQHV 283
+L D +P KLK KFYRT +R AMLYG ECW TK++HV
Sbjct: 614 ILCDKRVPQKLKGKFYRTAVRPAMLYGAECWPTKRRHV 651
Score = 33.9 bits (76), Expect(2) = 4e-10
Identities = 14/22 (63%), Positives = 16/22 (72%)
Frame = +3
Query: 102 GEIGNDVTCRIKAGWVKWKSAS 167
G I DV RIKAGW+KW+ AS
Sbjct: 591 GGIDEDVNHRIKAGWMKWRQAS 612
>gb|EMS49379.1| Retrovirus-related Pol polyprotein LINE-1 [Triticum urartu]
Length = 882
Score = 55.8 bits (133), Expect(2) = 4e-10
Identities = 24/38 (63%), Positives = 29/38 (76%)
Frame = +2
Query: 170 LLYDTCIPLKLKRKFYRTTIRLAMLYGIECWATKKQHV 283
+L D +P KLK KFYRT +R AMLYG ECW TK++HV
Sbjct: 362 ILCDKRVPQKLKGKFYRTVVRPAMLYGAECWPTKRRHV 399
Score = 33.9 bits (76), Expect(2) = 4e-10
Identities = 14/22 (63%), Positives = 16/22 (72%)
Frame = +3
Query: 102 GEIGNDVTCRIKAGWVKWKSAS 167
G I DV RIKAGW+KW+ AS
Sbjct: 339 GGIDEDVNHRIKAGWMKWRQAS 360
>gb|EMS57239.1| hypothetical protein TRIUR3_19949 [Triticum urartu]
Length = 505
Score = 55.8 bits (133), Expect(2) = 4e-10
Identities = 24/38 (63%), Positives = 29/38 (76%)
Frame = +2
Query: 170 LLYDTCIPLKLKRKFYRTTIRLAMLYGIECWATKKQHV 283
+L D +P KLK KFYRT +R AMLYG ECW TK++HV
Sbjct: 128 ILCDKRVPQKLKGKFYRTAVRPAMLYGAECWPTKRRHV 165
Score = 33.9 bits (76), Expect(2) = 4e-10
Identities = 14/22 (63%), Positives = 16/22 (72%)
Frame = +3
Query: 102 GEIGNDVTCRIKAGWVKWKSAS 167
G I DV RIKAGW+KW+ AS
Sbjct: 105 GGIDEDVNHRIKAGWMKWRQAS 126
>gb|ABB00038.1| reverse transcriptase family member [Glycine max]
Length = 377
Score = 55.1 bits (131), Expect(2) = 4e-10
Identities = 23/39 (58%), Positives = 28/39 (71%)
Frame = +2
Query: 170 LLYDTCIPLKLKRKFYRTTIRLAMLYGIECWATKKQHVN 286
+L D +P+KLK KFYRT +R +LYG ECWA K QH N
Sbjct: 223 VLCDAKVPIKLKGKFYRTAVRPTILYGTECWAVKSQHEN 261
Score = 34.7 bits (78), Expect(2) = 4e-10
Identities = 14/22 (63%), Positives = 17/22 (77%)
Frame = +3
Query: 102 GEIGNDVTCRIKAGWVKWKSAS 167
GEI DV RI+AGW+KW+ AS
Sbjct: 200 GEIEGDVNHRIQAGWMKWRKAS 221
>gb|EMS50104.1| Retrovirus-related Pol polyprotein LINE-1 [Triticum urartu]
Length = 3154
Score = 55.5 bits (132), Expect(2) = 5e-10
Identities = 23/38 (60%), Positives = 29/38 (76%)
Frame = +2
Query: 170 LLYDTCIPLKLKRKFYRTTIRLAMLYGIECWATKKQHV 283
+L D +P KL KFYRT +R AMLYG+ECW TK++HV
Sbjct: 2328 ILCDKKVPQKLNGKFYRTAVRPAMLYGVECWPTKRRHV 2365
Score = 33.9 bits (76), Expect(2) = 5e-10
Identities = 14/22 (63%), Positives = 16/22 (72%)
Frame = +3
Query: 102 GEIGNDVTCRIKAGWVKWKSAS 167
G I DV RIKAGW+KW+ AS
Sbjct: 2305 GGIDEDVNHRIKAGWMKWRQAS 2326
>gb|AEL30371.1| TIR-NBS-LRR type disease resistance protein [Arachis hypogaea]
Length = 1939
Score = 54.3 bits (129), Expect(2) = 5e-10
Identities = 24/34 (70%), Positives = 26/34 (76%)
Frame = +2
Query: 179 DTCIPLKLKRKFYRTTIRLAMLYGIECWATKKQH 280
D +PLKLK KFYRT IR AMLYG ECWA K +H
Sbjct: 1250 DKKVPLKLKGKFYRTAIRPAMLYGTECWAAKGEH 1283
Score = 35.0 bits (79), Expect(2) = 5e-10
Identities = 15/22 (68%), Positives = 17/22 (77%)
Frame = +3
Query: 102 GEIGNDVTCRIKAGWVKWKSAS 167
GEI DV RI+AGW KW+SAS
Sbjct: 1224 GEIEQDVNHRIQAGWSKWRSAS 1245
>gb|ABD28426.2| RNA-directed DNA polymerase (Reverse transcriptase) [Medicago
truncatula]
Length = 517
Score = 55.1 bits (131), Expect(2) = 7e-10
Identities = 24/39 (61%), Positives = 28/39 (71%)
Frame = +2
Query: 170 LLYDTCIPLKLKRKFYRTTIRLAMLYGIECWATKKQHVN 286
+L D +PLKL KFYRT +R A+LYG ECWA K QH N
Sbjct: 477 VLCDKKVPLKLTGKFYRTAVRPALLYGTECWAVKSQHEN 515
Score = 33.9 bits (76), Expect(2) = 7e-10
Identities = 14/22 (63%), Positives = 18/22 (81%)
Frame = +3
Query: 102 GEIGNDVTCRIKAGWVKWKSAS 167
GEI DV+ RI+AGW+KW+ AS
Sbjct: 454 GEIEADVSHRIQAGWLKWRRAS 475
>gb|EMT12215.1| Protein STRUBBELIG-RECEPTOR FAMILY 1 [Aegilops tauschii]
Length = 840
Score = 54.7 bits (130), Expect(2) = 9e-10
Identities = 24/38 (63%), Positives = 28/38 (73%)
Frame = +2
Query: 170 LLYDTCIPLKLKRKFYRTTIRLAMLYGIECWATKKQHV 283
+L D +P KLK KFYRT +R AMLYG ECW TK +HV
Sbjct: 606 ILCDKRVPQKLKGKFYRTAVRPAMLYGAECWPTKTRHV 643
Score = 33.9 bits (76), Expect(2) = 9e-10
Identities = 14/22 (63%), Positives = 16/22 (72%)
Frame = +3
Query: 102 GEIGNDVTCRIKAGWVKWKSAS 167
G I DV RIKAGW+KW+ AS
Sbjct: 583 GGIDEDVNHRIKAGWMKWRQAS 604
>gb|EMT05937.1| GPI ethanolamine phosphate transferase 1 [Aegilops tauschii]
Length = 1013
Score = 55.8 bits (133), Expect(2) = 1e-09
Identities = 24/38 (63%), Positives = 29/38 (76%)
Frame = +2
Query: 170 LLYDTCIPLKLKRKFYRTTIRLAMLYGIECWATKKQHV 283
+L D +P KLK KFYRT +R AMLYG ECW TK++HV
Sbjct: 145 ILCDKRVPQKLKGKFYRTAVRPAMLYGAECWPTKRRHV 182
Score = 32.3 bits (72), Expect(2) = 1e-09
Identities = 13/20 (65%), Positives = 15/20 (75%)
Frame = +3
Query: 108 IGNDVTCRIKAGWVKWKSAS 167
I DV RIKAGW+KW+ AS
Sbjct: 124 IDEDVNHRIKAGWMKWRQAS 143
>gb|EMS60091.1| Retinoblastoma-related protein 1 [Triticum urartu]
Length = 747
Score = 55.8 bits (133), Expect(2) = 1e-09
Identities = 24/42 (57%), Positives = 30/42 (71%)
Frame = +2
Query: 158 ECIDLLYDTCIPLKLKRKFYRTTIRLAMLYGIECWATKKQHV 283
+ +L D +P KLK KFYR T+R AMLYG ECW TK++HV
Sbjct: 176 QAFGILCDKRVPQKLKGKFYRMTVRPAMLYGAECWLTKRRHV 217
Score = 32.3 bits (72), Expect(2) = 1e-09
Identities = 13/21 (61%), Positives = 15/21 (71%)
Frame = +3
Query: 102 GEIGNDVTCRIKAGWVKWKSA 164
G I DV RIKAGW+KW+ A
Sbjct: 157 GGIDEDVNHRIKAGWMKWRQA 177