BLASTX nr result

ID: Cocculus22_contig00020650 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus22_contig00020650
         (832 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_006291803.1| orf34 gene product (mitochondrion) [Daucus c...   138   3e-36
gb|AGC78970.1| hypothetical protein (mitochondrion) [Vicia faba]...   135   6e-32
ref|XP_003588286.1| hypothetical protein MTR_1g005270 [Medicago ...   139   1e-30
ref|XP_003591561.1| hypothetical protein MTR_1g088810 [Medicago ...   112   1e-27
ref|XP_002539514.1| conserved hypothetical protein [Ricinus comm...    89   2e-15
gb|EXC33548.1| putative mitochondrial protein [Morus notabilis]        87   1e-14

>ref|YP_006291803.1| orf34 gene product (mitochondrion) [Daucus carota subsp. sativus]
           gi|374081980|gb|AEY81172.1| orf34 (mitochondrion)
           [Daucus carota subsp. sativus]
          Length = 148

 Score =  138 bits (348), Expect(2) = 3e-36
 Identities = 65/73 (89%), Positives = 67/73 (91%)
 Frame = -1

Query: 679 TGVLSSNDACGLSHSHPKWWPDSAWPGREEIHIETTAIRE*ISMLASGGGLSYGSPAAAS 500
           TGVLSSNDACGLSHSHPK WPDSAWPGREE HIETT +RE +SMLA GGGLSYGSPAA S
Sbjct: 67  TGVLSSNDACGLSHSHPKRWPDSAWPGREESHIETTTLRESLSMLACGGGLSYGSPAATS 126

Query: 499 DRPSRLILIWLYL 461
           DRPSRLILIWLYL
Sbjct: 127 DRPSRLILIWLYL 139



 Score = 40.8 bits (94), Expect(2) = 3e-36
 Identities = 23/45 (51%), Positives = 27/45 (60%), Gaps = 6/45 (13%)
 Frame = -2

Query: 792 GGVLERTTHVLCCPNPRKGIW*GAT------VRWLTSHFEEATGL 676
           GG+LERTTH  CC  P +G   G          WLT+HFEEATG+
Sbjct: 27  GGLLERTTH--CCVAPTQGRALGEEHCFEVGKAWLTNHFEEATGV 69


>gb|AGC78970.1| hypothetical protein (mitochondrion) [Vicia faba]
           gi|442803262|gb|AGC78997.1| hypothetical protein
           (mitochondrion) [Vicia faba]
          Length = 111

 Score =  135 bits (341), Expect(2) = 6e-32
 Identities = 65/73 (89%), Positives = 67/73 (91%)
 Frame = -1

Query: 679 TGVLSSNDACGLSHSHPKWWPDSAWPGREEIHIETTAIRE*ISMLASGGGLSYGSPAAAS 500
           TGVLSSNDA GLSHSHPKWWPDSAWPGREEIHI+T AIRE +SMLASGG LSY SPAAAS
Sbjct: 30  TGVLSSNDAYGLSHSHPKWWPDSAWPGREEIHIDTFAIRESLSMLASGGRLSYDSPAAAS 89

Query: 499 DRPSRLILIWLYL 461
           DRP RLILIWLYL
Sbjct: 90  DRPLRLILIWLYL 102



 Score = 29.3 bits (64), Expect(2) = 6e-32
 Identities = 11/12 (91%), Positives = 12/12 (100%)
 Frame = -2

Query: 711 WLTSHFEEATGL 676
           WLTSHFEEATG+
Sbjct: 21  WLTSHFEEATGV 32


>ref|XP_003588286.1| hypothetical protein MTR_1g005270 [Medicago truncatula]
           gi|355477334|gb|AES58537.1| hypothetical protein
           MTR_1g005270 [Medicago truncatula]
          Length = 126

 Score =  139 bits (350), Expect = 1e-30
 Identities = 79/107 (73%), Positives = 82/107 (76%)
 Frame = -2

Query: 429 FFAFRKRHSSVSSAPFPIQLCRPLREWVIGPVQAARLSSSILAATHDPIGTIRFLRPSLD 250
           FF   K H S  + P       P++   IGPVQAARL SSI AATHDPIGTI    P LD
Sbjct: 5   FFLRLKTHQS--ARPLSYSALPPIKR--IGPVQAARLYSSIPAATHDPIGTIC---PYLD 57

Query: 249 KKQNAPSPTALSSAGDFHEMKTGGIVVCSTLVALVYIPEYSYGRSVT 109
           KKQNAPSPTALSSAGDFHEMKTGGIVVCSTLVALVYIPEYSYGRSVT
Sbjct: 58  KKQNAPSPTALSSAGDFHEMKTGGIVVCSTLVALVYIPEYSYGRSVT 104


>ref|XP_003591561.1| hypothetical protein MTR_1g088810 [Medicago truncatula]
           gi|355480609|gb|AES61812.1| hypothetical protein
           MTR_1g088810 [Medicago truncatula]
          Length = 444

 Score =  112 bits (279), Expect(2) = 1e-27
 Identities = 57/62 (91%), Positives = 57/62 (91%)
 Frame = -2

Query: 294 HDPIGTIRFLRPSLDKKQNAPSPTALSSAGDFHEMKTGGIVVCSTLVALVYIPEYSYGRS 115
           HDPIGTI    P LDKKQNAPSPTALSSAGDFHEMKTGGIVVCSTLVALVYIPEYSYGRS
Sbjct: 83  HDPIGTIC---PYLDKKQNAPSPTALSSAGDFHEMKTGGIVVCSTLVALVYIPEYSYGRS 139

Query: 114 VT 109
           VT
Sbjct: 140 VT 141



 Score = 38.5 bits (88), Expect(2) = 1e-27
 Identities = 16/21 (76%), Positives = 16/21 (76%)
 Frame = -1

Query: 349 GNRSRSSGPPFFIYTSCHARP 287
           G  SRSSGPP FIYTSCH  P
Sbjct: 65  GRSSRSSGPPLFIYTSCHHDP 85


>ref|XP_002539514.1| conserved hypothetical protein [Ricinus communis]
           gi|223505440|gb|EEF22868.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 124

 Score = 89.0 bits (219), Expect = 2e-15
 Identities = 48/69 (69%), Positives = 49/69 (71%), Gaps = 4/69 (5%)
 Frame = +1

Query: 604 ARPNRATTWDGNGSAHMHHLMKALQSSRLLEVACQPPDRSSSPNAL----PWVGATQHMS 771
           ARPNRATTWDGNGSAHMHHLMKALQSSRLLEVACQP   S     L     W      MS
Sbjct: 1   ARPNRATTWDGNGSAHMHHLMKALQSSRLLEVACQPRFPSLKIMLLTKCPSWGWGNTAMS 60

Query: 772 SSLQDPTPA 798
           SSLQD TP+
Sbjct: 61  SSLQDSTPS 69


>gb|EXC33548.1| putative mitochondrial protein [Morus notabilis]
          Length = 478

 Score = 86.7 bits (213), Expect = 1e-14
 Identities = 46/70 (65%), Positives = 47/70 (67%), Gaps = 3/70 (4%)
 Frame = +3

Query: 597 RPGQAESGHHLGWEWLSPHASFDESTPVQSPPRSGLSTTGP*LLTKCP---SLGWGNTAH 767
           R  QAESGH LGWEW +PHASFDESTPVQSPPRSGLSTT     T  P   SLGWG TA 
Sbjct: 230 RARQAESGHPLGWEWPNPHASFDESTPVQSPPRSGLSTTLSLSQTNAPHQISLGWGKTAM 289

Query: 768 E*FAPGPHPS 797
                 P PS
Sbjct: 290 SSSLQDPTPS 299


Top