BLASTX nr result

ID: Cocculus22_contig00020649 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus22_contig00020649
         (591 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_849631.1| ankyrin repeat-containing protein [Arabidopsis ...    56   6e-06
ref|NP_563867.1| ankyrin repeat-containing protein [Arabidopsis ...    56   6e-06
ref|XP_006303592.1| hypothetical protein CARUB_v10011143mg [Caps...    56   8e-06

>ref|NP_849631.1| ankyrin repeat-containing protein [Arabidopsis thaliana]
           gi|332190447|gb|AEE28568.1| ankyrin repeat-containing
           protein [Arabidopsis thaliana]
          Length = 574

 Score = 56.2 bits (134), Expect = 6e-06
 Identities = 31/76 (40%), Positives = 39/76 (51%)
 Frame = -2

Query: 590 TTAFKVFTLCNDVALLLSLGAVAIFMSFFTFSWRGLDFLYAGACCXXXXXXXXXXVAYIA 411
           TTAFKVF +CN++AL  SLG V + +S   +  + L  L                 AYIA
Sbjct: 441 TTAFKVFAICNNIALFTSLGIVILLVSIIPYKRKPLKRLLVATHRMMWVSVGFMATAYIA 500

Query: 410 AAWVTTPAIHSQGTGW 363
           A+WVT P  H  GT W
Sbjct: 501 ASWVTIP--HYHGTQW 514


>ref|NP_563867.1| ankyrin repeat-containing protein [Arabidopsis thaliana]
           gi|4914336|gb|AAD32884.1|AC005489_22 F14N23.22
           [Arabidopsis thaliana]
           gi|13937240|gb|AAK50112.1|AF372975_1 At1g10340/F14N23_22
           [Arabidopsis thaliana] gi|19548017|gb|AAL87372.1|
           At1g10340/F14N23_22 [Arabidopsis thaliana]
           gi|332190446|gb|AEE28567.1| ankyrin repeat-containing
           protein [Arabidopsis thaliana]
          Length = 578

 Score = 56.2 bits (134), Expect = 6e-06
 Identities = 31/76 (40%), Positives = 39/76 (51%)
 Frame = -2

Query: 590 TTAFKVFTLCNDVALLLSLGAVAIFMSFFTFSWRGLDFLYAGACCXXXXXXXXXXVAYIA 411
           TTAFKVF +CN++AL  SLG V + +S   +  + L  L                 AYIA
Sbjct: 445 TTAFKVFAICNNIALFTSLGIVILLVSIIPYKRKPLKRLLVATHRMMWVSVGFMATAYIA 504

Query: 410 AAWVTTPAIHSQGTGW 363
           A+WVT P  H  GT W
Sbjct: 505 ASWVTIP--HYHGTQW 518


>ref|XP_006303592.1| hypothetical protein CARUB_v10011143mg [Capsella rubella]
           gi|482572303|gb|EOA36490.1| hypothetical protein
           CARUB_v10011143mg [Capsella rubella]
          Length = 613

 Score = 55.8 bits (133), Expect = 8e-06
 Identities = 30/76 (39%), Positives = 38/76 (50%)
 Frame = -2

Query: 590 TTAFKVFTLCNDVALLLSLGAVAIFMSFFTFSWRGLDFLYAGACCXXXXXXXXXXVAYIA 411
           T AFKVF +CN+VAL  SL  V + +S   + W+ L  L                 AY+A
Sbjct: 461 TAAFKVFAICNNVALFTSLCIVILLVSIIPYQWKPLKNLLVATHRMMWVSVGFMATAYVA 520

Query: 410 AAWVTTPAIHSQGTGW 363
           A+WVT P  H  GT W
Sbjct: 521 ASWVTIP--HLPGTRW 534


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