BLASTX nr result
ID: Cocculus22_contig00020598
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus22_contig00020598
(403 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAB72467.1| putative protein [Arabidopsis thaliana] 63 5e-08
emb|CAB45965.1| putative reverse transcriptase [Arabidopsis thal... 60 3e-07
gb|AAM82604.1|AF525305_2 putative AP endonuclease/reverse transc... 60 4e-07
ref|XP_006584238.1| PREDICTED: uncharacterized protein LOC102664... 58 2e-06
gb|AAG51098.1|AC025295_6 hypothetical protein [Arabidopsis thali... 58 2e-06
dbj|BAB08270.1| non-LTR retroelement reverse transcriptase-like ... 57 3e-06
emb|CAB39942.1| putative protein [Arabidopsis thaliana] gi|72678... 57 3e-06
ref|XP_006605183.1| PREDICTED: uncharacterized protein LOC102663... 57 3e-06
gb|AAF98181.1|AC000107_4 F17F8.5 [Arabidopsis thaliana] 56 6e-06
gb|AAG50886.1|AC025294_24 hypothetical protein [Arabidopsis thal... 56 6e-06
dbj|BAB01344.1| reverse transcriptase-like protein [Arabidopsis ... 55 8e-06
gb|AAG50806.1|AC079281_8 unknown protein [Arabidopsis thaliana] 55 1e-05
>emb|CAB72467.1| putative protein [Arabidopsis thaliana]
Length = 762
Score = 62.8 bits (151), Expect = 5e-08
Identities = 28/64 (43%), Positives = 39/64 (60%), Gaps = 1/64 (1%)
Frame = +2
Query: 215 LKLAWWVASKKDSLWVKWFHGSYIKQNILWSAFDDAN-SSWVWKRILKLRPILEASTSFL 391
LKL W + S DSLWVKW + +K+ I W ++AN SW+WK+ILK R + +
Sbjct: 441 LKLVWRIISHGDSLWVKWVEHNLLKREIFWIVKENANLGSWIWKKILKYRGVAKRFCKAE 500
Query: 392 IGNG 403
+GNG
Sbjct: 501 VGNG 504
>emb|CAB45965.1| putative reverse transcriptase [Arabidopsis thaliana]
gi|7267919|emb|CAB78261.1| putative reverse
transcriptase [Arabidopsis thaliana]
Length = 662
Score = 60.1 bits (144), Expect = 3e-07
Identities = 29/74 (39%), Positives = 41/74 (55%)
Frame = +2
Query: 182 IKSPNQLIAAGLKLAWWVASKKDSLWVKWFHGSYIKQNILWSAFDDANSSWVWKRILKLR 361
IK N + LKL W + S+ DSLWV+W +K+N WS + SW+WK++LK R
Sbjct: 397 IKEANDVCC--LKLIWRIVSQGDSLWVQWIRTYLLKRNTFWSFRSASQGSWMWKKLLKYR 454
Query: 362 PILEASTSFLIGNG 403
+A + I NG
Sbjct: 455 DTAKAFSKVDIRNG 468
>gb|AAM82604.1|AF525305_2 putative AP endonuclease/reverse transcriptase [Brassica napus]
Length = 1214
Score = 59.7 bits (143), Expect = 4e-07
Identities = 24/63 (38%), Positives = 39/63 (61%)
Frame = +2
Query: 215 LKLAWWVASKKDSLWVKWFHGSYIKQNILWSAFDDANSSWVWKRILKLRPILEASTSFLI 394
L+L W + +++DSLWV W H + ++ W+A ++ SW+WK IL LRP+ + +
Sbjct: 880 LRLIWMLFARRDSLWVAWNHANRLRHVNFWNAEAASHHSWIWKAILGLRPLAKRFLRGAV 939
Query: 395 GNG 403
GNG
Sbjct: 940 GNG 942
>ref|XP_006584238.1| PREDICTED: uncharacterized protein LOC102664824 [Glycine max]
Length = 939
Score = 57.8 bits (138), Expect = 2e-06
Identities = 23/52 (44%), Positives = 33/52 (63%)
Frame = +2
Query: 215 LKLAWWVASKKDSLWVKWFHGSYIKQNILWSAFDDANSSWVWKRILKLRPIL 370
LKL W V +K D+LW+KW H YI+ +WS + SW+ ++KLRP+L
Sbjct: 701 LKLLWNVCNKSDNLWIKWLHTYYIRGQSIWSMVLKKSHSWIMSSMMKLRPLL 752
>gb|AAG51098.1|AC025295_6 hypothetical protein [Arabidopsis thaliana]
Length = 504
Score = 57.8 bits (138), Expect = 2e-06
Identities = 26/64 (40%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
Frame = +2
Query: 215 LKLAWWVASKKDSLWVKWFHGSYIKQNILWSAFDDAN-SSWVWKRILKLRPILEASTSFL 391
LKL W + S DSLWVKW S +K+ W+ ++ + SW+W++ILK R I
Sbjct: 218 LKLIWRIISHADSLWVKWIQSSLLKKVFFWAVRENTSLGSWMWRKILKFRDIARTLCKVE 277
Query: 392 IGNG 403
I NG
Sbjct: 278 INNG 281
>dbj|BAB08270.1| non-LTR retroelement reverse transcriptase-like protein
[Arabidopsis thaliana]
Length = 489
Score = 57.0 bits (136), Expect = 3e-06
Identities = 23/50 (46%), Positives = 33/50 (66%), Gaps = 1/50 (2%)
Frame = +2
Query: 215 LKLAWWVASKKDSLWVKWFHGSYIKQNILWSAFDDAN-SSWVWKRILKLR 361
LKL W + S DSLWVKW H + +KQ W+ ++ + SW+WK++LK R
Sbjct: 270 LKLIWRIISHADSLWVKWIHATLLKQVSFWAVRENTSLGSWMWKKVLKFR 319
>emb|CAB39942.1| putative protein [Arabidopsis thaliana] gi|7267871|emb|CAB78214.1|
putative protein [Arabidopsis thaliana]
Length = 473
Score = 57.0 bits (136), Expect = 3e-06
Identities = 26/64 (40%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
Frame = +2
Query: 215 LKLAWWVASKKDSLWVKWFHGSYIKQNILWSAFDDAN-SSWVWKRILKLRPILEASTSFL 391
LKL W + S DSLWVKW S +K+ W+ ++ + SW+W++ILK R I
Sbjct: 137 LKLIWRIISHADSLWVKWIQSSLLKKVSFWAVRENTSLGSWMWRKILKFRDIARTLCKVE 196
Query: 392 IGNG 403
I NG
Sbjct: 197 INNG 200
>ref|XP_006605183.1| PREDICTED: uncharacterized protein LOC102663533 [Glycine max]
Length = 514
Score = 56.6 bits (135), Expect = 3e-06
Identities = 23/54 (42%), Positives = 36/54 (66%)
Frame = +2
Query: 203 IAAGLKLAWWVASKKDSLWVKWFHGSYIKQNILWSAFDDANSSWVWKRILKLRP 364
+ A LK W + SK+D+LWVKW H ++K + + SA +NS+W+ K ++K RP
Sbjct: 358 VTAMLKCLWNICSKEDNLWVKWIHAYFLKGDNVMSATIKSNSTWILKSVMKQRP 411
>gb|AAF98181.1|AC000107_4 F17F8.5 [Arabidopsis thaliana]
Length = 872
Score = 55.8 bits (133), Expect = 6e-06
Identities = 23/64 (35%), Positives = 38/64 (59%), Gaps = 1/64 (1%)
Frame = +2
Query: 215 LKLAWWVASKKDSLWVKWFHGSYIKQNILWSAFDDAN-SSWVWKRILKLRPILEASTSFL 391
LKL W + S +SLW KW I++ +WS + SW+W++ILK+R + ++ +
Sbjct: 535 LKLVWRIISNSNSLWTKWVAEYLIRKKSIWSLKQSTSMGSWIWRKILKIRDVAKSFSRVE 594
Query: 392 IGNG 403
+GNG
Sbjct: 595 VGNG 598
>gb|AAG50886.1|AC025294_24 hypothetical protein [Arabidopsis thaliana]
Length = 629
Score = 55.8 bits (133), Expect = 6e-06
Identities = 26/68 (38%), Positives = 39/68 (57%), Gaps = 1/68 (1%)
Frame = +2
Query: 203 IAAGLKLAWWVASKKDSLWVKWFHGSYIKQNILWSAFDDAN-SSWVWKRILKLRPILEAS 379
+ + LKL W V S DSLWVKW + +KQ WS +++ SW+WK++LK R +
Sbjct: 289 VVSVLKLIWRVTSNDDSLWVKWSKMNLLKQESFWSLTPNSSLGSWMWKKMLKYRETAKPF 348
Query: 380 TSFLIGNG 403
+ + NG
Sbjct: 349 SRVEVNNG 356
>dbj|BAB01344.1| reverse transcriptase-like protein [Arabidopsis thaliana]
Length = 1115
Score = 55.5 bits (132), Expect = 8e-06
Identities = 26/68 (38%), Positives = 39/68 (57%), Gaps = 1/68 (1%)
Frame = +2
Query: 203 IAAGLKLAWWVASKKDSLWVKWFHGSYIKQNILWSAFDDAN-SSWVWKRILKLRPILEAS 379
+ + LKL W V S DSLWVKW + +KQ WS +++ SW+WK++LK R +
Sbjct: 800 VVSVLKLIWRVTSNDDSLWVKWSKMNLLKQESFWSLKPNSSLGSWMWKKMLKYRETAKPF 859
Query: 380 TSFLIGNG 403
+ + NG
Sbjct: 860 SRVEVNNG 867
>gb|AAG50806.1|AC079281_8 unknown protein [Arabidopsis thaliana]
Length = 1213
Score = 55.1 bits (131), Expect = 1e-05
Identities = 22/63 (34%), Positives = 33/63 (52%)
Frame = +2
Query: 215 LKLAWWVASKKDSLWVKWFHGSYIKQNILWSAFDDANSSWVWKRILKLRPILEASTSFLI 394
++L W + KDSLW W H ++ + W+ + SW WKR+L LRP+ +
Sbjct: 881 MRLIWRLFVAKDSLWADWQHLHHLSRGSFWAVEGGQSDSWTWKRLLSLRPLAHQFLVCKV 940
Query: 395 GNG 403
GNG
Sbjct: 941 GNG 943