BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus22_contig00020563
         (585 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002531291.1| pentatricopeptide repeat-containing protein,...   224   2e-56
ref|XP_006382794.1| hypothetical protein POPTR_0005s05510g [Popu...   220   2e-55
ref|XP_002275085.1| PREDICTED: pentatricopeptide repeat-containi...   219   3e-55
ref|XP_006471681.1| PREDICTED: pentatricopeptide repeat-containi...   215   8e-54
ref|XP_006432926.1| hypothetical protein CICLE_v10000494mg [Citr...   215   8e-54
ref|XP_004304748.1| PREDICTED: pentatricopeptide repeat-containi...   215   8e-54
ref|XP_007208317.1| hypothetical protein PRUPE_ppa002960mg [Prun...   213   3e-53
ref|XP_006299672.1| hypothetical protein CARUB_v10015860mg [Caps...   206   5e-51
ref|XP_002884467.1| pentatricopeptide repeat-containing protein ...   200   3e-49
ref|NP_187126.1| pentatricopeptide repeat-containing protein [Ar...   199   4e-49
ref|XP_006408155.1| hypothetical protein EUTSA_v10020244mg [Eutr...   196   3e-48
ref|XP_004171232.1| PREDICTED: pentatricopeptide repeat-containi...   186   5e-45
ref|XP_004139380.1| PREDICTED: pentatricopeptide repeat-containi...   186   5e-45
ref|XP_003559839.1| PREDICTED: pentatricopeptide repeat-containi...   184   2e-44
ref|XP_002466476.1| hypothetical protein SORBIDRAFT_01g008465 [S...   184   2e-44
gb|EAY91821.1| hypothetical protein OsI_13463 [Oryza sativa Indi...   182   6e-44
gb|EAZ28544.1| hypothetical protein OsJ_12524 [Oryza sativa Japo...   181   1e-43
gb|AAP12991.1| hypothetical protein [Oryza sativa Japonica Group...   181   1e-43
ref|XP_006838873.1| hypothetical protein AMTR_s00002p00267090 [A...   181   2e-43
ref|XP_006375836.1| hypothetical protein POPTR_0013s03840g [Popu...   180   2e-43

>ref|XP_002531291.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223529124|gb|EEF31104.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 517

 Score =  224 bits (570), Expect = 2e-56
 Identities = 105/193 (54%), Positives = 144/193 (74%)
 Frame = +1

Query: 4   LSHGKQIHSHAVVVGLSSYKYLHNSLIKMYSEYGEMVLARQVFEQMPQRDAVSFNIMISG 183
           +S  KQ+  HA+++GLS+Y+YL NSLIK+Y E G   LA ++F QMP  D VSFNIMI+G
Sbjct: 141 VSEVKQVQCHAIILGLSTYRYLQNSLIKVYLENGLFCLAHKIFRQMPAPDVVSFNIMITG 200

Query: 184 YSREGCSLEAIAMFHEMIDTSLQSDNFTMVGLLMSCGRLRDTRRGKSIHAWIERRKVGRS 363
            +++GC LEAI + ++M+   L+ D FTM+GLL+SCG+L + R GK++HAWIERRK   S
Sbjct: 201 CAKQGCGLEAIQLLYDMMALDLKPDEFTMLGLLVSCGKLGEARFGKTVHAWIERRKSITS 260

Query: 364 WSSILGNALLDMYAKCEDMQSAIRIFNICKEKDIITWNTIIVGYARIGELKAAQCFFDEM 543
            + ILGNALLDMY KC+++  A R F+   EKD+++WNTII G A+ G+L+ A+  FD+M
Sbjct: 261 SNLILGNALLDMYVKCQELDLAHRTFSALTEKDVVSWNTIIAGCAKAGDLELARTLFDQM 320

Query: 544 PRRDLISWNLLIA 582
           P RD +SWN LIA
Sbjct: 321 PCRDFVSWNSLIA 333



 Score =  100 bits (250), Expect = 2e-19
 Identities = 53/156 (33%), Positives = 93/156 (59%), Gaps = 1/156 (0%)
 Frame = +1

Query: 73  NSLIKMYSEYGEMVLARQVFEQMPQRDAVSFNIMISGYSREGCSLEAIAMFHEMIDTSLQ 252
           N++I   ++ G++ LAR +F+QMP RD VS+N +I+ Y+  G  +    + ++M+  ++ 
Sbjct: 298 NTIIAGCAKAGDLELARTLFDQMPCRDFVSWNSLIAEYANRGDFIIVRDLLYDMVAENVV 357

Query: 253 SDNFTMVGLLMSCGRLRDTRRGKSIHAWIERRKVGRSWSSILGNALLDMYAKCEDMQSAI 432
            +N TM  L+ +   +    +G+  H W+ R ++     ++LG+AL+DMY KC  + +A 
Sbjct: 358 PNNTTMASLISAAAEIGALDQGRWAHGWVIRMQI--KIDAVLGSALIDMYCKCGSINNAF 415

Query: 433 RIFNICKEKDIITWNTIIVGYARIG-ELKAAQCFFD 537
            IFN   EKD+I W T+I G+A  G   KA + F++
Sbjct: 416 LIFNEIIEKDVILWTTMITGFAFHGYGSKALELFYE 451


>ref|XP_006382794.1| hypothetical protein POPTR_0005s05510g [Populus trichocarpa]
           gi|550338164|gb|ERP60591.1| hypothetical protein
           POPTR_0005s05510g [Populus trichocarpa]
          Length = 648

 Score =  220 bits (561), Expect = 2e-55
 Identities = 103/194 (53%), Positives = 143/194 (73%)
 Frame = +1

Query: 4   LSHGKQIHSHAVVVGLSSYKYLHNSLIKMYSEYGEMVLARQVFEQMPQRDAVSFNIMISG 183
           +S  KQIH  A+V GL S+ YL N+LIK+Y E G + LA QVFE+MP  D VSFN+MI G
Sbjct: 147 ISQVKQIHCQAIVTGLFSFGYLQNTLIKVYLENGLVRLAHQVFEKMPSPDIVSFNVMIVG 206

Query: 184 YSREGCSLEAIAMFHEMIDTSLQSDNFTMVGLLMSCGRLRDTRRGKSIHAWIERRKVGRS 363
           Y+++G  LEA+ +FHEM+   L+ D FT++GLL+SCG+L + + GK++H W+ERRK   S
Sbjct: 207 YAKKGFGLEAMRLFHEMVGLGLEPDEFTILGLLVSCGQLGNVKFGKAVHGWMERRKPTIS 266

Query: 364 WSSILGNALLDMYAKCEDMQSAIRIFNICKEKDIITWNTIIVGYARIGELKAAQCFFDEM 543
            + ILGNALLDMY KC+ ++ A+R F   KEKDI++WN I+ G A++GE + A+ FF +M
Sbjct: 267 SNLILGNALLDMYVKCQKVELALRTFGALKEKDIVSWNMIVAGCAKVGEFEQARLFFYQM 326

Query: 544 PRRDLISWNLLIAG 585
           P RD++SWN L+ G
Sbjct: 327 PCRDIVSWNSLVTG 340



 Score = 89.4 bits (220), Expect = 7e-16
 Identities = 50/157 (31%), Positives = 80/157 (50%)
 Frame = +1

Query: 73  NSLIKMYSEYGEMVLARQVFEQMPQRDAVSFNIMISGYSREGCSLEAIAMFHEMIDTSLQ 252
           N ++   ++ GE   AR  F QMP RD VS+N +++GY+  G       +  +M+   + 
Sbjct: 304 NMIVAGCAKVGEFEQARLFFYQMPCRDIVSWNSLVTGYACRGDFASVKELIVDMVMEKVI 363

Query: 253 SDNFTMVGLLMSCGRLRDTRRGKSIHAWIERRKVGRSWSSILGNALLDMYAKCEDMQSAI 432
            D  TM+ L+ +        +G+  H W+ R ++     + LG+AL+DMY KC  ++ A 
Sbjct: 364 PDTVTMISLVSAATESGALDQGRWAHGWVIRMQI--KLDAFLGSALIDMYCKCGSIERAS 421

Query: 433 RIFNICKEKDIITWNTIIVGYARIGELKAAQCFFDEM 543
           R+F    +KD+  W T+I G A  G    A   F EM
Sbjct: 422 RVFKEINKKDVTVWTTMITGLAFHGYGSKALELFSEM 458


>ref|XP_002275085.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04750,
           mitochondrial-like [Vitis vinifera]
          Length = 654

 Score =  219 bits (559), Expect = 3e-55
 Identities = 106/194 (54%), Positives = 142/194 (73%)
 Frame = +1

Query: 4   LSHGKQIHSHAVVVGLSSYKYLHNSLIKMYSEYGEMVLARQVFEQMPQRDAVSFNIMISG 183
           LS   QIH HA++ G   Y YL N+L+K+Y E  +M LA QVF+QM   DAVSFNIMI G
Sbjct: 143 LSQVMQIHCHAIITGSFYYGYLQNTLMKIYLENEKMGLAYQVFQQMAAPDAVSFNIMIFG 202

Query: 184 YSREGCSLEAIAMFHEMIDTSLQSDNFTMVGLLMSCGRLRDTRRGKSIHAWIERRKVGRS 363
           Y+++G ++EA+   HEM+   L+ D FTM+GLL+ CGRL D + GKS+HAWIERR + +S
Sbjct: 203 YAKKGHNIEALKFLHEMVGLGLKPDEFTMLGLLICCGRLGDAQLGKSVHAWIERRGLIKS 262

Query: 364 WSSILGNALLDMYAKCEDMQSAIRIFNICKEKDIITWNTIIVGYARIGELKAAQCFFDEM 543
            + IL NALLDMY KC++++ A  IFN+   KD I+WNT+I GYA++G L+ A  FF++M
Sbjct: 263 SNLILNNALLDMYVKCKELRIAQSIFNVIVRKDTISWNTMIAGYAKVGNLEIAHNFFEDM 322

Query: 544 PRRDLISWNLLIAG 585
           P RDL+SWN +IAG
Sbjct: 323 PCRDLVSWNSIIAG 336



 Score =  100 bits (249), Expect = 3e-19
 Identities = 52/156 (33%), Positives = 88/156 (56%), Gaps = 1/156 (0%)
 Frame = +1

Query: 73  NSLIKMYSEYGEMVLARQVFEQMPQRDAVSFNIMISGYSREGCSLEAIAMFHEMIDTSLQ 252
           N++I  Y++ G + +A   FE MP RD VS+N +I+GY+++G  L    +F  M+  ++ 
Sbjct: 300 NTMIAGYAKVGNLEIAHNFFEDMPCRDLVSWNSIIAGYAQKGDCLMVQRLFENMVAENIW 359

Query: 253 SDNFTMVGLLMSCGRLRDTRRGKSIHAWIERRKVGRSWSSILGNALLDMYAKCEDMQSAI 432
            D  T++ L+ +   +     G+ IH W+ R ++     + LG+A +DMY KC  ++ A 
Sbjct: 360 PDFVTIINLVSAAAEIGALHHGRWIHGWVVRMQM--KIDAFLGSAFIDMYWKCGSIKRAC 417

Query: 433 RIFNICKEKDIITWNTIIVGYARIG-ELKAAQCFFD 537
            +F    EKD+  W T+I G+A  G   KA Q F++
Sbjct: 418 MVFREVTEKDVTVWTTMITGFAFHGYGSKALQLFYE 453


>ref|XP_006471681.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04750,
           mitochondrial-like [Citrus sinensis]
          Length = 655

 Score =  215 bits (547), Expect = 8e-54
 Identities = 103/194 (53%), Positives = 143/194 (73%)
 Frame = +1

Query: 4   LSHGKQIHSHAVVVGLSSYKYLHNSLIKMYSEYGEMVLARQVFEQMPQRDAVSFNIMISG 183
           +S   QIH HAVV+GL SY YL NSL+K+Y E G++ LA ++F      D  SFNIMI G
Sbjct: 143 ISEAMQIHCHAVVLGLVSYGYLQNSLMKIYIENGQIRLAEKLFLCKQSPDVASFNIMIVG 202

Query: 184 YSREGCSLEAIAMFHEMIDTSLQSDNFTMVGLLMSCGRLRDTRRGKSIHAWIERRKVGRS 363
           Y+++GC+LEAI +F++M+++ L+ D FT +GLL+ CG+L D + GKS+HAW+ERRK   S
Sbjct: 203 YAKKGCTLEAIRLFYKMMNSGLEPDEFTALGLLVCCGQLADVQLGKSVHAWMERRKKVSS 262

Query: 364 WSSILGNALLDMYAKCEDMQSAIRIFNICKEKDIITWNTIIVGYARIGELKAAQCFFDEM 543
            + ILGNALLDMY KC+++Q A R F+  + KD ++WNTI+ G A++G+L+ A   F+ M
Sbjct: 263 SNMILGNALLDMYVKCKELQLARRTFDALEVKDAVSWNTIMSGLAKVGQLEYACTLFNHM 322

Query: 544 PRRDLISWNLLIAG 585
           P RD+ISWN LIAG
Sbjct: 323 PNRDIISWNSLIAG 336



 Score = 94.7 bits (234), Expect = 2e-17
 Identities = 49/157 (31%), Positives = 86/157 (54%)
 Frame = +1

Query: 73  NSLIKMYSEYGEMVLARQVFEQMPQRDAVSFNIMISGYSREGCSLEAIAMFHEMIDTSLQ 252
           N+++   ++ G++  A  +F  MP RD +S+N +I+GY++ G  +    +F  MI   ++
Sbjct: 300 NTIMSGLAKVGQLEYACTLFNHMPNRDIISWNSLIAGYAQNGDYVMMRELFINMILDHVK 359

Query: 253 SDNFTMVGLLMSCGRLRDTRRGKSIHAWIERRKVGRSWSSILGNALLDMYAKCEDMQSAI 432
            DN T++ L+ +   +    +G+ IH  + R  +G      LG+ L+DMY KC  ++ A+
Sbjct: 360 PDNITLINLVSAAAEVGAIDQGRWIHGVVVR--MGTMMDEFLGSVLIDMYCKCGSIERAL 417

Query: 433 RIFNICKEKDIITWNTIIVGYARIGELKAAQCFFDEM 543
            +F   +EKD+  W T+I G A  G  + A   F EM
Sbjct: 418 TVFREVREKDVTVWTTMITGLAFHGHGRKALELFSEM 454


>ref|XP_006432926.1| hypothetical protein CICLE_v10000494mg [Citrus clementina]
           gi|557535048|gb|ESR46166.1| hypothetical protein
           CICLE_v10000494mg [Citrus clementina]
          Length = 681

 Score =  215 bits (547), Expect = 8e-54
 Identities = 103/194 (53%), Positives = 143/194 (73%)
 Frame = +1

Query: 4   LSHGKQIHSHAVVVGLSSYKYLHNSLIKMYSEYGEMVLARQVFEQMPQRDAVSFNIMISG 183
           +S   QIH HAVV+GL SY YL NSL+K+Y E G++ LA ++F      D  SFNIMI G
Sbjct: 143 ISEAMQIHCHAVVLGLVSYGYLQNSLMKIYIENGQIRLAEKLFLCKQSPDVASFNIMIVG 202

Query: 184 YSREGCSLEAIAMFHEMIDTSLQSDNFTMVGLLMSCGRLRDTRRGKSIHAWIERRKVGRS 363
           Y+++GC+LEAI +F++M+++ L+ D FT +GLL+ CG+L D + GKS+HAW+ERRK   S
Sbjct: 203 YAKKGCTLEAIRLFYKMMNSGLEPDEFTALGLLVCCGQLADVQLGKSVHAWMERRKKVSS 262

Query: 364 WSSILGNALLDMYAKCEDMQSAIRIFNICKEKDIITWNTIIVGYARIGELKAAQCFFDEM 543
            + ILGNALLDMY KC+++Q A R F+  + KD ++WNTI+ G A++G+L+ A   F+ M
Sbjct: 263 SNMILGNALLDMYVKCKELQLARRTFDALEVKDAVSWNTIMSGLAKVGQLEYACTLFNHM 322

Query: 544 PRRDLISWNLLIAG 585
           P RD+ISWN LIAG
Sbjct: 323 PNRDIISWNSLIAG 336



 Score = 94.7 bits (234), Expect = 2e-17
 Identities = 49/157 (31%), Positives = 86/157 (54%)
 Frame = +1

Query: 73  NSLIKMYSEYGEMVLARQVFEQMPQRDAVSFNIMISGYSREGCSLEAIAMFHEMIDTSLQ 252
           N+++   ++ G++  A  +F  MP RD +S+N +I+GY++ G  +    +F  MI   ++
Sbjct: 300 NTIMSGLAKVGQLEYACTLFNHMPNRDIISWNSLIAGYAQNGDYVMMRELFINMILDHVK 359

Query: 253 SDNFTMVGLLMSCGRLRDTRRGKSIHAWIERRKVGRSWSSILGNALLDMYAKCEDMQSAI 432
            DN T++ L+ +   +    +G+ IH  + R  +G      LG+ L+DMY KC  ++ A+
Sbjct: 360 PDNITLINLVSAAAEVGAIDQGRWIHGVVVR--MGTMMDEFLGSVLIDMYCKCGSIERAL 417

Query: 433 RIFNICKEKDIITWNTIIVGYARIGELKAAQCFFDEM 543
            +F   +EKD+  W T+I G A  G  + A   F EM
Sbjct: 418 TVFREVREKDVTVWTTMITGLAFHGHGRKALELFSEM 454


>ref|XP_004304748.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04750,
           mitochondrial-like [Fragaria vesca subsp. vesca]
          Length = 670

 Score =  215 bits (547), Expect = 8e-54
 Identities = 108/195 (55%), Positives = 141/195 (72%)
 Frame = +1

Query: 1   SLSHGKQIHSHAVVVGLSSYKYLHNSLIKMYSEYGEMVLARQVFEQMPQRDAVSFNIMIS 180
           +LS  KQIH HA+V GL S  YL NSLIKMY E G+M L+  VF  +P  D VSFNIMI 
Sbjct: 161 NLSDVKQIHCHAIVTGLLSQGYLQNSLIKMYMEKGQMELSHLVFHHLPTPDRVSFNIMIV 220

Query: 181 GYSREGCSLEAIAMFHEMIDTSLQSDNFTMVGLLMSCGRLRDTRRGKSIHAWIERRKVGR 360
           GY+R+    EA+ +F++M+D  L+ D+FT++GLLMSCG + D R G S+HAWIERR+   
Sbjct: 221 GYARKEYFSEALQLFYKMMDLGLKPDDFTILGLLMSCGGIGDARLGMSVHAWIERRETIT 280

Query: 361 SWSSILGNALLDMYAKCEDMQSAIRIFNICKEKDIITWNTIIVGYARIGELKAAQCFFDE 540
           S + IL NALLDMY K   +++A  IFN  +EKDI++WNT+  GYA++G L+ A  FF +
Sbjct: 281 S-NLILVNALLDMYVKFNKLETAQNIFNALEEKDIVSWNTMTAGYAKVGNLELAHNFFKQ 339

Query: 541 MPRRDLISWNLLIAG 585
           MPRRDL+SWN LI+G
Sbjct: 340 MPRRDLVSWNSLISG 354



 Score =  107 bits (267), Expect = 2e-21
 Identities = 56/159 (35%), Positives = 90/159 (56%)
 Frame = +1

Query: 73  NSLIKMYSEYGEMVLARQVFEQMPQRDAVSFNIMISGYSREGCSLEAIAMFHEMIDTSLQ 252
           N++   Y++ G + LA   F+QMP+RD VS+N +ISGY++ G     I +FH M+  +++
Sbjct: 318 NTMTAGYAKVGNLELAHNFFKQMPRRDLVSWNSLISGYAKRGEYDMVIKVFHNMVTENVR 377

Query: 253 SDNFTMVGLLMSCGRLRDTRRGKSIHAWIERRKVGRSWSSILGNALLDMYAKCEDMQSAI 432
            DN T+V L+ +   +    +GK +H  I R ++     + LG+AL+DMY K   ++ A 
Sbjct: 378 PDNITLVNLVSAAAEIGALDKGKWMHGLILRMQM--KIDAFLGSALIDMYCKAGSLERAF 435

Query: 433 RIFNICKEKDIITWNTIIVGYARIGELKAAQCFFDEMPR 549
            +F    EKD+  W T+I G+A  G  +     F EM R
Sbjct: 436 LVFRELTEKDVTVWTTLITGFAFHGHGRKGLDLFSEMQR 474


>ref|XP_007208317.1| hypothetical protein PRUPE_ppa002960mg [Prunus persica]
           gi|462403959|gb|EMJ09516.1| hypothetical protein
           PRUPE_ppa002960mg [Prunus persica]
          Length = 617

 Score =  213 bits (542), Expect = 3e-53
 Identities = 105/194 (54%), Positives = 141/194 (72%)
 Frame = +1

Query: 4   LSHGKQIHSHAVVVGLSSYKYLHNSLIKMYSEYGEMVLARQVFEQMPQRDAVSFNIMISG 183
           +S  KQ+HSHAVV GL S+ YL N+L K+Y E G+M LA QVF  +P  D V FNIMI G
Sbjct: 143 VSEAKQLHSHAVVTGLLSHGYLQNTLTKIYMEEGQMGLACQVFRDVPTPDPVLFNIMIVG 202

Query: 184 YSREGCSLEAIAMFHEMIDTSLQSDNFTMVGLLMSCGRLRDTRRGKSIHAWIERRKVGRS 363
           Y++ G   EA+ +F+EM+   L+ D FT++GLL+SCG L D+R G S+HAWIERR +  S
Sbjct: 203 YAKMGYCSEALQLFYEMVGLGLKPDEFTILGLLISCGLLGDSRLGMSVHAWIERRTITSS 262

Query: 364 WSSILGNALLDMYAKCEDMQSAIRIFNICKEKDIITWNTIIVGYARIGELKAAQCFFDEM 543
            + ILGNALL+MY K   ++ A  IFN   +KDI++WNT+  GYA++G+L+ A+ +F +M
Sbjct: 263 -NLILGNALLNMYVKWNKLELAQSIFNALVDKDIVSWNTMTAGYAKVGKLELARTYFKQM 321

Query: 544 PRRDLISWNLLIAG 585
           PRRDL+SWN LIAG
Sbjct: 322 PRRDLVSWNSLIAG 335



 Score =  107 bits (266), Expect = 3e-21
 Identities = 56/159 (35%), Positives = 93/159 (58%)
 Frame = +1

Query: 73  NSLIKMYSEYGEMVLARQVFEQMPQRDAVSFNIMISGYSREGCSLEAIAMFHEMIDTSLQ 252
           N++   Y++ G++ LAR  F+QMP+RD VS+N +I+GY+++G    A+ +F+ MI  +++
Sbjct: 299 NTMTAGYAKVGKLELARTYFKQMPRRDLVSWNSLIAGYAKKGDYTMAVKVFNNMIRVNVR 358

Query: 253 SDNFTMVGLLMSCGRLRDTRRGKSIHAWIERRKVGRSWSSILGNALLDMYAKCEDMQSAI 432
            DN T+V L+ +   +    +GK IH  I R ++       LG+AL+DMY K   ++ A 
Sbjct: 359 PDNITLVNLVSAAAEIGALDQGKRIHGLIVRLQL--KIDVFLGSALIDMYCKAGSIERAF 416

Query: 433 RIFNICKEKDIITWNTIIVGYARIGELKAAQCFFDEMPR 549
            +F    EKD+  W T+I G+   G+   +   F EM R
Sbjct: 417 MVFRGLTEKDVTIWTTMITGFGFHGDGNKSLDLFSEMQR 455


>ref|XP_006299672.1| hypothetical protein CARUB_v10015860mg [Capsella rubella]
           gi|482568381|gb|EOA32570.1| hypothetical protein
           CARUB_v10015860mg [Capsella rubella]
          Length = 651

 Score =  206 bits (523), Expect = 5e-51
 Identities = 96/195 (49%), Positives = 138/195 (70%), Gaps = 1/195 (0%)
 Frame = +1

Query: 4   LSHGKQIHSHAVVVGLSSY-KYLHNSLIKMYSEYGEMVLARQVFEQMPQRDAVSFNIMIS 180
           LS  KQIH H +V G  S   YL NSL+K+Y E G +  A +VF  MP+ D  SFN+MI 
Sbjct: 141 LSEVKQIHCHIIVSGCFSLGNYLWNSLVKLYMELGSLGFAEKVFAIMPEPDVSSFNVMIV 200

Query: 181 GYSREGCSLEAIAMFHEMIDTSLQSDNFTMVGLLMSCGRLRDTRRGKSIHAWIERRKVGR 360
           GY+++G  LEA+ ++++M+   ++ D + ++GLL+  G+L DTR GK +H WIERR+ G 
Sbjct: 201 GYAKKGFCLEALKLYYKMVGDGIEPDEYAVLGLLVCSGQLSDTRLGKGVHGWIERRRPGH 260

Query: 361 SWSSILGNALLDMYAKCEDMQSAIRIFNICKEKDIITWNTIIVGYARIGELKAAQCFFDE 540
           S + IL NALLDMY KC+D   A R F+  K+KD+ +WNT++ G+ R+G+++AAQ FFD+
Sbjct: 261 SSNLILSNALLDMYFKCKDSGLAKRAFDAMKKKDMCSWNTMVAGFVRLGDMEAAQAFFDQ 320

Query: 541 MPRRDLISWNLLIAG 585
           MP+RDL+SWN L+ G
Sbjct: 321 MPKRDLVSWNSLLFG 335



 Score = 99.4 bits (246), Expect = 7e-19
 Identities = 53/159 (33%), Positives = 89/159 (55%), Gaps = 2/159 (1%)
 Frame = +1

Query: 73  NSLIKMYSEYGEMVLARQVFEQMPQRDAVSFNIMISGYSREGCSLEAI-AMFHEMIDT-S 246
           N+++  +   G+M  A+  F+QMP+RD VS+N ++ GYS++GC   A+  +F+EM+ T  
Sbjct: 299 NTMVAGFVRLGDMEAAQAFFDQMPKRDLVSWNSLLFGYSKKGCDQSAVRELFYEMLITEK 358

Query: 247 LQSDNFTMVGLLMSCGRLRDTRRGKSIHAWIERRKVGRSWSSILGNALLDMYAKCEDMQS 426
           ++ D  TMV L+       D   G+ +H  + R ++     + L +AL+DMY KC  ++ 
Sbjct: 359 IKPDRVTMVSLISGAANNGDLSHGRWVHGLVIRLQL--KGDAFLSSALIDMYCKCGIIER 416

Query: 427 AIRIFNICKEKDIITWNTIIVGYARIGELKAAQCFFDEM 543
           A  +F    EKD+  W ++I G A  G  + A   F+ M
Sbjct: 417 AFMVFKTATEKDVTLWTSMITGLAFHGNGQQALQLFENM 455


>ref|XP_002884467.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297330307|gb|EFH60726.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 657

 Score =  200 bits (508), Expect = 3e-49
 Identities = 96/193 (49%), Positives = 135/193 (69%), Gaps = 1/193 (0%)
 Frame = +1

Query: 4   LSHGKQIHSHAVVVG-LSSYKYLHNSLIKMYSEYGEMVLARQVFEQMPQRDAVSFNIMIS 180
           LS  KQIH H +V G LS   YL NSL+K Y E G +  A +VF  MPQ D  SFN+MI 
Sbjct: 145 LSEVKQIHCHIIVSGCLSLGNYLWNSLVKFYMELGSLGFAEKVFAIMPQPDVSSFNVMIV 204

Query: 181 GYSREGCSLEAIAMFHEMIDTSLQSDNFTMVGLLMSCGRLRDTRRGKSIHAWIERRKVGR 360
           GY+++G  LEA+ ++++M+   ++ D +T++GLL+ CG L D R GK +H WIERR    
Sbjct: 205 GYAKQGFGLEALELYYKMVSDGIEPDEYTLLGLLVCCGHLSDIRLGKGVHGWIERRGPVY 264

Query: 361 SWSSILGNALLDMYAKCEDMQSAIRIFNICKEKDIITWNTIIVGYARIGELKAAQCFFDE 540
           S + IL NALLDMY KC++   A R F+  K+KD+ +WNT++VG+ R+G+++AAQ  FD+
Sbjct: 265 SSNLILRNALLDMYFKCKESGLAKRAFDALKKKDMRSWNTMVVGFVRLGDMEAAQAVFDQ 324

Query: 541 MPRRDLISWNLLI 579
           MP+RDL+SWN L+
Sbjct: 325 MPQRDLVSWNSLL 337



 Score = 95.5 bits (236), Expect = 9e-18
 Identities = 54/164 (32%), Positives = 90/164 (54%), Gaps = 2/164 (1%)
 Frame = +1

Query: 73  NSLIKMYSEYGEMVLARQVFEQMPQRDAVSFNIMISGYSREGCSLEAI-AMFHEM-IDTS 246
           N+++  +   G+M  A+ VF+QMPQRD VS+N ++  YS++GC   A+  +F+EM I   
Sbjct: 303 NTMVVGFVRLGDMEAAQAVFDQMPQRDLVSWNSLLFCYSKKGCDQRAVRELFYEMLIVEK 362

Query: 247 LQSDNFTMVGLLMSCGRLRDTRRGKSIHAWIERRKVGRSWSSILGNALLDMYAKCEDMQS 426
           ++ D  TMV L+       +   G+ +H  + R ++     + L +AL+DMY KC  ++ 
Sbjct: 363 VKPDRVTMVSLISGAANNGELSHGRWVHGLMIRLQL--EGDAFLSSALIDMYCKCGLIER 420

Query: 427 AIRIFNICKEKDIITWNTIIVGYARIGELKAAQCFFDEMPRRDL 558
           A  +F    EKD+  W ++I G+A  G  + A   F  M   D+
Sbjct: 421 AFMVFKTATEKDVPLWTSMITGFAFHGYGQQALQLFKRMQEEDV 464


>ref|NP_187126.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75207287|sp|Q9SR01.1|PP212_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At3g04750, mitochondrial; Flags: Precursor
           gi|6175175|gb|AAF04901.1|AC011437_16 hypothetical
           protein [Arabidopsis thaliana]
           gi|332640610|gb|AEE74131.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 661

 Score =  199 bits (507), Expect = 4e-49
 Identities = 96/195 (49%), Positives = 135/195 (69%), Gaps = 1/195 (0%)
 Frame = +1

Query: 4   LSHGKQIHSHAVVVG-LSSYKYLHNSLIKMYSEYGEMVLARQVFEQMPQRDAVSFNIMIS 180
           LS  KQIH H +V G LS   YL NSL+K Y E G   +A +VF +MP  D  SFN+MI 
Sbjct: 146 LSEVKQIHCHIIVSGCLSLGNYLWNSLVKFYMELGNFGVAEKVFARMPHPDVSSFNVMIV 205

Query: 181 GYSREGCSLEAIAMFHEMIDTSLQSDNFTMVGLLMSCGRLRDTRRGKSIHAWIERRKVGR 360
           GY+++G SLEA+ ++ +M+   ++ D +T++ LL+ CG L D R GK +H WIERR    
Sbjct: 206 GYAKQGFSLEALKLYFKMVSDGIEPDEYTVLSLLVCCGHLSDIRLGKGVHGWIERRGPVY 265

Query: 361 SWSSILGNALLDMYAKCEDMQSAIRIFNICKEKDIITWNTIIVGYARIGELKAAQCFFDE 540
           S + IL NALLDMY KC++   A R F+  K+KD+ +WNT++VG+ R+G+++AAQ  FD+
Sbjct: 266 SSNLILSNALLDMYFKCKESGLAKRAFDAMKKKDMRSWNTMVVGFVRLGDMEAAQAVFDQ 325

Query: 541 MPRRDLISWNLLIAG 585
           MP+RDL+SWN L+ G
Sbjct: 326 MPKRDLVSWNSLLFG 340



 Score = 95.1 bits (235), Expect = 1e-17
 Identities = 53/171 (30%), Positives = 91/171 (53%), Gaps = 2/171 (1%)
 Frame = +1

Query: 73  NSLIKMYSEYGEMVLARQVFEQMPQRDAVSFNIMISGYSREGCSLEAI-AMFHEM-IDTS 246
           N+++  +   G+M  A+ VF+QMP+RD VS+N ++ GYS++GC    +  +F+EM I   
Sbjct: 304 NTMVVGFVRLGDMEAAQAVFDQMPKRDLVSWNSLLFGYSKKGCDQRTVRELFYEMTIVEK 363

Query: 247 LQSDNFTMVGLLMSCGRLRDTRRGKSIHAWIERRKVGRSWSSILGNALLDMYAKCEDMQS 426
           ++ D  TMV L+       +   G+ +H  + R ++     + L +AL+DMY KC  ++ 
Sbjct: 364 VKPDRVTMVSLISGAANNGELSHGRWVHGLVIRLQL--KGDAFLSSALIDMYCKCGIIER 421

Query: 427 AIRIFNICKEKDIITWNTIIVGYARIGELKAAQCFFDEMPRRDLISWNLLI 579
           A  +F    EKD+  W ++I G A  G  + A   F  M    +   N+ +
Sbjct: 422 AFMVFKTATEKDVALWTSMITGLAFHGNGQQALQLFGRMQEEGVTPNNVTL 472


>ref|XP_006408155.1| hypothetical protein EUTSA_v10020244mg [Eutrema salsugineum]
           gi|557109301|gb|ESQ49608.1| hypothetical protein
           EUTSA_v10020244mg [Eutrema salsugineum]
          Length = 656

 Score =  196 bits (499), Expect = 3e-48
 Identities = 94/195 (48%), Positives = 137/195 (70%), Gaps = 1/195 (0%)
 Frame = +1

Query: 4   LSHGKQIHSHAVVVG-LSSYKYLHNSLIKMYSEYGEMVLARQVFEQMPQRDAVSFNIMIS 180
           LS  KQIH H +V G LS   YL NSL+ +Y E G +  A +VF+ M + D  SFN MI+
Sbjct: 141 LSEVKQIHCHIIVFGCLSLGNYLWNSLVMVYMELGSLGFAEKVFDTMTEPDVSSFNTMIA 200

Query: 181 GYSREGCSLEAIAMFHEMIDTSLQSDNFTMVGLLMSCGRLRDTRRGKSIHAWIERRKVGR 360
           GY+R+G SLEA+ ++++M+   ++ D + ++GLL+ CG+L D R GK +H WIERRK G 
Sbjct: 201 GYARKGFSLEALELYYKMVGDGIEPDEYAVLGLLVCCGQLSDIRLGKGVHGWIERRKPGS 260

Query: 361 SWSSILGNALLDMYAKCEDMQSAIRIFNICKEKDIITWNTIIVGYARIGELKAAQCFFDE 540
           S + IL NALLDMY KC++     R F++ K+KD+ +WNT++ G+ R+G+++AAQ  F +
Sbjct: 261 SSNLILSNALLDMYFKCKEPGLVKRAFDMMKKKDMRSWNTMVGGFVRLGDMEAAQDVFYQ 320

Query: 541 MPRRDLISWNLLIAG 585
           MP+RDL+SWN L+ G
Sbjct: 321 MPKRDLVSWNSLLFG 335



 Score = 97.4 bits (241), Expect = 2e-18
 Identities = 56/159 (35%), Positives = 89/159 (55%), Gaps = 2/159 (1%)
 Frame = +1

Query: 73  NSLIKMYSEYGEMVLARQVFEQMPQRDAVSFNIMISGYSREGCSLEAIA-MFHEM-IDTS 246
           N+++  +   G+M  A+ VF QMP+RD VS+N ++ GYS++GC   A+  +F EM I   
Sbjct: 299 NTMVGGFVRLGDMEAAQDVFYQMPKRDLVSWNSLLFGYSKKGCDQRAVRELFSEMLIVEK 358

Query: 247 LQSDNFTMVGLLMSCGRLRDTRRGKSIHAWIERRKVGRSWSSILGNALLDMYAKCEDMQS 426
           +  D  T+V L+       +  +G+ +H  + R ++     + LG+AL+DMY KC  ++ 
Sbjct: 359 VIPDRVTVVSLISGAANNGELDQGRWVHGLMIRLRL--KIDAFLGSALIDMYCKCGAIER 416

Query: 427 AIRIFNICKEKDIITWNTIIVGYARIGELKAAQCFFDEM 543
           A  +F    EKD+  W T+I G A  G  K A   F+EM
Sbjct: 417 AFVVFKTVPEKDVTLWTTMITGSAFHGNGKQALQLFEEM 455


>ref|XP_004171232.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04750,
           mitochondrial-like [Cucumis sativus]
          Length = 586

 Score =  186 bits (471), Expect = 5e-45
 Identities = 95/191 (49%), Positives = 137/191 (71%), Gaps = 1/191 (0%)
 Frame = +1

Query: 16  KQIHSHAVVVGL-SSYKYLHNSLIKMYSEYGEMVLARQVFEQMPQRDAVSFNIMISGYSR 192
           KQIH HA+V GL S  +YL NSLIK Y + G    ARQ+F++M  R+ VS+N MI G+++
Sbjct: 82  KQIHCHALVFGLLSKEEYLRNSLIKRYVDNGCFECARQLFDEMSDRNVVSYNTMILGFAK 141

Query: 193 EGCSLEAIAMFHEMIDTSLQSDNFTMVGLLMSCGRLRDTRRGKSIHAWIERRKVGRSWSS 372
            G  L  + +FH+M    L+ D+FTM+GLL+ CG+L +T+ GKS+HA IE + +G S + 
Sbjct: 142 VGNILGILELFHDMRSHGLEPDDFTMLGLLLLCGQLGETKLGKSVHAQIE-KSIGSS-NL 199

Query: 373 ILGNALLDMYAKCEDMQSAIRIFNICKEKDIITWNTIIVGYARIGELKAAQCFFDEMPRR 552
           IL NALLDMY KC +++ A ++F+   EKD ++WNTII GYA++GEL+ A   F+++P R
Sbjct: 200 ILYNALLDMYVKCNELKLARKVFDGPMEKDTVSWNTIIAGYAKVGELELACDLFNQIPTR 259

Query: 553 DLISWNLLIAG 585
           D++SWN LI+G
Sbjct: 260 DIVSWNSLISG 270



 Score = 96.3 bits (238), Expect = 6e-18
 Identities = 51/142 (35%), Positives = 82/142 (57%)
 Frame = +1

Query: 73  NSLIKMYSEYGEMVLARQVFEQMPQRDAVSFNIMISGYSREGCSLEAIAMFHEMIDTSLQ 252
           N++I  Y++ GE+ LA  +F Q+P RD VS+N +ISGY++ G  +    +F  M   +++
Sbjct: 234 NTIIAGYAKVGELELACDLFNQIPTRDIVSWNSLISGYAQNGDYVTVKCLFTRMFAENVK 293

Query: 253 SDNFTMVGLLMSCGRLRDTRRGKSIHAWIERRKVGRSWSSILGNALLDMYAKCEDMQSAI 432
            D  T+V L+ +   +    +G+ IH      K+     +  G+AL+DMY KC  ++ A 
Sbjct: 294 PDKVTIVNLISAVAEMGALDQGRWIHGLAV--KMLTKIEAFSGSALIDMYCKCGSIERAF 351

Query: 433 RIFNICKEKDIITWNTIIVGYA 498
            IFN   EKD+ TW T+I G+A
Sbjct: 352 VIFNQIPEKDVTTWTTMITGFA 373


>ref|XP_004139380.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04750,
           mitochondrial-like [Cucumis sativus]
          Length = 651

 Score =  186 bits (471), Expect = 5e-45
 Identities = 95/191 (49%), Positives = 137/191 (71%), Gaps = 1/191 (0%)
 Frame = +1

Query: 16  KQIHSHAVVVGL-SSYKYLHNSLIKMYSEYGEMVLARQVFEQMPQRDAVSFNIMISGYSR 192
           KQIH HA+V GL S  +YL NSLIK Y + G    ARQ+F++M  R+ VS+N MI G+++
Sbjct: 147 KQIHCHALVFGLLSKEEYLRNSLIKRYVDNGCFECARQLFDEMSDRNVVSYNTMILGFAK 206

Query: 193 EGCSLEAIAMFHEMIDTSLQSDNFTMVGLLMSCGRLRDTRRGKSIHAWIERRKVGRSWSS 372
            G  L  + +FH+M    L+ D+FTM+GLL+ CG+L +T+ GKS+HA IE + +G S + 
Sbjct: 207 VGNILGILELFHDMRSHGLEPDDFTMLGLLLLCGQLGETKLGKSVHAQIE-KSIGSS-NL 264

Query: 373 ILGNALLDMYAKCEDMQSAIRIFNICKEKDIITWNTIIVGYARIGELKAAQCFFDEMPRR 552
           IL NALLDMY KC +++ A ++F+   EKD ++WNTII GYA++GEL+ A   F+++P R
Sbjct: 265 ILYNALLDMYVKCNELKLARKVFDGPMEKDTVSWNTIIAGYAKVGELELACDLFNQIPTR 324

Query: 553 DLISWNLLIAG 585
           D++SWN LI+G
Sbjct: 325 DIVSWNSLISG 335



 Score = 96.3 bits (238), Expect = 6e-18
 Identities = 51/142 (35%), Positives = 82/142 (57%)
 Frame = +1

Query: 73  NSLIKMYSEYGEMVLARQVFEQMPQRDAVSFNIMISGYSREGCSLEAIAMFHEMIDTSLQ 252
           N++I  Y++ GE+ LA  +F Q+P RD VS+N +ISGY++ G  +    +F  M   +++
Sbjct: 299 NTIIAGYAKVGELELACDLFNQIPTRDIVSWNSLISGYAQNGDYVTVKCLFTRMFAENVK 358

Query: 253 SDNFTMVGLLMSCGRLRDTRRGKSIHAWIERRKVGRSWSSILGNALLDMYAKCEDMQSAI 432
            D  T+V L+ +   +    +G+ IH      K+     +  G+AL+DMY KC  ++ A 
Sbjct: 359 PDKVTIVNLISAVAEMGALDQGRWIHGLAV--KMLTKIEAFSGSALIDMYCKCGSIERAF 416

Query: 433 RIFNICKEKDIITWNTIIVGYA 498
            IFN   EKD+ TW T+I G+A
Sbjct: 417 VIFNQIPEKDVTTWTTMITGFA 438


>ref|XP_003559839.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04750,
           mitochondrial-like [Brachypodium distachyon]
          Length = 601

 Score =  184 bits (467), Expect = 2e-44
 Identities = 93/193 (48%), Positives = 124/193 (64%)
 Frame = +1

Query: 7   SHGKQIHSHAVVVGLSSYKYLHNSLIKMYSEYGEMVLARQVFEQMPQRDAVSFNIMISGY 186
           S GKQ+H+H +V GL S  YL NSLIKMY + G+   A  +F+ +P  D VS NIM+SGY
Sbjct: 134 SVGKQVHAHVLVNGLHSRVYLRNSLIKMYLDAGDAETAEAMFQSVPVPDVVSCNIMLSGY 193

Query: 187 SREGCSLEAIAMFHEMIDTSLQSDNFTMVGLLMSCGRLRDTRRGKSIHAWIERRKVGRSW 366
            + GC + A+ +F +M    +  D +  V LL  CGRL++   G+S+H  + RR   +  
Sbjct: 194 VKGGCVVNALQLFRDMASREIGVDQYAAVALLSCCGRLKNALLGRSVHGVVVRRMDIKDR 253

Query: 367 SSILGNALLDMYAKCEDMQSAIRIFNICKEKDIITWNTIIVGYARIGELKAAQCFFDEMP 546
             IL NALLDMYAKC +M +A+R+F   KEKD I+WNT+I G+A  G L  A  FF + P
Sbjct: 254 GLILSNALLDMYAKCGEMNTAMRVFGEAKEKDDISWNTMIAGFANDGMLDLASKFFFDAP 313

Query: 547 RRDLISWNLLIAG 585
            RDLISWN L+AG
Sbjct: 314 CRDLISWNTLLAG 326



 Score = 77.4 bits (189), Expect = 3e-12
 Identities = 41/142 (28%), Positives = 75/142 (52%)
 Frame = +1

Query: 73  NSLIKMYSEYGEMVLARQVFEQMPQRDAVSFNIMISGYSREGCSLEAIAMFHEMIDTSLQ 252
           N++I  ++  G + LA + F   P RD +S+N +++GY R       + +F++M+ + ++
Sbjct: 290 NTMIAGFANDGMLDLASKFFFDAPCRDLISWNTLLAGYGRCREFAAVMELFNDMLSSRVR 349

Query: 253 SDNFTMVGLLMSCGRLRDTRRGKSIHAWIERRKVGRSWSSILGNALLDMYAKCEDMQSAI 432
            D  T V L+ +         GKS+H W+   K   +  + L + L+DMY KC +++ A 
Sbjct: 350 PDKVTAVTLISAAVSKGALNLGKSVHGWV--LKEHGTQDAFLASTLVDMYCKCGNVKLAY 407

Query: 433 RIFNICKEKDIITWNTIIVGYA 498
            +F    +KD+  W  +I G A
Sbjct: 408 AVFEKALDKDVTLWTAMISGLA 429


>ref|XP_002466476.1| hypothetical protein SORBIDRAFT_01g008465 [Sorghum bicolor]
           gi|241920330|gb|EER93474.1| hypothetical protein
           SORBIDRAFT_01g008465 [Sorghum bicolor]
          Length = 599

 Score =  184 bits (467), Expect = 2e-44
 Identities = 98/195 (50%), Positives = 123/195 (63%), Gaps = 1/195 (0%)
 Frame = +1

Query: 4   LSHGKQIHSHAVVVGLSSYKYLHNSLIKMYSEYGEMVLARQVFEQMPQRDAVSFNIMISG 183
           LS G+Q+H+H VV G  S  YL NSLIKMY + G++  A  +F      D VS NIM+SG
Sbjct: 140 LSAGRQVHAHVVVSGFHSRVYLRNSLIKMYIDAGDVETAELMFRSALVLDTVSCNIMLSG 199

Query: 184 YSREGCSLEAIAMFHEMIDTSLQSDNFTMVGLLMSCGRLRDTRRGKSIHAWIERRK-VGR 360
           Y  EGCSL+A+  F +M    + +D +T V LL  CGRL+    G+S+H  I RR   G 
Sbjct: 200 YVNEGCSLKALCFFRDMASRGIVADRYTAVALLTCCGRLKTVLLGRSVHGVIVRRMDAGD 259

Query: 361 SWSSILGNALLDMYAKCEDMQSAIRIFNICKEKDIITWNTIIVGYARIGELKAAQCFFDE 540
           +W  IL NALLDMYAKC  M +A R+F    EKD I+WNT++ G+A  G L  A  FF E
Sbjct: 260 NWL-ILVNALLDMYAKCGRMNAAERVFGEASEKDGISWNTMVSGFANAGMLDLASRFFSE 318

Query: 541 MPRRDLISWNLLIAG 585
            P RDLISWN L+AG
Sbjct: 319 APSRDLISWNALLAG 333



 Score = 83.6 bits (205), Expect = 4e-14
 Identities = 42/142 (29%), Positives = 77/142 (54%)
 Frame = +1

Query: 73  NSLIKMYSEYGEMVLARQVFEQMPQRDAVSFNIMISGYSREGCSLEAIAMFHEMIDTSLQ 252
           N+++  ++  G + LA + F + P RD +S+N +++GY+R     E + +FH+M+ + + 
Sbjct: 297 NTMVSGFANAGMLDLASRFFSEAPSRDLISWNALLAGYARYKGFNEVMKLFHDMLASCVN 356

Query: 253 SDNFTMVGLLMSCGRLRDTRRGKSIHAWIERRKVGRSWSSILGNALLDMYAKCEDMQSAI 432
            D  T V L+            KSIH W+  ++ G    + L +AL+DM+ KC +++ A 
Sbjct: 357 PDKVTAVTLISVAAGKGSLNHAKSIHGWVV-KQFGHQ-DAFLASALVDMHCKCGNVKVAY 414

Query: 433 RIFNICKEKDIITWNTIIVGYA 498
            +F    +KD+  W  +I G A
Sbjct: 415 YVFEKALDKDVTLWTAMISGLA 436


>gb|EAY91821.1| hypothetical protein OsI_13463 [Oryza sativa Indica Group]
          Length = 468

 Score =  182 bits (462), Expect = 6e-44
 Identities = 93/193 (48%), Positives = 123/193 (63%)
 Frame = +1

Query: 7   SHGKQIHSHAVVVGLSSYKYLHNSLIKMYSEYGEMVLARQVFEQMPQRDAVSFNIMISGY 186
           S GKQ+H+H VV GL S  YL NSLIKMY + G++  A  +F   P  DAVS NIM+SGY
Sbjct: 145 SVGKQVHAHVVVTGLHSRVYLRNSLIKMYLDAGDVEAAEAMFRCAPTADAVSCNIMLSGY 204

Query: 187 SREGCSLEAIAMFHEMIDTSLQSDNFTMVGLLMSCGRLRDTRRGKSIHAWIERRKVGRSW 366
            + GCS +A+  F  M    +  D +T V LL  CGRL+    G+S+H  + RR      
Sbjct: 205 VKGGCSGKALRFFRGMASRGIGVDQYTAVALLACCGRLKKAVLGRSVHGVVVRRIGVADR 264

Query: 367 SSILGNALLDMYAKCEDMQSAIRIFNICKEKDIITWNTIIVGYARIGELKAAQCFFDEMP 546
             IL NALLDMYAKC +M +A+R+F+   E+D I+WNT++ G+A  G L  A  +F E+P
Sbjct: 265 GLILSNALLDMYAKCGEMNTAMRVFDEAGERDGISWNTMVAGFANAGLLDLASKYFGEVP 324

Query: 547 RRDLISWNLLIAG 585
            RD+ISWN L+AG
Sbjct: 325 ARDIISWNALLAG 337


>gb|EAZ28544.1| hypothetical protein OsJ_12524 [Oryza sativa Japonica Group]
          Length = 559

 Score =  181 bits (460), Expect = 1e-43
 Identities = 93/193 (48%), Positives = 122/193 (63%)
 Frame = +1

Query: 7   SHGKQIHSHAVVVGLSSYKYLHNSLIKMYSEYGEMVLARQVFEQMPQRDAVSFNIMISGY 186
           S GKQ+H+H VV GL S  YL NSLIKMY + G++  A  +F   P  DAVS NIM+SGY
Sbjct: 28  SVGKQVHAHVVVTGLHSRVYLRNSLIKMYLDAGDVEAAEAMFRCAPTADAVSCNIMLSGY 87

Query: 187 SREGCSLEAIAMFHEMIDTSLQSDNFTMVGLLMSCGRLRDTRRGKSIHAWIERRKVGRSW 366
            + GCS +A+  F  M    +  D +T V LL  CGRL+    G+S+H  + RR      
Sbjct: 88  VKGGCSGKALRFFRGMASRGIGVDQYTAVALLACCGRLKKAVLGRSVHGVVVRRIGVADR 147

Query: 367 SSILGNALLDMYAKCEDMQSAIRIFNICKEKDIITWNTIIVGYARIGELKAAQCFFDEMP 546
             IL NALLDMYAKC +M +A+R+F+   E+D I+WNT++ G+A  G L  A  +F E P
Sbjct: 148 GLILSNALLDMYAKCGEMNTAMRVFDEAGERDGISWNTMVAGFANAGLLDLASKYFGEAP 207

Query: 547 RRDLISWNLLIAG 585
            RD+ISWN L+AG
Sbjct: 208 ARDIISWNALLAG 220



 Score = 82.8 bits (203), Expect = 6e-14
 Identities = 46/157 (29%), Positives = 81/157 (51%)
 Frame = +1

Query: 73  NSLIKMYSEYGEMVLARQVFEQMPQRDAVSFNIMISGYSREGCSLEAIAMFHEMIDTSLQ 252
           N+++  ++  G + LA + F + P RD +S+N +++GY+R       + +FH+M+ +S+ 
Sbjct: 184 NTMVAGFANAGLLDLASKYFGEAPARDIISWNALLAGYARYEEFSATMILFHDMLASSVI 243

Query: 253 SDNFTMVGLLMSCGRLRDTRRGKSIHAWIERRKVGRSWSSILGNALLDMYAKCEDMQSAI 432
            D  T V L+ +          +S+H W+   K   +  S L +AL+DMY KC  ++ A 
Sbjct: 244 PDKVTAVTLISAVAGKGTLNSARSVHGWVV--KEHGTQDSFLASALVDMYCKCGSIKLAY 301

Query: 433 RIFNICKEKDIITWNTIIVGYARIGELKAAQCFFDEM 543
            +F    +KD+  W  +I G A  G    A   F +M
Sbjct: 302 AVFEKAVDKDVTLWTAMISGLAFHGHGDVALDLFWKM 338


>gb|AAP12991.1| hypothetical protein [Oryza sativa Japonica Group]
           gi|40539031|gb|AAR87288.1| putative PPR repeat
           containing protein [Oryza sativa Japonica Group]
           gi|108711017|gb|ABF98812.1| pentatricopeptide, putative,
           expressed [Oryza sativa Japonica Group]
          Length = 676

 Score =  181 bits (460), Expect = 1e-43
 Identities = 93/193 (48%), Positives = 122/193 (63%)
 Frame = +1

Query: 7   SHGKQIHSHAVVVGLSSYKYLHNSLIKMYSEYGEMVLARQVFEQMPQRDAVSFNIMISGY 186
           S GKQ+H+H VV GL S  YL NSLIKMY + G++  A  +F   P  DAVS NIM+SGY
Sbjct: 145 SVGKQVHAHVVVTGLHSRVYLRNSLIKMYLDAGDVEAAEAMFRCAPTADAVSCNIMLSGY 204

Query: 187 SREGCSLEAIAMFHEMIDTSLQSDNFTMVGLLMSCGRLRDTRRGKSIHAWIERRKVGRSW 366
            + GCS +A+  F  M    +  D +T V LL  CGRL+    G+S+H  + RR      
Sbjct: 205 VKGGCSGKALRFFRGMASRGIGVDQYTAVALLACCGRLKKAVLGRSVHGVVVRRIGVADR 264

Query: 367 SSILGNALLDMYAKCEDMQSAIRIFNICKEKDIITWNTIIVGYARIGELKAAQCFFDEMP 546
             IL NALLDMYAKC +M +A+R+F+   E+D I+WNT++ G+A  G L  A  +F E P
Sbjct: 265 GLILSNALLDMYAKCGEMNTAMRVFDEAGERDGISWNTMVAGFANAGLLDLASKYFGEAP 324

Query: 547 RRDLISWNLLIAG 585
            RD+ISWN L+AG
Sbjct: 325 ARDIISWNALLAG 337



 Score = 82.8 bits (203), Expect = 6e-14
 Identities = 46/157 (29%), Positives = 81/157 (51%)
 Frame = +1

Query: 73  NSLIKMYSEYGEMVLARQVFEQMPQRDAVSFNIMISGYSREGCSLEAIAMFHEMIDTSLQ 252
           N+++  ++  G + LA + F + P RD +S+N +++GY+R       + +FH+M+ +S+ 
Sbjct: 301 NTMVAGFANAGLLDLASKYFGEAPARDIISWNALLAGYARYEEFSATMILFHDMLASSVI 360

Query: 253 SDNFTMVGLLMSCGRLRDTRRGKSIHAWIERRKVGRSWSSILGNALLDMYAKCEDMQSAI 432
            D  T V L+ +          +S+H W+   K   +  S L +AL+DMY KC  ++ A 
Sbjct: 361 PDKVTAVTLISAVAGKGTLNSARSVHGWVV--KEHGTQDSFLASALVDMYCKCGSIKLAY 418

Query: 433 RIFNICKEKDIITWNTIIVGYARIGELKAAQCFFDEM 543
            +F    +KD+  W  +I G A  G    A   F +M
Sbjct: 419 AVFEKAVDKDVTLWTAMISGLAFHGHGDVALDLFWKM 455


>ref|XP_006838873.1| hypothetical protein AMTR_s00002p00267090 [Amborella trichopoda]
           gi|548841379|gb|ERN01442.1| hypothetical protein
           AMTR_s00002p00267090 [Amborella trichopoda]
          Length = 622

 Score =  181 bits (458), Expect = 2e-43
 Identities = 94/196 (47%), Positives = 126/196 (64%), Gaps = 2/196 (1%)
 Frame = +1

Query: 4   LSHGKQIHSHAVVVGL-SSYKYLHNSLIKMYSEYGEMVLARQVFEQM-PQRDAVSFNIMI 177
           LS  +QIHSHA+  G   SY YL N+ IK+YS+   + LA QVF QM   +D VS+N MI
Sbjct: 106 LSEVRQIHSHAIATGFFPSYPYLQNAFIKVYSDRQRVDLASQVFNQMHDSQDVVSWNSMI 165

Query: 178 SGYSREGCSLEAIAMFHEMIDTSLQSDNFTMVGLLMSCGRLRDTRRGKSIHAWIERRKVG 357
            G++R GC  +A+ +FH+M    + +D FT+VG L++CGR+ D   GKSIHAW       
Sbjct: 166 MGHARHGCPYKALWLFHDMGVAGIIADEFTLVGSLVACGRIEDASMGKSIHAWTICHWGP 225

Query: 358 RSWSSILGNALLDMYAKCEDMQSAIRIFNICKEKDIITWNTIIVGYARIGELKAAQCFFD 537
            + +  + NA +DMY KC ++  A R+FN   EKDI +WNT+I GYA+IGEL  A   F 
Sbjct: 226 SNINMTMSNAFIDMYVKCGELGFAKRVFNGLMEKDIFSWNTMIAGYAKIGELGLALRLFY 285

Query: 538 EMPRRDLISWNLLIAG 585
           EMP RD +SWN +I G
Sbjct: 286 EMPSRDQVSWNSIIDG 301



 Score = 95.9 bits (237), Expect = 7e-18
 Identities = 49/157 (31%), Positives = 89/157 (56%)
 Frame = +1

Query: 73  NSLIKMYSEYGEMVLARQVFEQMPQRDAVSFNIMISGYSREGCSLEAIAMFHEMIDTSLQ 252
           N++I  Y++ GE+ LA ++F +MP RD VS+N +I GY+++G     + +F EM+  +  
Sbjct: 265 NTMIAGYAKIGELGLALRLFYEMPSRDQVSWNSIIDGYAQKGNFGVVMELFVEMLAQNAV 324

Query: 253 SDNFTMVGLLMSCGRLRDTRRGKSIHAWIERRKVGRSWSSILGNALLDMYAKCEDMQSAI 432
            D  T++ L+ + G      +G+ +H W++R  +       L +AL+ MY KC  ++ A 
Sbjct: 325 PDRATILSLVAAAGEAGALDQGRWVHGWVQRAHI--DMDPFLCSALITMYCKCGSVEHAK 382

Query: 433 RIFNICKEKDIITWNTIIVGYARIGELKAAQCFFDEM 543
           ++F + +E+D++ W  +I G A  G    A   F +M
Sbjct: 383 KVFKLARERDVLIWTAMISGLAFHGYGTDALGLFSQM 419


>ref|XP_006375836.1| hypothetical protein POPTR_0013s03840g [Populus trichocarpa]
           gi|550324899|gb|ERP53633.1| hypothetical protein
           POPTR_0013s03840g [Populus trichocarpa]
          Length = 397

 Score =  180 bits (457), Expect = 2e-43
 Identities = 84/166 (50%), Positives = 116/166 (69%)
 Frame = +1

Query: 88  MYSEYGEMVLARQVFEQMPQRDAVSFNIMISGYSREGCSLEAIAMFHEMIDTSLQSDNFT 267
           +Y E G M LA QVFE+MP  D VS  I I GY+++G  LEA+ +FHEM+   L+ D FT
Sbjct: 4   VYLENGLMRLAHQVFEEMPSPDVVSLKITIVGYAKKGFGLEAMRLFHEMVGLGLEPDEFT 63

Query: 268 MVGLLMSCGRLRDTRRGKSIHAWIERRKVGRSWSSILGNALLDMYAKCEDMQSAIRIFNI 447
           M+GLL+ CG+L D + G+++H W+ERR    S   ILG AL+D+Y KC++++ A R F  
Sbjct: 64  MLGLLVFCGQLGDVKFGRAVHGWMERRMSTMSSDLILGYALMDIYVKCQELELASRTFGA 123

Query: 448 CKEKDIITWNTIIVGYARIGELKAAQCFFDEMPRRDLISWNLLIAG 585
            K+KD+++WN II G A +GEL+ A  FFD+MP RD++SWN LI G
Sbjct: 124 LKKKDVVSWNMIIAGCAEVGELEQAWMFFDQMPCRDIVSWNSLITG 169