BLASTX nr result
ID: Cocculus22_contig00020453
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus22_contig00020453
(819 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002265722.2| PREDICTED: pentatricopeptide repeat-containi... 368 2e-99
ref|XP_006467621.1| PREDICTED: pentatricopeptide repeat-containi... 359 6e-97
ref|XP_004294643.1| PREDICTED: pentatricopeptide repeat-containi... 351 2e-94
ref|XP_007214267.1| hypothetical protein PRUPE_ppa025121mg [Prun... 350 5e-94
gb|EXB84044.1| hypothetical protein L484_005808 [Morus notabilis] 348 2e-93
ref|XP_002305733.2| hypothetical protein POPTR_0004s05810g, part... 342 1e-91
ref|XP_007025334.1| Pentatricopeptide, putative [Theobroma cacao... 341 2e-91
ref|XP_004150218.1| PREDICTED: pentatricopeptide repeat-containi... 336 7e-90
gb|AHB18405.1| pentatricopeptide repeat-containing protein [Goss... 334 3e-89
ref|XP_004504288.1| PREDICTED: pentatricopeptide repeat-containi... 328 2e-87
ref|XP_006597484.1| PREDICTED: pentatricopeptide repeat-containi... 327 3e-87
ref|XP_003629790.1| Pentatricopeptide repeat-containing protein ... 327 3e-87
ref|XP_007148025.1| hypothetical protein PHAVU_006G174200g [Phas... 324 3e-86
ref|XP_003608008.1| Pentatricopeptide repeat-containing protein ... 322 1e-85
ref|XP_006585174.1| PREDICTED: pentatricopeptide repeat-containi... 317 3e-84
ref|XP_002522236.1| pentatricopeptide repeat-containing protein,... 316 6e-84
ref|XP_006282442.1| hypothetical protein CARUB_v10004110mg [Caps... 313 4e-83
ref|XP_002870024.1| pentatricopeptide repeat-containing protein ... 313 6e-83
dbj|BAD94843.1| putative protein [Arabidopsis thaliana] 308 2e-81
ref|NP_193610.1| pentatricopeptide repeat protein DOT4 [Arabidop... 308 2e-81
>ref|XP_002265722.2| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Vitis vinifera]
Length = 824
Score = 368 bits (944), Expect = 2e-99
Identities = 177/271 (65%), Positives = 217/271 (80%)
Frame = +2
Query: 2 SNGLAEKGRETFSQMRFREFEVDLATMVSVLPACAEMGMLLLGRAIHGHALKGRGFTGEV 181
SNGL+EKG + F QM DLATMVSV+ C+ GMLLLGRA+HG+A+K F E+
Sbjct: 228 SNGLSEKGLDLFEQMLLLGINTDLATMVSVVAGCSNTGMLLLGRALHGYAIKA-SFGKEL 286
Query: 182 KFNNSLLDMYAKCGDLGSAIQVFGKMDKRCVVSWTSMISAYAREGHCDVAIELFREMEGE 361
NN LLDMY+K G+L SAIQVF M +R VVSWTSMI+ YAREG D+++ LF EME E
Sbjct: 287 TLNNCLLDMYSKSGNLNSAIQVFETMGERSVVSWTSMIAGYAREGLSDMSVRLFHEMEKE 346
Query: 362 GIKPDLYTITSVLHACACNGLLKDGKDVHEYIINNSLQSNLFVANALMELYAKCGSMSDA 541
GI PD++TIT++LHACAC GLL++GKDVH YI N +QS+LFV+NALM++YAKCGSM DA
Sbjct: 347 GISPDIFTITTILHACACTGLLENGKDVHNYIKENKMQSDLFVSNALMDMYAKCGSMGDA 406
Query: 542 RLVFDQMPVRDVISWNTMIGGYSKNCLPNEALKLFMKMQLEFKPNSVTMSCILPACASLS 721
VF +M V+D++SWNTMIGGYSKN LPNEAL LF++MQ KPNS+TM+CILPACASL+
Sbjct: 407 HSVFSEMQVKDIVSWNTMIGGYSKNSLPNEALNLFVEMQYNSKPNSITMACILPACASLA 466
Query: 722 ALERGREVHASILRNGFSFDHYVSNALIDMY 814
ALERG+E+H ILRNGFS D +V+NAL+DMY
Sbjct: 467 ALERGQEIHGHILRNGFSLDRHVANALVDMY 497
Score = 164 bits (414), Expect = 5e-38
Identities = 86/244 (35%), Positives = 143/244 (58%), Gaps = 1/244 (0%)
Frame = +2
Query: 8 GLAEKGRETFSQMRFREFEVDLATMVSVLPACAEMGMLLLGRAIHGHALKGRGFTGEVKF 187
GL++ F +M D+ T+ ++L ACA G+L G+ +H + +K ++
Sbjct: 331 GLSDMSVRLFHEMEKEGISPDIFTITTILHACACTGLLENGKDVHNY-IKENKMQSDLFV 389
Query: 188 NNSLLDMYAKCGDLGSAIQVFGKMDKRCVVSWTSMISAYAREGHCDVAIELFREMEGEGI 367
+N+L+DMYAKCG +G A VF +M + +VSW +MI Y++ + A+ LF EM+
Sbjct: 390 SNALMDMYAKCGSMGDAHSVFSEMQVKDIVSWNTMIGGYSKNSLPNEALNLFVEMQYNS- 448
Query: 368 KPDLYTITSVLHACACNGLLKDGKDVHEYIINNSLQSNLFVANALMELYAKCGSMSDARL 547
KP+ T+ +L ACA L+ G+++H +I+ N + VANAL+++Y KCG++ ARL
Sbjct: 449 KPNSITMACILPACASLAALERGQEIHGHILRNGFSLDRHVANALVDMYLKCGALGLARL 508
Query: 548 VFDQMPVRDVISWNTMIGGYSKNCLPNEALKLFMKMQLE-FKPNSVTMSCILPACASLSA 724
+FD +P +D++SW MI GY + +EA+ F +M+ +P+ V+ IL AC+
Sbjct: 509 LFDMIPEKDLVSWTVMIAGYGMHGYGSEAIAAFNEMRNSGIEPDEVSFISILYACSHSGL 568
Query: 725 LERG 736
L+ G
Sbjct: 569 LDEG 572
Score = 149 bits (377), Expect = 9e-34
Identities = 101/301 (33%), Positives = 153/301 (50%), Gaps = 49/301 (16%)
Frame = +2
Query: 62 EVDLATMVSVLPACAEMGMLLLGRAIH-------------------------GHALKGRG 166
+++L T SVL CA++ + GR IH G +GR
Sbjct: 98 DLELRTYCSVLQLCADLKSIQDGRRIHSIIQSNDVEVDGVLGSKLVFMYVTCGDLREGRR 157
Query: 167 FTGEVKFN-----NSLLDMYAKCG-------------DLG-----SAIQVFGKMDKRCVV 277
+V N L++ YAK G +LG SA ++F ++ R V+
Sbjct: 158 IFDKVANEKVFLWNLLMNGYAKIGNFRESLSLFKRMRELGIRRVESARKLFDELGDRDVI 217
Query: 278 SWTSMISAYAREGHCDVAIELFREMEGEGIKPDLYTITSVLHACACNGLLKDGKDVHEYI 457
SW SMIS Y G + ++LF +M GI DL T+ SV+ C+ G+L G+ +H Y
Sbjct: 218 SWNSMISGYVSNGLSEKGLDLFEQMLLLGINTDLATMVSVVAGCSNTGMLLLGRALHGYA 277
Query: 458 INNSLQSNLFVANALMELYAKCGSMSDARLVFDQMPVRDVISWNTMIGGYSKNCLPNEAL 637
I S L + N L+++Y+K G+++ A VF+ M R V+SW +MI GY++ L + ++
Sbjct: 278 IKASFGKELTLNNCLLDMYSKSGNLNSAIQVFETMGERSVVSWTSMIAGYAREGLSDMSV 337
Query: 638 KLFMKMQLE-FKPNSVTMSCILPACASLSALERGREVHASILRNGFSFDHYVSNALIDMY 814
+LF +M+ E P+ T++ IL ACA LE G++VH I N D +VSNAL+DMY
Sbjct: 338 RLFHEMEKEGISPDIFTITTILHACACTGLLENGKDVHNYIKENKMQSDLFVSNALMDMY 397
Query: 815 A 817
A
Sbjct: 398 A 398
Score = 117 bits (294), Expect = 4e-24
Identities = 69/202 (34%), Positives = 109/202 (53%), Gaps = 2/202 (0%)
Frame = +2
Query: 5 NGLAEKGRETFSQMRFREFEVDLATMVSVLPACAEMGMLLLGRAIHGHALKGRGFTGEVK 184
N L + F +M++ + + TM +LPACA + L G+ IHGH L+ GF+ +
Sbjct: 431 NSLPNEALNLFVEMQYNS-KPNSITMACILPACASLAALERGQEIHGHILRN-GFSLDRH 488
Query: 185 FNNSLLDMYAKCGDLGSAIQVFGKMDKRCVVSWTSMISAYAREGHCDVAIELFREMEGEG 364
N+L+DMY KCG LG A +F + ++ +VSWT MI+ Y G+ AI F EM G
Sbjct: 489 VANALVDMYLKCGALGLARLLFDMIPEKDLVSWTVMIAGYGMHGYGSEAIAAFNEMRNSG 548
Query: 365 IKPDLYTITSVLHACACNGLLKDGKDVHEYIINN-SLQSNLFVANALMELYAKCGSMSDA 541
I+PD + S+L+AC+ +GLL +G + NN ++ +++L A+ G++S A
Sbjct: 549 IEPDEVSFISILYACSHSGLLDEGWGFFNMMRNNCCIEPKSEHYACIVDLLARAGNLSKA 608
Query: 542 RLVFDQMPVR-DVISWNTMIGG 604
MP+ D W ++ G
Sbjct: 609 YKFIKMMPIEPDATIWGALLCG 630
Score = 72.8 bits (177), Expect = 1e-10
Identities = 56/257 (21%), Positives = 106/257 (41%), Gaps = 52/257 (20%)
Frame = +2
Query: 203 DMYAKCGDLGSAIQVFGKMDKRCVVSWTSMISAYAREGHCDVAIELFREMEGEGIKPDLY 382
++Y C +G+++ +D + + + I + G+ A+EL + KPDL
Sbjct: 46 NLYHSCATIGTSVLPSETIDCK-ITDYNIEICRFCELGNLRRAMELINQSP----KPDLE 100
Query: 383 --TITSVLHACACNGLLKDGKDVHEYIINNSLQSNLFVANALMELYAKCGSMSDARLVFD 556
T SVL CA ++DG+ +H I +N ++ + + + L+ +Y CG + + R +FD
Sbjct: 101 LRTYCSVLQLCADLKSIQDGRRIHSIIQSNDVEVDGVLGSKLVFMYVTCGDLREGRRIFD 160
Query: 557 QMPVRDVISWNTMIGGYSKNCLPNEALKLFMKMQ-------------------------- 658
++ V WN ++ GY+K E+L LF +M+
Sbjct: 161 KVANEKVFLWNLLMNGYAKIGNFRESLSLFKRMRELGIRRVESARKLFDELGDRDVISWN 220
Query: 659 ------------------------LEFKPNSVTMSCILPACASLSALERGREVHASILRN 766
L + TM ++ C++ L GR +H ++
Sbjct: 221 SMISGYVSNGLSEKGLDLFEQMLLLGINTDLATMVSVVAGCSNTGMLLLGRALHGYAIKA 280
Query: 767 GFSFDHYVSNALIDMYA 817
F + ++N L+DMY+
Sbjct: 281 SFGKELTLNNCLLDMYS 297
>ref|XP_006467621.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Citrus sinensis]
Length = 872
Score = 359 bits (922), Expect = 6e-97
Identities = 176/271 (64%), Positives = 216/271 (79%)
Frame = +2
Query: 2 SNGLAEKGRETFSQMRFREFEVDLATMVSVLPACAEMGMLLLGRAIHGHALKGRGFTGEV 181
+NG+AEKG E F +M F VDLATMV+VL CA G L+ GRA+H ALK F+ E+
Sbjct: 276 ANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKAC-FSKEI 334
Query: 182 KFNNSLLDMYAKCGDLGSAIQVFGKMDKRCVVSWTSMISAYAREGHCDVAIELFREMEGE 361
FNN+LLDMY+KCGDL AI+VF KM +R VVSWTSMI+ YAREG D AI LFR M E
Sbjct: 335 SFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVRE 394
Query: 362 GIKPDLYTITSVLHACACNGLLKDGKDVHEYIINNSLQSNLFVANALMELYAKCGSMSDA 541
GI+PD+Y ITS+LHACAC+GLL+ GKDVH+YI N +QS+L+V+NALM++YAKCGSM+DA
Sbjct: 395 GIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADA 454
Query: 542 RLVFDQMPVRDVISWNTMIGGYSKNCLPNEALKLFMKMQLEFKPNSVTMSCILPACASLS 721
VF+QMPV+D++SWNTMIGGYSKN PNEAL LF+ M F+P+ VTM+CILPACASL+
Sbjct: 455 ESVFNQMPVKDIVSWNTMIGGYSKNSCPNEALDLFVAMLQNFEPDGVTMACILPACASLA 514
Query: 722 ALERGREVHASILRNGFSFDHYVSNALIDMY 814
ALERGRE+H ILR+G S D V+NA++DMY
Sbjct: 515 ALERGREIHGYILRHGISADRNVANAIVDMY 545
Score = 157 bits (396), Expect = 6e-36
Identities = 95/262 (36%), Positives = 139/262 (53%), Gaps = 1/262 (0%)
Frame = +2
Query: 35 FSQMRFREFEVDLATMVSVLPACAEMGMLLLGRAIHGHALKGRGFTGEVKFNNSLLDMYA 214
F +M+ D T VL A +G + G ++HG LK GF NSL+ Y
Sbjct: 186 FKKMQSLGIAADSYTFSCVLKCLAVVGNVKEGESVHGFMLK-LGFGCNNTVLNSLITYYF 244
Query: 215 KCGDLGSAIQVFGKMDKRCVVSWTSMISAYAREGHCDVAIELFREMEGEGIKPDLYTITS 394
K + A ++F ++ R VVSW MIS Y G + +E+F+EM G DL T+ +
Sbjct: 245 KSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVT 304
Query: 395 VLHACACNGLLKDGKDVHEYIINNSLQSNLFVANALMELYAKCGSMSDARLVFDQMPVRD 574
VL CA G L G+ VH + + + N L+++Y+KCG + A VF++M R
Sbjct: 305 VLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERS 364
Query: 575 VISWNTMIGGYSKNCLPNEALKLFMKMQLE-FKPNSVTMSCILPACASLSALERGREVHA 751
V+SW +MI GY++ + + A++LF M E +P+ ++ IL ACA LE G++VH
Sbjct: 365 VVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHD 424
Query: 752 SILRNGFSFDHYVSNALIDMYA 817
I N YVSNAL+DMYA
Sbjct: 425 YIKENDMQSSLYVSNALMDMYA 446
Score = 150 bits (380), Expect = 4e-34
Identities = 85/253 (33%), Positives = 136/253 (53%), Gaps = 1/253 (0%)
Frame = +2
Query: 62 EVDLATMVSVLPACAEMGMLLLGRAIHGHALKGRGFTGEVKFNNSLLDMYAKCGDLGSAI 241
++D T S+L CA++ L G+ +H + + + L+ M+ CGDL
Sbjct: 93 KIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGR 152
Query: 242 QVFGKMDKRCVVSWTSMISAYAREGHCDVAIELFREMEGEGIKPDLYTITSVLHACACNG 421
+VF K+D V W ++ Y++ G+ ++ LF++M+ GI D YT + VL A G
Sbjct: 153 RVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVG 212
Query: 422 LLKDGKDVHEYIINNSLQSNLFVANALMELYAKCGSMSDARLVFDQMPVRDVISWNTMIG 601
+K+G+ VH +++ N V N+L+ Y K + DA +FD++ RDV+SWN MI
Sbjct: 213 NVKEGESVHGFMLKLGFGCNNTVLNSLITYYFKSRRVKDAHKLFDELSDRDVVSWNCMIS 272
Query: 602 GYSKNCLPNEALKLFMKM-QLEFKPNSVTMSCILPACASLSALERGREVHASILRNGFSF 778
GY N + + L++F +M L F + TM +L CA+ AL GR VHA L+ FS
Sbjct: 273 GYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSK 332
Query: 779 DHYVSNALIDMYA 817
+ +N L+DMY+
Sbjct: 333 EISFNNTLLDMYS 345
Score = 150 bits (378), Expect = 7e-34
Identities = 81/244 (33%), Positives = 138/244 (56%), Gaps = 1/244 (0%)
Frame = +2
Query: 8 GLAEKGRETFSQMRFREFEVDLATMVSVLPACAEMGMLLLGRAIHGHALKGRGFTGEVKF 187
G+ + F M E D+ + S+L ACA G+L +G+ +H + +K +
Sbjct: 379 GVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDY-IKENDMQSSLYV 437
Query: 188 NNSLLDMYAKCGDLGSAIQVFGKMDKRCVVSWTSMISAYAREGHCDVAIELFREMEGEGI 367
+N+L+DMYAKCG + A VF +M + +VSW +MI Y++ + A++LF M +
Sbjct: 438 SNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIGGYSKNSCPNEALDLFVAML-QNF 496
Query: 368 KPDLYTITSVLHACACNGLLKDGKDVHEYIINNSLQSNLFVANALMELYAKCGSMSDARL 547
+PD T+ +L ACA L+ G+++H YI+ + + ++ VANA++++Y KCG + AR
Sbjct: 497 EPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARS 556
Query: 548 VFDQMPVRDVISWNTMIGGYSKNCLPNEALKLFMKM-QLEFKPNSVTMSCILPACASLSA 724
+FD +P +D+ISW MI GY + +A+ F M Q +P+ V+ +L AC+
Sbjct: 557 LFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGL 616
Query: 725 LERG 736
++ G
Sbjct: 617 VDEG 620
Score = 85.9 bits (211), Expect = 2e-14
Identities = 56/181 (30%), Positives = 92/181 (50%), Gaps = 2/181 (1%)
Frame = +2
Query: 278 SWTSMISAYAREGHCDVAIELFREMEGEGIKPDLYTITSVLHACACNGLLKDGKDVHEYI 457
++ + I + G+ + A+E+ E I D T S+L CA L+DGK VH I
Sbjct: 65 NYNAEIGRFCEVGNLEKAMEVLYSSEKSKI--DTKTYCSILQLCADLKSLEDGKKVHSII 122
Query: 458 INNSLQ-SNLFVANALMELYAKCGSMSDARLVFDQMPVRDVISWNTMIGGYSKNCLPNEA 634
+ + + + + L+ ++ CG + + R VF+++ V WN ++ YSK E+
Sbjct: 123 CESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKES 182
Query: 635 LKLFMKMQ-LEFKPNSVTMSCILPACASLSALERGREVHASILRNGFSFDHYVSNALIDM 811
L LF KMQ L +S T SC+L A + ++ G VH +L+ GF ++ V N+LI
Sbjct: 183 LYLFKKMQSLGIAADSYTFSCVLKCLAVVGNVKEGESVHGFMLKLGFGCNNTVLNSLITY 242
Query: 812 Y 814
Y
Sbjct: 243 Y 243
>ref|XP_004294643.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Fragaria vesca subsp. vesca]
Length = 870
Score = 351 bits (900), Expect = 2e-94
Identities = 164/271 (60%), Positives = 218/271 (80%)
Frame = +2
Query: 2 SNGLAEKGRETFSQMRFREFEVDLATMVSVLPACAEMGMLLLGRAIHGHALKGRGFTGEV 181
SNG EKG E F +M + +VDLAT+++VL AC++ G ++LGR +HG+A+KG GF +V
Sbjct: 274 SNGAPEKGIEIFREMVWSGIDVDLATIINVLMACSDCGNVVLGRVVHGYAMKG-GFDVDV 332
Query: 182 KFNNSLLDMYAKCGDLGSAIQVFGKMDKRCVVSWTSMISAYAREGHCDVAIELFREMEGE 361
NS+LDMY+KCGDL A++VF KM +R VVSWTSMI+ Y REG D AIELF EME +
Sbjct: 333 VLCNSVLDMYSKCGDLSDAVRVFEKMGRRSVVSWTSMIAGYVREGLSDKAIELFCEMETD 392
Query: 362 GIKPDLYTITSVLHACACNGLLKDGKDVHEYIINNSLQSNLFVANALMELYAKCGSMSDA 541
G+ PD+YTITS+LHACAC+G L+ GKD+H+YI + + S+LFV N+LM++YAKCGSM DA
Sbjct: 393 GVIPDVYTITSILHACACSGSLEKGKDIHKYIREHDMDSSLFVCNSLMDMYAKCGSMEDA 452
Query: 542 RLVFDQMPVRDVISWNTMIGGYSKNCLPNEALKLFMKMQLEFKPNSVTMSCILPACASLS 721
VF MP++D++SWNTMIGGYSKNCLPNEAL+LF MQ +FKP+S+T++ +LPACASL+
Sbjct: 453 DSVFSHMPMKDIVSWNTMIGGYSKNCLPNEALELFSDMQRKFKPDSMTLASVLPACASLA 512
Query: 722 ALERGREVHASILRNGFSFDHYVSNALIDMY 814
AL+RG+E+H +LR+G+ D YV+NAL+DMY
Sbjct: 513 ALDRGQEIHGYLLRHGYFLDQYVANALVDMY 543
Score = 169 bits (429), Expect = 9e-40
Identities = 97/253 (38%), Positives = 150/253 (59%), Gaps = 1/253 (0%)
Frame = +2
Query: 62 EVDLATMVSVLPACAEMGMLLLGRAIHGHALKGRGFTGEVKFNNSLLDMYAKCGDLGSAI 241
E++ T V A +G + G +HG+ K R F + NSL+ Y K G + SA
Sbjct: 193 ELNSYTFSCVFKCFAALGCVREGEWVHGYLYKLR-FGSDSNVVNSLMAFYFKNGRVESAR 251
Query: 242 QVFGKMDKRCVVSWTSMISAYAREGHCDVAIELFREMEGEGIKPDLYTITSVLHACACNG 421
+VF + +R VVSW SMISAY G + IE+FREM GI DL TI +VL AC+ G
Sbjct: 252 KVFDALRERDVVSWNSMISAYVSNGAPEKGIEIFREMVWSGIDVDLATIINVLMACSDCG 311
Query: 422 LLKDGKDVHEYIINNSLQSNLFVANALMELYAKCGSMSDARLVFDQMPVRDVISWNTMIG 601
+ G+ VH Y + ++ + N+++++Y+KCG +SDA VF++M R V+SW +MI
Sbjct: 312 NVVLGRVVHGYAMKGGFDVDVVLCNSVLDMYSKCGDLSDAVRVFEKMGRRSVVSWTSMIA 371
Query: 602 GYSKNCLPNEALKLFMKMQLE-FKPNSVTMSCILPACASLSALERGREVHASILRNGFSF 778
GY + L ++A++LF +M+ + P+ T++ IL ACA +LE+G+++H I +
Sbjct: 372 GYVREGLSDKAIELFCEMETDGVIPDVYTITSILHACACSGSLEKGKDIHKYIREHDMDS 431
Query: 779 DHYVSNALIDMYA 817
+V N+L+DMYA
Sbjct: 432 SLFVCNSLMDMYA 444
Score = 163 bits (412), Expect = 8e-38
Identities = 96/275 (34%), Positives = 157/275 (57%), Gaps = 5/275 (1%)
Frame = +2
Query: 8 GLAEKGRETFSQMRFREFEVDLATMVSVLPACAEMGMLLLGRAIHGHALKGRGFTGEVKF 187
GL++K E F +M D+ T+ S+L ACA G L G+ IH + ++ +
Sbjct: 377 GLSDKAIELFCEMETDGVIPDVYTITSILHACACSGSLEKGKDIHKY-IREHDMDSSLFV 435
Query: 188 NNSLLDMYAKCGDLGSAIQVFGKMDKRCVVSWTSMISAYAREGHCDVAIELFREMEGEGI 367
NSL+DMYAKCG + A VF M + +VSW +MI Y++ + A+ELF +M+ +
Sbjct: 436 CNSLMDMYAKCGSMEDADSVFSHMPMKDIVSWNTMIGGYSKNCLPNEALELFSDMQRK-F 494
Query: 368 KPDLYTITSVLHACACNGLLKDGKDVHEYIINNSLQSNLFVANALMELYAKCGSMSDARL 547
KPD T+ SVL ACA L G+++H Y++ + + +VANAL+++Y KCG + AR+
Sbjct: 495 KPDSMTLASVLPACASLAALDRGQEIHGYLLRHGYFLDQYVANALVDMYVKCGVLILARV 554
Query: 548 VFDQMPVRDVISWNTMIGGYSKNCLPNEALKLFMKM-QLEFKPNSVTMSCILPACASLSA 724
+F+ +PV+D+IS+ +I GY + EA+ F +M + E +P+S++ IL AC+
Sbjct: 555 LFEMIPVKDLISYTVIIAGYGMHGFGKEAIAAFNEMTKAEIEPDSISFISILYACSHSGL 614
Query: 725 LERGREVHASILRNGFS----FDHYVSNALIDMYA 817
++ G I+RN + +HY ++D+ A
Sbjct: 615 VQEGWRFF-DIMRNDYKIEPMLEHYA--CMVDLLA 646
Score = 134 bits (338), Expect = 3e-29
Identities = 84/257 (32%), Positives = 129/257 (50%), Gaps = 5/257 (1%)
Frame = +2
Query: 62 EVDLATMVSVLPACAEMGMLLLGRAIHG----HALKGRGFTGEVKFNNSLLDMYAKCGDL 229
++D A SVL CA L G+ +H H + G+ G L+ MY CGDL
Sbjct: 92 DLDSAAYCSVLELCAGNKSLKDGKRVHSVLCEHGVNVDGYVGA-----KLVFMYVHCGDL 146
Query: 230 GSAIQVFGKMDKRCVVSWTSMISAYAREGHCDVAIELFREMEGEGIKPDLYTITSVLHAC 409
A +VF + R V W MI+ YA+ + LF +M G++ + YT + V
Sbjct: 147 REARRVFDALSDRKVFLWNLMINEYAKVRDFREGVCLFGKMVECGVELNSYTFSCVFKCF 206
Query: 410 ACNGLLKDGKDVHEYIINNSLQSNLFVANALMELYAKCGSMSDARLVFDQMPVRDVISWN 589
A G +++G+ VH Y+ S+ V N+LM Y K G + AR VFD + RDV+SWN
Sbjct: 207 AALGCVREGEWVHGYLYKLRFGSDSNVVNSLMAFYFKNGRVESARKVFDALRERDVVSWN 266
Query: 590 TMIGGYSKNCLPNEALKLFMKMQLE-FKPNSVTMSCILPACASLSALERGREVHASILRN 766
+MI Y N P + +++F +M + T+ +L AC+ + GR VH ++
Sbjct: 267 SMISAYVSNGAPEKGIEIFREMVWSGIDVDLATIINVLMACSDCGNVVLGRVVHGYAMKG 326
Query: 767 GFSFDHYVSNALIDMYA 817
GF D + N+++DMY+
Sbjct: 327 GFDVDVVLCNSVLDMYS 343
>ref|XP_007214267.1| hypothetical protein PRUPE_ppa025121mg [Prunus persica]
gi|462410132|gb|EMJ15466.1| hypothetical protein
PRUPE_ppa025121mg [Prunus persica]
Length = 796
Score = 350 bits (897), Expect = 5e-94
Identities = 168/271 (61%), Positives = 212/271 (78%)
Frame = +2
Query: 2 SNGLAEKGRETFSQMRFREFEVDLATMVSVLPACAEMGMLLLGRAIHGHALKGRGFTGEV 181
+NGLAEKG E F QM +VDLAT+++VL AC++ G L LGRA+H +A+K ++
Sbjct: 200 ANGLAEKGVEIFRQMLSLGVDVDLATVINVLMACSDGGNLSLGRALHSYAIK-TCLDMDI 258
Query: 182 KFNNSLLDMYAKCGDLGSAIQVFGKMDKRCVVSWTSMISAYAREGHCDVAIELFREMEGE 361
F N++LDMY+KCGDL SA QVFGKM +R VVSWTSMI+ Y REG D AIELF EME
Sbjct: 259 MFYNNVLDMYSKCGDLSSATQVFGKMGQRSVVSWTSMIAGYVREGLSDEAIELFSEMERN 318
Query: 362 GIKPDLYTITSVLHACACNGLLKDGKDVHEYIINNSLQSNLFVANALMELYAKCGSMSDA 541
+ PD+YTITS+LHACACNG LK G+D+H+YI + + S+LFV N LM++YAKCGSM DA
Sbjct: 319 DVSPDVYTITSILHACACNGSLKKGRDIHKYIREHGMDSSLFVCNTLMDMYAKCGSMEDA 378
Query: 542 RLVFDQMPVRDVISWNTMIGGYSKNCLPNEALKLFMKMQLEFKPNSVTMSCILPACASLS 721
VF MPV+D++SWNTMIGGYSKNCLPNEALKLF +MQ + KP+ +T++ +LPACASL+
Sbjct: 379 HSVFSSMPVKDIVSWNTMIGGYSKNCLPNEALKLFSEMQQKSKPDGMTIASVLPACASLA 438
Query: 722 ALERGREVHASILRNGFSFDHYVSNALIDMY 814
AL RG+E+H ILRNG+ D YV+NAL+DMY
Sbjct: 439 ALNRGQEIHGHILRNGYFSDRYVANALVDMY 469
Score = 176 bits (445), Expect = 1e-41
Identities = 102/275 (37%), Positives = 161/275 (58%), Gaps = 5/275 (1%)
Frame = +2
Query: 8 GLAEKGRETFSQMRFREFEVDLATMVSVLPACAEMGMLLLGRAIHGHALKGRGFTGEVKF 187
GL+++ E FS+M + D+ T+ S+L ACA G L GR IH + ++ G +
Sbjct: 303 GLSDEAIELFSEMERNDVSPDVYTITSILHACACNGSLKKGRDIHKY-IREHGMDSSLFV 361
Query: 188 NNSLLDMYAKCGDLGSAIQVFGKMDKRCVVSWTSMISAYAREGHCDVAIELFREMEGEGI 367
N+L+DMYAKCG + A VF M + +VSW +MI Y++ + A++LF EM+ +
Sbjct: 362 CNTLMDMYAKCGSMEDAHSVFSSMPVKDIVSWNTMIGGYSKNCLPNEALKLFSEMQQKS- 420
Query: 368 KPDLYTITSVLHACACNGLLKDGKDVHEYIINNSLQSNLFVANALMELYAKCGSMSDARL 547
KPD TI SVL ACA L G+++H +I+ N S+ +VANAL+++Y KCG + ARL
Sbjct: 421 KPDGMTIASVLPACASLAALNRGQEIHGHILRNGYFSDRYVANALVDMYVKCGVLVLARL 480
Query: 548 VFDQMPVRDVISWNTMIGGYSKNCLPNEALKLFMKMQLE-FKPNSVTMSCILPACASLSA 724
+FD +P++D+ISW ++ GY + +EA+ F +M+ KP+S++ IL AC+
Sbjct: 481 LFDIIPIKDLISWTVIVAGYGMHGFGSEAITAFNEMRKSGIKPDSISFISILYACSHSGL 540
Query: 725 LERGREVHASILRNGFS----FDHYVSNALIDMYA 817
L+ S +RN +S +HY ++D+ A
Sbjct: 541 LDEAWRFFDS-MRNDYSIVPKLEHYA--CMVDLLA 572
Score = 173 bits (439), Expect = 6e-41
Identities = 95/267 (35%), Positives = 152/267 (56%), Gaps = 1/267 (0%)
Frame = +2
Query: 20 KGRETFSQMRFREFEVDLATMVSVLPACAEMGMLLLGRAIHGHALKGRGFTGEVKFNNSL 199
+G F +M+ + + T +L + +G + G +HG+ K GF + NSL
Sbjct: 105 EGIHLFRKMQELGIQANSYTFSCILKCFSSLGYVREGEWVHGYLYK-LGFGSDNTVGNSL 163
Query: 200 LDMYAKCGDLGSAIQVFGKMDKRCVVSWTSMISAYAREGHCDVAIELFREMEGEGIKPDL 379
+ Y K + SA +VF ++ R V+SW SMISAY G + +E+FR+M G+ DL
Sbjct: 164 MAFYFKNRIIESARKVFDELSDRDVISWNSMISAYVANGLAEKGVEIFRQMLSLGVDVDL 223
Query: 380 YTITSVLHACACNGLLKDGKDVHEYIINNSLQSNLFVANALMELYAKCGSMSDARLVFDQ 559
T+ +VL AC+ G L G+ +H Y I L ++ N ++++Y+KCG +S A VF +
Sbjct: 224 ATVINVLMACSDGGNLSLGRALHSYAIKTCLDMDIMFYNNVLDMYSKCGDLSSATQVFGK 283
Query: 560 MPVRDVISWNTMIGGYSKNCLPNEALKLFMKMQL-EFKPNSVTMSCILPACASLSALERG 736
M R V+SW +MI GY + L +EA++LF +M+ + P+ T++ IL ACA +L++G
Sbjct: 284 MGQRSVVSWTSMIAGYVREGLSDEAIELFSEMERNDVSPDVYTITSILHACACNGSLKKG 343
Query: 737 REVHASILRNGFSFDHYVSNALIDMYA 817
R++H I +G +V N L+DMYA
Sbjct: 344 RDIHKYIREHGMDSSLFVCNTLMDMYA 370
Score = 135 bits (340), Expect = 2e-29
Identities = 84/253 (33%), Positives = 131/253 (51%), Gaps = 1/253 (0%)
Frame = +2
Query: 62 EVDLATMVSVLPACAEMGMLLLGRAIHGHALKGRGFTGEVKFNNSLLDMYAKCGDLGSAI 241
E+DL SVL CA + L G+ +H + G + L+ M+ KCGDL A
Sbjct: 18 ELDLEGYCSVLELCAGLKSLQDGKRVHS-VICNNGAEVDGPLGAKLVFMFVKCGDLREAR 76
Query: 242 QVFGKMDKRCVVSWTSMISAYAREGHCDVAIELFREMEGEGIKPDLYTITSVLHACACNG 421
+VF K+ V W MI+ YA+ + I LFR+M+ GI+ + YT + +L + G
Sbjct: 77 RVFDKLSNGKVFLWNLMINEYAKVRNFREGIHLFRKMQELGIQANSYTFSCILKCFSSLG 136
Query: 422 LLKDGKDVHEYIINNSLQSNLFVANALMELYAKCGSMSDARLVFDQMPVRDVISWNTMIG 601
+++G+ VH Y+ S+ V N+LM Y K + AR VFD++ RDVISWN+MI
Sbjct: 137 YVREGEWVHGYLYKLGFGSDNTVGNSLMAFYFKNRIIESARKVFDELSDRDVISWNSMIS 196
Query: 602 GYSKNCLPNEALKLFMKM-QLEFKPNSVTMSCILPACASLSALERGREVHASILRNGFSF 778
Y N L + +++F +M L + T+ +L AC+ L GR +H+ ++
Sbjct: 197 AYVANGLAEKGVEIFRQMLSLGVDVDLATVINVLMACSDGGNLSLGRALHSYAIKTCLDM 256
Query: 779 DHYVSNALIDMYA 817
D N ++DMY+
Sbjct: 257 DIMFYNNVLDMYS 269
>gb|EXB84044.1| hypothetical protein L484_005808 [Morus notabilis]
Length = 877
Score = 348 bits (892), Expect = 2e-93
Identities = 168/271 (61%), Positives = 212/271 (78%)
Frame = +2
Query: 2 SNGLAEKGRETFSQMRFREFEVDLATMVSVLPACAEMGMLLLGRAIHGHALKGRGFTGEV 181
SNGL EKG F +M VDLAT+V+ L ACA +G LLGRA+H +A+K F GE+
Sbjct: 282 SNGLGEKGVGIFGKMLSLGVNVDLATIVNALVACANIGTHLLGRAVHAYAIKAC-FDGEI 340
Query: 182 KFNNSLLDMYAKCGDLGSAIQVFGKMDKRCVVSWTSMISAYAREGHCDVAIELFREMEGE 361
F N+LLDMY+KCG+L +A+QVF K +R VVSWTSMI+ YAREG + AI LF EME
Sbjct: 341 MFRNTLLDMYSKCGELDAAVQVFEKTGERSVVSWTSMIAGYAREGRSNEAIRLFYEMERN 400
Query: 362 GIKPDLYTITSVLHACACNGLLKDGKDVHEYIINNSLQSNLFVANALMELYAKCGSMSDA 541
G+ PD++TITS+LHACAC+G L+DGKDVH YI + ++SNLFV NALM++Y+KCGSM DA
Sbjct: 401 GVSPDIFTITSILHACACSGSLEDGKDVHNYIRESGMESNLFVCNALMDMYSKCGSMDDA 460
Query: 542 RLVFDQMPVRDVISWNTMIGGYSKNCLPNEALKLFMKMQLEFKPNSVTMSCILPACASLS 721
LVF +MP +D+ISWNTMIGGYSKN LPNEALKLF +MQ + K +S+T +CILPACASL+
Sbjct: 461 NLVFSRMPAKDIISWNTMIGGYSKNRLPNEALKLFAEMQGKSKADSITAACILPACASLA 520
Query: 722 ALERGREVHASILRNGFSFDHYVSNALIDMY 814
AL +GRE+H +LRNG+ D +V+NAL+DMY
Sbjct: 521 ALAKGREIHGHVLRNGYFQDRHVANALVDMY 551
Score = 158 bits (399), Expect = 3e-36
Identities = 92/264 (34%), Positives = 151/264 (57%), Gaps = 6/264 (2%)
Frame = +2
Query: 8 GLAEKGRETFSQMRFREFE-----VDLATMVSVLPACAEMGMLLLGRAIHGHALKGRGFT 172
G A +GR + F E E D+ T+ S+L ACA G L G+ +H + ++ G
Sbjct: 380 GYAREGRSNEAIRLFYEMERNGVSPDIFTITSILHACACSGSLEDGKDVHNY-IRESGME 438
Query: 173 GEVKFNNSLLDMYAKCGDLGSAIQVFGKMDKRCVVSWTSMISAYAREGHCDVAIELFREM 352
+ N+L+DMY+KCG + A VF +M + ++SW +MI Y++ + A++LF EM
Sbjct: 439 SNLFVCNALMDMYSKCGSMDDANLVFSRMPAKDIISWNTMIGGYSKNRLPNEALKLFAEM 498
Query: 353 EGEGIKPDLYTITSVLHACACNGLLKDGKDVHEYIINNSLQSNLFVANALMELYAKCGSM 532
+G+ K D T +L ACA L G+++H +++ N + VANAL+++Y KCG +
Sbjct: 499 QGKS-KADSITAACILPACASLAALAKGREIHGHVLRNGYFQDRHVANALVDMYVKCGLL 557
Query: 533 SDARLVFDQMPVRDVISWNTMIGGYSKNCLPNEALKLFMKMQ-LEFKPNSVTMSCILPAC 709
+ A+++FD +PV+D+ISW MI GY + EA+ F +M+ +P+ V+ IL AC
Sbjct: 558 ALAQVLFDMIPVKDLISWTVMIAGYGMHGFGREAIAAFDEMRHAGIEPDEVSFISILYAC 617
Query: 710 ASLSALERGREVHASILRNGFSFD 781
S S L+ G +++RN +S +
Sbjct: 618 -SHSGLDEGWSFF-NVMRNEYSIE 639
Score = 157 bits (397), Expect = 4e-36
Identities = 94/262 (35%), Positives = 142/262 (54%), Gaps = 1/262 (0%)
Frame = +2
Query: 35 FSQMRFREFEVDLATMVSVLPACAEMGMLLLGRAIHGHALKGRGFTGEVKFNNSLLDMYA 214
F +M+ + + T+ VL +G L G IH + K GF NSL+ Y
Sbjct: 192 FKKMQELGIQANSHTLSCVLKCFGALGNLKEGERIHAYLYK-LGFGCYNTVLNSLVAFYF 250
Query: 215 KCGDLGSAIQVFGKMDKRCVVSWTSMISAYAREGHCDVAIELFREMEGEGIKPDLYTITS 394
K G + SA +VF ++ R V+SW SMIS Y+ G + + +F +M G+ DL TI +
Sbjct: 251 KSGRVESAQKVFDELTDRDVISWNSMISGYSSNGLGEKGVGIFGKMLSLGVNVDLATIVN 310
Query: 395 VLHACACNGLLKDGKDVHEYIINNSLQSNLFVANALMELYAKCGSMSDARLVFDQMPVRD 574
L ACA G G+ VH Y I + N L+++Y+KCG + A VF++ R
Sbjct: 311 ALVACANIGTHLLGRAVHAYAIKACFDGEIMFRNTLLDMYSKCGELDAAVQVFEKTGERS 370
Query: 575 VISWNTMIGGYSKNCLPNEALKLFMKMQLE-FKPNSVTMSCILPACASLSALERGREVHA 751
V+SW +MI GY++ NEA++LF +M+ P+ T++ IL ACA +LE G++VH
Sbjct: 371 VVSWTSMIAGYAREGRSNEAIRLFYEMERNGVSPDIFTITSILHACACSGSLEDGKDVHN 430
Query: 752 SILRNGFSFDHYVSNALIDMYA 817
I +G + +V NAL+DMY+
Sbjct: 431 YIRESGMESNLFVCNALMDMYS 452
Score = 135 bits (340), Expect = 2e-29
Identities = 83/253 (32%), Positives = 132/253 (52%), Gaps = 1/253 (0%)
Frame = +2
Query: 62 EVDLATMVSVLPACAEMGMLLLGRAIHGHALKGRGFTGEVKFNNSLLDMYAKCGDLGSAI 241
E++ T SVL CA+ L G+ +H ++ G + L+ MY CGDL A
Sbjct: 100 ELESRTYCSVLELCAQRKSLRDGKRVHS-VIRDSGVEVDGYLGEKLVFMYVNCGDLREAR 158
Query: 242 QVFGKMDKRCVVSWTSMISAYAREGHCDVAIELFREMEGEGIKPDLYTITSVLHACACNG 421
++F + V W +I+ YA+ + ++ LF++M+ GI+ + +T++ VL G
Sbjct: 159 RIFDNIYTDRVFVWNLVINEYAKIRNFRESVSLFKKMQELGIQANSHTLSCVLKCFGALG 218
Query: 422 LLKDGKDVHEYIINNSLQSNLFVANALMELYAKCGSMSDARLVFDQMPVRDVISWNTMIG 601
LK+G+ +H Y+ V N+L+ Y K G + A+ VFD++ RDVISWN+MI
Sbjct: 219 NLKEGERIHAYLYKLGFGCYNTVLNSLVAFYFKSGRVESAQKVFDELTDRDVISWNSMIS 278
Query: 602 GYSKNCLPNEALKLFMKM-QLEFKPNSVTMSCILPACASLSALERGREVHASILRNGFSF 778
GYS N L + + +F KM L + T+ L ACA++ GR VHA ++ F
Sbjct: 279 GYSSNGLGEKGVGIFGKMLSLGVNVDLATIVNALVACANIGTHLLGRAVHAYAIKACFDG 338
Query: 779 DHYVSNALIDMYA 817
+ N L+DMY+
Sbjct: 339 EIMFRNTLLDMYS 351
>ref|XP_002305733.2| hypothetical protein POPTR_0004s05810g, partial [Populus
trichocarpa] gi|550340410|gb|EEE86244.2| hypothetical
protein POPTR_0004s05810g, partial [Populus trichocarpa]
Length = 778
Score = 342 bits (876), Expect = 1e-91
Identities = 169/271 (62%), Positives = 207/271 (76%)
Frame = +2
Query: 2 SNGLAEKGRETFSQMRFREFEVDLATMVSVLPACAEMGMLLLGRAIHGHALKGRGFTGEV 181
+NG +EKG E F +M + ++DLATMVS+L ACA G + LGRA+HG +K +
Sbjct: 182 ANGFSEKGVELFKKMLYLGVDMDLATMVSILQACANCGDVSLGRAVHGSGVKAC-VHWKT 240
Query: 182 KFNNSLLDMYAKCGDLGSAIQVFGKMDKRCVVSWTSMISAYAREGHCDVAIELFREMEGE 361
F N+LLDMYAKCG L AI VF M R VV+WTS+I+AYAREG D AI LF EM+ E
Sbjct: 241 TFCNTLLDMYAKCGVLDGAILVFDLMSVRTVVTWTSLIAAYAREGLSDEAIRLFHEMDRE 300
Query: 362 GIKPDLYTITSVLHACACNGLLKDGKDVHEYIINNSLQSNLFVANALMELYAKCGSMSDA 541
G+ PD++TIT+VLHACACNG L++GKDVH YI N +QSN+FV NALM++YAKCGSM DA
Sbjct: 301 GVSPDIFTITTVLHACACNGSLENGKDVHNYIRENDMQSNIFVCNALMDMYAKCGSMEDA 360
Query: 542 RLVFDQMPVRDVISWNTMIGGYSKNCLPNEALKLFMKMQLEFKPNSVTMSCILPACASLS 721
VF +MPV+D+ISWNTMIGGYSKN LPNEAL LF M LE KP+ T++CILPACASL+
Sbjct: 361 NSVFLEMPVKDIISWNTMIGGYSKNSLPNEALSLFGDMVLEMKPDGTTLACILPACASLA 420
Query: 722 ALERGREVHASILRNGFSFDHYVSNALIDMY 814
+L+RG+EVH ILRNGF D V+NAL+DMY
Sbjct: 421 SLDRGKEVHGHILRNGFFSDQQVANALVDMY 451
Score = 163 bits (412), Expect = 8e-38
Identities = 99/263 (37%), Positives = 147/263 (55%), Gaps = 2/263 (0%)
Frame = +2
Query: 35 FSQMRFREFEVDLATMVSVLPACAEMGMLLLGRAIHGHALK-GRGFTGEVKFNNSLLDMY 211
F QM EV+ T+ VL A +G + G+ +HG LK G G V NSL+ Y
Sbjct: 92 FRQMLDLGVEVNSHTVSCVLKCFAALGSVKEGKWVHGFLLKLGLGSYNAVV--NSLIAFY 149
Query: 212 AKCGDLGSAIQVFGKMDKRCVVSWTSMISAYAREGHCDVAIELFREMEGEGIKPDLYTIT 391
K + A ++F ++ R V+SW SMIS Y G + +ELF++M G+ DL T+
Sbjct: 150 LKIRRVDVARKLFDELSNRDVISWNSMISGYVANGFSEKGVELFKKMLYLGVDMDLATMV 209
Query: 392 SVLHACACNGLLKDGKDVHEYIINNSLQSNLFVANALMELYAKCGSMSDARLVFDQMPVR 571
S+L ACA G + G+ VH + + N L+++YAKCG + A LVFD M VR
Sbjct: 210 SILQACANCGDVSLGRAVHGSGVKACVHWKTTFCNTLLDMYAKCGVLDGAILVFDLMSVR 269
Query: 572 DVISWNTMIGGYSKNCLPNEALKLFMKMQLE-FKPNSVTMSCILPACASLSALERGREVH 748
V++W ++I Y++ L +EA++LF +M E P+ T++ +L ACA +LE G++VH
Sbjct: 270 TVVTWTSLIAAYAREGLSDEAIRLFHEMDREGVSPDIFTITTVLHACACNGSLENGKDVH 329
Query: 749 ASILRNGFSFDHYVSNALIDMYA 817
I N + +V NAL+DMYA
Sbjct: 330 NYIRENDMQSNIFVCNALMDMYA 352
Score = 155 bits (392), Expect = 2e-35
Identities = 89/244 (36%), Positives = 138/244 (56%), Gaps = 1/244 (0%)
Frame = +2
Query: 8 GLAEKGRETFSQMRFREFEVDLATMVSVLPACAEMGMLLLGRAIHGHALKGRGFTGEVKF 187
GL+++ F +M D+ T+ +VL ACA G L G+ +H + ++ +
Sbjct: 285 GLSDEAIRLFHEMDREGVSPDIFTITTVLHACACNGSLENGKDVHNY-IRENDMQSNIFV 343
Query: 188 NNSLLDMYAKCGDLGSAIQVFGKMDKRCVVSWTSMISAYAREGHCDVAIELFREMEGEGI 367
N+L+DMYAKCG + A VF +M + ++SW +MI Y++ + A+ LF +M E +
Sbjct: 344 CNALMDMYAKCGSMEDANSVFLEMPVKDIISWNTMIGGYSKNSLPNEALSLFGDMVLE-M 402
Query: 368 KPDLYTITSVLHACACNGLLKDGKDVHEYIINNSLQSNLFVANALMELYAKCGSMSDARL 547
KPD T+ +L ACA L GK+VH +I+ N S+ VANAL+++Y KCG ARL
Sbjct: 403 KPDGTTLACILPACASLASLDRGKEVHGHILRNGFFSDQQVANALVDMYVKCGVPVLARL 462
Query: 548 VFDQMPVRDVISWNTMIGGYSKNCLPNEALKLFMKM-QLEFKPNSVTMSCILPACASLSA 724
+FD +P +D+I+W MI GY + N A+ F +M Q +P+ V+ IL AC+
Sbjct: 463 LFDMIPTKDLITWTVMIAGYGMHGFGNNAITTFNEMRQAGIEPDEVSFISILYACSHSGL 522
Query: 725 LERG 736
L+ G
Sbjct: 523 LDEG 526
Score = 136 bits (343), Expect = 8e-30
Identities = 84/252 (33%), Positives = 130/252 (51%), Gaps = 1/252 (0%)
Frame = +2
Query: 65 VDLATMVSVLPACAEMGMLLLGRAIHGHALKGRGFTGEVKFNNSLLDMYAKCGDLGSAIQ 244
++ T S+L AE+ L G+ +H G + + + L+ MY CGDL
Sbjct: 1 IESRTCCSILQLSAELKSLQDGKKVHSFICSS-GISIDSVLGSKLVFMYVTCGDLREGRL 59
Query: 245 VFGKMDKRCVVSWTSMISAYAREGHCDVAIELFREMEGEGIKPDLYTITSVLHACACNGL 424
+F K+ V W M++ Y + G ++ LFR+M G++ + +T++ VL A G
Sbjct: 60 IFDKIRNEKVFLWNLMMNGYTKIGDFKESVSLFRQMLDLGVEVNSHTVSCVLKCFAALGS 119
Query: 425 LKDGKDVHEYIINNSLQSNLFVANALMELYAKCGSMSDARLVFDQMPVRDVISWNTMIGG 604
+K+GK VH +++ L S V N+L+ Y K + AR +FD++ RDVISWN+MI G
Sbjct: 120 VKEGKWVHGFLLKLGLGSYNAVVNSLIAFYLKIRRVDVARKLFDELSNRDVISWNSMISG 179
Query: 605 YSKNCLPNEALKLFMKM-QLEFKPNSVTMSCILPACASLSALERGREVHASILRNGFSFD 781
Y N + ++LF KM L + TM IL ACA+ + GR VH S ++ +
Sbjct: 180 YVANGFSEKGVELFKKMLYLGVDMDLATMVSILQACANCGDVSLGRAVHGSGVKACVHWK 239
Query: 782 HYVSNALIDMYA 817
N L+DMYA
Sbjct: 240 TTFCNTLLDMYA 251
>ref|XP_007025334.1| Pentatricopeptide, putative [Theobroma cacao]
gi|508780700|gb|EOY27956.1| Pentatricopeptide, putative
[Theobroma cacao]
Length = 874
Score = 341 bits (875), Expect = 2e-91
Identities = 166/271 (61%), Positives = 212/271 (78%)
Frame = +2
Query: 2 SNGLAEKGRETFSQMRFREFEVDLATMVSVLPACAEMGMLLLGRAIHGHALKGRGFTGEV 181
SNGLAEKG E F +M + +VDLAT+V+VL CA G L LG+A+H A+K F ++
Sbjct: 278 SNGLAEKGLEVFKEMLYLGIDVDLATIVTVLVGCANSGTLSLGKAVHALAIKAC-FERKL 336
Query: 182 KFNNSLLDMYAKCGDLGSAIQVFGKMDKRCVVSWTSMISAYAREGHCDVAIELFREMEGE 361
FNN+LLDMY+KCGDL A++VF KM +R VVSWTSMI+ Y R+G D AI L ++ME E
Sbjct: 337 NFNNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGQSDGAIRLLQQMERE 396
Query: 362 GIKPDLYTITSVLHACACNGLLKDGKDVHEYIINNSLQSNLFVANALMELYAKCGSMSDA 541
G+K D+ ITSVLHACA +G L++GKDVH+YI N+++SNLFV NALM++YAKCGSM DA
Sbjct: 397 GVKLDVVAITSVLHACARSGSLENGKDVHDYIKANNVESNLFVCNALMDMYAKCGSMEDA 456
Query: 542 RLVFDQMPVRDVISWNTMIGGYSKNCLPNEALKLFMKMQLEFKPNSVTMSCILPACASLS 721
+F +M V+D+ISWNTMIGGYSKNCLPNEALK+ M E KP+S T++CILPACASL+
Sbjct: 457 NSIFSRMAVKDIISWNTMIGGYSKNCLPNEALKMLAAMLKELKPDSRTLACILPACASLA 516
Query: 722 ALERGREVHASILRNGFSFDHYVSNALIDMY 814
ALERG+E+H ILRNG+ D +V+NAL+D+Y
Sbjct: 517 ALERGKEIHGHILRNGYFSDRHVANALVDLY 547
Score = 167 bits (424), Expect = 3e-39
Identities = 100/262 (38%), Positives = 146/262 (55%), Gaps = 1/262 (0%)
Frame = +2
Query: 35 FSQMRFREFEVDLATMVSVLPACAEMGMLLLGRAIHGHALKGRGFTGEVKFNNSLLDMYA 214
F M + EVD T +L A G L G +HG+ LK GF NSL+ Y
Sbjct: 188 FKMMMKKGIEVDSYTFSCILKCLAASGGLKEGERVHGYLLK-LGFGSYNSVVNSLITFYF 246
Query: 215 KCGDLGSAIQVFGKMDKRCVVSWTSMISAYAREGHCDVAIELFREMEGEGIKPDLYTITS 394
K + SA ++F ++ R V+SW SMIS Y G + +E+F+EM GI DL TI +
Sbjct: 247 KGKRVESASELFDELIDRDVISWNSMISGYVSNGLAEKGLEVFKEMLYLGIDVDLATIVT 306
Query: 395 VLHACACNGLLKDGKDVHEYIINNSLQSNLFVANALMELYAKCGSMSDARLVFDQMPVRD 574
VL CA +G L GK VH I + L N L+++Y+KCG + A VF++M R+
Sbjct: 307 VLVGCANSGTLSLGKAVHALAIKACFERKLNFNNTLLDMYSKCGDLDGALRVFEKMGERN 366
Query: 575 VISWNTMIGGYSKNCLPNEALKLFMKMQLE-FKPNSVTMSCILPACASLSALERGREVHA 751
V+SW +MI GY+++ + A++L +M+ E K + V ++ +L ACA +LE G++VH
Sbjct: 367 VVSWTSMIAGYTRDGQSDGAIRLLQQMEREGVKLDVVAITSVLHACARSGSLENGKDVHD 426
Query: 752 SILRNGFSFDHYVSNALIDMYA 817
I N + +V NAL+DMYA
Sbjct: 427 YIKANNVESNLFVCNALMDMYA 448
Score = 159 bits (401), Expect = 2e-36
Identities = 89/260 (34%), Positives = 146/260 (56%), Gaps = 1/260 (0%)
Frame = +2
Query: 5 NGLAEKGRETFSQMRFREFEVDLATMVSVLPACAEMGMLLLGRAIHGHALKGRGFTGEVK 184
+G ++ QM ++D+ + SVL ACA G L G+ +H + +K +
Sbjct: 380 DGQSDGAIRLLQQMEREGVKLDVVAITSVLHACARSGSLENGKDVHDY-IKANNVESNLF 438
Query: 185 FNNSLLDMYAKCGDLGSAIQVFGKMDKRCVVSWTSMISAYAREGHCDVAIELFREMEGEG 364
N+L+DMYAKCG + A +F +M + ++SW +MI Y++ + A+++ M E
Sbjct: 439 VCNALMDMYAKCGSMEDANSIFSRMAVKDIISWNTMIGGYSKNCLPNEALKMLAAMLKE- 497
Query: 365 IKPDLYTITSVLHACACNGLLKDGKDVHEYIINNSLQSNLFVANALMELYAKCGSMSDAR 544
+KPD T+ +L ACA L+ GK++H +I+ N S+ VANAL++LY KCG ++ AR
Sbjct: 498 LKPDSRTLACILPACASLAALERGKEIHGHILRNGYFSDRHVANALVDLYVKCGVLALAR 557
Query: 545 LVFDQMPVRDVISWNTMIGGYSKNCLPNEALKLFMKMQ-LEFKPNSVTMSCILPACASLS 721
L+FD + +D++SW MI GY + NEA+ F +M+ +P+ V+ IL AC+
Sbjct: 558 LLFDMISSKDLVSWTVMIAGYGMHGFANEAITTFNEMRDAGIEPDEVSFISILYACSHSG 617
Query: 722 ALERGREVHASILRNGFSFD 781
LE G I+RN ++ +
Sbjct: 618 LLEEGWRFF-YIMRNDYNIE 636
Score = 144 bits (364), Expect = 3e-32
Identities = 84/253 (33%), Positives = 134/253 (52%), Gaps = 1/253 (0%)
Frame = +2
Query: 62 EVDLATMVSVLPACAEMGMLLLGRAIHGHALKGRGFTGEVKFNNSLLDMYAKCGDLGSAI 241
E++ T S+L CA++ L G+ +H + G + + L+ Y CGDL
Sbjct: 96 ELESKTYCSILQLCADLKSLKDGKKVHS-IINSNGVAVDEVLGSKLVSFYVTCGDLKEGR 154
Query: 242 QVFGKMDKRCVVSWTSMISAYAREGHCDVAIELFREMEGEGIKPDLYTITSVLHACACNG 421
+F +M+K+ V W M++ YA+ G +I LF+ M +GI+ D YT + +L A +G
Sbjct: 155 GIFDEMEKKKVFLWNYMLNEYAKFGDFKESIYLFKMMMKKGIEVDSYTFSCILKCLAASG 214
Query: 422 LLKDGKDVHEYIINNSLQSNLFVANALMELYAKCGSMSDARLVFDQMPVRDVISWNTMIG 601
LK+G+ VH Y++ S V N+L+ Y K + A +FD++ RDVISWN+MI
Sbjct: 215 GLKEGERVHGYLLKLGFGSYNSVVNSLITFYFKGKRVESASELFDELIDRDVISWNSMIS 274
Query: 602 GYSKNCLPNEALKLFMKM-QLEFKPNSVTMSCILPACASLSALERGREVHASILRNGFSF 778
GY N L + L++F +M L + T+ +L CA+ L G+ VHA ++ F
Sbjct: 275 GYVSNGLAEKGLEVFKEMLYLGIDVDLATIVTVLVGCANSGTLSLGKAVHALAIKACFER 334
Query: 779 DHYVSNALIDMYA 817
+N L+DMY+
Sbjct: 335 KLNFNNTLLDMYS 347
>ref|XP_004150218.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Cucumis sativus]
gi|449500809|ref|XP_004161200.1| PREDICTED:
pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Cucumis sativus]
Length = 926
Score = 336 bits (861), Expect = 7e-90
Identities = 161/270 (59%), Positives = 209/270 (77%)
Frame = +2
Query: 5 NGLAEKGRETFSQMRFREFEVDLATMVSVLPACAEMGMLLLGRAIHGHALKGRGFTGEVK 184
NGL ++G E F +M ++DLATMV+V ACA +G LLLG+ +H +++K EV+
Sbjct: 330 NGLDDRGIEIFIKMLVFGVDIDLATMVNVFVACANIGTLLLGKVLHSYSIKAATLDREVR 389
Query: 185 FNNSLLDMYAKCGDLGSAIQVFGKMDKRCVVSWTSMISAYAREGHCDVAIELFREMEGEG 364
FNN+LLDMY+KCGDL SAI+VF +MD++ VVSWTSMI+ Y REG D AI+LF EM+ G
Sbjct: 390 FNNTLLDMYSKCGDLNSAIRVFERMDEKTVVSWTSMITGYVREGLSDGAIKLFDEMKSRG 449
Query: 365 IKPDLYTITSVLHACACNGLLKDGKDVHEYIINNSLQSNLFVANALMELYAKCGSMSDAR 544
+ PD+Y +TS+L+ACA NG LK GK VH+YI N+L++N FV+NAL ++YAKCGSM DA
Sbjct: 450 VVPDVYAVTSILNACAINGNLKSGKIVHDYIRENNLETNSFVSNALTDMYAKCGSMKDAH 509
Query: 545 LVFDQMPVRDVISWNTMIGGYSKNCLPNEALKLFMKMQLEFKPNSVTMSCILPACASLSA 724
VF M +DVISWNTMIGGY+KN LPNEAL LF +MQ E KP+ T++CILPACASL+A
Sbjct: 510 DVFSHMKKKDVISWNTMIGGYTKNSLPNEALTLFAEMQRESKPDGTTVACILPACASLAA 569
Query: 725 LERGREVHASILRNGFSFDHYVSNALIDMY 814
L++GRE+H LRNG+S D YV+NA++DMY
Sbjct: 570 LDKGREIHGYALRNGYSEDKYVTNAVVDMY 599
Score = 160 bits (404), Expect = 7e-37
Identities = 86/247 (34%), Positives = 139/247 (56%), Gaps = 1/247 (0%)
Frame = +2
Query: 8 GLAEKGRETFSQMRFREFEVDLATMVSVLPACAEMGMLLLGRAIHGHALKGRGFTGEVKF 187
GL++ + F +M+ R D+ + S+L ACA G L G+ +H + + T
Sbjct: 433 GLSDGAIKLFDEMKSRGVVPDVYAVTSILNACAINGNLKSGKIVHDYIRENNLETNSF-V 491
Query: 188 NNSLLDMYAKCGDLGSAIQVFGKMDKRCVVSWTSMISAYAREGHCDVAIELFREMEGEGI 367
+N+L DMYAKCG + A VF M K+ V+SW +MI Y + + A+ LF EM+ E
Sbjct: 492 SNALTDMYAKCGSMKDAHDVFSHMKKKDVISWNTMIGGYTKNSLPNEALTLFAEMQRES- 550
Query: 368 KPDLYTITSVLHACACNGLLKDGKDVHEYIINNSLQSNLFVANALMELYAKCGSMSDARL 547
KPD T+ +L ACA L G+++H Y + N + +V NA++++Y KCG + AR
Sbjct: 551 KPDGTTVACILPACASLAALDKGREIHGYALRNGYSEDKYVTNAVVDMYVKCGLLVLARS 610
Query: 548 VFDQMPVRDVISWNTMIGGYSKNCLPNEALKLFMKMQLE-FKPNSVTMSCILPACASLSA 724
+FD +P +D++SW MI GY + +EA+ F +M++ +P+ V+ IL AC+
Sbjct: 611 LFDMIPNKDLVSWTVMIAGYGMHGYGSEAINTFNQMRMTGIEPDEVSFISILYACSHSGL 670
Query: 725 LERGREV 745
L+ G ++
Sbjct: 671 LDEGWKI 677
Score = 143 bits (360), Expect = 9e-32
Identities = 95/263 (36%), Positives = 140/263 (53%), Gaps = 2/263 (0%)
Frame = +2
Query: 35 FSQMRFREFEVDLATMVSVLPACAEMGMLLLGRAIHGHALKGRGFTGEVKFNNSLLDMYA 214
F QM + + T S+L A + + GR +HG K GF NSL+ Y
Sbjct: 239 FKQMLELGIKPNSYTFSSILKCFAAVARVEEGRQVHGLICK-LGFNSYNTVVNSLISFYF 297
Query: 215 KCGDLGSAIQVFGKMDKRCVVSWTSMISAYAREGHCDVAIELFREMEGEGIKPDLYTITS 394
+ A ++F ++ R V+SW SMIS Y + G D IE+F +M G+ DL T+ +
Sbjct: 298 VGRKVRCAQKLFDELTDRDVISWNSMISGYVKNGLDDRGIEIFIKMLVFGVDIDLATMVN 357
Query: 395 VLHACACNGLLKDGKDVHEYIINNS-LQSNLFVANALMELYAKCGSMSDARLVFDQMPVR 571
V ACA G L GK +H Y I + L + N L+++Y+KCG ++ A VF++M +
Sbjct: 358 VFVACANIGTLLLGKVLHSYSIKAATLDREVRFNNTLLDMYSKCGDLNSAIRVFERMDEK 417
Query: 572 DVISWNTMIGGYSKNCLPNEALKLFMKMQLE-FKPNSVTMSCILPACASLSALERGREVH 748
V+SW +MI GY + L + A+KLF +M+ P+ ++ IL ACA L+ G+ VH
Sbjct: 418 TVVSWTSMITGYVREGLSDGAIKLFDEMKSRGVVPDVYAVTSILNACAINGNLKSGKIVH 477
Query: 749 ASILRNGFSFDHYVSNALIDMYA 817
I N + +VSNAL DMYA
Sbjct: 478 DYIRENNLETNSFVSNALTDMYA 500
Score = 133 bits (334), Expect = 9e-29
Identities = 84/252 (33%), Positives = 131/252 (51%), Gaps = 2/252 (0%)
Frame = +2
Query: 68 DLATMVSVLPACAEMGMLLLGRAIHGHALKGRGFTGEVKFNNSLLDMYAKCGDLGSAIQV 247
DL S+L CAE + GR + ++ G + L+ MY KCGDL V
Sbjct: 149 DLGAYCSILQLCAERKSIRDGRRVRS-IIESSGVMIDGILGVKLVFMYVKCGDLKEGRMV 207
Query: 248 FGKMDKRCVVSWTSMISAYAREGHCDVAIELFREMEGEGIKPDLYTITSVLHACACNGLL 427
F K+ + + W MIS Y+ G+ +I LF++M GIKP+ YT +S+L A +
Sbjct: 208 FDKLSESKIFLWNLMISEYSGSGNYGESINLFKQMLELGIKPNSYTFSSILKCFAAVARV 267
Query: 428 KDGKDVHEYIINNSLQSNLFVANALMELYAKCGSMSDARLVFDQMPVRDVISWNTMIGGY 607
++G+ VH I S V N+L+ Y + A+ +FD++ RDVISWN+MI GY
Sbjct: 268 EEGRQVHGLICKLGFNSYNTVVNSLISFYFVGRKVRCAQKLFDELTDRDVISWNSMISGY 327
Query: 608 SKNCLPNEALKLFMKMQL-EFKPNSVTMSCILPACASLSALERGREVHA-SILRNGFSFD 781
KN L + +++F+KM + + TM + ACA++ L G+ +H+ SI +
Sbjct: 328 VKNGLDDRGIEIFIKMLVFGVDIDLATMVNVFVACANIGTLLLGKVLHSYSIKAATLDRE 387
Query: 782 HYVSNALIDMYA 817
+N L+DMY+
Sbjct: 388 VRFNNTLLDMYS 399
>gb|AHB18405.1| pentatricopeptide repeat-containing protein [Gossypium hirsutum]
Length = 875
Score = 334 bits (856), Expect = 3e-89
Identities = 164/271 (60%), Positives = 206/271 (76%)
Frame = +2
Query: 2 SNGLAEKGRETFSQMRFREFEVDLATMVSVLPACAEMGMLLLGRAIHGHALKGRGFTGEV 181
SNGL E+G + QM + +VDLAT++SVL CA G L LG+A+H A+K F +
Sbjct: 278 SNGLTERGLGIYKQMMYLGIDVDLATIISVLVGCANSGTLSLGKAVHSLAIKS-SFERRI 336
Query: 182 KFNNSLLDMYAKCGDLGSAIQVFGKMDKRCVVSWTSMISAYAREGHCDVAIELFREMEGE 361
F+N+LLDMY+KCGDL A++VF KM +R VVSWTSMI+ Y R+G D AI L ++ME E
Sbjct: 337 NFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGWSDGAIILLQQMEKE 396
Query: 362 GIKPDLYTITSVLHACACNGLLKDGKDVHEYIINNSLQSNLFVANALMELYAKCGSMSDA 541
G+K D+ ITS+LHACA +G L +GKDVH+YI N++ SNLFV NALM++YAKCGSM A
Sbjct: 397 GVKLDVVAITSILHACARSGSLDNGKDVHDYIKANNMASNLFVCNALMDMYAKCGSMEGA 456
Query: 542 RLVFDQMPVRDVISWNTMIGGYSKNCLPNEALKLFMKMQLEFKPNSVTMSCILPACASLS 721
VF M V+D+ISWNTM+GGYSKNCLPNEALK F M E KP+S TM+CILPACASLS
Sbjct: 457 NSVFSTMVVKDIISWNTMVGGYSKNCLPNEALKTFAAMLKELKPDSRTMACILPACASLS 516
Query: 722 ALERGREVHASILRNGFSFDHYVSNALIDMY 814
ALERG+E+H ILRNG+S D +V+NAL+D+Y
Sbjct: 517 ALERGKEIHGYILRNGYSSDRHVANALVDLY 547
Score = 162 bits (411), Expect = 1e-37
Identities = 99/262 (37%), Positives = 148/262 (56%), Gaps = 1/262 (0%)
Frame = +2
Query: 35 FSQMRFREFEVDLATMVSVLPACAEMGMLLLGRAIHGHALKGRGFTGEVKFNNSLLDMYA 214
F M + EV+ T VL A +G L G +HG+ LK GF NSL+ Y
Sbjct: 188 FKIMVEKGIEVNSYTFSCVLKCFAALGSLKEGECVHGYLLK-LGFGSCNSVVNSLIAFYF 246
Query: 215 KCGDLGSAIQVFGKMDKRCVVSWTSMISAYAREGHCDVAIELFREMEGEGIKPDLYTITS 394
K SA ++F K+ R V+SW SMIS Y G + + ++++M GI DL TI S
Sbjct: 247 KGKRPESASELFDKLCDRDVISWNSMISGYVSNGLTERGLGIYKQMMYLGIDVDLATIIS 306
Query: 395 VLHACACNGLLKDGKDVHEYIINNSLQSNLFVANALMELYAKCGSMSDARLVFDQMPVRD 574
VL CA +G L GK VH I +S + + +N L+++Y+KCG + A VF++M R+
Sbjct: 307 VLVGCANSGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERN 366
Query: 575 VISWNTMIGGYSKNCLPNEALKLFMKMQLE-FKPNSVTMSCILPACASLSALERGREVHA 751
V+SW +MI GY+++ + A+ L +M+ E K + V ++ IL ACA +L+ G++VH
Sbjct: 367 VVSWTSMIAGYTRDGWSDGAIILLQQMEKEGVKLDVVAITSILHACARSGSLDNGKDVHD 426
Query: 752 SILRNGFSFDHYVSNALIDMYA 817
I N + + +V NAL+DMYA
Sbjct: 427 YIKANNMASNLFVCNALMDMYA 448
Score = 162 bits (411), Expect = 1e-37
Identities = 90/248 (36%), Positives = 142/248 (57%), Gaps = 1/248 (0%)
Frame = +2
Query: 41 QMRFREFEVDLATMVSVLPACAEMGMLLLGRAIHGHALKGRGFTGEVKFNNSLLDMYAKC 220
QM ++D+ + S+L ACA G L G+ +H + +K + N+L+DMYAKC
Sbjct: 392 QMEKEGVKLDVVAITSILHACARSGSLDNGKDVHDY-IKANNMASNLFVCNALMDMYAKC 450
Query: 221 GDLGSAIQVFGKMDKRCVVSWTSMISAYAREGHCDVAIELFREMEGEGIKPDLYTITSVL 400
G + A VF M + ++SW +M+ Y++ + A++ F M E +KPD T+ +L
Sbjct: 451 GSMEGANSVFSTMVVKDIISWNTMVGGYSKNCLPNEALKTFAAMLKE-LKPDSRTMACIL 509
Query: 401 HACACNGLLKDGKDVHEYIINNSLQSNLFVANALMELYAKCGSMSDARLVFDQMPVRDVI 580
ACA L+ GK++H YI+ N S+ VANAL++LY KCG + ARL+FD +P +D++
Sbjct: 510 PACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLARLLFDMIPSKDLV 569
Query: 581 SWNTMIGGYSKNCLPNEALKLFMKMQ-LEFKPNSVTMSCILPACASLSALERGREVHASI 757
SW MI GY + NEA+ F +M+ +P+ V+ IL AC+ LE+G I
Sbjct: 570 SWTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYACSHSGLLEQGWRFF-YI 628
Query: 758 LRNGFSFD 781
++N F+ +
Sbjct: 629 MKNDFNIE 636
Score = 139 bits (349), Expect = 2e-30
Identities = 87/253 (34%), Positives = 130/253 (51%), Gaps = 1/253 (0%)
Frame = +2
Query: 62 EVDLATMVSVLPACAEMGMLLLGRAIHGHALKGRGFTGEVKFNNSLLDMYAKCGDLGSAI 241
E++ T SVL CA + L G+ +H +K + L+ YA CGDL
Sbjct: 96 ELETKTYGSVLQLCAGLKSLTDGKKVHS-IIKSNSVGVDEALGLKLVSFYATCGDLKEGR 154
Query: 242 QVFGKMDKRCVVSWTSMISAYAREGHCDVAIELFREMEGEGIKPDLYTITSVLHACACNG 421
+VF M+K+ V W M+S YA+ G +I LF+ M +GI+ + YT + VL A G
Sbjct: 155 RVFDTMEKKNVYLWNFMVSEYAKIGDFKESICLFKIMVEKGIEVNSYTFSCVLKCFAALG 214
Query: 422 LLKDGKDVHEYIINNSLQSNLFVANALMELYAKCGSMSDARLVFDQMPVRDVISWNTMIG 601
LK+G+ VH Y++ S V N+L+ Y K A +FD++ RDVISWN+MI
Sbjct: 215 SLKEGECVHGYLLKLGFGSCNSVVNSLIAFYFKGKRPESASELFDKLCDRDVISWNSMIS 274
Query: 602 GYSKNCLPNEALKLFMKMQ-LEFKPNSVTMSCILPACASLSALERGREVHASILRNGFSF 778
GY N L L ++ +M L + T+ +L CA+ L G+ VH+ +++ F
Sbjct: 275 GYVSNGLTERGLGIYKQMMYLGIDVDLATIISVLVGCANSGTLSLGKAVHSLAIKSSFER 334
Query: 779 DHYVSNALIDMYA 817
SN L+DMY+
Sbjct: 335 RINFSNTLLDMYS 347
>ref|XP_004504288.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like isoform X1 [Cicer arietinum]
gi|502140652|ref|XP_004504289.1| PREDICTED:
pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like isoform X2 [Cicer arietinum]
Length = 879
Score = 328 bits (840), Expect = 2e-87
Identities = 158/271 (58%), Positives = 205/271 (75%)
Frame = +2
Query: 5 NGLAEKGRETFSQMRFREFEVDLATMVSVLPACAEMGMLLLGRAIHGHALKGRGFTGEVK 184
NG + G E F QM VDL T+VSVL ACA +G L LGRA+H +K F+GEV
Sbjct: 284 NGFSRNGLEIFIQMLILGVGVDLTTLVSVLVACANIGNLSLGRALHAFGVKAP-FSGEVV 342
Query: 185 FNNSLLDMYAKCGDLGSAIQVFGKMDKRCVVSWTSMISAYAREGHCDVAIELFREMEGEG 364
F+N+LLDMY+KCG+L A +VF KM + +VSWTS+I+AY REG D AI LF EM+ +G
Sbjct: 343 FSNTLLDMYSKCGNLNGATEVFVKMGETTIVSWTSIIAAYVREGLYDDAIGLFDEMQSKG 402
Query: 365 IKPDLYTITSVLHACACNGLLKDGKDVHEYIINNSLQSNLFVANALMELYAKCGSMSDAR 544
++PD+YT+TS++HACAC+ L G+DVH Y+I NS+ SNL VANALM +YAKCGSM +AR
Sbjct: 403 VRPDIYTVTSIVHACACSNSLDKGRDVHSYVIKNSMVSNLPVANALMNMYAKCGSMEEAR 462
Query: 545 LVFDQMPVRDVISWNTMIGGYSKNCLPNEALKLFMKMQLEFKPNSVTMSCILPACASLSA 724
LVF Q+P +D++SWNTMIGGYSKN LPN AL+LF M + KP+ +TM+C+LPACA L+A
Sbjct: 463 LVFSQIPAKDIVSWNTMIGGYSKNSLPNGALELFSDMVEQLKPDDITMACVLPACAGLAA 522
Query: 725 LERGREVHASILRNGFSFDHYVSNALIDMYA 817
L++GRE+H ILR G+ D +V+ AL+DMYA
Sbjct: 523 LDKGREIHGHILRRGYFSDLHVACALVDMYA 553
Score = 158 bits (400), Expect = 2e-36
Identities = 90/264 (34%), Positives = 148/264 (56%), Gaps = 1/264 (0%)
Frame = +2
Query: 8 GLAEKGRETFSQMRFREFEVDLATMVSVLPACAEMGMLLLGRAIHGHALKGRGFTGEVKF 187
GL + F +M+ + D+ T+ S++ ACA L GR +H + +K +
Sbjct: 386 GLYDDAIGLFDEMQSKGVRPDIYTVTSIVHACACSNSLDKGRDVHSYVIKN-SMVSNLPV 444
Query: 188 NNSLLDMYAKCGDLGSAIQVFGKMDKRCVVSWTSMISAYAREGHCDVAIELFREMEGEGI 367
N+L++MYAKCG + A VF ++ + +VSW +MI Y++ + A+ELF +M E +
Sbjct: 445 ANALMNMYAKCGSMEEARLVFSQIPAKDIVSWNTMIGGYSKNSLPNGALELFSDMV-EQL 503
Query: 368 KPDLYTITSVLHACACNGLLKDGKDVHEYIINNSLQSNLFVANALMELYAKCGSMSDARL 547
KPD T+ VL ACA L G+++H +I+ S+L VA AL+++YAKCG + A++
Sbjct: 504 KPDDITMACVLPACAGLAALDKGREIHGHILRRGYFSDLHVACALVDMYAKCGLLVLAQI 563
Query: 548 VFDQMPVRDVISWNTMIGGYSKNCLPNEALKLFMKMQLE-FKPNSVTMSCILPACASLSA 724
+FD +P +D+ISW MI GY + NEA+ F KM++ +P+ + + IL AC+
Sbjct: 564 LFDMIPKKDLISWTVMIAGYGMHGFGNEAISTFNKMRIAGIEPDESSFTAILNACS---- 619
Query: 725 LERGREVHASILRNGFSFDHYVSN 796
H+ +L G+ F + + N
Sbjct: 620 -------HSGLLNEGWRFFNSMRN 636
Score = 147 bits (371), Expect = 5e-33
Identities = 87/262 (33%), Positives = 148/262 (56%), Gaps = 1/262 (0%)
Frame = +2
Query: 35 FSQMRFREFEVDLATMVSVLPACAEMGMLLLGRAIHGHALKGRGFTGEVKFNNSLLDMYA 214
F++M+ D T VL +G + + +HG+ LK GF NSL+ Y
Sbjct: 193 FNKMQKLGIAGDSYTFTCVLKCFTALGKVKECKRVHGYVLK-LGFGSSTAVVNSLIAAYF 251
Query: 215 KCGDLGSAIQVFGKMDKRCVVSWTSMISAYAREGHCDVAIELFREMEGEGIKPDLYTITS 394
K G + SA +F ++ R VVSW SMI+ G +E+F +M G+ DL T+ S
Sbjct: 252 KFGGVESAHNLFDELSDRDVVSWNSMINGCVVNGFSRNGLEIFIQMLILGVGVDLTTLVS 311
Query: 395 VLHACACNGLLKDGKDVHEYIINNSLQSNLFVANALMELYAKCGSMSDARLVFDQMPVRD 574
VL ACA G L G+ +H + + + +N L+++Y+KCG+++ A VF +M
Sbjct: 312 VLVACANIGNLSLGRALHAFGVKAPFSGEVVFSNTLLDMYSKCGNLNGATEVFVKMGETT 371
Query: 575 VISWNTMIGGYSKNCLPNEALKLFMKMQLE-FKPNSVTMSCILPACASLSALERGREVHA 751
++SW ++I Y + L ++A+ LF +MQ + +P+ T++ I+ ACA ++L++GR+VH+
Sbjct: 372 IVSWTSIIAAYVREGLYDDAIGLFDEMQSKGVRPDIYTVTSIVHACACSNSLDKGRDVHS 431
Query: 752 SILRNGFSFDHYVSNALIDMYA 817
+++N + V+NAL++MYA
Sbjct: 432 YVIKNSMVSNLPVANALMNMYA 453
Score = 142 bits (358), Expect = 1e-31
Identities = 90/261 (34%), Positives = 136/261 (52%), Gaps = 1/261 (0%)
Frame = +2
Query: 38 SQMRFREFEVDLATMVSVLPACAEMGMLLLGRAIHGHALKGRGFTGEVKFNNSLLDMYAK 217
S +R E+ L T SVL CAE L G+ IH + +G + L+ MY
Sbjct: 93 SLIRSTRHELGLNTYCSVLQLCAERKSLEDGKRIH-FIIVSKGIPIKGALGAKLVFMYVN 151
Query: 218 CGDLGSAIQVFGKMDKRCVVSWTSMISAYAREGHCDVAIELFREMEGEGIKPDLYTITSV 397
CGDL ++F ++ V W M+S YA+ G+ ++ LF +M+ GI D YT T V
Sbjct: 152 CGDLVKGREIFDEILNDKVFLWNLMMSEYAKIGNYRESLGLFNKMQKLGIAGDSYTFTCV 211
Query: 398 LHACACNGLLKDGKDVHEYIINNSLQSNLFVANALMELYAKCGSMSDARLVFDQMPVRDV 577
L G +K+ K VH Y++ S+ V N+L+ Y K G + A +FD++ RDV
Sbjct: 212 LKCFTALGKVKECKRVHGYVLKLGFGSSTAVVNSLIAAYFKFGGVESAHNLFDELSDRDV 271
Query: 578 ISWNTMIGGYSKNCLPNEALKLFMKMQ-LEFKPNSVTMSCILPACASLSALERGREVHAS 754
+SWN+MI G N L++F++M L + T+ +L ACA++ L GR +HA
Sbjct: 272 VSWNSMINGCVVNGFSRNGLEIFIQMLILGVGVDLTTLVSVLVACANIGNLSLGRALHAF 331
Query: 755 ILRNGFSFDHYVSNALIDMYA 817
++ FS + SN L+DMY+
Sbjct: 332 GVKAPFSGEVVFSNTLLDMYS 352
>ref|XP_006597484.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Glycine max]
Length = 873
Score = 327 bits (838), Expect = 3e-87
Identities = 161/270 (59%), Positives = 204/270 (75%)
Frame = +2
Query: 5 NGLAEKGRETFSQMRFREFEVDLATMVSVLPACAEMGMLLLGRAIHGHALKGRGFTGEVK 184
NG + E F QM VDLAT+V+ + ACA +G L LGRA+HG +K F+ EV
Sbjct: 278 NGFSHSALEFFVQMLILRVGVDLATLVNSVAACANVGSLSLGRALHGQGVKAC-FSREVM 336
Query: 185 FNNSLLDMYAKCGDLGSAIQVFGKMDKRCVVSWTSMISAYAREGHCDVAIELFREMEGEG 364
FNN+LLDMY+KCG+L AIQ F KM ++ VVSWTS+I+AY REG D AI LF EME +G
Sbjct: 337 FNNTLLDMYSKCGNLNDAIQAFEKMGQKTVVSWTSLIAAYVREGLYDDAIRLFYEMESKG 396
Query: 365 IKPDLYTITSVLHACACNGLLKDGKDVHEYIINNSLQSNLFVANALMELYAKCGSMSDAR 544
+ PD+Y++TSVLHACAC L G+DVH YI N++ L V+NALM++YAKCGSM +A
Sbjct: 397 VSPDVYSMTSVLHACACGNSLDKGRDVHNYIRKNNMALCLPVSNALMDMYAKCGSMEEAY 456
Query: 545 LVFDQMPVRDVISWNTMIGGYSKNCLPNEALKLFMKMQLEFKPNSVTMSCILPACASLSA 724
LVF Q+PV+D++SWNTMIGGYSKN LPNEALKLF +MQ E +P+ +TM+C+LPAC SL+A
Sbjct: 457 LVFSQIPVKDIVSWNTMIGGYSKNSLPNEALKLFAEMQKESRPDGITMACLLPACGSLAA 516
Query: 725 LERGREVHASILRNGFSFDHYVSNALIDMY 814
LE GR +H ILRNG+S + +V+NALIDMY
Sbjct: 517 LEIGRGIHGCILRNGYSSELHVANALIDMY 546
Score = 164 bits (414), Expect = 5e-38
Identities = 92/244 (37%), Positives = 139/244 (56%), Gaps = 1/244 (0%)
Frame = +2
Query: 8 GLAEKGRETFSQMRFREFEVDLATMVSVLPACAEMGMLLLGRAIHGHALKGRGFTGEVKF 187
GL + F +M + D+ +M SVL ACA L GR +H + K +
Sbjct: 380 GLYDDAIRLFYEMESKGVSPDVYSMTSVLHACACGNSLDKGRDVHNYIRKNN-MALCLPV 438
Query: 188 NNSLLDMYAKCGDLGSAIQVFGKMDKRCVVSWTSMISAYAREGHCDVAIELFREMEGEGI 367
+N+L+DMYAKCG + A VF ++ + +VSW +MI Y++ + A++LF EM+ E
Sbjct: 439 SNALMDMYAKCGSMEEAYLVFSQIPVKDIVSWNTMIGGYSKNSLPNEALKLFAEMQKES- 497
Query: 368 KPDLYTITSVLHACACNGLLKDGKDVHEYIINNSLQSNLFVANALMELYAKCGSMSDARL 547
+PD T+ +L AC L+ G+ +H I+ N S L VANAL+++Y KCGS+ ARL
Sbjct: 498 RPDGITMACLLPACGSLAALEIGRGIHGCILRNGYSSELHVANALIDMYVKCGSLVHARL 557
Query: 548 VFDQMPVRDVISWNTMIGGYSKNCLPNEALKLFMKMQLE-FKPNSVTMSCILPACASLSA 724
+FD +P +D+I+W MI G + L NEA+ F KM++ KP+ +T + IL AC+
Sbjct: 558 LFDMIPEKDLITWTVMISGCGMHGLGNEAIATFQKMRIAGIKPDEITFTSILYACSHSGL 617
Query: 725 LERG 736
L G
Sbjct: 618 LNEG 621
Score = 141 bits (355), Expect = 3e-31
Identities = 85/248 (34%), Positives = 139/248 (56%), Gaps = 1/248 (0%)
Frame = +2
Query: 77 TMVSVLPACAEMGMLLLGRAIHGHALKGRGFTGEVKFNNSLLDMYAKCGDLGSAIQVFGK 256
T +L A +G + + IHG K GF NSL+ Y K G++ SA ++F +
Sbjct: 201 TFSCILKCFATLGRVGECKRIHGCVYK-LGFGSYNTVVNSLIATYFKSGEVDSAHKLFDE 259
Query: 257 MDKRCVVSWTSMISAYAREGHCDVAIELFREMEGEGIKPDLYTITSVLHACACNGLLKDG 436
+ R VVSW SMIS G A+E F +M + DL T+ + + ACA G L G
Sbjct: 260 LGDRDVVSWNSMISGCVMNGFSHSALEFFVQMLILRVGVDLATLVNSVAACANVGSLSLG 319
Query: 437 KDVHEYIINNSLQSNLFVANALMELYAKCGSMSDARLVFDQMPVRDVISWNTMIGGYSKN 616
+ +H + + N L+++Y+KCG+++DA F++M + V+SW ++I Y +
Sbjct: 320 RALHGQGVKACFSREVMFNNTLLDMYSKCGNLNDAIQAFEKMGQKTVVSWTSLIAAYVRE 379
Query: 617 CLPNEALKLFMKMQLE-FKPNSVTMSCILPACASLSALERGREVHASILRNGFSFDHYVS 793
L ++A++LF +M+ + P+ +M+ +L ACA ++L++GR+VH I +N + VS
Sbjct: 380 GLYDDAIRLFYEMESKGVSPDVYSMTSVLHACACGNSLDKGRDVHNYIRKNNMALCLPVS 439
Query: 794 NALIDMYA 817
NAL+DMYA
Sbjct: 440 NALMDMYA 447
Score = 122 bits (307), Expect = 1e-25
Identities = 80/254 (31%), Positives = 127/254 (50%), Gaps = 2/254 (0%)
Frame = +2
Query: 62 EVDLATMVSVLPACAEMGMLLLGRAIHGHALKGRGFTGEVKFNNSLLDMYAKCGDLGSAI 241
E+DL S+L CAE L G+ +H + G E L+ MY CG L
Sbjct: 94 ELDLNAYSSILQLCAEHKCLQEGKMVHS-VISSNGIPIEGVLGAKLVFMYVSCGALREGR 152
Query: 242 QVFGK-MDKRCVVSWTSMISAYAREGHCDVAIELFREMEGEGIKPDLYTITSVLHACACN 418
++F + V W M+S YA+ G +I LF++M+ GI + YT + +L A
Sbjct: 153 RIFDHILSDNKVFLWNLMMSEYAKIGDYRESIYLFKKMQKLGITGNSYTFSCILKCFATL 212
Query: 419 GLLKDGKDVHEYIINNSLQSNLFVANALMELYAKCGSMSDARLVFDQMPVRDVISWNTMI 598
G + + K +H + S V N+L+ Y K G + A +FD++ RDV+SWN+MI
Sbjct: 213 GRVGECKRIHGCVYKLGFGSYNTVVNSLIATYFKSGEVDSAHKLFDELGDRDVVSWNSMI 272
Query: 599 GGYSKNCLPNEALKLFMKMQ-LEFKPNSVTMSCILPACASLSALERGREVHASILRNGFS 775
G N + AL+ F++M L + T+ + ACA++ +L GR +H ++ FS
Sbjct: 273 SGCVMNGFSHSALEFFVQMLILRVGVDLATLVNSVAACANVGSLSLGRALHGQGVKACFS 332
Query: 776 FDHYVSNALIDMYA 817
+ +N L+DMY+
Sbjct: 333 REVMFNNTLLDMYS 346
>ref|XP_003629790.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355523812|gb|AET04266.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 908
Score = 327 bits (838), Expect = 3e-87
Identities = 156/271 (57%), Positives = 207/271 (76%)
Frame = +2
Query: 5 NGLAEKGRETFSQMRFREFEVDLATMVSVLPACAEMGMLLLGRAIHGHALKGRGFTGEVK 184
NG + G E F QM EVDL T+VSVL ACA +G L LGRA+HG +K F+ EV
Sbjct: 274 NGFSGNGLEIFIQMLILGVEVDLTTLVSVLVACANIGNLSLGRALHGFGVKAC-FSEEVV 332
Query: 185 FNNSLLDMYAKCGDLGSAIQVFGKMDKRCVVSWTSMISAYAREGHCDVAIELFREMEGEG 364
F+N+LLDMY+KCG+L A +VF KM +VSWTS+I+AY REG AI LF EM+ +G
Sbjct: 333 FSNTLLDMYSKCGNLNGATEVFVKMGDTTIVSWTSIIAAYVREGLYSDAIGLFDEMQSKG 392
Query: 365 IKPDLYTITSVLHACACNGLLKDGKDVHEYIINNSLQSNLFVANALMELYAKCGSMSDAR 544
++PD+YT+TS++HACAC+ L G+DVH Y+I N + SNL V NAL+ +YAKCGS+ +AR
Sbjct: 393 VRPDIYTVTSIVHACACSSSLDKGRDVHSYVIKNGMGSNLPVTNALINMYAKCGSVEEAR 452
Query: 545 LVFDQMPVRDVISWNTMIGGYSKNCLPNEALKLFMKMQLEFKPNSVTMSCILPACASLSA 724
LVF ++PV+D++SWNTMIGGYS+N LPNEAL+LF+ MQ +FKP+ +TM+C+LPACA L+A
Sbjct: 453 LVFSKIPVKDIVSWNTMIGGYSQNLLPNEALELFLDMQKQFKPDDITMACVLPACAGLAA 512
Query: 725 LERGREVHASILRNGFSFDHYVSNALIDMYA 817
L++GRE+H ILR G+ D +V+ AL+DMYA
Sbjct: 513 LDKGREIHGHILRRGYFSDLHVACALVDMYA 543
Score = 159 bits (402), Expect = 1e-36
Identities = 92/264 (34%), Positives = 148/264 (56%), Gaps = 1/264 (0%)
Frame = +2
Query: 8 GLAEKGRETFSQMRFREFEVDLATMVSVLPACAEMGMLLLGRAIHGHALKGRGFTGEVKF 187
GL F +M+ + D+ T+ S++ ACA L GR +H + +K G +
Sbjct: 376 GLYSDAIGLFDEMQSKGVRPDIYTVTSIVHACACSSSLDKGRDVHSYVIKN-GMGSNLPV 434
Query: 188 NNSLLDMYAKCGDLGSAIQVFGKMDKRCVVSWTSMISAYAREGHCDVAIELFREMEGEGI 367
N+L++MYAKCG + A VF K+ + +VSW +MI Y++ + A+ELF +M+ +
Sbjct: 435 TNALINMYAKCGSVEEARLVFSKIPVKDIVSWNTMIGGYSQNLLPNEALELFLDMQKQ-F 493
Query: 368 KPDLYTITSVLHACACNGLLKDGKDVHEYIINNSLQSNLFVANALMELYAKCGSMSDARL 547
KPD T+ VL ACA L G+++H +I+ S+L VA AL+++YAKCG + A+L
Sbjct: 494 KPDDITMACVLPACAGLAALDKGREIHGHILRRGYFSDLHVACALVDMYAKCGLLVLAQL 553
Query: 548 VFDQMPVRDVISWNTMIGGYSKNCLPNEALKLFMKMQLE-FKPNSVTMSCILPACASLSA 724
+FD +P +D+ISW MI GY + NEA+ F +M++ +P+ + S IL AC+
Sbjct: 554 LFDMIPKKDLISWTVMIAGYGMHGFGNEAISTFNEMRIAGIEPDESSFSAILNACS---- 609
Query: 725 LERGREVHASILRNGFSFDHYVSN 796
H+ +L G+ F + + N
Sbjct: 610 -------HSGLLNEGWKFFNSMRN 626
Score = 151 bits (381), Expect = 3e-34
Identities = 87/248 (35%), Positives = 145/248 (58%), Gaps = 1/248 (0%)
Frame = +2
Query: 77 TMVSVLPACAEMGMLLLGRAIHGHALKGRGFTGEVKFNNSLLDMYAKCGDLGSAIQVFGK 256
T VL A +G + + +HG+ LK GF NSL+ Y K G + SA +F +
Sbjct: 197 TFTCVLKCFAALGKVKECKRVHGYVLK-LGFGSNTAVVNSLIAAYFKFGGVESAHNLFDE 255
Query: 257 MDKRCVVSWTSMISAYAREGHCDVAIELFREMEGEGIKPDLYTITSVLHACACNGLLKDG 436
+ + VVSW SMI+ G +E+F +M G++ DL T+ SVL ACA G L G
Sbjct: 256 LSEPDVVSWNSMINGCVVNGFSGNGLEIFIQMLILGVEVDLTTLVSVLVACANIGNLSLG 315
Query: 437 KDVHEYIINNSLQSNLFVANALMELYAKCGSMSDARLVFDQMPVRDVISWNTMIGGYSKN 616
+ +H + + + +N L+++Y+KCG+++ A VF +M ++SW ++I Y +
Sbjct: 316 RALHGFGVKACFSEEVVFSNTLLDMYSKCGNLNGATEVFVKMGDTTIVSWTSIIAAYVRE 375
Query: 617 CLPNEALKLFMKMQLE-FKPNSVTMSCILPACASLSALERGREVHASILRNGFSFDHYVS 793
L ++A+ LF +MQ + +P+ T++ I+ ACA S+L++GR+VH+ +++NG + V+
Sbjct: 376 GLYSDAIGLFDEMQSKGVRPDIYTVTSIVHACACSSSLDKGRDVHSYVIKNGMGSNLPVT 435
Query: 794 NALIDMYA 817
NALI+MYA
Sbjct: 436 NALINMYA 443
Score = 142 bits (359), Expect = 1e-31
Identities = 84/256 (32%), Positives = 136/256 (53%), Gaps = 1/256 (0%)
Frame = +2
Query: 53 REFEVDLATMVSVLPACAEMGMLLLGRAIHGHALKGRGFTGEVKFNNSLLDMYAKCGDLG 232
+ +E+ L + SVL CAE L G+ +H + G + + L+ MY CGDL
Sbjct: 88 KSYELGLNSYCSVLQLCAEKKSLEDGKRVHS-VIISNGISVDEALGAKLVFMYVNCGDLV 146
Query: 233 SAIQVFGKMDKRCVVSWTSMISAYAREGHCDVAIELFREMEGEGIKPDLYTITSVLHACA 412
++F K+ V W ++S YA+ G+ ++ LF++M+ G+ + YT T VL A
Sbjct: 147 QGRKIFDKIMNDKVFLWNLLMSEYAKIGNFRESVSLFKKMQKLGVVGNCYTFTCVLKCFA 206
Query: 413 CNGLLKDGKDVHEYIINNSLQSNLFVANALMELYAKCGSMSDARLVFDQMPVRDVISWNT 592
G +K+ K VH Y++ SN V N+L+ Y K G + A +FD++ DV+SWN+
Sbjct: 207 ALGKVKECKRVHGYVLKLGFGSNTAVVNSLIAAYFKFGGVESAHNLFDELSEPDVVSWNS 266
Query: 593 MIGGYSKNCLPNEALKLFMKMQ-LEFKPNSVTMSCILPACASLSALERGREVHASILRNG 769
MI G N L++F++M L + + T+ +L ACA++ L GR +H ++
Sbjct: 267 MINGCVVNGFSGNGLEIFIQMLILGVEVDLTTLVSVLVACANIGNLSLGRALHGFGVKAC 326
Query: 770 FSFDHYVSNALIDMYA 817
FS + SN L+DMY+
Sbjct: 327 FSEEVVFSNTLLDMYS 342
>ref|XP_007148025.1| hypothetical protein PHAVU_006G174200g [Phaseolus vulgaris]
gi|561021248|gb|ESW20019.1| hypothetical protein
PHAVU_006G174200g [Phaseolus vulgaris]
Length = 871
Score = 324 bits (830), Expect = 3e-86
Identities = 161/270 (59%), Positives = 202/270 (74%)
Frame = +2
Query: 5 NGLAEKGRETFSQMRFREFEVDLATMVSVLPACAEMGMLLLGRAIHGHALKGRGFTGEVK 184
NG + + F QM VDLAT+V+VL ACA +G L GRA+HGH +K F EV+
Sbjct: 277 NGFSHTALDFFIQMLILRVGVDLATLVNVLVACANVGSLSFGRAVHGHGVKAC-FGREVR 335
Query: 185 FNNSLLDMYAKCGDLGSAIQVFGKMDKRCVVSWTSMISAYAREGHCDVAIELFREMEGEG 364
FNN+LLDMY+KCG+L AIQVFGKM + VVSWTS+ISAY REG D AI LF EME +G
Sbjct: 336 FNNTLLDMYSKCGNLNDAIQVFGKMGQTTVVSWTSLISAYVREGLYDDAIRLFYEMECKG 395
Query: 365 IKPDLYTITSVLHACACNGLLKDGKDVHEYIINNSLQSNLFVANALMELYAKCGSMSDAR 544
+ PD+Y++TSVLHACA + L G+D+H Y N++ +L V+NALM +YAKCGSM +A
Sbjct: 396 VSPDVYSMTSVLHACAHSNSLDKGRDLHNYFRKNNVTLSLPVSNALMNMYAKCGSMEEAY 455
Query: 545 LVFDQMPVRDVISWNTMIGGYSKNCLPNEALKLFMKMQLEFKPNSVTMSCILPACASLSA 724
LVF Q+PV+D++SWN MIGGYSKN LPNEALKLF +MQ E +P+ +TM+C+LPAC SL+A
Sbjct: 456 LVFSQIPVKDIVSWNIMIGGYSKNTLPNEALKLFSEMQEESRPDGITMACVLPACGSLAA 515
Query: 725 LERGREVHASILRNGFSFDHYVSNALIDMY 814
L+ GR +H ILRNG+ D YV NALIDMY
Sbjct: 516 LDIGRGIHGCILRNGYLSDLYVVNALIDMY 545
Score = 166 bits (420), Expect = 1e-38
Identities = 98/273 (35%), Positives = 149/273 (54%), Gaps = 3/273 (1%)
Frame = +2
Query: 8 GLAEKGRETFSQMRFREFEVDLATMVSVLPACAEMGMLLLGRAIHGHALKGRGFTGEVKF 187
GL + F +M + D+ +M SVL ACA L GR +H + K T +
Sbjct: 379 GLYDDAIRLFYEMECKGVSPDVYSMTSVLHACAHSNSLDKGRDLHNYFRKNN-VTLSLPV 437
Query: 188 NNSLLDMYAKCGDLGSAIQVFGKMDKRCVVSWTSMISAYAREGHCDVAIELFREMEGEGI 367
+N+L++MYAKCG + A VF ++ + +VSW MI Y++ + A++LF EM+ E
Sbjct: 438 SNALMNMYAKCGSMEEAYLVFSQIPVKDIVSWNIMIGGYSKNTLPNEALKLFSEMQEES- 496
Query: 368 KPDLYTITSVLHACACNGLLKDGKDVHEYIINNSLQSNLFVANALMELYAKCGSMSDARL 547
+PD T+ VL AC L G+ +H I+ N S+L+V NAL+++Y KCGS+ A+
Sbjct: 497 RPDGITMACVLPACGSLAALDIGRGIHGCILRNGYLSDLYVVNALIDMYVKCGSLVHAQF 556
Query: 548 VFDQMPVRDVISWNTMIGGYSKNCLPNEALKLFMKMQ-LEFKPNSVTMSCILPACASLSA 724
+FD + +D+ISW MI GY + NEA+ F KM+ + KP+ +T + IL AC+
Sbjct: 557 LFDMISEKDLISWTVMITGYGMHGFGNEAIATFQKMRTVGIKPDEITFTSILYACSHSGL 616
Query: 725 LERGREVHASILRNGF--SFDHYVSNALIDMYA 817
L G E+ SI DHY ++D+ A
Sbjct: 617 LNEGWEIFNSISECNIEPKLDHYA--CMVDLLA 647
Score = 139 bits (349), Expect = 2e-30
Identities = 83/248 (33%), Positives = 139/248 (56%), Gaps = 1/248 (0%)
Frame = +2
Query: 77 TMVSVLPACAEMGMLLLGRAIHGHALKGRGFTGEVKFNNSLLDMYAKCGDLGSAIQVFGK 256
T +L +G + ++IHG+ K GF NSL+ Y K G + +A ++F +
Sbjct: 200 TFSCILNCLRTLGRVGDCKSIHGYIYK-LGFGSYNTVVNSLIATYFKSGGVDNAHKLFDE 258
Query: 257 MDKRCVVSWTSMISAYAREGHCDVAIELFREMEGEGIKPDLYTITSVLHACACNGLLKDG 436
+ R VVSW SMIS G A++ F +M + DL T+ +VL ACA G L G
Sbjct: 259 LGDRDVVSWNSMISGCVMNGFSHTALDFFIQMLILRVGVDLATLVNVLVACANVGSLSFG 318
Query: 437 KDVHEYIINNSLQSNLFVANALMELYAKCGSMSDARLVFDQMPVRDVISWNTMIGGYSKN 616
+ VH + + + N L+++Y+KCG+++DA VF +M V+SW ++I Y +
Sbjct: 319 RAVHGHGVKACFGREVRFNNTLLDMYSKCGNLNDAIQVFGKMGQTTVVSWTSLISAYVRE 378
Query: 617 CLPNEALKLFMKMQLE-FKPNSVTMSCILPACASLSALERGREVHASILRNGFSFDHYVS 793
L ++A++LF +M+ + P+ +M+ +L ACA ++L++GR++H +N + VS
Sbjct: 379 GLYDDAIRLFYEMECKGVSPDVYSMTSVLHACAHSNSLDKGRDLHNYFRKNNVTLSLPVS 438
Query: 794 NALIDMYA 817
NAL++MYA
Sbjct: 439 NALMNMYA 446
Score = 135 bits (341), Expect = 1e-29
Identities = 86/254 (33%), Positives = 130/254 (51%), Gaps = 2/254 (0%)
Frame = +2
Query: 62 EVDLATMVSVLPACAEMGMLLLGRAIHGHALKGRGFTGEVKFNNSLLDMYAKCGDLGSAI 241
E+DL T S+L CAE L G+ +H + G E L+ MY CGDL
Sbjct: 93 ELDLNTFASILQLCAESKRLQEGKIVHS-IISSNGIPIEGLLGPKLVFMYVSCGDLREGR 151
Query: 242 QVFGK-MDKRCVVSWTSMISAYAREGHCDVAIELFREMEGEGIKPDLYTITSVLHACACN 418
++F + V W M+S YA+ G +I LFR+M+ GI + YT + +L+
Sbjct: 152 RIFDHTLSDNKVFLWNLMMSEYAKIGDYRESIYLFRKMQKLGIAGNSYTFSCILNCLRTL 211
Query: 419 GLLKDGKDVHEYIINNSLQSNLFVANALMELYAKCGSMSDARLVFDQMPVRDVISWNTMI 598
G + D K +H YI S V N+L+ Y K G + +A +FD++ RDV+SWN+MI
Sbjct: 212 GRVGDCKSIHGYIYKLGFGSYNTVVNSLIATYFKSGGVDNAHKLFDELGDRDVVSWNSMI 271
Query: 599 GGYSKNCLPNEALKLFMKMQ-LEFKPNSVTMSCILPACASLSALERGREVHASILRNGFS 775
G N + AL F++M L + T+ +L ACA++ +L GR VH ++ F
Sbjct: 272 SGCVMNGFSHTALDFFIQMLILRVGVDLATLVNVLVACANVGSLSFGRAVHGHGVKACFG 331
Query: 776 FDHYVSNALIDMYA 817
+ +N L+DMY+
Sbjct: 332 REVRFNNTLLDMYS 345
Score = 125 bits (314), Expect = 2e-26
Identities = 71/201 (35%), Positives = 114/201 (56%), Gaps = 1/201 (0%)
Frame = +2
Query: 5 NGLAEKGRETFSQMRFREFEVDLATMVSVLPACAEMGMLLLGRAIHGHALKGRGFTGEVK 184
N L + + FS+M+ E D TM VLPAC + L +GR IHG L+ G+ ++
Sbjct: 479 NTLPNEALKLFSEMQ-EESRPDGITMACVLPACGSLAALDIGRGIHGCILRN-GYLSDLY 536
Query: 185 FNNSLLDMYAKCGDLGSAIQVFGKMDKRCVVSWTSMISAYAREGHCDVAIELFREMEGEG 364
N+L+DMY KCG L A +F + ++ ++SWT MI+ Y G + AI F++M G
Sbjct: 537 VVNALIDMYVKCGSLVHAQFLFDMISEKDLISWTVMITGYGMHGFGNEAIATFQKMRTVG 596
Query: 365 IKPDLYTITSVLHACACNGLLKDGKDVHEYIINNSLQSNLFVANALMELYAKCGSMSDAR 544
IKPD T TS+L+AC+ +GLL +G ++ I +++ L +++L A+ G++S A
Sbjct: 597 IKPDEITFTSILYACSHSGLLNEGWEIFNSISECNIEPKLDHYACMVDLLARTGNLSKAY 656
Query: 545 LVFDQMPVR-DVISWNTMIGG 604
+ MP++ D W ++ G
Sbjct: 657 NFIETMPIKPDATVWGALLCG 677
>ref|XP_003608008.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355509063|gb|AES90205.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 1183
Score = 322 bits (825), Expect = 1e-85
Identities = 155/271 (57%), Positives = 205/271 (75%)
Frame = +2
Query: 5 NGLAEKGRETFSQMRFREFEVDLATMVSVLPACAEMGMLLLGRAIHGHALKGRGFTGEVK 184
NG + G E F QM EVDL T+VSVL A A +G L LGRA+HG +K F+ EV
Sbjct: 549 NGFSGNGLEIFIQMLILGVEVDLTTLVSVLVAWANIGNLSLGRALHGFGVKAC-FSEEVV 607
Query: 185 FNNSLLDMYAKCGDLGSAIQVFGKMDKRCVVSWTSMISAYAREGHCDVAIELFREMEGEG 364
F+N+LLDMY+KCG+L A +VF KM +VSWTS I+AY REG AI LF EM+ +G
Sbjct: 608 FSNTLLDMYSKCGNLNGATEVFVKMGDTTIVSWTSTIAAYVREGLYSDAIGLFDEMQSKG 667
Query: 365 IKPDLYTITSVLHACACNGLLKDGKDVHEYIINNSLQSNLFVANALMELYAKCGSMSDAR 544
++PD+YT+TS++HACAC+ L G+DVH Y+I N + SNL V NAL+ +YAKCGS+ +AR
Sbjct: 668 VRPDIYTVTSIVHACACSSSLDKGRDVHSYVIKNGMGSNLPVTNALINMYAKCGSVEEAR 727
Query: 545 LVFDQMPVRDVISWNTMIGGYSKNCLPNEALKLFMKMQLEFKPNSVTMSCILPACASLSA 724
LVF ++PV+D++SWNTMIGGYS+N LPNEAL+LF+ MQ +FKP+ +TM+C+LPACA L+A
Sbjct: 728 LVFSKIPVKDIVSWNTMIGGYSQNSLPNEALELFLDMQKQFKPDDITMACVLPACAGLAA 787
Query: 725 LERGREVHASILRNGFSFDHYVSNALIDMYA 817
L++GRE+H ILR G+ D +V+ AL+DMYA
Sbjct: 788 LDKGREIHGHILRRGYFSDLHVACALVDMYA 818
Score = 160 bits (405), Expect = 5e-37
Identities = 92/264 (34%), Positives = 148/264 (56%), Gaps = 1/264 (0%)
Frame = +2
Query: 8 GLAEKGRETFSQMRFREFEVDLATMVSVLPACAEMGMLLLGRAIHGHALKGRGFTGEVKF 187
GL F +M+ + D+ T+ S++ ACA L GR +H + +K G +
Sbjct: 651 GLYSDAIGLFDEMQSKGVRPDIYTVTSIVHACACSSSLDKGRDVHSYVIKN-GMGSNLPV 709
Query: 188 NNSLLDMYAKCGDLGSAIQVFGKMDKRCVVSWTSMISAYAREGHCDVAIELFREMEGEGI 367
N+L++MYAKCG + A VF K+ + +VSW +MI Y++ + A+ELF +M+ +
Sbjct: 710 TNALINMYAKCGSVEEARLVFSKIPVKDIVSWNTMIGGYSQNSLPNEALELFLDMQKQ-F 768
Query: 368 KPDLYTITSVLHACACNGLLKDGKDVHEYIINNSLQSNLFVANALMELYAKCGSMSDARL 547
KPD T+ VL ACA L G+++H +I+ S+L VA AL+++YAKCG + A+L
Sbjct: 769 KPDDITMACVLPACAGLAALDKGREIHGHILRRGYFSDLHVACALVDMYAKCGLLVLAQL 828
Query: 548 VFDQMPVRDVISWNTMIGGYSKNCLPNEALKLFMKMQLE-FKPNSVTMSCILPACASLSA 724
+FD +P +D+ISW MI GY + NEA+ F +M++ +P+ + S IL AC+
Sbjct: 829 LFDMIPKKDLISWTVMIAGYGMHGFGNEAISTFNEMRIAGIEPDESSFSVILNACS---- 884
Query: 725 LERGREVHASILRNGFSFDHYVSN 796
H+ +L G+ F + + N
Sbjct: 885 -------HSGLLNEGWKFFNSMRN 901
Score = 146 bits (368), Expect = 1e-32
Identities = 86/248 (34%), Positives = 143/248 (57%), Gaps = 1/248 (0%)
Frame = +2
Query: 77 TMVSVLPACAEMGMLLLGRAIHGHALKGRGFTGEVKFNNSLLDMYAKCGDLGSAIQVFGK 256
T VL A +G + + +HG+ LK GF NSL+ Y K G + SA +F +
Sbjct: 472 TFTCVLKCFAALGKVKECKRVHGYVLK-LGFGSNTAVVNSLIAAYFKFGGVESAHNLFDE 530
Query: 257 MDKRCVVSWTSMISAYAREGHCDVAIELFREMEGEGIKPDLYTITSVLHACACNGLLKDG 436
+ + VVSW SMI+ G +E+F +M G++ DL T+ SVL A A G L G
Sbjct: 531 LSEPDVVSWNSMINGCVVNGFSGNGLEIFIQMLILGVEVDLTTLVSVLVAWANIGNLSLG 590
Query: 437 KDVHEYIINNSLQSNLFVANALMELYAKCGSMSDARLVFDQMPVRDVISWNTMIGGYSKN 616
+ +H + + + +N L+++Y+KCG+++ A VF +M ++SW + I Y +
Sbjct: 591 RALHGFGVKACFSEEVVFSNTLLDMYSKCGNLNGATEVFVKMGDTTIVSWTSTIAAYVRE 650
Query: 617 CLPNEALKLFMKMQLE-FKPNSVTMSCILPACASLSALERGREVHASILRNGFSFDHYVS 793
L ++A+ LF +MQ + +P+ T++ I+ ACA S+L++GR+VH+ +++NG + V+
Sbjct: 651 GLYSDAIGLFDEMQSKGVRPDIYTVTSIVHACACSSSLDKGRDVHSYVIKNGMGSNLPVT 710
Query: 794 NALIDMYA 817
NALI+MYA
Sbjct: 711 NALINMYA 718
Score = 138 bits (347), Expect = 3e-30
Identities = 83/256 (32%), Positives = 135/256 (52%), Gaps = 1/256 (0%)
Frame = +2
Query: 53 REFEVDLATMVSVLPACAEMGMLLLGRAIHGHALKGRGFTGEVKFNNSLLDMYAKCGDLG 232
+ +E+ L + SVL CAE L G+ +H + G + + L+ MY CGDL
Sbjct: 363 KSYELGLNSYCSVLQLCAEKKSLEDGKRVHS-VIISNGISIDEALGAKLVFMYVNCGDLV 421
Query: 233 SAIQVFGKMDKRCVVSWTSMISAYAREGHCDVAIELFREMEGEGIKPDLYTITSVLHACA 412
++F K+ V W ++S YA+ G+ ++ LF++M+ G+ + YT T VL A
Sbjct: 422 QGRKIFDKIMNDKVFLWNLLMSEYAKIGNFRESVSLFKKMQKLGVVGNCYTFTCVLKCFA 481
Query: 413 CNGLLKDGKDVHEYIINNSLQSNLFVANALMELYAKCGSMSDARLVFDQMPVRDVISWNT 592
G +K+ K VH Y++ SN V N+L+ Y K G + A +FD++ DV+SWN+
Sbjct: 482 ALGKVKECKRVHGYVLKLGFGSNTAVVNSLIAAYFKFGGVESAHNLFDELSEPDVVSWNS 541
Query: 593 MIGGYSKNCLPNEALKLFMKMQ-LEFKPNSVTMSCILPACASLSALERGREVHASILRNG 769
MI G N L++F++M L + + T+ +L A A++ L GR +H ++
Sbjct: 542 MINGCVVNGFSGNGLEIFIQMLILGVEVDLTTLVSVLVAWANIGNLSLGRALHGFGVKAC 601
Query: 770 FSFDHYVSNALIDMYA 817
FS + SN L+DMY+
Sbjct: 602 FSEEVVFSNTLLDMYS 617
>ref|XP_006585174.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like, partial [Glycine max]
Length = 832
Score = 317 bits (812), Expect = 3e-84
Identities = 152/270 (56%), Positives = 206/270 (76%)
Frame = +2
Query: 5 NGLAEKGRETFSQMRFREFEVDLATMVSVLPACAEMGMLLLGRAIHGHALKGRGFTGEVK 184
NG + G E F QM +VD AT+V+VL ACA +G L LGRA+H + +K GF+G V
Sbjct: 298 NGFSRNGLEFFIQMLNLGVDVDSATLVNVLVACANVGNLTLGRALHAYGVKA-GFSGGVM 356
Query: 185 FNNSLLDMYAKCGDLGSAIQVFGKMDKRCVVSWTSMISAYAREGHCDVAIELFREMEGEG 364
FNN+LLDMY+KCG+L A +VF KM + +VSWTS+I+A+ REG AI LF EM+ +G
Sbjct: 357 FNNTLLDMYSKCGNLNGANEVFVKMGETTIVSWTSIIAAHVREGLHYEAIGLFDEMQSKG 416
Query: 365 IKPDLYTITSVLHACACNGLLKDGKDVHEYIINNSLQSNLFVANALMELYAKCGSMSDAR 544
++PD+Y +TSV+HACAC+ L G++VH +I N++ SNL V+NALM +YAKCGSM +A
Sbjct: 417 LRPDIYAVTSVVHACACSNSLDKGREVHNHIKKNNMGSNLPVSNALMNMYAKCGSMEEAN 476
Query: 545 LVFDQMPVRDVISWNTMIGGYSKNCLPNEALKLFMKMQLEFKPNSVTMSCILPACASLSA 724
L+F Q+PV++++SWNTMIGGYS+N LPNEAL+LF+ MQ + KP+ VTM+C+LPACA L+A
Sbjct: 477 LIFSQLPVKNIVSWNTMIGGYSQNSLPNEALQLFLDMQKQLKPDDVTMACVLPACAGLAA 536
Query: 725 LERGREVHASILRNGFSFDHYVSNALIDMY 814
LE+GRE+H ILR G+ D +V+ AL+DMY
Sbjct: 537 LEKGREIHGHILRKGYFSDLHVACALVDMY 566
Score = 152 bits (384), Expect = 1e-34
Identities = 88/258 (34%), Positives = 140/258 (54%), Gaps = 1/258 (0%)
Frame = +2
Query: 47 RFREFEVDLATMVSVLPACAEMGMLLLGRAIHGHALKGRGFTGEVKFNNSLLDMYAKCGD 226
R + E++L T SVL CAE+ L G+ +H + G + L+ MY CGD
Sbjct: 110 RSQRSELELNTYCSVLQLCAELKSLEDGKRVHS-IISSNGMAIDEVLGAKLVFMYVNCGD 168
Query: 227 LGSAIQVFGKMDKRCVVSWTSMISAYAREGHCDVAIELFREMEGEGIKPDLYTITSVLHA 406
L ++F + + W ++S YA+ G+ ++ LF +M+ GI+ D YT T VL
Sbjct: 169 LVKGRRIFDGILNDKIFLWNLLMSEYAKIGNYRESVGLFEKMQELGIRGDSYTFTCVLKG 228
Query: 407 CACNGLLKDGKDVHEYIINNSLQSNLFVANALMELYAKCGSMSDARLVFDQMPVRDVISW 586
A + +++ K VH Y++ S V N+L+ Y KCG + AR++FD++ RDV+SW
Sbjct: 229 FAASAKVRECKRVHGYVLKLGFGSYNAVVNSLIAAYFKCGEVESARILFDELSDRDVVSW 288
Query: 587 NTMIGGYSKNCLPNEALKLFMKM-QLEFKPNSVTMSCILPACASLSALERGREVHASILR 763
N+MI G + N L+ F++M L +S T+ +L ACA++ L GR +HA ++
Sbjct: 289 NSMISGCTMNGFSRNGLEFFIQMLNLGVDVDSATLVNVLVACANVGNLTLGRALHAYGVK 348
Query: 764 NGFSFDHYVSNALIDMYA 817
GFS +N L+DMY+
Sbjct: 349 AGFSGGVMFNNTLLDMYS 366
Score = 149 bits (375), Expect = 2e-33
Identities = 83/251 (33%), Positives = 141/251 (56%), Gaps = 1/251 (0%)
Frame = +2
Query: 8 GLAEKGRETFSQMRFREFEVDLATMVSVLPACAEMGMLLLGRAIHGHALKGRGFTGEVKF 187
GL + F +M+ + D+ + SV+ ACA L GR +H H +K +
Sbjct: 400 GLHYEAIGLFDEMQSKGLRPDIYAVTSVVHACACSNSLDKGREVHNH-IKKNNMGSNLPV 458
Query: 188 NNSLLDMYAKCGDLGSAIQVFGKMDKRCVVSWTSMISAYAREGHCDVAIELFREMEGEGI 367
+N+L++MYAKCG + A +F ++ + +VSW +MI Y++ + A++LF +M+ + +
Sbjct: 459 SNALMNMYAKCGSMEEANLIFSQLPVKNIVSWNTMIGGYSQNSLPNEALQLFLDMQKQ-L 517
Query: 368 KPDLYTITSVLHACACNGLLKDGKDVHEYIINNSLQSNLFVANALMELYAKCGSMSDARL 547
KPD T+ VL ACA L+ G+++H +I+ S+L VA AL+++Y KCG + A+
Sbjct: 518 KPDDVTMACVLPACAGLAALEKGREIHGHILRKGYFSDLHVACALVDMYVKCGLLVLAQQ 577
Query: 548 VFDQMPVRDVISWNTMIGGYSKNCLPNEALKLFMKMQLE-FKPNSVTMSCILPACASLSA 724
+FD +P +D+I W MI GY + EA+ F KM++ +P + + IL AC
Sbjct: 578 LFDMIPKKDMILWTVMIAGYGMHGFGKEAISTFEKMRVAGIEPEESSFTSILYACTHSGL 637
Query: 725 LERGREVHASI 757
L+ G ++ S+
Sbjct: 638 LKEGWKLFDSM 648
Score = 146 bits (368), Expect = 1e-32
Identities = 89/262 (33%), Positives = 141/262 (53%), Gaps = 1/262 (0%)
Frame = +2
Query: 35 FSQMRFREFEVDLATMVSVLPACAEMGMLLLGRAIHGHALKGRGFTGEVKFNNSLLDMYA 214
F +M+ D T VL A + + +HG+ LK GF NSL+ Y
Sbjct: 207 FEKMQELGIRGDSYTFTCVLKGFAASAKVRECKRVHGYVLK-LGFGSYNAVVNSLIAAYF 265
Query: 215 KCGDLGSAIQVFGKMDKRCVVSWTSMISAYAREGHCDVAIELFREMEGEGIKPDLYTITS 394
KCG++ SA +F ++ R VVSW SMIS G +E F +M G+ D T+ +
Sbjct: 266 KCGEVESARILFDELSDRDVVSWNSMISGCTMNGFSRNGLEFFIQMLNLGVDVDSATLVN 325
Query: 395 VLHACACNGLLKDGKDVHEYIINNSLQSNLFVANALMELYAKCGSMSDARLVFDQMPVRD 574
VL ACA G L G+ +H Y + + N L+++Y+KCG+++ A VF +M
Sbjct: 326 VLVACANVGNLTLGRALHAYGVKAGFSGGVMFNNTLLDMYSKCGNLNGANEVFVKMGETT 385
Query: 575 VISWNTMIGGYSKNCLPNEALKLFMKMQLE-FKPNSVTMSCILPACASLSALERGREVHA 751
++SW ++I + + L EA+ LF +MQ + +P+ ++ ++ ACA ++L++GREVH
Sbjct: 386 IVSWTSIIAAHVREGLHYEAIGLFDEMQSKGLRPDIYAVTSVVHACACSNSLDKGREVHN 445
Query: 752 SILRNGFSFDHYVSNALIDMYA 817
I +N + VSNAL++MYA
Sbjct: 446 HIKKNNMGSNLPVSNALMNMYA 467
>ref|XP_002522236.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223538489|gb|EEF40094.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 640
Score = 316 bits (810), Expect = 6e-84
Identities = 156/272 (57%), Positives = 200/272 (73%)
Frame = +2
Query: 2 SNGLAEKGRETFSQMRFREFEVDLATMVSVLPACAEMGMLLLGRAIHGHALKGRGFTGEV 181
+N L EKG + F +M + DL T+V+VL ACA G LGR +H A+K + +
Sbjct: 278 ANDLPEKGIQVFKEMLYLGVSFDLVTLVNVLAACANSGNFPLGRVLHAFAIKAQ-LDQRM 336
Query: 182 KFNNSLLDMYAKCGDLGSAIQVFGKMDKRCVVSWTSMISAYAREGHCDVAIELFREMEGE 361
F N+LLDMY+KCGDL +AI+VF KM +R VVSWTS+I+ YAREG I LF EME E
Sbjct: 337 TFVNTLLDMYSKCGDLNNAIRVFQKMGERSVVSWTSLIAGYAREGLSGEGIRLFHEMERE 396
Query: 362 GIKPDLYTITSVLHACACNGLLKDGKDVHEYIINNSLQSNLFVANALMELYAKCGSMSDA 541
G++PD +T+T+VLHACAC+G L+ GKDVH+Y+ N++Q + V N+LM++YAKCGSM DA
Sbjct: 397 GVRPDNFTVTAVLHACACSGSLEIGKDVHDYVKENNMQKDRIVCNSLMDMYAKCGSMEDA 456
Query: 542 RLVFDQMPVRDVISWNTMIGGYSKNCLPNEALKLFMKMQLEFKPNSVTMSCILPACASLS 721
LVF +MP +D++SWNTMIGGYSKN PNE L LF+ M E KP+ TM+CILPACASL+
Sbjct: 457 NLVFLEMPNKDIVSWNTMIGGYSKNGRPNETLHLFVAMVQELKPDGRTMACILPACASLA 516
Query: 722 ALERGREVHASILRNGFSFDHYVSNALIDMYA 817
AL+RGRE+H I RNG D +V+NALIDMYA
Sbjct: 517 ALDRGREIHGYIQRNGCFDDLHVANALIDMYA 548
Score = 164 bits (415), Expect = 4e-38
Identities = 93/271 (34%), Positives = 151/271 (55%), Gaps = 1/271 (0%)
Frame = +2
Query: 8 GLAEKGRETFSQMRFREFEVDLATMVSVLPACAEMGMLLLGRAIHGHALKGRGFTGEVKF 187
G E+ F +M +V+ T+ +L A +G + G +HG+ LK GF
Sbjct: 179 GAFEESVYLFRKMLDLGIQVNSHTVSCILKCFAALGSVKEGEWVHGYLLK-LGFGSYNTV 237
Query: 188 NNSLLDMYAKCGDLGSAIQVFGKMDKRCVVSWTSMISAYAREGHCDVAIELFREMEGEGI 367
NSL+ Y K + +A +VF ++ R +VSW SMIS + I++F+EM G+
Sbjct: 238 VNSLISFYFKTRKIEAAYEVFDELKNRDIVSWNSMISGTVANDLPEKGIQVFKEMLYLGV 297
Query: 368 KPDLYTITSVLHACACNGLLKDGKDVHEYIINNSLQSNLFVANALMELYAKCGSMSDARL 547
DL T+ +VL ACA +G G+ +H + I L + N L+++Y+KCG +++A
Sbjct: 298 SFDLVTLVNVLAACANSGNFPLGRVLHAFAIKAQLDQRMTFVNTLLDMYSKCGDLNNAIR 357
Query: 548 VFDQMPVRDVISWNTMIGGYSKNCLPNEALKLFMKMQLE-FKPNSVTMSCILPACASLSA 724
VF +M R V+SW ++I GY++ L E ++LF +M+ E +P++ T++ +L ACA +
Sbjct: 358 VFQKMGERSVVSWTSLIAGYAREGLSGEGIRLFHEMEREGVRPDNFTVTAVLHACACSGS 417
Query: 725 LERGREVHASILRNGFSFDHYVSNALIDMYA 817
LE G++VH + N D V N+L+DMYA
Sbjct: 418 LEIGKDVHDYVKENNMQKDRIVCNSLMDMYA 448
Score = 146 bits (369), Expect = 8e-33
Identities = 81/199 (40%), Positives = 118/199 (59%)
Frame = +2
Query: 8 GLAEKGRETFSQMRFREFEVDLATMVSVLPACAEMGMLLLGRAIHGHALKGRGFTGEVKF 187
GL+ +G F +M D T+ +VL ACA G L +G+ +H + +K +
Sbjct: 381 GLSGEGIRLFHEMEREGVRPDNFTVTAVLHACACSGSLEIGKDVHDY-VKENNMQKDRIV 439
Query: 188 NNSLLDMYAKCGDLGSAIQVFGKMDKRCVVSWTSMISAYAREGHCDVAIELFREMEGEGI 367
NSL+DMYAKCG + A VF +M + +VSW +MI Y++ G + + LF M E +
Sbjct: 440 CNSLMDMYAKCGSMEDANLVFLEMPNKDIVSWNTMIGGYSKNGRPNETLHLFVAMVQE-L 498
Query: 368 KPDLYTITSVLHACACNGLLKDGKDVHEYIINNSLQSNLFVANALMELYAKCGSMSDARL 547
KPD T+ +L ACA L G+++H YI N +L VANAL+++YAKCG+++ ARL
Sbjct: 499 KPDGRTMACILPACASLAALDRGREIHGYIQRNGCFDDLHVANALIDMYAKCGALALARL 558
Query: 548 VFDQMPVRDVISWNTMIGG 604
FD +PV+D+ISW MI G
Sbjct: 559 FFDMIPVKDLISWTVMIAG 577
Score = 134 bits (338), Expect = 3e-29
Identities = 80/252 (31%), Positives = 130/252 (51%), Gaps = 1/252 (0%)
Frame = +2
Query: 65 VDLATMVSVLPACAEMGMLLLGRAIHGHALKGRGFTGEVKFNNSLLDMYAKCGDLGSAIQ 244
+D T S+L CAE+ L G+ +H + G + L+ MY CGD+
Sbjct: 97 IDSNTYCSILQLCAELNSLQEGKKVHSF-ISSSGIFVDGLLGTKLVFMYVNCGDIREGRV 155
Query: 245 VFGKMDKRCVVSWTSMISAYAREGHCDVAIELFREMEGEGIKPDLYTITSVLHACACNGL 424
+F K+ V W M+S YA+ G + ++ LFR+M GI+ + +T++ +L A G
Sbjct: 156 IFDKIANEKVFLWNLMLSGYAKIGAFEESVYLFRKMLDLGIQVNSHTVSCILKCFAALGS 215
Query: 425 LKDGKDVHEYIINNSLQSNLFVANALMELYAKCGSMSDARLVFDQMPVRDVISWNTMIGG 604
+K+G+ VH Y++ S V N+L+ Y K + A VFD++ RD++SWN+MI G
Sbjct: 216 VKEGEWVHGYLLKLGFGSYNTVVNSLISFYFKTRKIEAAYEVFDELKNRDIVSWNSMISG 275
Query: 605 YSKNCLPNEALKLFMKM-QLEFKPNSVTMSCILPACASLSALERGREVHASILRNGFSFD 781
N LP + +++F +M L + VT+ +L ACA+ GR +HA ++
Sbjct: 276 TVANDLPEKGIQVFKEMLYLGVSFDLVTLVNVLAACANSGNFPLGRVLHAFAIKAQLDQR 335
Query: 782 HYVSNALIDMYA 817
N L+DMY+
Sbjct: 336 MTFVNTLLDMYS 347
>ref|XP_006282442.1| hypothetical protein CARUB_v10004110mg [Capsella rubella]
gi|482551147|gb|EOA15340.1| hypothetical protein
CARUB_v10004110mg [Capsella rubella]
Length = 872
Score = 313 bits (803), Expect = 4e-83
Identities = 157/274 (57%), Positives = 205/274 (74%), Gaps = 2/274 (0%)
Frame = +2
Query: 2 SNGLAEKGRETFSQMRFREFEVDLATMVSVLPACAEMGMLLLGRAIHGHALKGRGFTGEV 181
SNGLAE+G F QM E+DLAT+VSV ACA+ ++ LGRA+HG +K F+ E
Sbjct: 274 SNGLAEQGLSVFVQMLVSGVEIDLATIVSVFAACADSRLISLGRAVHGFGMKAC-FSRED 332
Query: 182 KFNNSLLDMYAKCGDLGSAIQVFGKMDKRCVVSWTSMISAYAREGHCDVAIELFREMEGE 361
+F N+LLDMY+KCGDL SA VF +M R VVS+TSMI+ YAREG A++LF EME E
Sbjct: 333 RFCNTLLDMYSKCGDLDSAKAVFTEMSDRSVVSYTSMIAGYAREGLAGEAVKLFGEMEKE 392
Query: 362 GIKPDLYTITSVLHACACNGLLKDGKDVHEYIINNSLQSNLFVANALMELYAKCGSMSDA 541
GI PD+YT+T+VL+ CA N LL +GK VHE+I N + ++FV+NALM++YAKCGSM +A
Sbjct: 393 GISPDVYTVTAVLNCCARNRLLDEGKRVHEWIKENDMGFDIFVSNALMDMYAKCGSMQEA 452
Query: 542 RLVFDQMPVRDVISWNTMIGGYSKNCLPNEALKLF--MKMQLEFKPNSVTMSCILPACAS 715
LVF +M VRD+ISWNT+IGGYSKNC NEAL LF + + F P+ T++C+LPACAS
Sbjct: 453 ELVFSEMRVRDIISWNTVIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACAS 512
Query: 716 LSALERGREVHASILRNGFSFDHYVSNALIDMYA 817
LSA ++GRE+H I+RNG+ D +V+N+L+DMYA
Sbjct: 513 LSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYA 546
Score = 160 bits (406), Expect = 4e-37
Identities = 93/262 (35%), Positives = 144/262 (54%), Gaps = 1/262 (0%)
Frame = +2
Query: 35 FSQMRFREFEVDLATMVSVLPACAEMGMLLLGRAIHGHALKGRGFTGEVKFNNSLLDMYA 214
F +M E+D T + + + + + G +HG+ LK GF NSL+ Y
Sbjct: 184 FKKMMSLGVEMDSYTFSCISKSFSSLRSVNGGEQLHGYILKS-GFGDRNSVGNSLVAFYL 242
Query: 215 KCGDLGSAIQVFGKMDKRCVVSWTSMISAYAREGHCDVAIELFREMEGEGIKPDLYTITS 394
K + SA +VF +M +R V+SW S+I+ Y G + + +F +M G++ DL TI S
Sbjct: 243 KNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEQGLSVFVQMLVSGVEIDLATIVS 302
Query: 395 VLHACACNGLLKDGKDVHEYIINNSLQSNLFVANALMELYAKCGSMSDARLVFDQMPVRD 574
V ACA + L+ G+ VH + + N L+++Y+KCG + A+ VF +M R
Sbjct: 303 VFAACADSRLISLGRAVHGFGMKACFSREDRFCNTLLDMYSKCGDLDSAKAVFTEMSDRS 362
Query: 575 VISWNTMIGGYSKNCLPNEALKLFMKMQLE-FKPNSVTMSCILPACASLSALERGREVHA 751
V+S+ +MI GY++ L EA+KLF +M+ E P+ T++ +L CA L+ G+ VH
Sbjct: 363 VVSYTSMIAGYAREGLAGEAVKLFGEMEKEGISPDVYTVTAVLNCCARNRLLDEGKRVHE 422
Query: 752 SILRNGFSFDHYVSNALIDMYA 817
I N FD +VSNAL+DMYA
Sbjct: 423 WIKENDMGFDIFVSNALMDMYA 444
Score = 150 bits (378), Expect = 7e-34
Identities = 86/274 (31%), Positives = 152/274 (55%), Gaps = 4/274 (1%)
Frame = +2
Query: 8 GLAEKGRETFSQMRFREFEVDLATMVSVLPACAEMGMLLLGRAIHGHALKGRGFTGEVKF 187
GLA + + F +M D+ T+ +VL CA +L G+ +H +K ++
Sbjct: 377 GLAGEAVKLFGEMEKEGISPDVYTVTAVLNCCARNRLLDEGKRVH-EWIKENDMGFDIFV 435
Query: 188 NNSLLDMYAKCGDLGSAIQVFGKMDKRCVVSWTSMISAYAREGHCDVAIELFREM-EGEG 364
+N+L+DMYAKCG + A VF +M R ++SW ++I Y++ + + A+ LF + E +
Sbjct: 436 SNALMDMYAKCGSMQEAELVFSEMRVRDIISWNTVIGGYSKNCYANEALSLFNLLLEEKR 495
Query: 365 IKPDLYTITSVLHACACNGLLKDGKDVHEYIINNSLQSNLFVANALMELYAKCGSMSDAR 544
PD T+ VL ACA G+++H YI+ N S+ VAN+L+++YAKCG++ AR
Sbjct: 496 FSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAR 555
Query: 545 LVFDQMPVRDVISWNTMIGGYSKNCLPNEALKLFMKM-QLEFKPNSVTMSCILPACASLS 721
++FD + +D++SW MI GY + EA+ LF +M + + + ++ +L AC+
Sbjct: 556 MLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMREAGIEADEISFVSLLYACSHSG 615
Query: 722 ALERGREVHASILRNGFSFDHYVSN--ALIDMYA 817
++ G + +I+R+ + V + ++DM A
Sbjct: 616 LVDEGWRIF-NIMRHECKIEPTVEHYACIVDMLA 648
Score = 132 bits (333), Expect = 1e-28
Identities = 77/255 (30%), Positives = 132/255 (51%), Gaps = 1/255 (0%)
Frame = +2
Query: 56 EFEVDLATMVSVLPACAEMGMLLLGRAIHGHALKGRGFTGEVKFNNSLLDMYAKCGDLGS 235
++++D T+ SVL CA+ L G+ + ++ GF + + L MY CGDL
Sbjct: 90 KWDIDPRTLCSVLQLCADSKSLKGGKEVDSF-IRRNGFVIDSSLGSKLALMYTNCGDLKE 148
Query: 236 AIQVFGKMDKRCVVSWTSMISAYAREGHCDVAIELFREMEGEGIKPDLYTITSVLHACAC 415
A +VF ++ + W +++ A+ G +I LF++M G++ D YT + + + +
Sbjct: 149 ASRVFDQVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSLGVEMDSYTFSCISKSFSS 208
Query: 416 NGLLKDGKDVHEYIINNSLQSNLFVANALMELYAKCGSMSDARLVFDQMPVRDVISWNTM 595
+ G+ +H YI+ + V N+L+ Y K + AR VFD+M RDVISWN++
Sbjct: 209 LRSVNGGEQLHGYILKSGFGDRNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSI 268
Query: 596 IGGYSKNCLPNEALKLFMKMQLE-FKPNSVTMSCILPACASLSALERGREVHASILRNGF 772
I GY N L + L +F++M + + + T+ + ACA + GR VH ++ F
Sbjct: 269 INGYVSNGLAEQGLSVFVQMLVSGVEIDLATIVSVFAACADSRLISLGRAVHGFGMKACF 328
Query: 773 SFDHYVSNALIDMYA 817
S + N L+DMY+
Sbjct: 329 SREDRFCNTLLDMYS 343
>ref|XP_002870024.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297315860|gb|EFH46283.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 871
Score = 313 bits (801), Expect = 6e-83
Identities = 157/274 (57%), Positives = 205/274 (74%), Gaps = 2/274 (0%)
Frame = +2
Query: 2 SNGLAEKGRETFSQMRFREFEVDLATMVSVLPACAEMGMLLLGRAIHGHALKGRGFTGEV 181
SNGLAEKG F QM F E+DLAT+VSV CA+ ++ LGRA+H +K F+ E
Sbjct: 273 SNGLAEKGLSVFVQMLFSGIEIDLATIVSVFAGCADSRLISLGRAVHCFGVKAC-FSRED 331
Query: 182 KFNNSLLDMYAKCGDLGSAIQVFGKMDKRCVVSWTSMISAYAREGHCDVAIELFREMEGE 361
+F N+LLDMY+KCGDL SA VF +M R VVS+TSMI+ YAREG A++LF EME E
Sbjct: 332 RFCNTLLDMYSKCGDLDSAKVVFREMSGRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEE 391
Query: 362 GIKPDLYTITSVLHACACNGLLKDGKDVHEYIINNSLQSNLFVANALMELYAKCGSMSDA 541
GI PD+YT+T+VL+ CA N LL +GK VHE+I N + ++FV+NALM++YAKCGSM +A
Sbjct: 392 GISPDVYTVTAVLNCCARNRLLDEGKRVHEWIKENDMGFDIFVSNALMDMYAKCGSMREA 451
Query: 542 RLVFDQMPVRDVISWNTMIGGYSKNCLPNEALKLFMKMQLE--FKPNSVTMSCILPACAS 715
LVF +M V+D+ISWNT+IGGYSKNC NEAL LF + +E F P+ T++C+LPACAS
Sbjct: 452 ELVFSEMRVKDIISWNTVIGGYSKNCYANEALSLFNLLLVEKRFSPDERTVACVLPACAS 511
Query: 716 LSALERGREVHASILRNGFSFDHYVSNALIDMYA 817
LSA ++GRE+H I+RNG+ D +V+N+L+DMYA
Sbjct: 512 LSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYA 545
Score = 160 bits (405), Expect = 5e-37
Identities = 94/262 (35%), Positives = 144/262 (54%), Gaps = 1/262 (0%)
Frame = +2
Query: 35 FSQMRFREFEVDLATMVSVLPACAEMGMLLLGRAIHGHALKGRGFTGEVKFNNSLLDMYA 214
F +M E+D T V + + + + G +HG+ LK GF NSL+ Y
Sbjct: 183 FKKMMSSGVEMDSYTFSCVSKSFSSLRSVNGGEQLHGYILKS-GFGERNSVGNSLVAFYL 241
Query: 215 KCGDLGSAIQVFGKMDKRCVVSWTSMISAYAREGHCDVAIELFREMEGEGIKPDLYTITS 394
K + SA +VF +M +R V+SW S+I+ Y G + + +F +M GI+ DL TI S
Sbjct: 242 KNHRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLFSGIEIDLATIVS 301
Query: 395 VLHACACNGLLKDGKDVHEYIINNSLQSNLFVANALMELYAKCGSMSDARLVFDQMPVRD 574
V CA + L+ G+ VH + + N L+++Y+KCG + A++VF +M R
Sbjct: 302 VFAGCADSRLISLGRAVHCFGVKACFSREDRFCNTLLDMYSKCGDLDSAKVVFREMSGRS 361
Query: 575 VISWNTMIGGYSKNCLPNEALKLFMKMQLE-FKPNSVTMSCILPACASLSALERGREVHA 751
V+S+ +MI GY++ L EA+KLF +M+ E P+ T++ +L CA L+ G+ VH
Sbjct: 362 VVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARNRLLDEGKRVHE 421
Query: 752 SILRNGFSFDHYVSNALIDMYA 817
I N FD +VSNAL+DMYA
Sbjct: 422 WIKENDMGFDIFVSNALMDMYA 443
Score = 150 bits (379), Expect = 5e-34
Identities = 88/274 (32%), Positives = 151/274 (55%), Gaps = 4/274 (1%)
Frame = +2
Query: 8 GLAEKGRETFSQMRFREFEVDLATMVSVLPACAEMGMLLLGRAIHGHALKGRGFTGEVKF 187
GLA + + F +M D+ T+ +VL CA +L G+ +H +K ++
Sbjct: 376 GLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARNRLLDEGKRVH-EWIKENDMGFDIFV 434
Query: 188 NNSLLDMYAKCGDLGSAIQVFGKMDKRCVVSWTSMISAYAREGHCDVAIELFREMEGEG- 364
+N+L+DMYAKCG + A VF +M + ++SW ++I Y++ + + A+ LF + E
Sbjct: 435 SNALMDMYAKCGSMREAELVFSEMRVKDIISWNTVIGGYSKNCYANEALSLFNLLLVEKR 494
Query: 365 IKPDLYTITSVLHACACNGLLKDGKDVHEYIINNSLQSNLFVANALMELYAKCGSMSDAR 544
PD T+ VL ACA G+++H YI+ N S+ VAN+L+++YAKCG++ AR
Sbjct: 495 FSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAR 554
Query: 545 LVFDQMPVRDVISWNTMIGGYSKNCLPNEALKLFMKM-QLEFKPNSVTMSCILPACASLS 721
L+FD + +D++SW MI GY + EA+ LF +M Q +P+ ++ +L AC+
Sbjct: 555 LLFDDITSKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEPDEISFVSLLYACSHSG 614
Query: 722 ALERGREVHASILRNGFSFDHYVSN--ALIDMYA 817
++ G +I+R+ + V + ++DM A
Sbjct: 615 LVDEGWRFF-NIMRHECKIEPTVEHYACIVDMLA 647
Score = 135 bits (339), Expect = 2e-29
Identities = 78/255 (30%), Positives = 131/255 (51%), Gaps = 1/255 (0%)
Frame = +2
Query: 56 EFEVDLATMVSVLPACAEMGMLLLGRAIHGHALKGRGFTGEVKFNNSLLDMYAKCGDLGS 235
++++D T+ SVL CA+ L G+ + ++G GF + + L MY CGDL
Sbjct: 89 KWDIDPRTLCSVLQLCADSKSLKDGKEVDNF-IRGNGFVLDSNLGSKLALMYTNCGDLKE 147
Query: 236 AIQVFGKMDKRCVVSWTSMISAYAREGHCDVAIELFREMEGEGIKPDLYTITSVLHACAC 415
A +VF ++ + W +++ A+ G +I LF++M G++ D YT + V + +
Sbjct: 148 ASRVFDQVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSS 207
Query: 416 NGLLKDGKDVHEYIINNSLQSNLFVANALMELYAKCGSMSDARLVFDQMPVRDVISWNTM 595
+ G+ +H YI+ + V N+L+ Y K + AR VFD+M RDVISWN++
Sbjct: 208 LRSVNGGEQLHGYILKSGFGERNSVGNSLVAFYLKNHRVDSARKVFDEMTERDVISWNSI 267
Query: 596 IGGYSKNCLPNEALKLFMKMQLE-FKPNSVTMSCILPACASLSALERGREVHASILRNGF 772
I GY N L + L +F++M + + T+ + CA + GR VH ++ F
Sbjct: 268 INGYVSNGLAEKGLSVFVQMLFSGIEIDLATIVSVFAGCADSRLISLGRAVHCFGVKACF 327
Query: 773 SFDHYVSNALIDMYA 817
S + N L+DMY+
Sbjct: 328 SREDRFCNTLLDMYS 342
>dbj|BAD94843.1| putative protein [Arabidopsis thaliana]
Length = 720
Score = 308 bits (788), Expect = 2e-81
Identities = 155/274 (56%), Positives = 202/274 (73%), Gaps = 2/274 (0%)
Frame = +2
Query: 2 SNGLAEKGRETFSQMRFREFEVDLATMVSVLPACAEMGMLLLGRAIHGHALKGRGFTGEV 181
SNGLAEKG F QM E+DLAT+VSV CA+ ++ LGRA+H +K F+ E
Sbjct: 122 SNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKAC-FSRED 180
Query: 182 KFNNSLLDMYAKCGDLGSAIQVFGKMDKRCVVSWTSMISAYAREGHCDVAIELFREMEGE 361
+F N+LLDMY+KCGDL SA VF +M R VVS+TSMI+ YAREG A++LF EME E
Sbjct: 181 RFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEE 240
Query: 362 GIKPDLYTITSVLHACACNGLLKDGKDVHEYIINNSLQSNLFVANALMELYAKCGSMSDA 541
GI PD+YT+T+VL+ CA LL +GK VHE+I N L ++FV+NALM++YAKCGSM +A
Sbjct: 241 GISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEA 300
Query: 542 RLVFDQMPVRDVISWNTMIGGYSKNCLPNEALKLF--MKMQLEFKPNSVTMSCILPACAS 715
LVF +M V+D+ISWNT+IGGYSKNC NEAL LF + + F P+ T++C+LPACAS
Sbjct: 301 ELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACAS 360
Query: 716 LSALERGREVHASILRNGFSFDHYVSNALIDMYA 817
LSA ++GRE+H I+RNG+ D +V+N+L+DMYA
Sbjct: 361 LSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYA 394
Score = 159 bits (402), Expect = 1e-36
Identities = 94/262 (35%), Positives = 141/262 (53%), Gaps = 1/262 (0%)
Frame = +2
Query: 35 FSQMRFREFEVDLATMVSVLPACAEMGMLLLGRAIHGHALKGRGFTGEVKFNNSLLDMYA 214
F +M E+D T V + + + + G +HG LK GF NSL+ Y
Sbjct: 32 FKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFILKS-GFGERNSVGNSLVAFYL 90
Query: 215 KCGDLGSAIQVFGKMDKRCVVSWTSMISAYAREGHCDVAIELFREMEGEGIKPDLYTITS 394
K + SA +VF +M +R V+SW S+I+ Y G + + +F +M GI+ DL TI S
Sbjct: 91 KNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVS 150
Query: 395 VLHACACNGLLKDGKDVHEYIINNSLQSNLFVANALMELYAKCGSMSDARLVFDQMPVRD 574
V CA + L+ G+ VH + N L+++Y+KCG + A+ VF +M R
Sbjct: 151 VFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRS 210
Query: 575 VISWNTMIGGYSKNCLPNEALKLFMKMQLE-FKPNSVTMSCILPACASLSALERGREVHA 751
V+S+ +MI GY++ L EA+KLF +M+ E P+ T++ +L CA L+ G+ VH
Sbjct: 211 VVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHE 270
Query: 752 SILRNGFSFDHYVSNALIDMYA 817
I N FD +VSNAL+DMYA
Sbjct: 271 WIKENDLGFDIFVSNALMDMYA 292
Score = 147 bits (370), Expect = 6e-33
Identities = 85/274 (31%), Positives = 150/274 (54%), Gaps = 4/274 (1%)
Frame = +2
Query: 8 GLAEKGRETFSQMRFREFEVDLATMVSVLPACAEMGMLLLGRAIHGHALKGRGFTGEVKF 187
GLA + + F +M D+ T+ +VL CA +L G+ +H +K ++
Sbjct: 225 GLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVH-EWIKENDLGFDIFV 283
Query: 188 NNSLLDMYAKCGDLGSAIQVFGKMDKRCVVSWTSMISAYAREGHCDVAIELFREM-EGEG 364
+N+L+DMYAKCG + A VF +M + ++SW ++I Y++ + + A+ LF + E +
Sbjct: 284 SNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKR 343
Query: 365 IKPDLYTITSVLHACACNGLLKDGKDVHEYIINNSLQSNLFVANALMELYAKCGSMSDAR 544
PD T+ VL ACA G+++H YI+ N S+ VAN+L+++YAKCG++ A
Sbjct: 344 FSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAH 403
Query: 545 LVFDQMPVRDVISWNTMIGGYSKNCLPNEALKLFMKM-QLEFKPNSVTMSCILPACASLS 721
++FD + +D++SW MI GY + EA+ LF +M Q + + ++ +L AC+
Sbjct: 404 MLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSG 463
Query: 722 ALERGREVHASILRNGFSFDHYVSN--ALIDMYA 817
++ G +I+R+ + V + ++DM A
Sbjct: 464 LVDEGWRFF-NIMRHECKIEPTVEHYACIVDMLA 496
Score = 99.8 bits (247), Expect = 1e-18
Identities = 55/180 (30%), Positives = 95/180 (52%), Gaps = 1/180 (0%)
Frame = +2
Query: 281 WTSMISAYAREGHCDVAIELFREMEGEGIKPDLYTITSVLHACACNGLLKDGKDVHEYII 460
W +++ A+ G +I LF++M G++ D YT + V + + + G+ +H +I+
Sbjct: 12 WNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFIL 71
Query: 461 NNSLQSNLFVANALMELYAKCGSMSDARLVFDQMPVRDVISWNTMIGGYSKNCLPNEALK 640
+ V N+L+ Y K + AR VFD+M RDVISWN++I GY N L + L
Sbjct: 72 KSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLS 131
Query: 641 LFMKMQLE-FKPNSVTMSCILPACASLSALERGREVHASILRNGFSFDHYVSNALIDMYA 817
+F++M + + + T+ + CA + GR VH+ ++ FS + N L+DMY+
Sbjct: 132 VFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYS 191
>ref|NP_193610.1| pentatricopeptide repeat protein DOT4 [Arabidopsis thaliana]
gi|75206861|sp|Q9SN39.1|PP320_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At4g18750, chloroplastic; Flags: Precursor
gi|4539394|emb|CAB37460.1| putative protein [Arabidopsis
thaliana] gi|7268669|emb|CAB78877.1| putative protein
[Arabidopsis thaliana] gi|332658686|gb|AEE84086.1|
pentatricopeptide repeat-containing protein [Arabidopsis
thaliana]
Length = 871
Score = 308 bits (788), Expect = 2e-81
Identities = 155/274 (56%), Positives = 202/274 (73%), Gaps = 2/274 (0%)
Frame = +2
Query: 2 SNGLAEKGRETFSQMRFREFEVDLATMVSVLPACAEMGMLLLGRAIHGHALKGRGFTGEV 181
SNGLAEKG F QM E+DLAT+VSV CA+ ++ LGRA+H +K F+ E
Sbjct: 273 SNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKAC-FSRED 331
Query: 182 KFNNSLLDMYAKCGDLGSAIQVFGKMDKRCVVSWTSMISAYAREGHCDVAIELFREMEGE 361
+F N+LLDMY+KCGDL SA VF +M R VVS+TSMI+ YAREG A++LF EME E
Sbjct: 332 RFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEE 391
Query: 362 GIKPDLYTITSVLHACACNGLLKDGKDVHEYIINNSLQSNLFVANALMELYAKCGSMSDA 541
GI PD+YT+T+VL+ CA LL +GK VHE+I N L ++FV+NALM++YAKCGSM +A
Sbjct: 392 GISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEA 451
Query: 542 RLVFDQMPVRDVISWNTMIGGYSKNCLPNEALKLF--MKMQLEFKPNSVTMSCILPACAS 715
LVF +M V+D+ISWNT+IGGYSKNC NEAL LF + + F P+ T++C+LPACAS
Sbjct: 452 ELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACAS 511
Query: 716 LSALERGREVHASILRNGFSFDHYVSNALIDMYA 817
LSA ++GRE+H I+RNG+ D +V+N+L+DMYA
Sbjct: 512 LSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYA 545
Score = 159 bits (402), Expect = 1e-36
Identities = 94/262 (35%), Positives = 141/262 (53%), Gaps = 1/262 (0%)
Frame = +2
Query: 35 FSQMRFREFEVDLATMVSVLPACAEMGMLLLGRAIHGHALKGRGFTGEVKFNNSLLDMYA 214
F +M E+D T V + + + + G +HG LK GF NSL+ Y
Sbjct: 183 FKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFILKS-GFGERNSVGNSLVAFYL 241
Query: 215 KCGDLGSAIQVFGKMDKRCVVSWTSMISAYAREGHCDVAIELFREMEGEGIKPDLYTITS 394
K + SA +VF +M +R V+SW S+I+ Y G + + +F +M GI+ DL TI S
Sbjct: 242 KNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVS 301
Query: 395 VLHACACNGLLKDGKDVHEYIINNSLQSNLFVANALMELYAKCGSMSDARLVFDQMPVRD 574
V CA + L+ G+ VH + N L+++Y+KCG + A+ VF +M R
Sbjct: 302 VFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRS 361
Query: 575 VISWNTMIGGYSKNCLPNEALKLFMKMQLE-FKPNSVTMSCILPACASLSALERGREVHA 751
V+S+ +MI GY++ L EA+KLF +M+ E P+ T++ +L CA L+ G+ VH
Sbjct: 362 VVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHE 421
Query: 752 SILRNGFSFDHYVSNALIDMYA 817
I N FD +VSNAL+DMYA
Sbjct: 422 WIKENDLGFDIFVSNALMDMYA 443
Score = 147 bits (370), Expect = 6e-33
Identities = 85/274 (31%), Positives = 150/274 (54%), Gaps = 4/274 (1%)
Frame = +2
Query: 8 GLAEKGRETFSQMRFREFEVDLATMVSVLPACAEMGMLLLGRAIHGHALKGRGFTGEVKF 187
GLA + + F +M D+ T+ +VL CA +L G+ +H +K ++
Sbjct: 376 GLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVH-EWIKENDLGFDIFV 434
Query: 188 NNSLLDMYAKCGDLGSAIQVFGKMDKRCVVSWTSMISAYAREGHCDVAIELFREM-EGEG 364
+N+L+DMYAKCG + A VF +M + ++SW ++I Y++ + + A+ LF + E +
Sbjct: 435 SNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKR 494
Query: 365 IKPDLYTITSVLHACACNGLLKDGKDVHEYIINNSLQSNLFVANALMELYAKCGSMSDAR 544
PD T+ VL ACA G+++H YI+ N S+ VAN+L+++YAKCG++ A
Sbjct: 495 FSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAH 554
Query: 545 LVFDQMPVRDVISWNTMIGGYSKNCLPNEALKLFMKM-QLEFKPNSVTMSCILPACASLS 721
++FD + +D++SW MI GY + EA+ LF +M Q + + ++ +L AC+
Sbjct: 555 MLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSG 614
Query: 722 ALERGREVHASILRNGFSFDHYVSN--ALIDMYA 817
++ G +I+R+ + V + ++DM A
Sbjct: 615 LVDEGWRFF-NIMRHECKIEPTVEHYACIVDMLA 647
Score = 133 bits (335), Expect = 7e-29
Identities = 77/255 (30%), Positives = 133/255 (52%), Gaps = 1/255 (0%)
Frame = +2
Query: 56 EFEVDLATMVSVLPACAEMGMLLLGRAIHGHALKGRGFTGEVKFNNSLLDMYAKCGDLGS 235
++++D T+ SVL CA+ L G+ + ++G GF + + L MY CGDL
Sbjct: 89 KWDIDPRTLCSVLQLCADSKSLKDGKEVDNF-IRGNGFVIDSNLGSKLSLMYTNCGDLKE 147
Query: 236 AIQVFGKMDKRCVVSWTSMISAYAREGHCDVAIELFREMEGEGIKPDLYTITSVLHACAC 415
A +VF ++ + W +++ A+ G +I LF++M G++ D YT + V + +
Sbjct: 148 ASRVFDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSS 207
Query: 416 NGLLKDGKDVHEYIINNSLQSNLFVANALMELYAKCGSMSDARLVFDQMPVRDVISWNTM 595
+ G+ +H +I+ + V N+L+ Y K + AR VFD+M RDVISWN++
Sbjct: 208 LRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSI 267
Query: 596 IGGYSKNCLPNEALKLFMKMQLE-FKPNSVTMSCILPACASLSALERGREVHASILRNGF 772
I GY N L + L +F++M + + + T+ + CA + GR VH+ ++ F
Sbjct: 268 INGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACF 327
Query: 773 SFDHYVSNALIDMYA 817
S + N L+DMY+
Sbjct: 328 SREDRFCNTLLDMYS 342