BLASTX nr result
ID: Cocculus22_contig00020397
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus22_contig00020397
(337 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006465771.1| PREDICTED: retinoblastoma-related protein-li... 91 2e-16
ref|XP_006432412.1| hypothetical protein CICLE_v10000128mg [Citr... 91 2e-16
ref|XP_006432410.1| hypothetical protein CICLE_v10000128mg [Citr... 91 2e-16
ref|XP_006432409.1| hypothetical protein CICLE_v10000128mg [Citr... 91 2e-16
gb|AAF61377.1|AF133675_1 retinoblastoma-related protein 1 [Popul... 91 2e-16
ref|XP_002297730.1| RETINOBLASTOMA-RELATED 1 family protein [Pop... 91 2e-16
ref|XP_002529988.1| conserved hypothetical protein [Ricinus comm... 87 2e-15
ref|XP_007010834.1| Retinoblastoma-related 1 [Theobroma cacao] g... 87 2e-15
emb|CBI20795.3| unnamed protein product [Vitis vinifera] 86 4e-15
ref|XP_002280874.2| PREDICTED: retinoblastoma-related protein-li... 86 4e-15
ref|XP_004307078.1| PREDICTED: retinoblastoma-related protein-li... 85 1e-14
ref|XP_003522419.1| PREDICTED: retinoblastoma-related protein 1-... 83 3e-14
ref|XP_006598087.1| PREDICTED: retinoblastoma-related protein 1-... 83 5e-14
ref|XP_007220909.1| hypothetical protein PRUPE_ppa000710mg [Prun... 83 5e-14
sp|Q2ABE5.1|RBR_CAMSI RecName: Full=Retinoblastoma-related prote... 83 5e-14
ref|XP_007201203.1| hypothetical protein PRUPE_ppa001995mg [Prun... 81 1e-13
ref|NP_001266162.1| retinoblastoma-related protein 1 [Solanum ly... 80 2e-13
ref|XP_006594366.1| PREDICTED: retinoblastoma-related protein 1-... 80 3e-13
ref|XP_006340923.1| PREDICTED: retinoblastoma-related protein 1-... 80 3e-13
sp|Q66WV0.1|RBR1_NICBE RecName: Full=Retinoblastoma-related prot... 80 4e-13
>ref|XP_006465771.1| PREDICTED: retinoblastoma-related protein-like [Citrus sinensis]
Length = 1024
Score = 90.9 bits (224), Expect = 2e-16
Identities = 51/112 (45%), Positives = 59/112 (52%)
Frame = +1
Query: 1 IATDGLTYFEDXXXXXXXXXXXXXXXKDYDNAIHNKCELDERVFINDEDXXXXXXXXXXX 180
I TDGL YFE+ KDYDNA NK ELDERVFIN++D
Sbjct: 310 IDTDGLIYFENLMDDSSLSSSLNILEKDYDNATRNKGELDERVFINEDDSLLGSGSLSGG 369
Query: 181 AMNMTSAKRKFDAIASPMKTITXXXXXXXXXXXXTNGFLPGLNVKMAPTPVS 336
A+N+T AKRKFD++ASP+KTIT NG G KM TPVS
Sbjct: 370 AVNITGAKRKFDSLASPVKTITSPLSPHRSSASHPNGIAGGATSKMVVTPVS 421
>ref|XP_006432412.1| hypothetical protein CICLE_v10000128mg [Citrus clementina]
gi|557534534|gb|ESR45652.1| hypothetical protein
CICLE_v10000128mg [Citrus clementina]
Length = 957
Score = 90.9 bits (224), Expect = 2e-16
Identities = 51/112 (45%), Positives = 59/112 (52%)
Frame = +1
Query: 1 IATDGLTYFEDXXXXXXXXXXXXXXXKDYDNAIHNKCELDERVFINDEDXXXXXXXXXXX 180
I TDGL YFE+ KDYDNA NK ELDERVFIN++D
Sbjct: 243 IDTDGLIYFENLMDDSSLSSSLNILEKDYDNATRNKGELDERVFINEDDSLLGSGSLSGG 302
Query: 181 AMNMTSAKRKFDAIASPMKTITXXXXXXXXXXXXTNGFLPGLNVKMAPTPVS 336
A+N+T AKRKFD++ASP+KTIT NG G KM TPVS
Sbjct: 303 AVNITGAKRKFDSLASPVKTITSPLSPHRSSASHPNGIAGGATSKMVVTPVS 354
>ref|XP_006432410.1| hypothetical protein CICLE_v10000128mg [Citrus clementina]
gi|567879705|ref|XP_006432411.1| hypothetical protein
CICLE_v10000128mg [Citrus clementina]
gi|557534532|gb|ESR45650.1| hypothetical protein
CICLE_v10000128mg [Citrus clementina]
gi|557534533|gb|ESR45651.1| hypothetical protein
CICLE_v10000128mg [Citrus clementina]
Length = 912
Score = 90.9 bits (224), Expect = 2e-16
Identities = 51/112 (45%), Positives = 59/112 (52%)
Frame = +1
Query: 1 IATDGLTYFEDXXXXXXXXXXXXXXXKDYDNAIHNKCELDERVFINDEDXXXXXXXXXXX 180
I TDGL YFE+ KDYDNA NK ELDERVFIN++D
Sbjct: 198 IDTDGLIYFENLMDDSSLSSSLNILEKDYDNATRNKGELDERVFINEDDSLLGSGSLSGG 257
Query: 181 AMNMTSAKRKFDAIASPMKTITXXXXXXXXXXXXTNGFLPGLNVKMAPTPVS 336
A+N+T AKRKFD++ASP+KTIT NG G KM TPVS
Sbjct: 258 AVNITGAKRKFDSLASPVKTITSPLSPHRSSASHPNGIAGGATSKMVVTPVS 309
>ref|XP_006432409.1| hypothetical protein CICLE_v10000128mg [Citrus clementina]
gi|557534531|gb|ESR45649.1| hypothetical protein
CICLE_v10000128mg [Citrus clementina]
Length = 1024
Score = 90.9 bits (224), Expect = 2e-16
Identities = 51/112 (45%), Positives = 59/112 (52%)
Frame = +1
Query: 1 IATDGLTYFEDXXXXXXXXXXXXXXXKDYDNAIHNKCELDERVFINDEDXXXXXXXXXXX 180
I TDGL YFE+ KDYDNA NK ELDERVFIN++D
Sbjct: 310 IDTDGLIYFENLMDDSSLSSSLNILEKDYDNATRNKGELDERVFINEDDSLLGSGSLSGG 369
Query: 181 AMNMTSAKRKFDAIASPMKTITXXXXXXXXXXXXTNGFLPGLNVKMAPTPVS 336
A+N+T AKRKFD++ASP+KTIT NG G KM TPVS
Sbjct: 370 AVNITGAKRKFDSLASPVKTITSPLSPHRSSASHPNGIAGGATSKMVVTPVS 421
>gb|AAF61377.1|AF133675_1 retinoblastoma-related protein 1 [Populus tremula x Populus
tremuloides]
Length = 1035
Score = 90.5 bits (223), Expect = 2e-16
Identities = 51/112 (45%), Positives = 58/112 (51%)
Frame = +1
Query: 1 IATDGLTYFEDXXXXXXXXXXXXXXXKDYDNAIHNKCELDERVFINDEDXXXXXXXXXXX 180
I DGL Y+ED KDYD+AI NK ELDERVFIN+ED
Sbjct: 323 INPDGLIYYEDLMEESSLQSSLNILEKDYDDAIRNKAELDERVFINEEDSLLGSGSVSAG 382
Query: 181 AMNMTSAKRKFDAIASPMKTITXXXXXXXXXXXXTNGFLPGLNVKMAPTPVS 336
++N+T AKRKFD I+SP KTIT NG N KMA TPVS
Sbjct: 383 SLNITGAKRKFDLISSPTKTITSPLSPHRSPASHANGIPGSANSKMAATPVS 434
>ref|XP_002297730.1| RETINOBLASTOMA-RELATED 1 family protein [Populus trichocarpa]
gi|254789789|sp|B9GLX8.1|RBR_POPTR RecName:
Full=Retinoblastoma-related protein
gi|222844988|gb|EEE82535.1| RETINOBLASTOMA-RELATED 1
family protein [Populus trichocarpa]
Length = 1035
Score = 90.5 bits (223), Expect = 2e-16
Identities = 51/112 (45%), Positives = 58/112 (51%)
Frame = +1
Query: 1 IATDGLTYFEDXXXXXXXXXXXXXXXKDYDNAIHNKCELDERVFINDEDXXXXXXXXXXX 180
I DGL Y+ED KDYD+AI NK ELDERVFIN+ED
Sbjct: 323 INPDGLIYYEDLMEESSLQSSLNILEKDYDDAIRNKAELDERVFINEEDSLLGSGSVSAG 382
Query: 181 AMNMTSAKRKFDAIASPMKTITXXXXXXXXXXXXTNGFLPGLNVKMAPTPVS 336
++N+T AKRKFD I+SP KTIT NG N KMA TPVS
Sbjct: 383 SLNITGAKRKFDLISSPTKTITSPLSPHRSPASHANGIPGSANSKMAATPVS 434
>ref|XP_002529988.1| conserved hypothetical protein [Ricinus communis]
gi|254789790|sp|B9SVG9.1|RBR_RICCO RecName:
Full=Retinoblastoma-related protein
gi|223530511|gb|EEF32393.1| conserved hypothetical
protein [Ricinus communis]
Length = 1020
Score = 87.4 bits (215), Expect = 2e-15
Identities = 50/112 (44%), Positives = 59/112 (52%)
Frame = +1
Query: 1 IATDGLTYFEDXXXXXXXXXXXXXXXKDYDNAIHNKCELDERVFINDEDXXXXXXXXXXX 180
I TDGL Y+ED KDY++AI K ELDERVFIN+ED
Sbjct: 307 INTDGLIYYEDLMEESSLRSSLDILEKDYEDAIRCKGELDERVFINEEDSLLGSGSLSGG 366
Query: 181 AMNMTSAKRKFDAIASPMKTITXXXXXXXXXXXXTNGFLPGLNVKMAPTPVS 336
A+++T KRKFD I+SP KTIT TNG L N +MA TPVS
Sbjct: 367 AISVTGTKRKFDQISSPTKTITSPLSPHRSPASHTNGILGSTNSRMAATPVS 418
>ref|XP_007010834.1| Retinoblastoma-related 1 [Theobroma cacao]
gi|508727747|gb|EOY19644.1| Retinoblastoma-related 1
[Theobroma cacao]
Length = 1011
Score = 87.0 bits (214), Expect = 2e-15
Identities = 52/112 (46%), Positives = 58/112 (51%)
Frame = +1
Query: 1 IATDGLTYFEDXXXXXXXXXXXXXXXKDYDNAIHNKCELDERVFINDEDXXXXXXXXXXX 180
I TDGL YFE KDYD+AI NK ELDERVFIN+ED
Sbjct: 304 IDTDGLIYFEGLMDEQSLSSSLNILEKDYDDAIRNKGELDERVFINEEDSFLGSGSLFGG 363
Query: 181 AMNMTSAKRKFDAIASPMKTITXXXXXXXXXXXXTNGFLPGLNVKMAPTPVS 336
A N+T KRKFD+IASP KTI+ NG L N K+A TPVS
Sbjct: 364 AGNVTGIKRKFDSIASPSKTISSPLSPHRSPASHGNGVLGPPNAKVAATPVS 415
>emb|CBI20795.3| unnamed protein product [Vitis vinifera]
Length = 1006
Score = 86.3 bits (212), Expect = 4e-15
Identities = 52/112 (46%), Positives = 59/112 (52%)
Frame = +1
Query: 1 IATDGLTYFEDXXXXXXXXXXXXXXXKDYDNAIHNKCELDERVFINDEDXXXXXXXXXXX 180
I DGL YFED KDYD AI NK ELDERVFIN ED
Sbjct: 302 IDPDGLVYFEDLMDESSLSSSINILEKDYDAAIRNKGELDERVFINGEDSLLGSGSLSGG 361
Query: 181 AMNMTSAKRKFDAIASPMKTITXXXXXXXXXXXXTNGFLPGLNVKMAPTPVS 336
AM+++ AKRK D++ASP KTIT + G L G N KMAPTPV+
Sbjct: 362 AMSISGAKRKIDSLASPAKTIT-----SPLSPNRSPGILGGANSKMAPTPVT 408
>ref|XP_002280874.2| PREDICTED: retinoblastoma-related protein-like [Vitis vinifera]
gi|254789791|sp|A7P514.1|RBR_VITVI RecName:
Full=Retinoblastoma-related protein
gi|359392418|gb|AEV45768.1| RBR protein [Vitis
pseudoreticulata]
Length = 1007
Score = 86.3 bits (212), Expect = 4e-15
Identities = 52/112 (46%), Positives = 59/112 (52%)
Frame = +1
Query: 1 IATDGLTYFEDXXXXXXXXXXXXXXXKDYDNAIHNKCELDERVFINDEDXXXXXXXXXXX 180
I DGL YFED KDYD AI NK ELDERVFIN ED
Sbjct: 303 IDPDGLVYFEDLMDESSLSSSINILEKDYDAAIRNKGELDERVFINGEDSLLGSGSLSGG 362
Query: 181 AMNMTSAKRKFDAIASPMKTITXXXXXXXXXXXXTNGFLPGLNVKMAPTPVS 336
AM+++ AKRK D++ASP KTIT + G L G N KMAPTPV+
Sbjct: 363 AMSISGAKRKIDSLASPAKTIT-----SPLSPNRSPGILGGANSKMAPTPVT 409
>ref|XP_004307078.1| PREDICTED: retinoblastoma-related protein-like [Fragaria vesca
subsp. vesca]
Length = 1026
Score = 84.7 bits (208), Expect = 1e-14
Identities = 50/112 (44%), Positives = 59/112 (52%)
Frame = +1
Query: 1 IATDGLTYFEDXXXXXXXXXXXXXXXKDYDNAIHNKCELDERVFINDEDXXXXXXXXXXX 180
I TDGLTYFE KD+D+AI NK ELDERVFIN+ED
Sbjct: 317 IDTDGLTYFEGLLDEPSLSSSLDILEKDHDDAIRNKGELDERVFINEEDTLFGSGSLSGG 376
Query: 181 AMNMTSAKRKFDAIASPMKTITXXXXXXXXXXXXTNGFLPGLNVKMAPTPVS 336
++N++ KRK D++ASP KTIT NG G N KMA TPVS
Sbjct: 377 SLNLSGVKRKVDSMASPTKTITSPLSPHRSPVSQANG---GANSKMAATPVS 425
>ref|XP_003522419.1| PREDICTED: retinoblastoma-related protein 1-like isoform X1
[Glycine max]
Length = 1014
Score = 83.2 bits (204), Expect = 3e-14
Identities = 47/112 (41%), Positives = 56/112 (50%)
Frame = +1
Query: 1 IATDGLTYFEDXXXXXXXXXXXXXXXKDYDNAIHNKCELDERVFINDEDXXXXXXXXXXX 180
I DGLTYF+D KDYD IHNK ELDER+FIN++D
Sbjct: 306 IDKDGLTYFKDLMEESSLPSSLSMLEKDYDYMIHNKSELDERLFINEDDSLLASVSLSGG 365
Query: 181 AMNMTSAKRKFDAIASPMKTITXXXXXXXXXXXXTNGFLPGLNVKMAPTPVS 336
+++ KRKFD++ASP KTIT NG N KMA TPVS
Sbjct: 366 SVSAGGVKRKFDSMASPAKTITSPLSPHRSPASHANGIPGSANSKMAATPVS 417
>ref|XP_006598087.1| PREDICTED: retinoblastoma-related protein 1-like [Glycine max]
Length = 1005
Score = 82.8 bits (203), Expect = 5e-14
Identities = 47/112 (41%), Positives = 57/112 (50%)
Frame = +1
Query: 1 IATDGLTYFEDXXXXXXXXXXXXXXXKDYDNAIHNKCELDERVFINDEDXXXXXXXXXXX 180
I DGLTYF+D KDYD I NK ELDER+FIN++D
Sbjct: 296 IDKDGLTYFKDLMEESSLPSSLNMLEKDYDYMIRNKSELDERLFINEDDSLLASVSLSGG 355
Query: 181 AMNMTSAKRKFDAIASPMKTITXXXXXXXXXXXXTNGFLPGLNVKMAPTPVS 336
++++ KRKFD++ASP KTIT TNG N KMA TPVS
Sbjct: 356 SVSVGGVKRKFDSMASPAKTITSPLSPHRSPTSHTNGIPGSANSKMAATPVS 407
>ref|XP_007220909.1| hypothetical protein PRUPE_ppa000710mg [Prunus persica]
gi|462417371|gb|EMJ22108.1| hypothetical protein
PRUPE_ppa000710mg [Prunus persica]
Length = 1026
Score = 82.8 bits (203), Expect = 5e-14
Identities = 49/109 (44%), Positives = 56/109 (51%)
Frame = +1
Query: 10 DGLTYFEDXXXXXXXXXXXXXXXKDYDNAIHNKCELDERVFINDEDXXXXXXXXXXXAMN 189
DGLTYFE KDYD+AI +K ELDERVFIN+ED +MN
Sbjct: 321 DGLTYFEGLMEEPSLSSSLDILEKDYDDAIRSKGELDERVFINEEDSLLGSRSFSGGSMN 380
Query: 190 MTSAKRKFDAIASPMKTITXXXXXXXXXXXXTNGFLPGLNVKMAPTPVS 336
++ KRK D+IASP KTIT NG G N KM TPVS
Sbjct: 381 LSGVKRKVDSIASPTKTITSPLSPHRSPASHVNG---GANSKMVATPVS 426
>sp|Q2ABE5.1|RBR_CAMSI RecName: Full=Retinoblastoma-related protein
gi|89111303|dbj|BAE80326.1| retinoblastoma related
protein [Camellia sinensis]
Length = 1025
Score = 82.8 bits (203), Expect = 5e-14
Identities = 50/113 (44%), Positives = 59/113 (52%), Gaps = 1/113 (0%)
Frame = +1
Query: 1 IATDGLTYFEDXXXXXXXXXXXXXXXKDYDNAIHNKCELDERVFINDEDXXXXXXXXXXX 180
IATDGL YFED KDY +A NK ELDERVF+N+ED
Sbjct: 313 IATDGLIYFEDLLDDTSLPSSLNILGKDYADATRNKGELDERVFVNEEDSLLGPGSLSGG 372
Query: 181 AMNMTSAKRKFDAIASPMKTITXXXXXXXXXXXXTNGFLP-GLNVKMAPTPVS 336
AMN++ AKRK D+IASP +TIT +P G N KMA TPV+
Sbjct: 373 AMNISGAKRKIDSIASPARTITSPLAPYCSPSASHAKAIPCGSNSKMAATPVT 425
>ref|XP_007201203.1| hypothetical protein PRUPE_ppa001995mg [Prunus persica]
gi|462396603|gb|EMJ02402.1| hypothetical protein
PRUPE_ppa001995mg [Prunus persica]
Length = 731
Score = 81.3 bits (199), Expect = 1e-13
Identities = 48/109 (44%), Positives = 55/109 (50%)
Frame = +1
Query: 10 DGLTYFEDXXXXXXXXXXXXXXXKDYDNAIHNKCELDERVFINDEDXXXXXXXXXXXAMN 189
DGLTYFE KDYD+AI +K ELDERVFIN+ED +MN
Sbjct: 33 DGLTYFEGLMEEPSLSSSLDILEKDYDDAIRSKGELDERVFINEEDSLLGSGSFSGGSMN 92
Query: 190 MTSAKRKFDAIASPMKTITXXXXXXXXXXXXTNGFLPGLNVKMAPTPVS 336
++ KRKFD+IASP K I NG G N KM TPVS
Sbjct: 93 LSGVKRKFDSIASPTKPIASPLSPHHTPASHVNG---GANSKMVATPVS 138
>ref|NP_001266162.1| retinoblastoma-related protein 1 [Solanum lycopersicum]
gi|380710179|gb|AFD98848.1| retinoblastoma-related
protein 1 [Solanum lycopersicum]
Length = 1018
Score = 80.5 bits (197), Expect = 2e-13
Identities = 49/113 (43%), Positives = 58/113 (51%), Gaps = 1/113 (0%)
Frame = +1
Query: 1 IATDGLTYFEDXXXXXXXXXXXXXXXKDYDNAIHNKCELDERVFINDEDXXXXXXXXXXX 180
I DGLTYFE+ KDY++AI NK ELDER+F+NDED
Sbjct: 306 IDADGLTYFENLLEESSLSSSICILEKDYNDAIQNKGELDERIFVNDEDSLLGSGSLSGG 365
Query: 181 AMNMTSAKRKFDAIASPMKTIT-XXXXXXXXXXXXTNGFLPGLNVKMAPTPVS 336
A+NM K+KFDA+ASP KTIT N L N KMA TPV+
Sbjct: 366 AVNMNGIKKKFDAMASPTKTITSPLSPYRSPGASNVNSNLNCGNSKMAATPVT 418
>ref|XP_006594366.1| PREDICTED: retinoblastoma-related protein 1-like [Glycine max]
Length = 1014
Score = 80.1 bits (196), Expect = 3e-13
Identities = 46/112 (41%), Positives = 55/112 (49%)
Frame = +1
Query: 1 IATDGLTYFEDXXXXXXXXXXXXXXXKDYDNAIHNKCELDERVFINDEDXXXXXXXXXXX 180
I DGLTYF+D KDYD I NK ELDER+FIN++D
Sbjct: 306 IDKDGLTYFKDLMEESSLPSSLSMLEKDYDYMIRNKSELDERLFINEDDSLLASVSLSGG 365
Query: 181 AMNMTSAKRKFDAIASPMKTITXXXXXXXXXXXXTNGFLPGLNVKMAPTPVS 336
+++ KRKFD++ASP KTIT NG N KMA TPVS
Sbjct: 366 SVSAGGVKRKFDSMASPAKTITSPLSPHRSPASHANGIPGSANSKMAATPVS 417
>ref|XP_006340923.1| PREDICTED: retinoblastoma-related protein 1-like [Solanum
tuberosum]
Length = 1018
Score = 80.1 bits (196), Expect = 3e-13
Identities = 48/113 (42%), Positives = 57/113 (50%), Gaps = 1/113 (0%)
Frame = +1
Query: 1 IATDGLTYFEDXXXXXXXXXXXXXXXKDYDNAIHNKCELDERVFINDEDXXXXXXXXXXX 180
I DGLTYFE+ KDY++AI NK ELDER+F+NDED
Sbjct: 306 IDADGLTYFENLLEESSLSSSICILEKDYNDAIQNKGELDERIFVNDEDSLLGSGSLSGG 365
Query: 181 AMNMTSAKRKFDAIASPMKTITXXXXXXXXXXXXTNGFLPGL-NVKMAPTPVS 336
A+NM K+KFDA+ASP KTIT P N KMA TPV+
Sbjct: 366 AVNMNGIKKKFDAMASPTKTITSPLSPYRSPGASNVNNNPNCGNSKMAATPVT 418
>sp|Q66WV0.1|RBR1_NICBE RecName: Full=Retinoblastoma-related protein 1; Short=NbRBR1
gi|51538007|gb|AAU05979.1| retinoblastoma protein
[Nicotiana benthamiana]
Length = 1003
Score = 79.7 bits (195), Expect = 4e-13
Identities = 40/80 (50%), Positives = 47/80 (58%)
Frame = +1
Query: 7 TDGLTYFEDXXXXXXXXXXXXXXXKDYDNAIHNKCELDERVFINDEDXXXXXXXXXXXAM 186
TDGLTYFED KDY +AI NK ELDER+F+N+ED A+
Sbjct: 306 TDGLTYFEDLMEESCLSSSVSTLEKDYSDAIQNKGELDERIFVNEEDSLLGSGSLSGGAV 365
Query: 187 NMTSAKRKFDAIASPMKTIT 246
NM KRKFDA+ASP KT+T
Sbjct: 366 NMNGTKRKFDAMASPAKTVT 385