BLASTX nr result
ID: Cocculus22_contig00020267
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus22_contig00020267
(577 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAD22283.1| putative retroelement pol polyprotein [Arabidopsi... 90 4e-16
gb|AAD03367.1| putative retroelement pol polyprotein [Arabidopsi... 90 4e-16
gb|AAF79618.1|AC027665_19 F5M15.26 [Arabidopsis thaliana] 89 8e-16
gb|AAF79254.1|AC023279_3 F12K21.6 [Arabidopsis thaliana] 88 2e-15
ref|XP_006486503.1| PREDICTED: uncharacterized protein LOC102607... 86 5e-15
gb|ABW81060.1| GagPol3 [Arabidopsis lyrata subsp. lyrata] 86 7e-15
emb|CAN75011.1| hypothetical protein VITISV_003559 [Vitis vinifera] 81 2e-13
emb|CAN78857.1| hypothetical protein VITISV_009011 [Vitis vinifera] 81 2e-13
emb|CAN82844.1| hypothetical protein VITISV_005761 [Vitis vinifera] 81 2e-13
emb|CAN79600.1| hypothetical protein VITISV_015420 [Vitis vinifera] 81 2e-13
emb|CAN73595.1| hypothetical protein VITISV_004697 [Vitis vinifera] 81 2e-13
emb|CAN73649.1| hypothetical protein VITISV_036843 [Vitis vinifera] 80 3e-13
emb|CAN78785.1| hypothetical protein VITISV_006286 [Vitis vinifera] 80 5e-13
emb|CAN66183.1| hypothetical protein VITISV_025183 [Vitis vinifera] 80 5e-13
gb|AAF03460.1|AC009992_2 putative reverse transcriptase, 5' part... 80 5e-13
gb|AFU25705.1| gag-pol precursor [Castanea mollissima] 79 7e-13
emb|CAN83045.1| hypothetical protein VITISV_015525 [Vitis vinifera] 79 7e-13
emb|CAN78757.1| hypothetical protein VITISV_035650 [Vitis vinifera] 79 7e-13
emb|CAN76908.1| hypothetical protein VITISV_006597 [Vitis vinifera] 79 7e-13
emb|CAN63296.1| hypothetical protein VITISV_036894 [Vitis vinifera] 79 7e-13
>gb|AAD22283.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1787
Score = 90.1 bits (222), Expect = 4e-16
Identities = 42/81 (51%), Positives = 56/81 (69%)
Frame = +1
Query: 1 KQKISKYYNAKVKPRTLRVGDLVLRKVMLNTKEVGVGTLGSTWEGPYKIIAILRPGVYKL 180
+Q +K+YN KVK R GDLVLRKV NT E G LG+ WEGPY I +++PGVY+L
Sbjct: 1706 QQAAAKFYNKKVKNRLFAEGDLVLRKVFENTVEQDAGKLGAHWEGPYLISKVVKPGVYEL 1765
Query: 181 *DLEGRVIPKAWNTEHLKIYY 243
++G IP++WN+ +LK YY
Sbjct: 1766 LTMDGTPIPRSWNSANLKRYY 1786
>gb|AAD03367.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1329
Score = 90.1 bits (222), Expect = 4e-16
Identities = 39/77 (50%), Positives = 56/77 (72%)
Frame = +1
Query: 13 SKYYNAKVKPRTLRVGDLVLRKVMLNTKEVGVGTLGSTWEGPYKIIAILRPGVYKL*DLE 192
++YYN+ V+ R+ VG LVLR+V N E G G LG +WEGPYKI ++R GVY+L ++E
Sbjct: 1252 ARYYNSNVRNRSFEVGTLVLRRVQQNKAEKGAGKLGISWEGPYKITHVVRNGVYRLINME 1311
Query: 193 GRVIPKAWNTEHLKIYY 243
G+ + +AWN+ HLK +Y
Sbjct: 1312 GKTVRRAWNSMHLKRFY 1328
>gb|AAF79618.1|AC027665_19 F5M15.26 [Arabidopsis thaliana]
Length = 1838
Score = 89.0 bits (219), Expect = 8e-16
Identities = 40/77 (51%), Positives = 52/77 (67%)
Frame = +1
Query: 13 SKYYNAKVKPRTLRVGDLVLRKVMLNTKEVGVGTLGSTWEGPYKIIAILRPGVYKL*DLE 192
+K+YN KV R VGDLVLRKV NT E+ G LG+ WEG Y++ I+RPG Y+L +
Sbjct: 1761 AKHYNQKVHNRHFDVGDLVLRKVFENTAEINAGKLGANWEGSYQVSKIVRPGDYELLTMS 1820
Query: 193 GRVIPKAWNTEHLKIYY 243
G +P+ WN+ HLK YY
Sbjct: 1821 GTAVPRTWNSMHLKRYY 1837
>gb|AAF79254.1|AC023279_3 F12K21.6 [Arabidopsis thaliana]
Length = 755
Score = 87.8 bits (216), Expect = 2e-15
Identities = 38/79 (48%), Positives = 54/79 (68%)
Frame = +1
Query: 7 KISKYYNAKVKPRTLRVGDLVLRKVMLNTKEVGVGTLGSTWEGPYKIIAILRPGVYKL*D 186
+++++YN+ V+ R GD VL+KV NT E G LG+ WEGPY I I+RP VY+L D
Sbjct: 676 EMARHYNSNVRQRRFHEGDRVLQKVFQNTAEPNTGKLGTNWEGPYLISKIVRPEVYELAD 735
Query: 187 LEGRVIPKAWNTEHLKIYY 243
L G+ +P++WN HL+ YY
Sbjct: 736 LSGKAVPRSWNAMHLRKYY 754
>ref|XP_006486503.1| PREDICTED: uncharacterized protein LOC102607673 [Citrus sinensis]
Length = 1866
Score = 86.3 bits (212), Expect = 5e-15
Identities = 38/81 (46%), Positives = 52/81 (64%)
Frame = +1
Query: 1 KQKISKYYNAKVKPRTLRVGDLVLRKVMLNTKEVGVGTLGSTWEGPYKIIAILRPGVYKL 180
+Q++ +YYN V+ R R GD VLR+V NT+ G LG WEGPY++I PG YKL
Sbjct: 1785 QQRVMRYYNKNVRVRQFRAGDWVLRRVNQNTRNPNHGALGPKWEGPYRVIRATGPGAYKL 1844
Query: 181 *DLEGRVIPKAWNTEHLKIYY 243
+GR + ++WN EHLK Y+
Sbjct: 1845 AYQDGRDVKRSWNAEHLKKYF 1865
>gb|ABW81060.1| GagPol3 [Arabidopsis lyrata subsp. lyrata]
Length = 1103
Score = 85.9 bits (211), Expect = 7e-15
Identities = 41/81 (50%), Positives = 53/81 (65%)
Frame = +1
Query: 1 KQKISKYYNAKVKPRTLRVGDLVLRKVMLNTKEVGVGTLGSTWEGPYKIIAILRPGVYKL 180
+Q ++YYN+KVK R VGD VLR+V N KE G G LG WEGPY I ++R GVY+L
Sbjct: 1022 QQAAARYYNSKVKSRPFFVGDYVLRRVFDNKKEEGAGKLGINWEGPYIITEVVRNGVYRL 1081
Query: 181 *DLEGRVIPKAWNTEHLKIYY 243
DLE + + WN +LK +Y
Sbjct: 1082 KDLEDNPVKRPWNVINLKKFY 1102
>emb|CAN75011.1| hypothetical protein VITISV_003559 [Vitis vinifera]
Length = 984
Score = 81.3 bits (199), Expect = 2e-13
Identities = 39/81 (48%), Positives = 50/81 (61%)
Frame = +1
Query: 1 KQKISKYYNAKVKPRTLRVGDLVLRKVMLNTKEVGVGTLGSTWEGPYKIIAILRPGVYKL 180
+Q+ S +YN KV+PR L+ G LVLRKV NT EVGVG + WEGPY + G Y L
Sbjct: 903 QQRASAHYNRKVRPRNLKNGTLVLRKVFENTTEVGVGKFQANWEGPYMVSKASENGAYHL 962
Query: 181 *DLEGRVIPKAWNTEHLKIYY 243
L+G + + WN +LK YY
Sbjct: 963 QKLDGTPLLRPWNVSNLKQYY 983
>emb|CAN78857.1| hypothetical protein VITISV_009011 [Vitis vinifera]
Length = 1027
Score = 80.9 bits (198), Expect = 2e-13
Identities = 38/81 (46%), Positives = 50/81 (61%)
Frame = +1
Query: 1 KQKISKYYNAKVKPRTLRVGDLVLRKVMLNTKEVGVGTLGSTWEGPYKIIAILRPGVYKL 180
+Q++S +YN KVKPR+ + G LVLRKV NT EVG G + WEGPY + G Y L
Sbjct: 946 QQRVSAHYNRKVKPRSFKNGTLVLRKVFENTTEVGAGKFQANWEGPYIVSKASESGAYHL 1005
Query: 181 *DLEGRVIPKAWNTEHLKIYY 243
L+G + + WN +LK YY
Sbjct: 1006 QKLDGTPLLRPWNVSNLKQYY 1026
>emb|CAN82844.1| hypothetical protein VITISV_005761 [Vitis vinifera]
Length = 896
Score = 80.9 bits (198), Expect = 2e-13
Identities = 39/81 (48%), Positives = 51/81 (62%)
Frame = +1
Query: 1 KQKISKYYNAKVKPRTLRVGDLVLRKVMLNTKEVGVGTLGSTWEGPYKIIAILRPGVYKL 180
+Q+ S +YN KVKPR+ + G LVLRKV NT E+GVG L + WEGPY + G Y L
Sbjct: 815 QQRASAHYNRKVKPRSFKNGTLVLRKVFENTTEMGVGKLYANWEGPYIVSKASESGAYHL 874
Query: 181 *DLEGRVIPKAWNTEHLKIYY 243
L+G + + WN +LK YY
Sbjct: 875 QKLDGTPLLRPWNVSNLKQYY 895
>emb|CAN79600.1| hypothetical protein VITISV_015420 [Vitis vinifera]
Length = 928
Score = 80.9 bits (198), Expect = 2e-13
Identities = 39/81 (48%), Positives = 50/81 (61%)
Frame = +1
Query: 1 KQKISKYYNAKVKPRTLRVGDLVLRKVMLNTKEVGVGTLGSTWEGPYKIIAILRPGVYKL 180
+Q+ S +YN KVKPR+ + G LVLRKV NT EVGVG + WEGPY + G Y L
Sbjct: 847 QQRASAHYNRKVKPRSFKNGTLVLRKVFENTAEVGVGKFQANWEGPYIVSKASESGAYHL 906
Query: 181 *DLEGRVIPKAWNTEHLKIYY 243
L+G + + WN +LK YY
Sbjct: 907 QKLDGTPLLRPWNVSNLKQYY 927
>emb|CAN73595.1| hypothetical protein VITISV_004697 [Vitis vinifera]
Length = 870
Score = 80.9 bits (198), Expect = 2e-13
Identities = 39/81 (48%), Positives = 51/81 (62%)
Frame = +1
Query: 1 KQKISKYYNAKVKPRTLRVGDLVLRKVMLNTKEVGVGTLGSTWEGPYKIIAILRPGVYKL 180
+Q+ S +YN KVKPR+L+ G LVLRKV NT E+G G L + WEGPY + G Y L
Sbjct: 789 QQRASAHYNRKVKPRSLKNGTLVLRKVFENTAEMGAGKLQANWEGPYIVSKASESGAYHL 848
Query: 181 *DLEGRVIPKAWNTEHLKIYY 243
L+G + + WN +LK YY
Sbjct: 849 QKLDGTPLLRPWNMSNLKQYY 869
>emb|CAN73649.1| hypothetical protein VITISV_036843 [Vitis vinifera]
Length = 996
Score = 80.5 bits (197), Expect = 3e-13
Identities = 39/81 (48%), Positives = 50/81 (61%)
Frame = +1
Query: 1 KQKISKYYNAKVKPRTLRVGDLVLRKVMLNTKEVGVGTLGSTWEGPYKIIAILRPGVYKL 180
+Q++S +YN KV+PRT + G LVLRKV NT EVGVG + WEGPY + G Y L
Sbjct: 915 QQRVSAHYNRKVRPRTFKNGTLVLRKVFENTIEVGVGKFQANWEGPYIVSKASNNGAYHL 974
Query: 181 *DLEGRVIPKAWNTEHLKIYY 243
L+G + WN +LK YY
Sbjct: 975 QKLDGTPLLTPWNVSNLKQYY 995
>emb|CAN78785.1| hypothetical protein VITISV_006286 [Vitis vinifera]
Length = 978
Score = 79.7 bits (195), Expect = 5e-13
Identities = 37/81 (45%), Positives = 50/81 (61%)
Frame = +1
Query: 1 KQKISKYYNAKVKPRTLRVGDLVLRKVMLNTKEVGVGTLGSTWEGPYKIIAILRPGVYKL 180
+Q+ S YN KVKPR+ + G LVLRKV NT E+G G + WEGPY + G Y L
Sbjct: 897 QQRASANYNRKVKPRSFKNGTLVLRKVFENTTEIGAGKFQANWEGPYIVXKASESGAYHL 956
Query: 181 *DLEGRVIPKAWNTEHLKIYY 243
+L+G ++ + WN +LK YY
Sbjct: 957 QNLDGTLLLRPWNVSNLKQYY 977
>emb|CAN66183.1| hypothetical protein VITISV_025183 [Vitis vinifera]
Length = 987
Score = 79.7 bits (195), Expect = 5e-13
Identities = 38/81 (46%), Positives = 49/81 (60%)
Frame = +1
Query: 1 KQKISKYYNAKVKPRTLRVGDLVLRKVMLNTKEVGVGTLGSTWEGPYKIIAILRPGVYKL 180
+Q+ S +YN KVKPR+ + G LVLRKV NT EVG G + WEGPY + G Y L
Sbjct: 906 QQRASAHYNRKVKPRSFKNGTLVLRKVFENTAEVGAGKFQANWEGPYIVSKASESGAYHL 965
Query: 181 *DLEGRVIPKAWNTEHLKIYY 243
L+G + + WN +LK YY
Sbjct: 966 QKLDGTPLLRTWNVSNLKQYY 986
>gb|AAF03460.1|AC009992_2 putative reverse transcriptase, 5' partial [Arabidopsis thaliana]
Length = 177
Score = 79.7 bits (195), Expect = 5e-13
Identities = 36/81 (44%), Positives = 52/81 (64%)
Frame = +1
Query: 1 KQKISKYYNAKVKPRTLRVGDLVLRKVMLNTKEVGVGTLGSTWEGPYKIIAILRPGVYKL 180
+Q ++YYN+K+ R +GD VL++V N KE G G LG WEGPY + ++R GV+ L
Sbjct: 96 QQAAARYYNSKINSRPFFMGDYVLKRVFDNKKEEGAGKLGINWEGPYIVTEVVRNGVFGL 155
Query: 181 *DLEGRVIPKAWNTEHLKIYY 243
DLE R + + WN +LK +Y
Sbjct: 156 KDLEDRPVKRPWNMVNLKKFY 176
>gb|AFU25705.1| gag-pol precursor [Castanea mollissima]
Length = 1106
Score = 79.3 bits (194), Expect = 7e-13
Identities = 37/81 (45%), Positives = 53/81 (65%)
Frame = +1
Query: 1 KQKISKYYNAKVKPRTLRVGDLVLRKVMLNTKEVGVGTLGSTWEGPYKIIAILRPGVYKL 180
+QK+ + Y+ VK R L GDLVLRKV+ + G LG+ WEGPY+I ++ G Y+L
Sbjct: 1025 QQKLKQAYDKGVKSRPLVPGDLVLRKVVGTARNPAWGKLGTNWEGPYRITSVAGIGAYRL 1084
Query: 181 *DLEGRVIPKAWNTEHLKIYY 243
DL+GRV+ + WN +L+ YY
Sbjct: 1085 EDLDGRVVHRPWNVNNLRRYY 1105
>emb|CAN83045.1| hypothetical protein VITISV_015525 [Vitis vinifera]
Length = 873
Score = 79.3 bits (194), Expect = 7e-13
Identities = 38/81 (46%), Positives = 49/81 (60%)
Frame = +1
Query: 1 KQKISKYYNAKVKPRTLRVGDLVLRKVMLNTKEVGVGTLGSTWEGPYKIIAILRPGVYKL 180
+QK S +YN KV+PR+ + G LVLRKV NT EVG G + WEGPY + G Y L
Sbjct: 792 QQKASAHYNCKVRPRSFKNGTLVLRKVFENTTEVGAGKFQANWEGPYIVSKASNNGAYHL 851
Query: 181 *DLEGRVIPKAWNTEHLKIYY 243
L+G + + WN +LK YY
Sbjct: 852 QKLDGTPLLRPWNVSNLKQYY 872
>emb|CAN78757.1| hypothetical protein VITISV_035650 [Vitis vinifera]
Length = 888
Score = 79.3 bits (194), Expect = 7e-13
Identities = 38/81 (46%), Positives = 49/81 (60%)
Frame = +1
Query: 1 KQKISKYYNAKVKPRTLRVGDLVLRKVMLNTKEVGVGTLGSTWEGPYKIIAILRPGVYKL 180
+Q+ S +YN KVKPR+ + G LVLRKV NT EVG G + WEGPY + G Y L
Sbjct: 807 QQRASAHYNRKVKPRSFKNGTLVLRKVFENTAEVGAGKFQANWEGPYIVSKASESGAYHL 866
Query: 181 *DLEGRVIPKAWNTEHLKIYY 243
L+G + + WN +LK YY
Sbjct: 867 QKLDGTPLLRPWNVSNLKQYY 887
>emb|CAN76908.1| hypothetical protein VITISV_006597 [Vitis vinifera]
Length = 931
Score = 79.3 bits (194), Expect = 7e-13
Identities = 38/81 (46%), Positives = 49/81 (60%)
Frame = +1
Query: 1 KQKISKYYNAKVKPRTLRVGDLVLRKVMLNTKEVGVGTLGSTWEGPYKIIAILRPGVYKL 180
+Q+ S +YN KVKPR+ + G LVLRKV NT EVG G + WEGPY + G Y L
Sbjct: 850 QQRASAHYNRKVKPRSFKNGTLVLRKVFENTAEVGAGKFQANWEGPYIVSKASESGAYHL 909
Query: 181 *DLEGRVIPKAWNTEHLKIYY 243
L+G + + WN +LK YY
Sbjct: 910 QKLDGTPLLRPWNVSNLKQYY 930
>emb|CAN63296.1| hypothetical protein VITISV_036894 [Vitis vinifera]
Length = 828
Score = 79.3 bits (194), Expect = 7e-13
Identities = 38/81 (46%), Positives = 50/81 (61%)
Frame = +1
Query: 1 KQKISKYYNAKVKPRTLRVGDLVLRKVMLNTKEVGVGTLGSTWEGPYKIIAILRPGVYKL 180
+Q+ + YYN KV+PR +VG L+LRKV NT E GVG L + WEGPY + G Y L
Sbjct: 747 QQRAAAYYNYKVRPRASKVGTLILRKVFENTVEKGVGKLQANWEGPYIVSKAGETGAYHL 806
Query: 181 *DLEGRVIPKAWNTEHLKIYY 243
L+G + + WN +LK YY
Sbjct: 807 QKLDGMPLLRLWNVSNLKRYY 827