BLASTX nr result
ID: Cocculus22_contig00020239
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus22_contig00020239
(277 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EEE61245.1| hypothetical protein OsJ_15297 [Oryza sativa Japo... 140 1e-31
ref|NP_001053175.1| Os04g0492300 [Oryza sativa Japonica Group] g... 140 1e-31
ref|XP_004166766.1| PREDICTED: DNA-directed RNA polymerase III s... 140 2e-31
ref|XP_004148776.1| PREDICTED: DNA-directed RNA polymerase III s... 140 2e-31
ref|XP_003574945.1| PREDICTED: DNA-directed RNA polymerase III s... 140 2e-31
ref|XP_006653556.1| PREDICTED: DNA-directed RNA polymerase III s... 139 4e-31
ref|XP_006488216.1| PREDICTED: DNA-directed RNA polymerase III s... 137 2e-30
ref|XP_007036220.1| DNA-directed RNA polymerase [Theobroma cacao... 137 2e-30
ref|XP_002446717.1| hypothetical protein SORBIDRAFT_06g021120 [S... 136 3e-30
tpg|DAA37181.1| TPA: putative DNA-directed RNA polymerase family... 136 3e-30
emb|CBI16226.3| unnamed protein product [Vitis vinifera] 135 8e-30
ref|XP_002284657.1| PREDICTED: DNA-directed RNA polymerase III s... 135 8e-30
gb|EXB53230.1| DNA-directed RNA polymerase III subunit RPC1 [Mor... 133 3e-29
ref|XP_006365152.1| PREDICTED: DNA-directed RNA polymerase III s... 132 4e-29
ref|XP_006365151.1| PREDICTED: DNA-directed RNA polymerase III s... 132 4e-29
ref|XP_004251448.1| PREDICTED: DNA-directed RNA polymerase III s... 132 4e-29
gb|EMT01541.1| DNA-directed RNA polymerase III subunit RPC1 [Aeg... 130 2e-28
ref|XP_004976057.1| PREDICTED: DNA-directed RNA polymerase III s... 129 3e-28
gb|EPS62830.1| hypothetical protein M569_11956, partial [Genlise... 129 5e-28
ref|XP_006424701.1| hypothetical protein CICLE_v10027681mg [Citr... 128 7e-28
>gb|EEE61245.1| hypothetical protein OsJ_15297 [Oryza sativa Japonica Group]
Length = 1321
Score = 140 bits (354), Expect = 1e-31
Identities = 62/91 (68%), Positives = 75/91 (82%)
Frame = -1
Query: 277 LDPHMGPANKGGTCATCHGNFTSCPGHFGYLNLALPVFNVGYFNSLIDILKSICKSCARI 98
LD MG ANK G C+TCHG+F CPGHFGYL LALPVFNVG+FN ++D+LK ICKSC+R+
Sbjct: 63 LDTRMGAANKLGECSTCHGSFAECPGHFGYLKLALPVFNVGFFNCILDVLKCICKSCSRV 122
Query: 97 LLPEKDRVECLKKMRNPKLEALQKSGLAKQI 5
LL EKDR+E LKKMRNPK + LQKS + K++
Sbjct: 123 LLMEKDRLEFLKKMRNPKADPLQKSAIMKKV 153
>ref|NP_001053175.1| Os04g0492300 [Oryza sativa Japonica Group]
gi|38346223|emb|CAE02045.2| OJ990528_30.3 [Oryza sativa
Japonica Group] gi|38347455|emb|CAD41360.2|
OSJNBa0076N16.24 [Oryza sativa Japonica Group]
gi|113564746|dbj|BAF15089.1| Os04g0492300 [Oryza sativa
Japonica Group] gi|116310339|emb|CAH67354.1|
OSIGBa0130B08.14 [Oryza sativa Indica Group]
gi|116310740|emb|CAH67535.1| H0425E08.3 [Oryza sativa
Indica Group] gi|215768005|dbj|BAH00234.1| unnamed
protein product [Oryza sativa Japonica Group]
gi|218195112|gb|EEC77539.1| hypothetical protein
OsI_16437 [Oryza sativa Indica Group]
Length = 1383
Score = 140 bits (354), Expect = 1e-31
Identities = 62/91 (68%), Positives = 75/91 (82%)
Frame = -1
Query: 277 LDPHMGPANKGGTCATCHGNFTSCPGHFGYLNLALPVFNVGYFNSLIDILKSICKSCARI 98
LD MG ANK G C+TCHG+F CPGHFGYL LALPVFNVG+FN ++D+LK ICKSC+R+
Sbjct: 63 LDTRMGAANKLGECSTCHGSFAECPGHFGYLKLALPVFNVGFFNCILDVLKCICKSCSRV 122
Query: 97 LLPEKDRVECLKKMRNPKLEALQKSGLAKQI 5
LL EKDR+E LKKMRNPK + LQKS + K++
Sbjct: 123 LLMEKDRLEFLKKMRNPKADPLQKSAIMKKV 153
>ref|XP_004166766.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like,
partial [Cucumis sativus]
Length = 286
Score = 140 bits (352), Expect = 2e-31
Identities = 64/92 (69%), Positives = 76/92 (82%)
Frame = -1
Query: 277 LDPHMGPANKGGTCATCHGNFTSCPGHFGYLNLALPVFNVGYFNSLIDILKSICKSCARI 98
LDP MGPANKG CATCH NF CPGH+GY+NLALPVFNVGYF ++++ILK ICKSC+RI
Sbjct: 62 LDPRMGPANKGCKCATCHANFGDCPGHYGYVNLALPVFNVGYFTTILEILKCICKSCSRI 121
Query: 97 LLPEKDRVECLKKMRNPKLEALQKSGLAKQIV 2
LL EK + L+KMRNPKLEAL+K L K+I+
Sbjct: 122 LLEEKLFKDFLRKMRNPKLEALRKVDLVKKII 153
>ref|XP_004148776.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like
[Cucumis sativus]
Length = 1400
Score = 140 bits (352), Expect = 2e-31
Identities = 64/92 (69%), Positives = 76/92 (82%)
Frame = -1
Query: 277 LDPHMGPANKGGTCATCHGNFTSCPGHFGYLNLALPVFNVGYFNSLIDILKSICKSCARI 98
LDP MGPANKG CATCH NF CPGH+GY+NLALPVFNVGYF ++++ILK ICKSC+RI
Sbjct: 64 LDPRMGPANKGCKCATCHANFGDCPGHYGYVNLALPVFNVGYFTTILEILKCICKSCSRI 123
Query: 97 LLPEKDRVECLKKMRNPKLEALQKSGLAKQIV 2
LL EK + L+KMRNPKLEAL+K L K+I+
Sbjct: 124 LLEEKLFKDFLRKMRNPKLEALRKVDLVKKII 155
>ref|XP_003574945.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like
[Brachypodium distachyon]
Length = 1392
Score = 140 bits (352), Expect = 2e-31
Identities = 62/91 (68%), Positives = 75/91 (82%)
Frame = -1
Query: 277 LDPHMGPANKGGTCATCHGNFTSCPGHFGYLNLALPVFNVGYFNSLIDILKSICKSCARI 98
LDP MG ANK G CATCHG++ CPGHFGYL L LPVFNVG+FN+++D+LKSICK C+RI
Sbjct: 63 LDPRMGAANKFGECATCHGSYHECPGHFGYLKLVLPVFNVGFFNNILDVLKSICKGCSRI 122
Query: 97 LLPEKDRVECLKKMRNPKLEALQKSGLAKQI 5
LL EKD+ E LKKMRNP+LE L K+ L K++
Sbjct: 123 LLHEKDQREFLKKMRNPRLEPLHKAALMKKV 153
>ref|XP_006653556.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like [Oryza
brachyantha]
Length = 1389
Score = 139 bits (350), Expect = 4e-31
Identities = 61/91 (67%), Positives = 74/91 (81%)
Frame = -1
Query: 277 LDPHMGPANKGGTCATCHGNFTSCPGHFGYLNLALPVFNVGYFNSLIDILKSICKSCARI 98
LD MG ANK G C+TCHG+F CPGHFGYL LALPVFNVG+FN ++D+LK ICK C+R+
Sbjct: 63 LDTRMGAANKLGECSTCHGSFAECPGHFGYLKLALPVFNVGFFNCILDVLKCICKGCSRV 122
Query: 97 LLPEKDRVECLKKMRNPKLEALQKSGLAKQI 5
LL EKDR+E LKKMRNPK + LQKS + K++
Sbjct: 123 LLVEKDRLEFLKKMRNPKADPLQKSAIMKKV 153
>ref|XP_006488216.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like
isoform X1 [Citrus sinensis]
gi|568870034|ref|XP_006488217.1| PREDICTED: DNA-directed
RNA polymerase III subunit rpc1-like isoform X2 [Citrus
sinensis]
Length = 1404
Score = 137 bits (344), Expect = 2e-30
Identities = 62/92 (67%), Positives = 76/92 (82%)
Frame = -1
Query: 277 LDPHMGPANKGGTCATCHGNFTSCPGHFGYLNLALPVFNVGYFNSLIDILKSICKSCARI 98
LDP MGPANK TCATCHG F++CPGH+GYL LALPV+NVGY ++++DILK ICK C+R+
Sbjct: 67 LDPRMGPANKSCTCATCHGGFSNCPGHYGYLTLALPVYNVGYLSTILDILKCICKYCSRL 126
Query: 97 LLPEKDRVECLKKMRNPKLEALQKSGLAKQIV 2
LL EK + LKKMRNPK+EAL+K+ L K IV
Sbjct: 127 LLEEKLCKDYLKKMRNPKMEALRKTDLMKSIV 158
>ref|XP_007036220.1| DNA-directed RNA polymerase [Theobroma cacao]
gi|508773465|gb|EOY20721.1| DNA-directed RNA polymerase
[Theobroma cacao]
Length = 1395
Score = 137 bits (344), Expect = 2e-30
Identities = 60/92 (65%), Positives = 76/92 (82%)
Frame = -1
Query: 277 LDPHMGPANKGGTCATCHGNFTSCPGHFGYLNLALPVFNVGYFNSLIDILKSICKSCARI 98
LDP MGPANK G CATCHGNF CPGH+GYL+LALPV+NVGY ++++DILK ICKSC+RI
Sbjct: 58 LDPRMGPANKSGKCATCHGNFADCPGHYGYLSLALPVYNVGYLSTILDILKCICKSCSRI 117
Query: 97 LLPEKDRVECLKKMRNPKLEALQKSGLAKQIV 2
+L EK + LK+MR+PK++AL+K + K IV
Sbjct: 118 ILDEKLCKDYLKRMRSPKIDALKKGDIMKSIV 149
>ref|XP_002446717.1| hypothetical protein SORBIDRAFT_06g021120 [Sorghum bicolor]
gi|241937900|gb|EES11045.1| hypothetical protein
SORBIDRAFT_06g021120 [Sorghum bicolor]
Length = 1391
Score = 136 bits (343), Expect = 3e-30
Identities = 61/91 (67%), Positives = 73/91 (80%)
Frame = -1
Query: 277 LDPHMGPANKGGTCATCHGNFTSCPGHFGYLNLALPVFNVGYFNSLIDILKSICKSCARI 98
LDP MG NK C+TCHG F+ CPGHFGYL LALPVFNVG+FN ++D+LK ICKSC+R+
Sbjct: 63 LDPRMGVPNKREKCSTCHGEFSDCPGHFGYLKLALPVFNVGFFNCILDVLKCICKSCSRV 122
Query: 97 LLPEKDRVECLKKMRNPKLEALQKSGLAKQI 5
LL EKDR E LKKMRNP+ +ALQKS K++
Sbjct: 123 LLFEKDRREFLKKMRNPRADALQKSATMKKV 153
>tpg|DAA37181.1| TPA: putative DNA-directed RNA polymerase family protein [Zea mays]
Length = 1030
Score = 136 bits (342), Expect = 3e-30
Identities = 61/91 (67%), Positives = 72/91 (79%)
Frame = -1
Query: 277 LDPHMGPANKGGTCATCHGNFTSCPGHFGYLNLALPVFNVGYFNSLIDILKSICKSCARI 98
LDP MG K G C TCHG F+ CPGHFGYL LALPVFNVG+FN ++D+LK ICKSC+R+
Sbjct: 63 LDPRMGIPTKRGKCNTCHGEFSDCPGHFGYLKLALPVFNVGFFNCILDVLKCICKSCSRV 122
Query: 97 LLPEKDRVECLKKMRNPKLEALQKSGLAKQI 5
LL EKDR E LKKMRNP+ +ALQKS K++
Sbjct: 123 LLIEKDRREFLKKMRNPRADALQKSATMKKV 153
>emb|CBI16226.3| unnamed protein product [Vitis vinifera]
Length = 1819
Score = 135 bits (339), Expect = 8e-30
Identities = 62/92 (67%), Positives = 75/92 (81%)
Frame = -1
Query: 277 LDPHMGPANKGGTCATCHGNFTSCPGHFGYLNLALPVFNVGYFNSLIDILKSICKSCARI 98
LDP MGPANK GTCATC GNF CPGH GYL LALPV+NVGY ++++DILK ICKSC+R+
Sbjct: 60 LDPRMGPANKNGTCATCLGNFRDCPGHCGYLTLALPVYNVGYLSTIVDILKCICKSCSRV 119
Query: 97 LLPEKDRVECLKKMRNPKLEALQKSGLAKQIV 2
LL EK + LKKMR+ K+EAL+K+ L K+IV
Sbjct: 120 LLDEKASKDYLKKMRSQKMEALKKAELMKKIV 151
>ref|XP_002284657.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like [Vitis
vinifera]
Length = 1383
Score = 135 bits (339), Expect = 8e-30
Identities = 62/92 (67%), Positives = 75/92 (81%)
Frame = -1
Query: 277 LDPHMGPANKGGTCATCHGNFTSCPGHFGYLNLALPVFNVGYFNSLIDILKSICKSCARI 98
LDP MGPANK GTCATC GNF CPGH GYL LALPV+NVGY ++++DILK ICKSC+R+
Sbjct: 60 LDPRMGPANKNGTCATCLGNFRDCPGHCGYLTLALPVYNVGYLSTIVDILKCICKSCSRV 119
Query: 97 LLPEKDRVECLKKMRNPKLEALQKSGLAKQIV 2
LL EK + LKKMR+ K+EAL+K+ L K+IV
Sbjct: 120 LLDEKASKDYLKKMRSQKMEALKKAELMKKIV 151
>gb|EXB53230.1| DNA-directed RNA polymerase III subunit RPC1 [Morus notabilis]
Length = 232
Score = 133 bits (334), Expect = 3e-29
Identities = 61/92 (66%), Positives = 74/92 (80%)
Frame = -1
Query: 277 LDPHMGPANKGGTCATCHGNFTSCPGHFGYLNLALPVFNVGYFNSLIDILKSICKSCARI 98
LDP MGPANK CATCHG F+ CPGH+GYL LALPV+NVGY ++++DILK ICKSC+RI
Sbjct: 66 LDPRMGPANKFSECATCHGRFSDCPGHYGYLKLALPVYNVGYLSTILDILKCICKSCSRI 125
Query: 97 LLPEKDRVECLKKMRNPKLEALQKSGLAKQIV 2
LL EK R + LKKMR+ K+E L+K L K+IV
Sbjct: 126 LLDEKLRKDFLKKMRSSKMEPLKKGELMKKIV 157
>ref|XP_006365152.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like
isoform X2 [Solanum tuberosum]
Length = 1243
Score = 132 bits (333), Expect = 4e-29
Identities = 59/92 (64%), Positives = 72/92 (78%)
Frame = -1
Query: 277 LDPHMGPANKGGTCATCHGNFTSCPGHFGYLNLALPVFNVGYFNSLIDILKSICKSCARI 98
LDP MGP NK G C TCHGNF CPGH+GYL LALPV+NVGY +++DILK ICK C+ I
Sbjct: 63 LDPRMGPPNKNGCCETCHGNFRECPGHYGYLVLALPVYNVGYLGTVVDILKCICKCCSSI 122
Query: 97 LLPEKDRVECLKKMRNPKLEALQKSGLAKQIV 2
LL +K+R + LKKMRNP+ E L+KS L K++V
Sbjct: 123 LLDDKERRDILKKMRNPRTEFLKKSELHKKVV 154
>ref|XP_006365151.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like
isoform X1 [Solanum tuberosum]
Length = 1394
Score = 132 bits (333), Expect = 4e-29
Identities = 59/92 (64%), Positives = 72/92 (78%)
Frame = -1
Query: 277 LDPHMGPANKGGTCATCHGNFTSCPGHFGYLNLALPVFNVGYFNSLIDILKSICKSCARI 98
LDP MGP NK G C TCHGNF CPGH+GYL LALPV+NVGY +++DILK ICK C+ I
Sbjct: 63 LDPRMGPPNKNGCCETCHGNFRECPGHYGYLVLALPVYNVGYLGTVVDILKCICKCCSSI 122
Query: 97 LLPEKDRVECLKKMRNPKLEALQKSGLAKQIV 2
LL +K+R + LKKMRNP+ E L+KS L K++V
Sbjct: 123 LLDDKERRDILKKMRNPRTEFLKKSELHKKVV 154
>ref|XP_004251448.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like
[Solanum lycopersicum]
Length = 1390
Score = 132 bits (333), Expect = 4e-29
Identities = 59/92 (64%), Positives = 72/92 (78%)
Frame = -1
Query: 277 LDPHMGPANKGGTCATCHGNFTSCPGHFGYLNLALPVFNVGYFNSLIDILKSICKSCARI 98
LDP MGP NK G C TCHGNF CPGH+GYL LALPV+NVGY +++DILK ICK C+ I
Sbjct: 63 LDPRMGPPNKSGCCETCHGNFRECPGHYGYLVLALPVYNVGYLGTVVDILKCICKCCSSI 122
Query: 97 LLPEKDRVECLKKMRNPKLEALQKSGLAKQIV 2
LL +K+R + LKKMRNP+ E L+KS L K++V
Sbjct: 123 LLDDKERRDILKKMRNPRTEFLKKSELHKRVV 154
>gb|EMT01541.1| DNA-directed RNA polymerase III subunit RPC1 [Aegilops tauschii]
Length = 1117
Score = 130 bits (327), Expect = 2e-28
Identities = 57/90 (63%), Positives = 70/90 (77%)
Frame = -1
Query: 277 LDPHMGPANKGGTCATCHGNFTSCPGHFGYLNLALPVFNVGYFNSLIDILKSICKSCARI 98
LD MG ANK G C TCHG++T CPGHFGYL LALPVFN+G+FN+++D++K ICK C+R+
Sbjct: 37 LDTRMGAANKQGECGTCHGSYTECPGHFGYLKLALPVFNIGFFNNILDVVKCICKGCSRV 96
Query: 97 LLPEKDRVECLKKMRNPKLEALQKSGLAKQ 8
LL EKDR E LKKMR P+ E L K L K+
Sbjct: 97 LLVEKDRREFLKKMRQPRAEPLVKFALMKK 126
>ref|XP_004976057.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like
[Setaria italica]
Length = 1397
Score = 129 bits (325), Expect = 3e-28
Identities = 60/94 (63%), Positives = 73/94 (77%), Gaps = 3/94 (3%)
Frame = -1
Query: 277 LDPHMGPANKGGT---CATCHGNFTSCPGHFGYLNLALPVFNVGYFNSLIDILKSICKSC 107
LD MG A+K T C+TCHG F CPGHFGYL LALPVFNVG+FN ++D+LK ICK C
Sbjct: 63 LDMRMGLASKKDTELKCSTCHGPFAECPGHFGYLKLALPVFNVGFFNCILDVLKCICKGC 122
Query: 106 ARILLPEKDRVECLKKMRNPKLEALQKSGLAKQI 5
+R+LL EKDR E LKKMRNP+ +ALQKS + K++
Sbjct: 123 SRVLLAEKDRREFLKKMRNPRADALQKSAIMKKV 156
>gb|EPS62830.1| hypothetical protein M569_11956, partial [Genlisea aurea]
Length = 1368
Score = 129 bits (323), Expect = 5e-28
Identities = 57/92 (61%), Positives = 72/92 (78%)
Frame = -1
Query: 277 LDPHMGPANKGGTCATCHGNFTSCPGHFGYLNLALPVFNVGYFNSLIDILKSICKSCARI 98
LD MGP NK C TCHGNF CPGH+GYL LALPV+NVGY ++++DILK ICK+C+R+
Sbjct: 56 LDMRMGPPNKRSVCGTCHGNFQECPGHYGYLALALPVYNVGYLSNIVDILKCICKNCSRV 115
Query: 97 LLPEKDRVECLKKMRNPKLEALQKSGLAKQIV 2
LL EK+ L+KMRNP+LE L+K+ L K+IV
Sbjct: 116 LLEEKEHHGFLRKMRNPRLEPLKKTDLFKKIV 147
>ref|XP_006424701.1| hypothetical protein CICLE_v10027681mg [Citrus clementina]
gi|557526635|gb|ESR37941.1| hypothetical protein
CICLE_v10027681mg [Citrus clementina]
Length = 1397
Score = 128 bits (322), Expect = 7e-28
Identities = 58/87 (66%), Positives = 72/87 (82%)
Frame = -1
Query: 262 GPANKGGTCATCHGNFTSCPGHFGYLNLALPVFNVGYFNSLIDILKSICKSCARILLPEK 83
GPANK TCATCHG F++CPGH+GYL LALPV+NVGY ++++DILK ICK C+R+LL EK
Sbjct: 87 GPANKSCTCATCHGGFSNCPGHYGYLTLALPVYNVGYLSTILDILKCICKYCSRLLLEEK 146
Query: 82 DRVECLKKMRNPKLEALQKSGLAKQIV 2
+ LKKMRNPK+EAL+K+ L K IV
Sbjct: 147 LCKDYLKKMRNPKMEALRKTDLMKSIV 173