BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus22_contig00020029
         (1028 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI24213.3| unnamed protein product [Vitis vinifera]              445   e-122
ref|XP_002275100.1| PREDICTED: chromodomain-helicase-DNA-binding...   445   e-122
ref|XP_007214348.1| hypothetical protein PRUPE_ppa000116mg [Prun...   434   e-119
ref|XP_007141483.1| hypothetical protein PHAVU_008G199800g [Phas...   422   e-115
gb|EXB55506.1| Chromodomain-helicase-DNA-binding protein 1 [Moru...   421   e-115
ref|XP_006575632.1| PREDICTED: chromodomain-helicase-DNA-binding...   421   e-115
ref|XP_006349779.1| PREDICTED: chromodomain-helicase-DNA-binding...   420   e-115
ref|XP_003545390.1| PREDICTED: chromodomain-helicase-DNA-binding...   420   e-115
ref|XP_004252878.1| PREDICTED: chromodomain-helicase-DNA-binding...   415   e-113
ref|XP_002300156.2| hypothetical protein POPTR_0001s26030g [Popu...   414   e-113
ref|XP_004156041.1| PREDICTED: LOW QUALITY PROTEIN: chromodomain...   409   e-111
ref|XP_002313369.1| hypothetical protein POPTR_0009s05250g [Popu...   409   e-111
ref|XP_007015201.1| Chromatin remodeling complex subunit isoform...   405   e-110
ref|XP_007015200.1| Chromatin remodeling complex subunit isoform...   405   e-110
ref|XP_004291747.1| PREDICTED: chromodomain-helicase-DNA-binding...   403   e-110
ref|XP_006470732.1| PREDICTED: chromodomain-helicase-DNA-binding...   402   e-110
ref|XP_004491263.1| PREDICTED: LOW QUALITY PROTEIN: chromodomain...   400   e-109
ref|XP_003600162.1| DNA-directed RNA polymerase [Medicago trunca...   398   e-108
gb|EYU35935.1| hypothetical protein MIMGU_mgv1a000126mg [Mimulus...   393   e-107
ref|XP_003617298.1| Chromodomain-helicase-DNA-binding protein [M...   390   e-106

>emb|CBI24213.3| unnamed protein product [Vitis vinifera]
          Length = 1539

 Score =  445 bits (1144), Expect = e-122
 Identities = 218/324 (67%), Positives = 262/324 (80%)
 Frame = +3

Query: 57   IRKPQRRGRGKVERSLKSVREQKSFSTHNRQRRGKTFLEEEESSEMGSDNDSGDDMKGRS 236
            ++KP+ R RG   R LK  +E KSF    R++RG+T LE+E+S E  S+NDS +D K  +
Sbjct: 90   MKKPKGRLRGNSGRGLKPTKEHKSFPAPGRRKRGRTLLEDEDSYEKDSENDSDEDFKSMT 149

Query: 237  KRSTHPRKNNNGRLTLSAKIIEQNGEVRTSSRTVRKVSYVESEESEDIDEGKTKKGQKXX 416
            +R  H RK+  G+ + +A II +N E+RTSSR+VRKVSYVESEESE+IDEGK KK QK  
Sbjct: 150  RRGAHLRKSKGGQSSTTANIIGRNSELRTSSRSVRKVSYVESEESEEIDEGKKKKSQKEE 209

Query: 417  XXXXXXXXXXKVLWHQPKGMAEEALRNNESSQPSVLSHLFDSEPDWDEMEFFIKWKGQSY 596
                      KVLWHQPKGMA+EAL+NN+S++P +LSHLFD EP+W+EMEF IKWKGQS+
Sbjct: 210  IEEEDCDSIEKVLWHQPKGMADEALKNNKSTEPILLSHLFDFEPNWNEMEFLIKWKGQSH 269

Query: 597  LHCQWKSYSDLKNLSGFKKVINYTKRVLEEWKFRNTLSREEVEVHDVGKEMELDLIKQYS 776
            LHCQWKS+SDL+NLSGFKKV+NYTK+V+EE K+RN  SREE+EV+DV KEM+LDLIKQ S
Sbjct: 270  LHCQWKSFSDLQNLSGFKKVLNYTKKVMEEVKYRNMFSREEIEVNDVSKEMDLDLIKQNS 329

Query: 777  QVDRIFADRITKNGPDDVMPEYLVKWRGLSYAEATWEKDVDISFAQDAIDEYKAREAAMS 956
            QV+RI A RI K G  DVMPEYLVKW+GLSYAEATWEKDVDI+FAQDAIDEYKAREAA +
Sbjct: 330  QVERIIAYRIGKEGSGDVMPEYLVKWQGLSYAEATWEKDVDIAFAQDAIDEYKAREAAAA 389

Query: 957  VQGKMVDFQRKKSKGSLRKLDEQP 1028
            +QGKMVD QRKKSK SLRKLDEQP
Sbjct: 390  IQGKMVDMQRKKSKASLRKLDEQP 413


>ref|XP_002275100.1| PREDICTED: chromodomain-helicase-DNA-binding protein 2-like [Vitis
            vinifera]
          Length = 1764

 Score =  445 bits (1144), Expect = e-122
 Identities = 218/324 (67%), Positives = 262/324 (80%)
 Frame = +3

Query: 57   IRKPQRRGRGKVERSLKSVREQKSFSTHNRQRRGKTFLEEEESSEMGSDNDSGDDMKGRS 236
            ++KP+ R RG   R LK  +E KSF    R++RG+T LE+E+S E  S+NDS +D K  +
Sbjct: 287  MKKPKGRLRGNSGRGLKPTKEHKSFPAPGRRKRGRTLLEDEDSYEKDSENDSDEDFKSMT 346

Query: 237  KRSTHPRKNNNGRLTLSAKIIEQNGEVRTSSRTVRKVSYVESEESEDIDEGKTKKGQKXX 416
            +R  H RK+  G+ + +A II +N E+RTSSR+VRKVSYVESEESE+IDEGK KK QK  
Sbjct: 347  RRGAHLRKSKGGQSSTTANIIGRNSELRTSSRSVRKVSYVESEESEEIDEGKKKKSQKEE 406

Query: 417  XXXXXXXXXXKVLWHQPKGMAEEALRNNESSQPSVLSHLFDSEPDWDEMEFFIKWKGQSY 596
                      KVLWHQPKGMA+EAL+NN+S++P +LSHLFD EP+W+EMEF IKWKGQS+
Sbjct: 407  IEEEDCDSIEKVLWHQPKGMADEALKNNKSTEPILLSHLFDFEPNWNEMEFLIKWKGQSH 466

Query: 597  LHCQWKSYSDLKNLSGFKKVINYTKRVLEEWKFRNTLSREEVEVHDVGKEMELDLIKQYS 776
            LHCQWKS+SDL+NLSGFKKV+NYTK+V+EE K+RN  SREE+EV+DV KEM+LDLIKQ S
Sbjct: 467  LHCQWKSFSDLQNLSGFKKVLNYTKKVMEEVKYRNMFSREEIEVNDVSKEMDLDLIKQNS 526

Query: 777  QVDRIFADRITKNGPDDVMPEYLVKWRGLSYAEATWEKDVDISFAQDAIDEYKAREAAMS 956
            QV+RI A RI K G  DVMPEYLVKW+GLSYAEATWEKDVDI+FAQDAIDEYKAREAA +
Sbjct: 527  QVERIIAYRIGKEGSGDVMPEYLVKWQGLSYAEATWEKDVDIAFAQDAIDEYKAREAAAA 586

Query: 957  VQGKMVDFQRKKSKGSLRKLDEQP 1028
            +QGKMVD QRKKSK SLRKLDEQP
Sbjct: 587  IQGKMVDMQRKKSKASLRKLDEQP 610


>ref|XP_007214348.1| hypothetical protein PRUPE_ppa000116mg [Prunus persica]
            gi|462410213|gb|EMJ15547.1| hypothetical protein
            PRUPE_ppa000116mg [Prunus persica]
          Length = 1761

 Score =  434 bits (1115), Expect = e-119
 Identities = 215/323 (66%), Positives = 262/323 (81%)
 Frame = +3

Query: 60   RKPQRRGRGKVERSLKSVREQKSFSTHNRQRRGKTFLEEEESSEMGSDNDSGDDMKGRSK 239
            +KP+ R RGK   S+KS RE+KS+   +RQRRGK+  ++EESS   S+++S +D K   +
Sbjct: 302  KKPKSRHRGKGGLSVKSTRERKSYHASSRQRRGKSSFDDEESSAEESESESDEDFKSTKR 361

Query: 240  RSTHPRKNNNGRLTLSAKIIEQNGEVRTSSRTVRKVSYVESEESEDIDEGKTKKGQKXXX 419
            +  H RK+N GR  ++ +    NGEVRTS+R+VRKVSYVESE S+++DEGK KK QK   
Sbjct: 362  KGVHLRKSN-GRKNVTGR----NGEVRTSTRSVRKVSYVESEGSDEVDEGKKKKSQKEEN 416

Query: 420  XXXXXXXXXKVLWHQPKGMAEEALRNNESSQPSVLSHLFDSEPDWDEMEFFIKWKGQSYL 599
                     KVLWHQPKGMAEEALRNN S++P +LSHLFDSEPDW+ MEF IKWKGQS+L
Sbjct: 417  EEEDGDYIEKVLWHQPKGMAEEALRNNRSTEPVLLSHLFDSEPDWNSMEFLIKWKGQSHL 476

Query: 600  HCQWKSYSDLKNLSGFKKVINYTKRVLEEWKFRNTLSREEVEVHDVGKEMELDLIKQYSQ 779
            HCQWKS S+L+NLSGFKKV+NYTK+V+E+ K+R T+SREE+EVHDV KEM+LDLIKQ SQ
Sbjct: 477  HCQWKSISELQNLSGFKKVLNYTKKVMEDAKYRKTISREEIEVHDVSKEMDLDLIKQNSQ 536

Query: 780  VDRIFADRITKNGPDDVMPEYLVKWRGLSYAEATWEKDVDISFAQDAIDEYKAREAAMSV 959
            V+RI +DRI ++   DV PEYLVKW+GLSYAEATWEKDVDI+FAQDAIDE+KAREAAM+V
Sbjct: 537  VERIISDRIRQDSSGDVGPEYLVKWQGLSYAEATWEKDVDIAFAQDAIDEFKAREAAMAV 596

Query: 960  QGKMVDFQRKKSKGSLRKLDEQP 1028
            QGKMVD QRKKSKGSLRKLDEQP
Sbjct: 597  QGKMVDLQRKKSKGSLRKLDEQP 619


>ref|XP_007141483.1| hypothetical protein PHAVU_008G199800g [Phaseolus vulgaris]
            gi|561014616|gb|ESW13477.1| hypothetical protein
            PHAVU_008G199800g [Phaseolus vulgaris]
          Length = 1759

 Score =  422 bits (1085), Expect = e-115
 Identities = 207/324 (63%), Positives = 261/324 (80%), Gaps = 1/324 (0%)
 Frame = +3

Query: 60   RKPQRRGRGKVERSLKSVREQKSFSTHNRQRRGKTFLEEEESSEMGSDNDSGDDMKGRSK 239
            ++P+ R RGK+ +++KS R++K ++   RQRR K+  E+ ES+   SDNDS +D K   K
Sbjct: 299  KRPKGRQRGKIGQNMKSTRDRKVYAASGRQRRVKSSFEDNESTTEDSDNDSDEDFKSSKK 358

Query: 240  RSTHPRKNNNGRLTLSAKIIEQNGEVRTSSRTVRKVSYVESEESEDIDEGKTKKGQKXXX 419
            RS H RKNN GR + +     ++ EVRTSSRTVRKVSYVESEESE++DEGK KK QK   
Sbjct: 359  RSVHVRKNN-GRSSSAIGFSMRSNEVRTSSRTVRKVSYVESEESEEVDEGKKKKSQKEEI 417

Query: 420  XXXXXXXXXKVLWHQPKGMAEEALRNNESSQPSVLSHLFDSEPDWDEMEFFIKWKGQSYL 599
                     KVLWHQPKG AE+A RNN S++P ++SHLFDSE DW+EMEF IKWKGQS+L
Sbjct: 418  DEDDSDSIEKVLWHQPKGTAEDAERNNRSTEPVLMSHLFDSEIDWNEMEFLIKWKGQSHL 477

Query: 600  HCQWKSYSDLKNLSGFKKVINYTKRVLEEWKFRNTLSREEVEVHDVGKEMELDLIKQYSQ 779
            HCQWKS+++L+NLSGFKKV+NYTK+++E+ ++R T+SREE+EV+DV KEM+LD+IKQ SQ
Sbjct: 478  HCQWKSFAELQNLSGFKKVLNYTKKIMEDMRYRRTISREEIEVNDVSKEMDLDIIKQNSQ 537

Query: 780  VDRIFADRITKNGPDDVMPEYLVKWRGLSYAEATWEKDVDISFAQDAIDEYKAREAAM-S 956
            V+RI ADRI+K+   +V+PEYLVKW+GLSYAEATWEKD+DI+FAQ AIDEYKAREAAM +
Sbjct: 538  VERIIADRISKDNSSNVIPEYLVKWQGLSYAEATWEKDIDIAFAQHAIDEYKAREAAMAA 597

Query: 957  VQGKMVDFQRKKSKGSLRKLDEQP 1028
            VQGKMVD QRKKSK SLRKL+EQP
Sbjct: 598  VQGKMVDSQRKKSKASLRKLEEQP 621


>gb|EXB55506.1| Chromodomain-helicase-DNA-binding protein 1 [Morus notabilis]
          Length = 1754

 Score =  421 bits (1083), Expect = e-115
 Identities = 209/323 (64%), Positives = 257/323 (79%)
 Frame = +3

Query: 60   RKPQRRGRGKVERSLKSVREQKSFSTHNRQRRGKTFLEEEESSEMGSDNDSGDDMKGRSK 239
            +K + +  GK  RS+KS RE KSF  + RQRRGK+   ++ESS   SD+DS +  K   K
Sbjct: 248  KKLKSKKHGKGGRSVKSTREHKSFQGYGRQRRGKSSFGDDESSAEDSDSDSDEGFKSTRK 307

Query: 240  RSTHPRKNNNGRLTLSAKIIEQNGEVRTSSRTVRKVSYVESEESEDIDEGKTKKGQKXXX 419
            +  + RKN+ GR TLS  +  +N EVRTSSR+VRKVSYVES+ESED+DE   KK QK   
Sbjct: 308  KGVNLRKNS-GRSTLSTTLTGRNSEVRTSSRSVRKVSYVESDESEDVDESMKKKSQKEEL 366

Query: 420  XXXXXXXXXKVLWHQPKGMAEEALRNNESSQPSVLSHLFDSEPDWDEMEFFIKWKGQSYL 599
                     KVLWHQPKG AEEALRNN S++P +LSHLFDSEPD +EMEF IKWKGQS+L
Sbjct: 367  EEEDGDSIEKVLWHQPKGTAEEALRNNRSTEPILLSHLFDSEPDLNEMEFLIKWKGQSHL 426

Query: 600  HCQWKSYSDLKNLSGFKKVINYTKRVLEEWKFRNTLSREEVEVHDVGKEMELDLIKQYSQ 779
            HCQWKS+S+L+NLSGFKKV+NYTK+V+E+ K+R  ++REE+EV+DV KEM+LDLIKQ SQ
Sbjct: 427  HCQWKSFSELQNLSGFKKVLNYTKKVMEDVKYRKAVTREEIEVNDVSKEMDLDLIKQNSQ 486

Query: 780  VDRIFADRITKNGPDDVMPEYLVKWRGLSYAEATWEKDVDISFAQDAIDEYKAREAAMSV 959
            V+R+ ADRI+K+   DV+PEYLVKW+GLSYAEATWEKDVDI+FAQDAIDEYKARE+ +++
Sbjct: 487  VERVIADRISKDSTGDVIPEYLVKWQGLSYAEATWEKDVDIAFAQDAIDEYKARESEIAI 546

Query: 960  QGKMVDFQRKKSKGSLRKLDEQP 1028
            QG+ VDFQRKKSK SLRKLDEQP
Sbjct: 547  QGQKVDFQRKKSKASLRKLDEQP 569


>ref|XP_006575632.1| PREDICTED: chromodomain-helicase-DNA-binding protein 1-like [Glycine
            max]
          Length = 1766

 Score =  421 bits (1081), Expect = e-115
 Identities = 204/323 (63%), Positives = 258/323 (79%)
 Frame = +3

Query: 60   RKPQRRGRGKVERSLKSVREQKSFSTHNRQRRGKTFLEEEESSEMGSDNDSGDDMKGRSK 239
            ++P+ R RGK+ +++KS RE+K ++   RQRR K+  E+ ES+   SD+D  +D K   K
Sbjct: 305  KRPKGRQRGKIGQNIKSTRERKVYAASGRQRRVKSSFEDNESTTEDSDSDGDEDFKSTKK 364

Query: 240  RSTHPRKNNNGRLTLSAKIIEQNGEVRTSSRTVRKVSYVESEESEDIDEGKTKKGQKXXX 419
            RS H RKNN GR + +     +N EVRTSSRTVRKVSYVESEESE+ DE K KK QK   
Sbjct: 365  RSVHVRKNN-GRSSAATGFSSRNSEVRTSSRTVRKVSYVESEESEEADEAKKKKSQKEEI 423

Query: 420  XXXXXXXXXKVLWHQPKGMAEEALRNNESSQPSVLSHLFDSEPDWDEMEFFIKWKGQSYL 599
                     KVLWHQPKGMAE+A RNN S++P ++SHLFDSE DW+E+EF IKWKGQS+L
Sbjct: 424  EEDDGDSIEKVLWHQPKGMAEDAQRNNRSTEPVLMSHLFDSEIDWNEIEFLIKWKGQSHL 483

Query: 600  HCQWKSYSDLKNLSGFKKVINYTKRVLEEWKFRNTLSREEVEVHDVGKEMELDLIKQYSQ 779
            HCQWKS+++L+NLSGFKKV+NYTK+++E+ ++R T+SREE+EV+DV KEM+LD+IKQ SQ
Sbjct: 484  HCQWKSFAELQNLSGFKKVLNYTKKIMEDIRYRRTISREEIEVNDVSKEMDLDIIKQNSQ 543

Query: 780  VDRIFADRITKNGPDDVMPEYLVKWRGLSYAEATWEKDVDISFAQDAIDEYKAREAAMSV 959
            V+RI ADRI+ +   +V+PEYLVKW+GLSYAEATWEKD+DI+FAQ AIDEYKAREAAM+V
Sbjct: 544  VERIIADRISNDNSGNVIPEYLVKWQGLSYAEATWEKDIDIAFAQHAIDEYKAREAAMAV 603

Query: 960  QGKMVDFQRKKSKGSLRKLDEQP 1028
            QGKMVD QRKKSK SLRKL++QP
Sbjct: 604  QGKMVDSQRKKSKASLRKLEKQP 626


>ref|XP_006349779.1| PREDICTED: chromodomain-helicase-DNA-binding protein 1-like isoform
            X1 [Solanum tuberosum] gi|565366197|ref|XP_006349780.1|
            PREDICTED: chromodomain-helicase-DNA-binding protein
            1-like isoform X2 [Solanum tuberosum]
            gi|565366199|ref|XP_006349781.1| PREDICTED:
            chromodomain-helicase-DNA-binding protein 1-like isoform
            X3 [Solanum tuberosum]
          Length = 1707

 Score =  420 bits (1080), Expect = e-115
 Identities = 209/324 (64%), Positives = 259/324 (79%), Gaps = 1/324 (0%)
 Frame = +3

Query: 60   RKPQRRGRGKVERSLKSVREQKSFSTHNRQRRGKTFLEEEESSEMGSDNDSGDDMKGRSK 239
            RKPQ + + +   S+KS R  +S +T  RQ+RG+T  EEEESSE  S+N+S +D   + +
Sbjct: 264  RKPQGKQKNRGGHSVKSTRVVRSLATSARQKRGRTSYEEEESSEHDSENESDEDFGNKPR 323

Query: 240  RSTHPRKNNNGRLTLSAKIIEQNGEVRTSSR-TVRKVSYVESEESEDIDEGKTKKGQKXX 416
            R  + R  N+GR + +A +  +N E+RTSSR  VRKVSY ESEESE+IDE K KKGQK  
Sbjct: 324  RVANLRLKNSGRSS-AASVSGRNSEIRTSSRRAVRKVSYAESEESEEIDESKQKKGQKEE 382

Query: 417  XXXXXXXXXXKVLWHQPKGMAEEALRNNESSQPSVLSHLFDSEPDWDEMEFFIKWKGQSY 596
                      KVLWHQPKGMAEEA RNN+S+ P +LSHL+DSEPDW+EMEF IKWKGQS+
Sbjct: 383  LEEEDCDSIEKVLWHQPKGMAEEAARNNKSADPMLLSHLYDSEPDWNEMEFLIKWKGQSH 442

Query: 597  LHCQWKSYSDLKNLSGFKKVINYTKRVLEEWKFRNTLSREEVEVHDVGKEMELDLIKQYS 776
            LHCQWKS+ +L+NLSGFKKV+NYTKRV+E+ K+R T+SREE+EV+DV KEM+LD+IK  S
Sbjct: 443  LHCQWKSFVELQNLSGFKKVLNYTKRVMEDVKYRKTVSREEIEVNDVSKEMDLDIIKLNS 502

Query: 777  QVDRIFADRITKNGPDDVMPEYLVKWRGLSYAEATWEKDVDISFAQDAIDEYKAREAAMS 956
            QV+R+ ADRI+K+G  +V+PEYLVKW+GLSYAEATWEKDVDI+F QDAIDEYKAREAA+ 
Sbjct: 503  QVERVIADRISKDGYGNVVPEYLVKWKGLSYAEATWEKDVDIAFGQDAIDEYKAREAAIM 562

Query: 957  VQGKMVDFQRKKSKGSLRKLDEQP 1028
            VQGK VDFQRKKS+GSLRKL+EQP
Sbjct: 563  VQGKSVDFQRKKSRGSLRKLEEQP 586


>ref|XP_003545390.1| PREDICTED: chromodomain-helicase-DNA-binding protein 1-like isoform
            X1 [Glycine max] gi|571506899|ref|XP_006595768.1|
            PREDICTED: chromodomain-helicase-DNA-binding protein
            1-like isoform X2 [Glycine max]
          Length = 1764

 Score =  420 bits (1079), Expect = e-115
 Identities = 204/323 (63%), Positives = 257/323 (79%)
 Frame = +3

Query: 60   RKPQRRGRGKVERSLKSVREQKSFSTHNRQRRGKTFLEEEESSEMGSDNDSGDDMKGRSK 239
            ++P+ R RGK+ +++KS R++K +    RQRR K+  E  ES+   SD+DS +D K   K
Sbjct: 303  KRPKGRQRGKIGQNIKSTRDRKVYVASGRQRRVKSSFEGNESTTEDSDSDSDEDFKSTKK 362

Query: 240  RSTHPRKNNNGRLTLSAKIIEQNGEVRTSSRTVRKVSYVESEESEDIDEGKTKKGQKXXX 419
            RS H RKNN GR + +     +N E+RTSSRTVRKVSYVESEESE+ DEGK KK QK   
Sbjct: 363  RSVHVRKNN-GRSSAATGFSSRNSEIRTSSRTVRKVSYVESEESEEADEGKKKKSQKEEI 421

Query: 420  XXXXXXXXXKVLWHQPKGMAEEALRNNESSQPSVLSHLFDSEPDWDEMEFFIKWKGQSYL 599
                     KVLWHQPKGMAE+A RNN S++P +LSHLFDSE DW+E+EF IKWKGQS+L
Sbjct: 422  EEDDGDSIEKVLWHQPKGMAEDAQRNNRSTEPVLLSHLFDSEIDWNEIEFLIKWKGQSHL 481

Query: 600  HCQWKSYSDLKNLSGFKKVINYTKRVLEEWKFRNTLSREEVEVHDVGKEMELDLIKQYSQ 779
            HC WKS+++L+NLSGFKKV+NYTK+++E+ ++R T+SREE+EV+DV KEM+LD+IKQ SQ
Sbjct: 482  HCLWKSFAELQNLSGFKKVLNYTKKIMEDIRYRRTISREEIEVNDVSKEMDLDIIKQNSQ 541

Query: 780  VDRIFADRITKNGPDDVMPEYLVKWRGLSYAEATWEKDVDISFAQDAIDEYKAREAAMSV 959
            V+R+ ADRI+K+   +V+PEYLVKW+GLSYAEATWEKD+DI+FAQ  IDEYKAREAAM+V
Sbjct: 542  VERVIADRISKDNSGNVIPEYLVKWQGLSYAEATWEKDIDIAFAQHTIDEYKAREAAMAV 601

Query: 960  QGKMVDFQRKKSKGSLRKLDEQP 1028
            QGKMVD QRKKSK SLRKL+EQP
Sbjct: 602  QGKMVDSQRKKSKASLRKLEEQP 624


>ref|XP_004252878.1| PREDICTED: chromodomain-helicase-DNA-binding protein 2-like [Solanum
            lycopersicum]
          Length = 1707

 Score =  415 bits (1067), Expect = e-113
 Identities = 207/324 (63%), Positives = 258/324 (79%), Gaps = 1/324 (0%)
 Frame = +3

Query: 60   RKPQRRGRGKVERSLKSVREQKSFSTHNRQRRGKTFLEEEESSEMGSDNDSGDDMKGRSK 239
            RK Q + + +   S+KS R  +S +T  RQ+RG+T  EEEESSE  S+N+S +D   + +
Sbjct: 264  RKSQGKQKNRGGHSVKSTRVVRSLATSARQKRGRTSYEEEESSEHDSENESDEDFGNKPR 323

Query: 240  RSTHPRKNNNGRLTLSAKIIEQNGEVRTSSR-TVRKVSYVESEESEDIDEGKTKKGQKXX 416
            R  + R  N+GR + +A +  +N E+RTSSR +VRKVSY ESEESE+IDE K KKGQK  
Sbjct: 324  RVANLRLKNSGRSS-AASVSGRNSEIRTSSRRSVRKVSYAESEESEEIDESKQKKGQKEE 382

Query: 417  XXXXXXXXXXKVLWHQPKGMAEEALRNNESSQPSVLSHLFDSEPDWDEMEFFIKWKGQSY 596
                      KVLWHQPKGMAEEA  NN+S+ P +LSHL+DSEPDW+EMEF IKWKGQS+
Sbjct: 383  LEEEDCDSIEKVLWHQPKGMAEEAAMNNKSADPMLLSHLYDSEPDWNEMEFLIKWKGQSH 442

Query: 597  LHCQWKSYSDLKNLSGFKKVINYTKRVLEEWKFRNTLSREEVEVHDVGKEMELDLIKQYS 776
            LHCQWKS+ +L+NLSGFKKV+NYTKRV+E+ K+R T+SREE+EV+DV KEM+LD+IK  S
Sbjct: 443  LHCQWKSFVELQNLSGFKKVLNYTKRVMEDVKYRKTVSREEIEVNDVSKEMDLDIIKLNS 502

Query: 777  QVDRIFADRITKNGPDDVMPEYLVKWRGLSYAEATWEKDVDISFAQDAIDEYKAREAAMS 956
            QV+R+ ADRI+K+G  +V+PEYLVKW+GLSYAEATWEKDVDI+F QDAIDEYKAREAA+ 
Sbjct: 503  QVERVIADRISKDGYGNVVPEYLVKWKGLSYAEATWEKDVDIAFGQDAIDEYKAREAAIM 562

Query: 957  VQGKMVDFQRKKSKGSLRKLDEQP 1028
            VQGK VDFQRKKS+GSLRKL+EQP
Sbjct: 563  VQGKSVDFQRKKSRGSLRKLEEQP 586


>ref|XP_002300156.2| hypothetical protein POPTR_0001s26030g [Populus trichocarpa]
            gi|550348207|gb|EEE84961.2| hypothetical protein
            POPTR_0001s26030g [Populus trichocarpa]
          Length = 1767

 Score =  414 bits (1064), Expect = e-113
 Identities = 208/323 (64%), Positives = 250/323 (77%)
 Frame = +3

Query: 60   RKPQRRGRGKVERSLKSVREQKSFSTHNRQRRGKTFLEEEESSEMGSDNDSGDDMKGRSK 239
            +KP+ R  GK  R+ KS +E KS     RQ+RGK   EE+E S   SD+DS    K  +K
Sbjct: 290  KKPKSRQHGKSGRNTKSAKENKSLHASGRQKRGKPSFEEDEYSAEDSDSDSDAVSKNMTK 349

Query: 240  RSTHPRKNNNGRLTLSAKIIEQNGEVRTSSRTVRKVSYVESEESEDIDEGKTKKGQKXXX 419
            R  H RK+N  R  +S  I  +N EVRTSSR+VRKVSYVES+ESE+IDEGK KK QK   
Sbjct: 350  RGAHFRKSN-ARSAMSTNIGGRNNEVRTSSRSVRKVSYVESDESEEIDEGKKKKAQKEEV 408

Query: 420  XXXXXXXXXKVLWHQPKGMAEEALRNNESSQPSVLSHLFDSEPDWDEMEFFIKWKGQSYL 599
                     +VLWHQP+GMAE+A+RNN S+ P +LSHLFDS  DW EMEF IKWKGQS+L
Sbjct: 409  EEEDGDSIERVLWHQPRGMAEDAVRNNRSTAPILLSHLFDSALDWKEMEFLIKWKGQSHL 468

Query: 600  HCQWKSYSDLKNLSGFKKVINYTKRVLEEWKFRNTLSREEVEVHDVGKEMELDLIKQYSQ 779
            HCQWKS+S+L+NLSGFKKV+NYTK+V+E+ ++R   +REE+EV+DV KEM+LDLIKQ SQ
Sbjct: 469  HCQWKSFSELQNLSGFKKVLNYTKKVMEDVRYRRKFTREEIEVNDVSKEMDLDLIKQNSQ 528

Query: 780  VDRIFADRITKNGPDDVMPEYLVKWRGLSYAEATWEKDVDISFAQDAIDEYKAREAAMSV 959
            V+RI ADRI K+   +V+PEYLVKW+GLSYAEATWEKDVDISFAQDAIDEYKAREAA++V
Sbjct: 529  VERIIADRINKDSSGNVVPEYLVKWQGLSYAEATWEKDVDISFAQDAIDEYKAREAAIAV 588

Query: 960  QGKMVDFQRKKSKGSLRKLDEQP 1028
            QGKMVD QRKK K SLRKL+EQP
Sbjct: 589  QGKMVDLQRKKGKASLRKLEEQP 611


>ref|XP_004156041.1| PREDICTED: LOW QUALITY PROTEIN: chromodomain-helicase-DNA-binding
            protein 2-like [Cucumis sativus]
          Length = 1761

 Score =  409 bits (1051), Expect = e-111
 Identities = 206/323 (63%), Positives = 253/323 (78%)
 Frame = +3

Query: 60   RKPQRRGRGKVERSLKSVREQKSFSTHNRQRRGKTFLEEEESSEMGSDNDSGDDMKGRSK 239
            +K + + RGK  R++KS  E+K + +  RQR+GK   EE+ESS   S +DS +  K   K
Sbjct: 300  KKGRGKQRGKGVRNVKSTSERKPYQSSIRQRKGKFSYEEDESSMEDSASDSVEAFKSSVK 359

Query: 240  RSTHPRKNNNGRLTLSAKIIEQNGEVRTSSRTVRKVSYVESEESEDIDEGKTKKGQKXXX 419
              TH RKN+ GR +++A +  +  EVRTSSR+VRKVSYVESEESE+ DEGK KK QK   
Sbjct: 360  TGTHLRKNS-GRYSVTAGVSGRRSEVRTSSRSVRKVSYVESEESEEFDEGKKKKSQKEEV 418

Query: 420  XXXXXXXXXKVLWHQPKGMAEEALRNNESSQPSVLSHLFDSEPDWDEMEFFIKWKGQSYL 599
                     KVLWHQPKG AE+A+RNN    P + SH FDSEPDW+E+EF IKWKGQS+L
Sbjct: 419  EEEDGDAIEKVLWHQPKGTAEDAIRNNRPIDPVLSSHSFDSEPDWNEVEFLIKWKGQSHL 478

Query: 600  HCQWKSYSDLKNLSGFKKVINYTKRVLEEWKFRNTLSREEVEVHDVGKEMELDLIKQYSQ 779
            HCQWK +S+L+ LSGFKKV+NYTK+V++E ++R ++SREE+EV+DV KEM+LDLIKQ SQ
Sbjct: 479  HCQWKPFSELQYLSGFKKVLNYTKKVMDEIRYRKSVSREEIEVYDVSKEMDLDLIKQNSQ 538

Query: 780  VDRIFADRITKNGPDDVMPEYLVKWRGLSYAEATWEKDVDISFAQDAIDEYKAREAAMSV 959
            V+R+ ADRI+K+G  DV+PEYLVKW+GLSYAEATWEKDVDISFAQDAIDEYKAREAA+SV
Sbjct: 539  VERVIADRISKDGSGDVVPEYLVKWQGLSYAEATWEKDVDISFAQDAIDEYKAREAAISV 598

Query: 960  QGKMVDFQRKKSKGSLRKLDEQP 1028
            QGK VD QRKKSK SLRKLDEQP
Sbjct: 599  QGKSVDLQRKKSKVSLRKLDEQP 621


>ref|XP_002313369.1| hypothetical protein POPTR_0009s05250g [Populus trichocarpa]
            gi|222849777|gb|EEE87324.1| hypothetical protein
            POPTR_0009s05250g [Populus trichocarpa]
          Length = 1748

 Score =  409 bits (1051), Expect = e-111
 Identities = 205/323 (63%), Positives = 251/323 (77%)
 Frame = +3

Query: 60   RKPQRRGRGKVERSLKSVREQKSFSTHNRQRRGKTFLEEEESSEMGSDNDSGDDMKGRSK 239
            +KP+ R +GK   + KS RE  S     RQ+RGKT  EE+E S    D+DS  D K  ++
Sbjct: 292  KKPKGRQQGKGGCNTKSAREHTSLRASGRQKRGKTSFEEDEYS--AEDSDSDKDFKNMTQ 349

Query: 240  RSTHPRKNNNGRLTLSAKIIEQNGEVRTSSRTVRKVSYVESEESEDIDEGKTKKGQKXXX 419
            R  H RK+N  R T+S  I  +N EVRTSSR+VRKVSYVES+ESE+I EGK K   K   
Sbjct: 350  RGEHLRKSN-ARSTMSTNIGGRNNEVRTSSRSVRKVSYVESDESEEIGEGKKKNALKDEV 408

Query: 420  XXXXXXXXXKVLWHQPKGMAEEALRNNESSQPSVLSHLFDSEPDWDEMEFFIKWKGQSYL 599
                     +VLWHQP+G AE+A+RNN S++P +LS+LFDS PDW EMEF IKWKGQS++
Sbjct: 409  EEEDGDSIERVLWHQPRGTAEDAMRNNRSTEPVLLSYLFDSVPDWKEMEFLIKWKGQSHM 468

Query: 600  HCQWKSYSDLKNLSGFKKVINYTKRVLEEWKFRNTLSREEVEVHDVGKEMELDLIKQYSQ 779
            HCQWKS+SDL+NLSGFKKV+NYTK+V+E+ ++R + +REE+EV+DV KEM+LDLIKQ SQ
Sbjct: 469  HCQWKSFSDLQNLSGFKKVLNYTKKVMEDVRYRRSFTREEIEVNDVSKEMDLDLIKQNSQ 528

Query: 780  VDRIFADRITKNGPDDVMPEYLVKWRGLSYAEATWEKDVDISFAQDAIDEYKAREAAMSV 959
            V+RI ADRITK+   +V+PEY+VKWRGLSYAEATWEKDVDI+FAQDAIDEYKAREAA++V
Sbjct: 529  VERIIADRITKDSSGNVVPEYIVKWRGLSYAEATWEKDVDIAFAQDAIDEYKAREAAIAV 588

Query: 960  QGKMVDFQRKKSKGSLRKLDEQP 1028
            QGKMVD QRKK K SLRKLDEQP
Sbjct: 589  QGKMVDLQRKKGKASLRKLDEQP 611


>ref|XP_007015201.1| Chromatin remodeling complex subunit isoform 2 [Theobroma cacao]
            gi|508785564|gb|EOY32820.1| Chromatin remodeling complex
            subunit isoform 2 [Theobroma cacao]
          Length = 1810

 Score =  405 bits (1042), Expect = e-110
 Identities = 205/323 (63%), Positives = 256/323 (79%)
 Frame = +3

Query: 60   RKPQRRGRGKVERSLKSVREQKSFSTHNRQRRGKTFLEEEESSEMGSDNDSGDDMKGRSK 239
            +KP+ R + KV R++K  +E+KS    NRQRRG++  EE+E S   SD++S  + K  ++
Sbjct: 298  KKPKGRQQVKVGRNVKPNKERKS---SNRQRRGRSSFEEDEYSAEDSDSESDVNFKSMAR 354

Query: 240  RSTHPRKNNNGRLTLSAKIIEQNGEVRTSSRTVRKVSYVESEESEDIDEGKTKKGQKXXX 419
            R  + RK+N     L++  + +N EVRTSSR+VRKVSYVESEESE+IDEGK KK  K   
Sbjct: 355  RGGNLRKHNARSNMLTS--MGRNNEVRTSSRSVRKVSYVESEESEEIDEGKKKKTLKDEA 412

Query: 420  XXXXXXXXXKVLWHQPKGMAEEALRNNESSQPSVLSHLFDSEPDWDEMEFFIKWKGQSYL 599
                     KVLWHQPKGMAE+A+RNN S++P +LSHLFDSEPDW+EMEF IKWKGQS+L
Sbjct: 413  EEEDGDSIEKVLWHQPKGMAEDAIRNNRSTEPVLLSHLFDSEPDWNEMEFLIKWKGQSHL 472

Query: 600  HCQWKSYSDLKNLSGFKKVINYTKRVLEEWKFRNTLSREEVEVHDVGKEMELDLIKQYSQ 779
            HCQWKS+ +L+NLSGFKKV+NY+K+V+E+ ++R  LSREE+EV+DV KEM+LDLIKQ SQ
Sbjct: 473  HCQWKSFFELQNLSGFKKVLNYSKKVMEDVRYRKALSREEIEVNDVSKEMDLDLIKQNSQ 532

Query: 780  VDRIFADRITKNGPDDVMPEYLVKWRGLSYAEATWEKDVDISFAQDAIDEYKAREAAMSV 959
            V+R+  DRI+K+    VM EYLVKW+GLSYAEATWEKD+DI+FAQDAIDEYKAREAAM+V
Sbjct: 533  VERVIVDRISKDASGSVMAEYLVKWQGLSYAEATWEKDIDIAFAQDAIDEYKAREAAMAV 592

Query: 960  QGKMVDFQRKKSKGSLRKLDEQP 1028
            QGKMVD QRKK K SLRKLDEQP
Sbjct: 593  QGKMVDHQRKKGKASLRKLDEQP 615


>ref|XP_007015200.1| Chromatin remodeling complex subunit isoform 1 [Theobroma cacao]
            gi|590584532|ref|XP_007015202.1| Chromatin remodeling
            complex subunit isoform 1 [Theobroma cacao]
            gi|508785563|gb|EOY32819.1| Chromatin remodeling complex
            subunit isoform 1 [Theobroma cacao]
            gi|508785565|gb|EOY32821.1| Chromatin remodeling complex
            subunit isoform 1 [Theobroma cacao]
          Length = 1768

 Score =  405 bits (1042), Expect = e-110
 Identities = 205/323 (63%), Positives = 256/323 (79%)
 Frame = +3

Query: 60   RKPQRRGRGKVERSLKSVREQKSFSTHNRQRRGKTFLEEEESSEMGSDNDSGDDMKGRSK 239
            +KP+ R + KV R++K  +E+KS    NRQRRG++  EE+E S   SD++S  + K  ++
Sbjct: 298  KKPKGRQQVKVGRNVKPNKERKS---SNRQRRGRSSFEEDEYSAEDSDSESDVNFKSMAR 354

Query: 240  RSTHPRKNNNGRLTLSAKIIEQNGEVRTSSRTVRKVSYVESEESEDIDEGKTKKGQKXXX 419
            R  + RK+N     L++  + +N EVRTSSR+VRKVSYVESEESE+IDEGK KK  K   
Sbjct: 355  RGGNLRKHNARSNMLTS--MGRNNEVRTSSRSVRKVSYVESEESEEIDEGKKKKTLKDEA 412

Query: 420  XXXXXXXXXKVLWHQPKGMAEEALRNNESSQPSVLSHLFDSEPDWDEMEFFIKWKGQSYL 599
                     KVLWHQPKGMAE+A+RNN S++P +LSHLFDSEPDW+EMEF IKWKGQS+L
Sbjct: 413  EEEDGDSIEKVLWHQPKGMAEDAIRNNRSTEPVLLSHLFDSEPDWNEMEFLIKWKGQSHL 472

Query: 600  HCQWKSYSDLKNLSGFKKVINYTKRVLEEWKFRNTLSREEVEVHDVGKEMELDLIKQYSQ 779
            HCQWKS+ +L+NLSGFKKV+NY+K+V+E+ ++R  LSREE+EV+DV KEM+LDLIKQ SQ
Sbjct: 473  HCQWKSFFELQNLSGFKKVLNYSKKVMEDVRYRKALSREEIEVNDVSKEMDLDLIKQNSQ 532

Query: 780  VDRIFADRITKNGPDDVMPEYLVKWRGLSYAEATWEKDVDISFAQDAIDEYKAREAAMSV 959
            V+R+  DRI+K+    VM EYLVKW+GLSYAEATWEKD+DI+FAQDAIDEYKAREAAM+V
Sbjct: 533  VERVIVDRISKDASGSVMAEYLVKWQGLSYAEATWEKDIDIAFAQDAIDEYKAREAAMAV 592

Query: 960  QGKMVDFQRKKSKGSLRKLDEQP 1028
            QGKMVD QRKK K SLRKLDEQP
Sbjct: 593  QGKMVDHQRKKGKASLRKLDEQP 615


>ref|XP_004291747.1| PREDICTED: chromodomain-helicase-DNA-binding protein 2-like [Fragaria
            vesca subsp. vesca]
          Length = 1746

 Score =  403 bits (1036), Expect = e-110
 Identities = 202/318 (63%), Positives = 249/318 (78%)
 Frame = +3

Query: 75   RGRGKVERSLKSVREQKSFSTHNRQRRGKTFLEEEESSEMGSDNDSGDDMKGRSKRSTHP 254
            R R K   ++K  RE+KS+   +RQRR K+  +++ESS   S++DS +  K   ++  H 
Sbjct: 305  RHRSKGAHTVKLKRERKSYIGSSRQRRRKSSFDDDESSADDSESDSDEGFKSTRRKGAHI 364

Query: 255  RKNNNGRLTLSAKIIEQNGEVRTSSRTVRKVSYVESEESEDIDEGKTKKGQKXXXXXXXX 434
            RK+N GR T    +  +NGEVR S+R+VRKVSYVESE S++ DEGK KK QK        
Sbjct: 365  RKSN-GRTT---NVSGRNGEVRASTRSVRKVSYVESEGSDEADEGKKKKSQKEDIEEEDG 420

Query: 435  XXXXKVLWHQPKGMAEEALRNNESSQPSVLSHLFDSEPDWDEMEFFIKWKGQSYLHCQWK 614
                KVLWHQPKGMAE+A+RNN S++P +LSHLFDSEPDW   EF IKWKG S+LHCQWK
Sbjct: 421  DYIEKVLWHQPKGMAEDAIRNNRSAEPLLLSHLFDSEPDWCNTEFLIKWKGLSHLHCQWK 480

Query: 615  SYSDLKNLSGFKKVINYTKRVLEEWKFRNTLSREEVEVHDVGKEMELDLIKQYSQVDRIF 794
             +S+L++LSGFKKV+NYTK+V E+ ++R T+SREE+EVHDV KEM+LDLIKQ SQV+RI 
Sbjct: 481  IFSELQSLSGFKKVVNYTKKVTEDARYRKTISREEIEVHDVSKEMDLDLIKQNSQVERII 540

Query: 795  ADRITKNGPDDVMPEYLVKWRGLSYAEATWEKDVDISFAQDAIDEYKAREAAMSVQGKMV 974
            ADRI ++   DV+PEYLVKW+GLSYAEATWEKDVDI+FAQDAIDE+KAREAAM+VQGKMV
Sbjct: 541  ADRIKQDSSGDVVPEYLVKWQGLSYAEATWEKDVDIAFAQDAIDEFKAREAAMAVQGKMV 600

Query: 975  DFQRKKSKGSLRKLDEQP 1028
            D QRKKSKGSLRKLDEQP
Sbjct: 601  DLQRKKSKGSLRKLDEQP 618


>ref|XP_006470732.1| PREDICTED: chromodomain-helicase-DNA-binding protein 1-like isoform
            X1 [Citrus sinensis] gi|568833055|ref|XP_006470733.1|
            PREDICTED: chromodomain-helicase-DNA-binding protein
            1-like isoform X2 [Citrus sinensis]
          Length = 1777

 Score =  402 bits (1034), Expect = e-110
 Identities = 203/324 (62%), Positives = 250/324 (77%), Gaps = 1/324 (0%)
 Frame = +3

Query: 60   RKPQRRGRG-KVERSLKSVREQKSFSTHNRQRRGKTFLEEEESSEMGSDNDSGDDMKGRS 236
            +K + R RG KV R++K  RE+KS  + +RQRRGK   EE++ S   SD++S +D K  +
Sbjct: 298  KKSKGRQRGVKVGRNVKPARERKSLYSSSRQRRGKPSFEEDDYSAEDSDSESDEDFKSIT 357

Query: 237  KRSTHPRKNNNGRLTLSAKIIEQNGEVRTSSRTVRKVSYVESEESEDIDEGKTKKGQKXX 416
            +R    RK N  R T+S KI  QN EVRTSSR+VRKVSYVES+ SE++DEGK KK QK  
Sbjct: 358  RRGAQLRKGN-ARSTMSTKISGQNSEVRTSSRSVRKVSYVESDGSEEVDEGKKKKPQKDE 416

Query: 417  XXXXXXXXXXKVLWHQPKGMAEEALRNNESSQPSVLSHLFDSEPDWDEMEFFIKWKGQSY 596
                      KVLWHQPKG AE+A +N  S +P ++SHLFDSEPDW+EMEF IKWKGQS+
Sbjct: 417  IEEEDGDSIEKVLWHQPKGTAEDAAKNGRSKEPVLMSHLFDSEPDWNEMEFLIKWKGQSH 476

Query: 597  LHCQWKSYSDLKNLSGFKKVINYTKRVLEEWKFRNTLSREEVEVHDVGKEMELDLIKQYS 776
            LHCQWKS+++L+NLSGFKKV+NY K+V+E+ +FR  +SREE+E++DV KEM+LD+IKQ S
Sbjct: 477  LHCQWKSFAELQNLSGFKKVLNYAKKVVEDVRFRKMVSREEIELNDVSKEMDLDIIKQNS 536

Query: 777  QVDRIFADRITKNGPDDVMPEYLVKWRGLSYAEATWEKDVDISFAQDAIDEYKAREAAMS 956
            QV+RI ADRI+K+   +V  EYLVKW+GLSYAEATWEKD  I FAQDAIDEYKAREAAM+
Sbjct: 537  QVERIIADRISKDSSGNVTQEYLVKWKGLSYAEATWEKDEIIDFAQDAIDEYKAREAAMA 596

Query: 957  VQGKMVDFQRKKSKGSLRKLDEQP 1028
             QGKMVD QRKK K SLRKLDEQP
Sbjct: 597  EQGKMVDLQRKKGKASLRKLDEQP 620


>ref|XP_004491263.1| PREDICTED: LOW QUALITY PROTEIN: chromodomain-helicase-DNA-binding
            protein 1-like [Cicer arietinum]
          Length = 1738

 Score =  400 bits (1029), Expect = e-109
 Identities = 198/323 (61%), Positives = 253/323 (78%)
 Frame = +3

Query: 60   RKPQRRGRGKVERSLKSVREQKSFSTHNRQRRGKTFLEEEESSEMGSDNDSGDDMKGRSK 239
            +KP+ R + KV +S+KS R++K+     RQRR K+  E+ ES    SD++S DD K   K
Sbjct: 288  KKPKGRQQSKVRKSIKSTRDRKTCVASGRQRRFKSSFEDNESVTEDSDSNSDDDFKSTKK 347

Query: 240  RSTHPRKNNNGRLTLSAKIIEQNGEVRTSSRTVRKVSYVESEESEDIDEGKTKKGQKXXX 419
            RS H RKNN+ R ++S      N EVRTS+R VRK+SYVESEESE+ DEGK KK QK   
Sbjct: 348  RSFHVRKNNS-RFSVS------NSEVRTSTRAVRKISYVESEESEEADEGKKKKSQKEEI 400

Query: 420  XXXXXXXXXKVLWHQPKGMAEEALRNNESSQPSVLSHLFDSEPDWDEMEFFIKWKGQSYL 599
                     KVLWHQ KG AE+A RNN S++PS+ SHLFDSE DW+EMEF IKWKGQS+L
Sbjct: 401  EEDDGDSIEKVLWHQLKGTAEDAQRNNRSTEPSLTSHLFDSEFDWNEMEFLIKWKGQSHL 460

Query: 600  HCQWKSYSDLKNLSGFKKVINYTKRVLEEWKFRNTLSREEVEVHDVGKEMELDLIKQYSQ 779
            HCQWKS+++L+NLSGFKKV+NYTK+++E+ ++R T+SREE+EV+DV KEM+L++I+Q SQ
Sbjct: 461  HCQWKSFAELQNLSGFKKVLNYTKKIMEDIRYRKTISREEIEVYDVSKEMDLEIIRQNSQ 520

Query: 780  VDRIFADRITKNGPDDVMPEYLVKWRGLSYAEATWEKDVDISFAQDAIDEYKAREAAMSV 959
            V+RI +DRI+++   +V+PEYLVKW+GLSYAE TWEKD+DI+FAQ +IDEYKAREAAMS 
Sbjct: 521  VERIISDRISQDNSGNVIPEYLVKWQGLSYAEVTWEKDIDIAFAQHSIDEYKAREAAMSF 580

Query: 960  QGKMVDFQRKKSKGSLRKLDEQP 1028
            QGK+VD QRKKSK SLRKL+EQP
Sbjct: 581  QGKVVDSQRKKSKASLRKLEEQP 603


>ref|XP_003600162.1| DNA-directed RNA polymerase [Medicago truncatula]
            gi|355489210|gb|AES70413.1| DNA-directed RNA polymerase
            [Medicago truncatula]
          Length = 2083

 Score =  398 bits (1022), Expect = e-108
 Identities = 202/325 (62%), Positives = 248/325 (76%), Gaps = 2/325 (0%)
 Frame = +3

Query: 60   RKPQRRGRGKVERSLKSVREQKSFSTHNRQRRGKTFLEEEE--SSEMGSDNDSGDDMKGR 233
            +K + R RGK   S++S R+ K+F+  +RQRR K+  E+E+  S+   SD++S +D K  
Sbjct: 270  KKAKGRQRGKFGPSVRSTRDCKAFTASSRQRRVKSSFEDEDENSTAEDSDSESDEDFKSL 329

Query: 234  SKRSTHPRKNNNGRLTLSAKIIEQNGEVRTSSRTVRKVSYVESEESEDIDEGKTKKGQKX 413
             KR    RKNN GR + +      + EVR+SSRT+RKVSYVES+ESE  DEG TKK QK 
Sbjct: 330  KKRGVRVRKNN-GRSSAATSFSRPSNEVRSSSRTIRKVSYVESDESEGADEG-TKKSQKE 387

Query: 414  XXXXXXXXXXXKVLWHQPKGMAEEALRNNESSQPSVLSHLFDSEPDWDEMEFFIKWKGQS 593
                       KVLWHQPKGMA EA RNN+S +P ++SHLFDSEPDW+ MEF IKWKGQS
Sbjct: 388  EIEVDDGDSVEKVLWHQPKGMAAEAQRNNQSMEPVLMSHLFDSEPDWNNMEFLIKWKGQS 447

Query: 594  YLHCQWKSYSDLKNLSGFKKVINYTKRVLEEWKFRNTLSREEVEVHDVGKEMELDLIKQY 773
            +LHCQWKS+ DL+NLSGFKKV+NYTKRV EE + R  +SREE+EV+DV KEM++D+IKQ 
Sbjct: 448  HLHCQWKSFVDLQNLSGFKKVLNYTKRVTEEIRNRMGISREEIEVNDVSKEMDIDIIKQN 507

Query: 774  SQVDRIFADRITKNGPDDVMPEYLVKWRGLSYAEATWEKDVDISFAQDAIDEYKAREAAM 953
            SQV+RI ADRI+ +   +V PEYLVKW+GLSYAE TWEKD+DI+FAQ  IDEYK REAAM
Sbjct: 508  SQVERIIADRISNDNSGNVFPEYLVKWQGLSYAEVTWEKDIDIAFAQHTIDEYKTREAAM 567

Query: 954  SVQGKMVDFQRKKSKGSLRKLDEQP 1028
            SVQGKMVDFQR++SKGSLRKLDEQP
Sbjct: 568  SVQGKMVDFQRRQSKGSLRKLDEQP 592


>gb|EYU35935.1| hypothetical protein MIMGU_mgv1a000126mg [Mimulus guttatus]
          Length = 1709

 Score =  393 bits (1010), Expect = e-107
 Identities = 191/324 (58%), Positives = 249/324 (76%)
 Frame = +3

Query: 57   IRKPQRRGRGKVERSLKSVREQKSFSTHNRQRRGKTFLEEEESSEMGSDNDSGDDMKGRS 236
            +++ + +   K  R+LKS +E KS ++  R+++ +TF EE+E      ++++G D   R+
Sbjct: 283  LKRNRAKQSSKGGRNLKSTKEPKSVASSTRRKKARTFSEEDEEETSADNSENGSDEDFRN 342

Query: 237  KRSTHPRKNNNGRLTLSAKIIEQNGEVRTSSRTVRKVSYVESEESEDIDEGKTKKGQKXX 416
            +R   P    NG  + S K+  +N E+RTS R+VRKVSYVES+ SED+D+G+ K  +K  
Sbjct: 343  RRRGVPVHRKNGGRSASIKVSGRNNELRTSGRSVRKVSYVESDGSEDLDDGQKKNQKKEE 402

Query: 417  XXXXXXXXXXKVLWHQPKGMAEEALRNNESSQPSVLSHLFDSEPDWDEMEFFIKWKGQSY 596
                      +VLWHQ KG AEEA RNN+S+ P +LS+LFDSE DW+EMEF IKWKGQS+
Sbjct: 403  IEEEDGDAIERVLWHQRKGTAEEAFRNNKSTDPVLLSYLFDSETDWNEMEFLIKWKGQSH 462

Query: 597  LHCQWKSYSDLKNLSGFKKVINYTKRVLEEWKFRNTLSREEVEVHDVGKEMELDLIKQYS 776
            LHCQWKS+S+L+NLSGFKKV+NYTK+V+E+ K+RN +SREE+EV+DV KEM+LD+IKQ S
Sbjct: 463  LHCQWKSFSELQNLSGFKKVLNYTKKVMEDVKYRNLVSREEIEVNDVSKEMDLDIIKQNS 522

Query: 777  QVDRIFADRITKNGPDDVMPEYLVKWRGLSYAEATWEKDVDISFAQDAIDEYKAREAAMS 956
            QV+R+ A+R+ K+   DV PEYLVKW+GLSYAEATWEKD+DISFAQDAIDEYKAREAA  
Sbjct: 523  QVERVIAERLIKDSLGDVGPEYLVKWQGLSYAEATWEKDIDISFAQDAIDEYKAREAAAM 582

Query: 957  VQGKMVDFQRKKSKGSLRKLDEQP 1028
            VQGK VDFQRK+SKGSLRKLDEQP
Sbjct: 583  VQGKTVDFQRKRSKGSLRKLDEQP 606


>ref|XP_003617298.1| Chromodomain-helicase-DNA-binding protein [Medicago truncatula]
            gi|355518633|gb|AET00257.1|
            Chromodomain-helicase-DNA-binding protein [Medicago
            truncatula]
          Length = 1739

 Score =  390 bits (1002), Expect = e-106
 Identities = 190/323 (58%), Positives = 251/323 (77%)
 Frame = +3

Query: 60   RKPQRRGRGKVERSLKSVREQKSFSTHNRQRRGKTFLEEEESSEMGSDNDSGDDMKGRSK 239
            +K + R +GKV +++KS R++K+    +RQRR K+  E+ ES+   SD+ S DD K   K
Sbjct: 288  KKGKGRQQGKVRKNIKSTRDRKACVASSRQRRLKSSFEDNESTTEDSDSVSDDDFKSTRK 347

Query: 240  RSTHPRKNNNGRLTLSAKIIEQNGEVRTSSRTVRKVSYVESEESEDIDEGKTKKGQKXXX 419
            RS + RKNN+ R +++      N +VRTSSR VRK+SYVES+ SE+ D+GK KK QK   
Sbjct: 348  RSFNVRKNNS-RFSVTTSFSAHNSDVRTSSRAVRKISYVESDGSEEADDGKKKKSQKEEI 406

Query: 420  XXXXXXXXXKVLWHQPKGMAEEALRNNESSQPSVLSHLFDSEPDWDEMEFFIKWKGQSYL 599
                     KVLWHQ KG AE+A  NN S++P ++SHLFDSE DW+E+EF IKWKGQS+L
Sbjct: 407  EEDDGDSIEKVLWHQLKGTAEDAQSNNRSTEPVLMSHLFDSEFDWNEIEFLIKWKGQSHL 466

Query: 600  HCQWKSYSDLKNLSGFKKVINYTKRVLEEWKFRNTLSREEVEVHDVGKEMELDLIKQYSQ 779
            HCQWKS+++L+NLSGFKKV+NYTK+++E+ ++R  +SREE+EV+DV KEM+L++I+Q SQ
Sbjct: 467  HCQWKSFAELQNLSGFKKVLNYTKKIMEDIRYRRAISREEIEVYDVSKEMDLEIIRQNSQ 526

Query: 780  VDRIFADRITKNGPDDVMPEYLVKWRGLSYAEATWEKDVDISFAQDAIDEYKAREAAMSV 959
            V+RI ADRI+K+   +V+PEYLVKW+GLSYAE TWEKD+DI+FAQ +IDEYKARE AMSV
Sbjct: 527  VERIIADRISKDNSGNVVPEYLVKWQGLSYAEVTWEKDIDIAFAQHSIDEYKAREVAMSV 586

Query: 960  QGKMVDFQRKKSKGSLRKLDEQP 1028
            QGK+VD QRKKSK SLRKL+EQP
Sbjct: 587  QGKVVDSQRKKSKASLRKLEEQP 609