BLASTX nr result
ID: Cocculus22_contig00020003
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus22_contig00020003
(612 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI26901.3| unnamed protein product [Vitis vinifera] 65 2e-08
ref|XP_006464975.1| PREDICTED: trichohyalin-like [Citrus sinensis] 64 3e-08
emb|CAN79049.1| hypothetical protein VITISV_004868 [Vitis vinifera] 64 3e-08
gb|EYU31828.1| hypothetical protein MIMGU_mgv11b022888mg [Mimulu... 64 4e-08
ref|XP_006360458.1| PREDICTED: histone H1C-like [Solanum tuberosum] 64 4e-08
gb|EYU30063.1| hypothetical protein MIMGU_mgv1a002891mg [Mimulus... 62 1e-07
ref|XP_006360457.1| PREDICTED: histone H1-like [Solanum tuberosum] 62 1e-07
ref|XP_006399390.1| hypothetical protein EUTSA_v10015336mg, part... 62 2e-07
ref|XP_006287726.1| hypothetical protein CARUB_v10000937mg [Caps... 60 5e-07
ref|XP_002871359.1| histone H1/H5 family protein [Arabidopsis ly... 60 5e-07
ref|NP_680160.2| winged-helix DNA-binding transcription factor f... 59 8e-07
emb|CAC35883.1| putative protein [Arabidopsis thaliana] 59 8e-07
ref|XP_007215046.1| hypothetical protein PRUPE_ppa012096mg [Prun... 59 1e-06
gb|EYU24928.1| hypothetical protein MIMGU_mgv1a013363mg [Mimulus... 58 2e-06
ref|XP_007045213.1| HMG-Y-related protein B [Theobroma cacao] gi... 58 2e-06
gb|EYU33118.1| hypothetical protein MIMGU_mgv1a025782mg, partial... 57 4e-06
ref|XP_002531913.1| Histone H1, putative [Ricinus communis] gi|2... 57 4e-06
ref|XP_002315870.2| hypothetical protein POPTR_0010s11980g [Popu... 57 4e-06
ref|XP_004505269.1| PREDICTED: uncharacterized protein LOC101488... 57 5e-06
ref|XP_002311516.1| high-mobility-group family protein [Populus ... 57 5e-06
>emb|CBI26901.3| unnamed protein product [Vitis vinifera]
Length = 422
Score = 65.1 bits (157), Expect = 2e-08
Identities = 50/186 (26%), Positives = 88/186 (47%)
Frame = +2
Query: 2 LNERRGSKEESISNFIKSRHQDLPFAHARLLTHHLEKLIERGEIVFAAKSRYGLPNCNPN 181
L E+RGS E+S+S FIKS ++ +P+AH+ L+HHL KL + G+IV + Y +P NPN
Sbjct: 58 LKEKRGSSEKSLSEFIKSNYE-VPWAHSSYLSHHLCKLAQNGDIVVTSDDHYMIPTGNPN 116
Query: 182 PNFVKQSEQXXXXXXXXXXXXXXXXXXXXEHNGELQLVMRDKMITSPESHLTPLYCYSEG 361
P ++ ++ + N QL ++K++ S Y
Sbjct: 117 PKRKEKQQKRKRHQGRGRRGIYDKEAVVEKKN---QLGEQEKVVIKELSQAQKHENYV-- 171
Query: 362 LDKRRRIDGDRVEEKSKPECLGGQELLVQDEILSVTGDRDDDGSSQLQLAFVTEEERLQD 541
+D D E K++ + GQ+ V+ E+L + DD+ ++ + + + R++D
Sbjct: 172 IDGANEQDYQVNEGKNQSQ---GQQNEVRSELLQSSCLNDDNCATLMVIPVESSSPRVED 228
Query: 542 PNSQNE 559
E
Sbjct: 229 EGESVE 234
>ref|XP_006464975.1| PREDICTED: trichohyalin-like [Citrus sinensis]
Length = 852
Score = 64.3 bits (155), Expect = 3e-08
Identities = 31/54 (57%), Positives = 42/54 (77%)
Frame = +2
Query: 2 LNERRGSKEESISNFIKSRHQDLPFAHARLLTHHLEKLIERGEIVFAAKSRYGL 163
LNE+ GS EE+IS FI++ ++DLPFAHA LLT HL+KL+ +GEIV + + Y L
Sbjct: 241 LNEQGGSSEEAISKFIEAEYEDLPFAHAALLTCHLQKLVIKGEIVSTSANCYML 294
>emb|CAN79049.1| hypothetical protein VITISV_004868 [Vitis vinifera]
Length = 444
Score = 64.3 bits (155), Expect = 3e-08
Identities = 50/186 (26%), Positives = 88/186 (47%)
Frame = +2
Query: 2 LNERRGSKEESISNFIKSRHQDLPFAHARLLTHHLEKLIERGEIVFAAKSRYGLPNCNPN 181
L E+RGS E+S+S FIKS + ++P+AH+ L+HHL KL + G+IV + Y +P NPN
Sbjct: 80 LKEKRGSSEKSLSEFIKS-NXEVPWAHSSYLSHHLCKLAQNGDIVVTSDDHYMIPTGNPN 138
Query: 182 PNFVKQSEQXXXXXXXXXXXXXXXXXXXXEHNGELQLVMRDKMITSPESHLTPLYCYSEG 361
P ++ ++ + N QL ++K++ S Y
Sbjct: 139 PKRKEKQQKRKRHQGRGRRGIYDKEAVVEKKN---QLGEQEKVVIKELSQAQKHENYV-- 193
Query: 362 LDKRRRIDGDRVEEKSKPECLGGQELLVQDEILSVTGDRDDDGSSQLQLAFVTEEERLQD 541
+D D E K++ + GQ+ V+ E+L + DD+ ++ + + + R++D
Sbjct: 194 IDGANEQDYQVNEGKNQSQ---GQQNEVRSELLQSSCLNDDNCATLMVIPVESSSPRVED 250
Query: 542 PNSQNE 559
E
Sbjct: 251 EGESVE 256
>gb|EYU31828.1| hypothetical protein MIMGU_mgv11b022888mg [Mimulus guttatus]
Length = 243
Score = 63.5 bits (153), Expect = 4e-08
Identities = 31/61 (50%), Positives = 37/61 (60%)
Frame = +2
Query: 2 LNERRGSKEESISNFIKSRHQDLPFAHARLLTHHLEKLIERGEIVFAAKSRYGLPNCNPN 181
LNE+ GS E SIS FI ++ DLP AH LL HHL K E G+I +RY L NP+
Sbjct: 9 LNEKEGSTEPSISRFIFEQYNDLPLAHWTLLKHHLNKRCESGDIAMTPGNRYMLARANPS 68
Query: 182 P 184
P
Sbjct: 69 P 69
>ref|XP_006360458.1| PREDICTED: histone H1C-like [Solanum tuberosum]
Length = 221
Score = 63.5 bits (153), Expect = 4e-08
Identities = 31/62 (50%), Positives = 38/62 (61%)
Frame = +2
Query: 2 LNERRGSKEESISNFIKSRHQDLPFAHARLLTHHLEKLIERGEIVFAAKSRYGLPNCNPN 181
L+E GS E+SIS FI + LP AH +L HHLEK+ ERGEIV R+ LP + N
Sbjct: 59 LDEEGGSNEDSISEFIMKNNDSLPRAHTTMLKHHLEKMCERGEIVMIDGGRFSLPGDSKN 118
Query: 182 PN 187
N
Sbjct: 119 SN 120
>gb|EYU30063.1| hypothetical protein MIMGU_mgv1a002891mg [Mimulus guttatus]
Length = 628
Score = 62.4 bits (150), Expect = 1e-07
Identities = 28/54 (51%), Positives = 40/54 (74%)
Frame = +2
Query: 2 LNERRGSKEESISNFIKSRHQDLPFAHARLLTHHLEKLIERGEIVFAAKSRYGL 163
L+E++GS E+SIS F++ +++LP+AH+ LL HHL+KL E GEI SRY L
Sbjct: 90 LSEKQGSSEDSISQFLEKEYENLPWAHSMLLKHHLQKLCESGEIAVTRHSRYML 143
>ref|XP_006360457.1| PREDICTED: histone H1-like [Solanum tuberosum]
Length = 225
Score = 62.0 bits (149), Expect = 1e-07
Identities = 31/62 (50%), Positives = 38/62 (61%)
Frame = +2
Query: 2 LNERRGSKEESISNFIKSRHQDLPFAHARLLTHHLEKLIERGEIVFAAKSRYGLPNCNPN 181
L+E GS E+SIS FI + LP AH +L HHLEK+ ERGEIV R+ LP + N
Sbjct: 59 LDEEGGSNEDSISEFIMKNNDSLPRAHTTMLKHHLEKMCERGEIVMIDGGRFLLPGDSEN 118
Query: 182 PN 187
N
Sbjct: 119 SN 120
>ref|XP_006399390.1| hypothetical protein EUTSA_v10015336mg, partial [Eutrema
salsugineum] gi|557100480|gb|ESQ40843.1| hypothetical
protein EUTSA_v10015336mg, partial [Eutrema salsugineum]
Length = 465
Score = 61.6 bits (148), Expect = 2e-07
Identities = 27/45 (60%), Positives = 38/45 (84%)
Frame = +2
Query: 2 LNERRGSKEESISNFIKSRHQDLPFAHARLLTHHLEKLIERGEIV 136
LN+ GS+EE+IS FIKS++++LPFAH LL+HHL KL+E+ EI+
Sbjct: 69 LNKEGGSREEAISEFIKSKYRNLPFAHTSLLSHHLAKLVEKREIL 113
>ref|XP_006287726.1| hypothetical protein CARUB_v10000937mg [Capsella rubella]
gi|482556432|gb|EOA20624.1| hypothetical protein
CARUB_v10000937mg [Capsella rubella]
Length = 452
Score = 60.1 bits (144), Expect = 5e-07
Identities = 30/56 (53%), Positives = 40/56 (71%), Gaps = 1/56 (1%)
Frame = +2
Query: 2 LNERRGSKEESISNFIKSRHQDLPFAHARLLTHHLEKLIERGEIVFAAKS-RYGLP 166
LN GS EE+IS FIKS++++LPFAH LL HHL KL+E+ EI++ + Y LP
Sbjct: 69 LNTEGGSCEEAISEFIKSKYKNLPFAHTSLLIHHLAKLVEKKEILYDCNTFCYSLP 124
>ref|XP_002871359.1| histone H1/H5 family protein [Arabidopsis lyrata subsp. lyrata]
gi|297317196|gb|EFH47618.1| histone H1/H5 family protein
[Arabidopsis lyrata subsp. lyrata]
Length = 460
Score = 60.1 bits (144), Expect = 5e-07
Identities = 30/56 (53%), Positives = 40/56 (71%), Gaps = 1/56 (1%)
Frame = +2
Query: 2 LNERRGSKEESISNFIKSRHQDLPFAHARLLTHHLEKLIERGEIVFAAKSR-YGLP 166
LNE G+ E+ IS FIKS++++LPFAH LL+HHL KL+E+ EI+ S Y LP
Sbjct: 69 LNEEGGASEDVISEFIKSKYKNLPFAHKSLLSHHLAKLVEKREILCDCNSYCYSLP 124
>ref|NP_680160.2| winged-helix DNA-binding transcription factor family protein
[Arabidopsis thaliana] gi|50897176|gb|AAT85727.1|
At5g08780 [Arabidopsis thaliana]
gi|53828619|gb|AAU94419.1| At5g08780 [Arabidopsis
thaliana] gi|332003966|gb|AED91349.1| winged-helix
DNA-binding transcription factor family protein
[Arabidopsis thaliana]
Length = 457
Score = 59.3 bits (142), Expect = 8e-07
Identities = 28/56 (50%), Positives = 41/56 (73%), Gaps = 1/56 (1%)
Frame = +2
Query: 2 LNERRGSKEESISNFIKSRHQDLPFAHARLLTHHLEKLIERGEIVFAAKSR-YGLP 166
LN+ G+ E++IS FIKS++++LPFAH LL+HHL KL+E+ EI+ + Y LP
Sbjct: 69 LNKEGGASEDAISEFIKSKYKNLPFAHTNLLSHHLAKLVEKREILCDCNNDCYSLP 124
>emb|CAC35883.1| putative protein [Arabidopsis thaliana]
Length = 463
Score = 59.3 bits (142), Expect = 8e-07
Identities = 28/56 (50%), Positives = 41/56 (73%), Gaps = 1/56 (1%)
Frame = +2
Query: 2 LNERRGSKEESISNFIKSRHQDLPFAHARLLTHHLEKLIERGEIVFAAKSR-YGLP 166
LN+ G+ E++IS FIKS++++LPFAH LL+HHL KL+E+ EI+ + Y LP
Sbjct: 69 LNKEGGASEDAISEFIKSKYKNLPFAHTNLLSHHLAKLVEKREILCDCNNDCYSLP 124
>ref|XP_007215046.1| hypothetical protein PRUPE_ppa012096mg [Prunus persica]
gi|462411196|gb|EMJ16245.1| hypothetical protein
PRUPE_ppa012096mg [Prunus persica]
Length = 183
Score = 58.5 bits (140), Expect = 1e-06
Identities = 30/61 (49%), Positives = 40/61 (65%)
Frame = +2
Query: 2 LNERRGSKEESISNFIKSRHQDLPFAHARLLTHHLEKLIERGEIVFAAKSRYGLPNCNPN 181
LNE+ GS + SIS FI+S + DLP H LL+HHL K+ + GE+VF K+ Y P+ N
Sbjct: 26 LNEKNGSNKSSISKFIESTYGDLPAGHNSLLSHHLNKMKDSGELVF-WKNNYTKPDPNAP 84
Query: 182 P 184
P
Sbjct: 85 P 85
>gb|EYU24928.1| hypothetical protein MIMGU_mgv1a013363mg [Mimulus guttatus]
Length = 222
Score = 57.8 bits (138), Expect = 2e-06
Identities = 29/61 (47%), Positives = 40/61 (65%)
Frame = +2
Query: 2 LNERRGSKEESISNFIKSRHQDLPFAHARLLTHHLEKLIERGEIVFAAKSRYGLPNCNPN 181
LNE +GS + SIS I+ H DLP AH+ LLTHHL K+ G+++F +K+ Y P+ N
Sbjct: 43 LNEDQGSNKSSISKQIEDTHGDLPPAHSTLLTHHLNKMKSSGQLIF-SKNSYRKPDTNSP 101
Query: 182 P 184
P
Sbjct: 102 P 102
>ref|XP_007045213.1| HMG-Y-related protein B [Theobroma cacao]
gi|508709148|gb|EOY01045.1| HMG-Y-related protein B
[Theobroma cacao]
Length = 190
Score = 57.8 bits (138), Expect = 2e-06
Identities = 29/61 (47%), Positives = 41/61 (67%)
Frame = +2
Query: 2 LNERRGSKEESISNFIKSRHQDLPFAHARLLTHHLEKLIERGEIVFAAKSRYGLPNCNPN 181
LNE+ GS + +IS I+S H DLP AH+ LL+HHL K+ + G+IV +K+ Y P+ N
Sbjct: 35 LNEKAGSNKSAISKHIESTHPDLPAAHSTLLSHHLNKMKQSGQIVM-SKNNYLKPDPNAP 93
Query: 182 P 184
P
Sbjct: 94 P 94
>gb|EYU33118.1| hypothetical protein MIMGU_mgv1a025782mg, partial [Mimulus
guttatus]
Length = 172
Score = 57.0 bits (136), Expect = 4e-06
Identities = 29/61 (47%), Positives = 40/61 (65%)
Frame = +2
Query: 2 LNERRGSKEESISNFIKSRHQDLPFAHARLLTHHLEKLIERGEIVFAAKSRYGLPNCNPN 181
LNE +GS + SIS I+ H DLP AH+ LLTHHL K+ G+++F +K+ Y P+ N
Sbjct: 43 LNEDQGSNKSSISKQIEDTHGDLPPAHSTLLTHHLNKMKSSGQLIF-SKNCYRKPDTNSP 101
Query: 182 P 184
P
Sbjct: 102 P 102
>ref|XP_002531913.1| Histone H1, putative [Ricinus communis] gi|223528423|gb|EEF30457.1|
Histone H1, putative [Ricinus communis]
Length = 166
Score = 57.0 bits (136), Expect = 4e-06
Identities = 27/61 (44%), Positives = 42/61 (68%)
Frame = +2
Query: 2 LNERRGSKEESISNFIKSRHQDLPFAHARLLTHHLEKLIERGEIVFAAKSRYGLPNCNPN 181
L+++ GS + SIS +I+S++ DLP H LLTHHL ++ + GE+VF K+ Y +P+ N
Sbjct: 27 LDDKNGSNKTSISKYIESKYGDLPAGHTALLTHHLARMKDTGELVF-WKNNYMIPDPNAP 85
Query: 182 P 184
P
Sbjct: 86 P 86
>ref|XP_002315870.2| hypothetical protein POPTR_0010s11980g [Populus trichocarpa]
gi|118485070|gb|ABK94398.1| unknown [Populus
trichocarpa] gi|550329615|gb|EEF02041.2| hypothetical
protein POPTR_0010s11980g [Populus trichocarpa]
Length = 215
Score = 57.0 bits (136), Expect = 4e-06
Identities = 30/61 (49%), Positives = 39/61 (63%)
Frame = +2
Query: 2 LNERRGSKEESISNFIKSRHQDLPFAHARLLTHHLEKLIERGEIVFAAKSRYGLPNCNPN 181
LNE+ GS + SIS I+S H DLP AH LL+HHL KL + G++V K+ Y P+ N
Sbjct: 58 LNEKEGSSKTSISKQIESTHPDLPPAHGTLLSHHLNKLKQSGQLVL-VKNNYMKPDPNAP 116
Query: 182 P 184
P
Sbjct: 117 P 117
>ref|XP_004505269.1| PREDICTED: uncharacterized protein LOC101488999 [Cicer arietinum]
Length = 362
Score = 56.6 bits (135), Expect = 5e-06
Identities = 24/55 (43%), Positives = 39/55 (70%)
Frame = +2
Query: 2 LNERRGSKEESISNFIKSRHQDLPFAHARLLTHHLEKLIERGEIVFAAKSRYGLP 166
LN+ +GS EE+IS FI+ ++DLP+AH+++L+ HLE+L + GE+ +Y P
Sbjct: 9 LNDEKGSMEEAISEFIRREYEDLPWAHSKILSVHLERLCQVGELACNEDGKYVFP 63
>ref|XP_002311516.1| high-mobility-group family protein [Populus trichocarpa]
gi|222851336|gb|EEE88883.1| high-mobility-group family
protein [Populus trichocarpa]
Length = 207
Score = 56.6 bits (135), Expect = 5e-06
Identities = 29/61 (47%), Positives = 40/61 (65%)
Frame = +2
Query: 2 LNERRGSKEESISNFIKSRHQDLPFAHARLLTHHLEKLIERGEIVFAAKSRYGLPNCNPN 181
LNE+ GS + SIS I+S H DLP AH+ LL+HHL K+ + G++V K+ Y P+ N
Sbjct: 50 LNEKEGSNKTSISKQIESTHPDLPPAHSTLLSHHLNKMKQSGQLVL-VKNNYMKPDPNAP 108
Query: 182 P 184
P
Sbjct: 109 P 109