BLASTX nr result
ID: Cocculus22_contig00019900
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus22_contig00019900
(702 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|YP_740623.1| hypothetical chloroplast RF1 [Platanus occident... 263 4e-68
gb|ADD30913.1| putative RF1 protein [Berberidopsis corallina] 262 9e-68
ref|YP_008081515.1| hypothetical chloroplast RF1 (chloroplast) [... 261 1e-67
ref|YP_008993578.1| hypothetical chloroplast RF19 (chloroplast) ... 255 1e-65
gb|AEX98391.1| photosystem I assembly protein Ycf1 (chloroplast)... 255 1e-65
ref|YP_006576172.1| Ycf1 (chloroplast) [Magnolia denudata] gi|34... 255 1e-65
ref|YP_008081424.1| hypothetical chloroplast RF1 (chloroplast) [... 254 1e-65
ref|YP_740260.1| hypothetical chloroplast RF1 [Liriodendron tuli... 254 3e-65
ref|YP_008993750.1| hypothetical chloroplast RF19 (chloroplast) ... 251 2e-64
ref|YP_008993922.1| hypothetical chloroplast RF19 (chloroplast) ... 251 2e-64
ref|YP_008963750.1| hypothetical chloroplast RF19 (chloroplast) ... 251 2e-64
ref|YP_007474425.1| hypothetical chloroplast RF1 (chloroplast) [... 251 2e-64
ref|YP_004769771.1| hypothetical chloroplast RF19 [Magnolia kwan... 251 2e-64
gb|ADD30919.1| putative RF1 protein [Liquidambar styraciflua] 251 2e-64
ref|YP_009026939.1| photosystem I assembly protein Ycf1 [Magnoli... 250 4e-64
ref|YP_008993320.1| hypothetical chloroplast RF19 (chloroplast) ... 249 6e-64
gb|ADD30912.1| putative RF1 protein [Ximenia americana] 249 6e-64
ref|YP_784445.1| hypothetical protein RF1 [Drimys granadensis] g... 249 6e-64
ref|YP_008993492.1| hypothetical chloroplast RF19 (chloroplast) ... 249 8e-64
ref|YP_008993406.1| hypothetical chloroplast RF19 (chloroplast) ... 249 8e-64
>ref|YP_740623.1| hypothetical chloroplast RF1 [Platanus occidentalis]
gi|118574761|sp|Q09FY8.1|YCF1_PLAOC RecName:
Full=Putative membrane protein ycf1; Short=RF1
gi|114054443|gb|ABI49837.1| hypothetical chloroplast RF1
[Platanus occidentalis]
Length = 1915
Score = 263 bits (672), Expect = 4e-68
Identities = 144/237 (60%), Positives = 177/237 (74%), Gaps = 5/237 (2%)
Frame = +3
Query: 6 PFGSPRKQPSFFEPIXXXXXXXXXXXXXXXXXALRILKERAKWFLKVSKEKTRWIIQTIR 185
PFGSPR QPSFFEPI LR++KER KWFL V KEK RW+I+ I
Sbjct: 946 PFGSPRNQPSFFEPILKELEKKIRKVKNQFFRILRVVKERTKWFLTVLKEKKRWVIEIIL 1005
Query: 186 FLKRIMKDLAKRNPILLFGLREVYESSQKKN-ENGKNRI-IISNPIIHESSIQLRPMDWT 359
F+KRIMK+LAK NPILLFGL+EVYESS+ KN +N +N I IISN IIHES I++R DWT
Sbjct: 1006 FIKRIMKELAKINPILLFGLKEVYESSENKNRKNSQNSITIISNQIIHESPIRIRSTDWT 1065
Query: 360 HYL--LTEKKITDLADRTTTIRNQIEKITKDRKKIFLTLDINISPNKKNLDNIKFESPKN 533
+Y LTEKK+ +LADRT+TIRNQIE+ITKD+KKIFLT +INISP K + + + ES K+
Sbjct: 1066 NYYYSLTEKKMKNLADRTSTIRNQIERITKDKKKIFLTPEINISPKKMSCGDKRSESLKS 1125
Query: 534 SWQILKRKSTRFIRQWHYFMQFLIVIEKTYMDTLLCIINITRINVQPFLES-KKIIE 701
W+I+K++S R IR+WH+F++F VIEK Y LLCIINI RIN Q FLES KKI++
Sbjct: 1126 FWEIVKKRSIRLIRKWHFFLKF--VIEKIY---LLCIINIPRINAQLFLESTKKILD 1177
>gb|ADD30913.1| putative RF1 protein [Berberidopsis corallina]
Length = 1909
Score = 262 bits (669), Expect = 9e-68
Identities = 137/233 (58%), Positives = 172/233 (73%), Gaps = 1/233 (0%)
Frame = +3
Query: 6 PFGSPRKQPSFFEPIXXXXXXXXXXXXXXXXXALRILKERAKWFLKVSKEKTRWIIQTIR 185
PFGSPRK+PSFFEPI LR LKER FL+VSKEK +W+++++
Sbjct: 956 PFGSPRKRPSFFEPIFKELEKKIIKLKKKCFLVLRGLKERTNLFLEVSKEKKKWVLKSVL 1015
Query: 186 FLKRIMKDLAKRNPILLFGLREVYESSQKKNENGKNRIIISNPIIHESSIQLRPMDWTHY 365
F+KRI K+L+K NPILLF LREVYESS+ + E IISN +IHESSIQ+R MDWT+Y
Sbjct: 1016 FIKRITKELSKANPILLFRLREVYESSETQKEKD---YIISNRMIHESSIQIRSMDWTNY 1072
Query: 366 LLTEKKITDLADRTTTIRNQIEKITKDRKKIFLTLDINISPNKKNLDNIKFESPKNSWQI 545
LTEKK+ DL DRT+TIRNQIE+ITKD+KK FL +INISPNK + D + ESPKN WQ+
Sbjct: 1073 SLTEKKMKDLTDRTSTIRNQIERITKDKKKGFLIPEINISPNKTSYDAKRLESPKNIWQV 1132
Query: 546 LKRKSTRFIRQWHYFMQFLIVIEKTYMDTLLCIINITRINVQPFLES-KKIIE 701
+KR++ R IR+ HYF++FL IE+ Y+D LCIINI R+N Q FLES KK+I+
Sbjct: 1133 VKRRNARLIRKSHYFLKFL--IERIYIDIFLCIINIPRVNAQLFLESTKKMID 1183
>ref|YP_008081515.1| hypothetical chloroplast RF1 (chloroplast) [Trochodendron aralioides]
gi|290489080|gb|ADD30924.1| putative RF1 protein
[Trochodendron aralioides] gi|479279354|gb|AGJ72207.1|
hypothetical chloroplast RF1 (chloroplast) [Trochodendron
aralioides]
Length = 1896
Score = 261 bits (668), Expect = 1e-67
Identities = 134/229 (58%), Positives = 170/229 (74%)
Frame = +3
Query: 6 PFGSPRKQPSFFEPIXXXXXXXXXXXXXXXXXALRILKERAKWFLKVSKEKTRWIIQTIR 185
PFGSPRK+PSFFEPI L++LKER K FL+VSKE T W+I+ +
Sbjct: 937 PFGSPRKRPSFFEPICKELEKKIRKVKKKSFLVLKVLKERTKLFLRVSKEITGWVIKRVL 996
Query: 186 FLKRIMKDLAKRNPILLFGLREVYESSQKKNENGKNRIIISNPIIHESSIQLRPMDWTHY 365
F+KRIMK+ AK N I FG REVY+SS+ KN II+N +IH+SSI++R MDWT+Y
Sbjct: 997 FIKRIMKEFAKVNLIRFFGFREVYQSSENKNRKDS---IINNKMIHKSSIRIRYMDWTNY 1053
Query: 366 LLTEKKITDLADRTTTIRNQIEKITKDRKKIFLTLDINISPNKKNLDNIKFESPKNSWQI 545
LTEKK+ DLADRT+TIRN+IE+ITKD+KK FLT +INI+PN+++ D+ + ESP+N WQI
Sbjct: 1054 SLTEKKMKDLADRTSTIRNKIERITKDKKKKFLTREININPNERSCDDKRLESPQNIWQI 1113
Query: 546 LKRKSTRFIRQWHYFMQFLIVIEKTYMDTLLCIINITRINVQPFLESKK 692
+KR+S R IR+W+YFMQF IEK Y+DTLL IINI+R N Q FLES K
Sbjct: 1114 VKRRSARLIRKWNYFMQFF--IEKIYIDTLLSIINISRSNAQLFLESTK 1160
>ref|YP_008993578.1| hypothetical chloroplast RF19 (chloroplast) [Magnolia liliifera]
Length = 1852
Score = 255 bits (651), Expect = 1e-65
Identities = 137/235 (58%), Positives = 167/235 (71%), Gaps = 3/235 (1%)
Frame = +3
Query: 6 PFGSPRKQPSFFEPIXXXXXXXXXXXXXXXXXALRILKERAKWFLKVSKEKTRWIIQTIR 185
PFGSPRK+PSFF+PI LR L ER KWFL+V KEKTRWI++T+
Sbjct: 914 PFGSPRKRPSFFDPIWKELEKKIRKVKKKCFLVLRALGERKKWFLRVLKEKTRWILKTVL 973
Query: 186 FLKRIMKDLAKRNPILLFGLREVYESSQKKNENGKNRIIISNPIIHESSIQLRPMDWTHY 365
F+KRI+K+ AK NPI LFGLR+VYE NEN K+ II SN I HES I++R +DWT+Y
Sbjct: 974 FIKRIIKEFAKVNPIFLFGLRKVYEP----NENRKDSII-SNKINHESIIRIRSVDWTNY 1028
Query: 366 LLTEKKITDLADRTTTIRNQIEKITKDRKKIFLTLDINISPNKKNLDNIKFESPKNSWQI 545
LTEKK+ DLADRTTTIRN+IE+ITKD++KIFLT + ISPN+ D+ + ES K+ WQI
Sbjct: 1029 SLTEKKMKDLADRTTTIRNKIERITKDKRKIFLTPNRKISPNETGCDDKRSESQKHIWQI 1088
Query: 546 LKRKSTRFIRQWHYFMQFLIVIEKTYMDTLLCIINITRINVQPFLE---SKKIIE 701
KR R IR+WHYFM+ IE+ YMD LC INI RIN QPFLE +KKII+
Sbjct: 1089 SKRGGARLIRKWHYFMKSF--IERIYMDIFLCNINIPRINAQPFLEFESTKKIID 1141
>gb|AEX98391.1| photosystem I assembly protein Ycf1 (chloroplast) [Magnolia denudata]
Length = 1863
Score = 255 bits (651), Expect = 1e-65
Identities = 137/235 (58%), Positives = 167/235 (71%), Gaps = 3/235 (1%)
Frame = +3
Query: 6 PFGSPRKQPSFFEPIXXXXXXXXXXXXXXXXXALRILKERAKWFLKVSKEKTRWIIQTIR 185
PFGSPRK+PSFF+PI LR L ER KWFL+V KEKTRWI++T+
Sbjct: 926 PFGSPRKRPSFFDPIWKELEKKIRKVKKKCFLVLRALGERKKWFLRVLKEKTRWILKTVL 985
Query: 186 FLKRIMKDLAKRNPILLFGLREVYESSQKKNENGKNRIIISNPIIHESSIQLRPMDWTHY 365
F+KRI+K+ AK NPI LFGLR+VYE NEN K+ II SN I HES I++R +DWT+Y
Sbjct: 986 FIKRIIKEFAKVNPIFLFGLRKVYEP----NENRKDSII-SNKINHESIIRIRSVDWTNY 1040
Query: 366 LLTEKKITDLADRTTTIRNQIEKITKDRKKIFLTLDINISPNKKNLDNIKFESPKNSWQI 545
LTEKK+ DLADRTTTIRN+IE+ITKD++KIFLT + ISPN+ D+ + ES K+ WQI
Sbjct: 1041 SLTEKKMKDLADRTTTIRNKIERITKDKRKIFLTPNRKISPNETGCDDKRSESQKHIWQI 1100
Query: 546 LKRKSTRFIRQWHYFMQFLIVIEKTYMDTLLCIINITRINVQPFLE---SKKIIE 701
KR R IR+WHYFM+ IE+ YMD LC INI RIN QPFLE +KKII+
Sbjct: 1101 SKRGGARLIRKWHYFMKSF--IERIYMDIFLCNINIPRINAQPFLEFESTKKIID 1153
>ref|YP_006576172.1| Ycf1 (chloroplast) [Magnolia denudata] gi|343887596|gb|AEM65275.1|
Ycf1 [Magnolia denudata]
Length = 1863
Score = 255 bits (651), Expect = 1e-65
Identities = 137/235 (58%), Positives = 167/235 (71%), Gaps = 3/235 (1%)
Frame = +3
Query: 6 PFGSPRKQPSFFEPIXXXXXXXXXXXXXXXXXALRILKERAKWFLKVSKEKTRWIIQTIR 185
PFGSPRK+PSFF+PI LR L ER KWFL+V KEKTRWI++T+
Sbjct: 926 PFGSPRKRPSFFDPIWKELEKKIRKVKKKCFLVLRALGERKKWFLRVLKEKTRWILKTVL 985
Query: 186 FLKRIMKDLAKRNPILLFGLREVYESSQKKNENGKNRIIISNPIIHESSIQLRPMDWTHY 365
F+KRI+K+ AK NPI LFGLR+VYE NEN K+ II SN I HES I++R +DWT+Y
Sbjct: 986 FIKRIIKEFAKVNPIFLFGLRKVYEP----NENRKDSII-SNKINHESIIRIRSVDWTNY 1040
Query: 366 LLTEKKITDLADRTTTIRNQIEKITKDRKKIFLTLDINISPNKKNLDNIKFESPKNSWQI 545
LTEKK+ DLADRTTTIRN+IE+ITKD++KIFLT + ISPN+ D+ + ES K+ WQI
Sbjct: 1041 SLTEKKMKDLADRTTTIRNKIERITKDKRKIFLTPNRKISPNETGCDDKRSESQKHIWQI 1100
Query: 546 LKRKSTRFIRQWHYFMQFLIVIEKTYMDTLLCIINITRINVQPFLE---SKKIIE 701
KR R IR+WHYFM+ IE+ YMD LC INI RIN QPFLE +KKII+
Sbjct: 1101 SKRGGARLIRKWHYFMKSF--IERIYMDIFLCNINIPRINAQPFLEFESTKKIID 1153
>ref|YP_008081424.1| hypothetical chloroplast RF1 (chloroplast) [Tetracentron sinense]
gi|479279261|gb|AGJ72115.1| hypothetical chloroplast RF1
(chloroplast) [Tetracentron sinense]
Length = 1895
Score = 254 bits (650), Expect = 1e-65
Identities = 133/232 (57%), Positives = 174/232 (75%)
Frame = +3
Query: 6 PFGSPRKQPSFFEPIXXXXXXXXXXXXXXXXXALRILKERAKWFLKVSKEKTRWIIQTIR 185
PFGSPRK+PSFFEPI L++LKER K FL+V KE T W+I+ +
Sbjct: 935 PFGSPRKRPSFFEPIWKELEKKIRKVKKKSFLVLKLLKERTKLFLRVLKEITGWVIKRVL 994
Query: 186 FLKRIMKDLAKRNPILLFGLREVYESSQKKNENGKNRIIISNPIIHESSIQLRPMDWTHY 365
F+KRI+K+ AK N I LFG EVYESS+ N+NGK+ II+N +IH+SSI++R MDWT+Y
Sbjct: 995 FIKRIIKEFAKVNLIRLFGFSEVYESSE--NQNGKD-FIINNQMIHKSSIRIRYMDWTNY 1051
Query: 366 LLTEKKITDLADRTTTIRNQIEKITKDRKKIFLTLDINISPNKKNLDNIKFESPKNSWQI 545
LTEKK+ DLADRT+TIRN+IE+ITKD++K FLT +INISPN+++ D+ + ESP+N W+I
Sbjct: 1052 SLTEKKMKDLADRTSTIRNKIERITKDKRKKFLTREINISPNERSCDDKRLESPQNIWRI 1111
Query: 546 LKRKSTRFIRQWHYFMQFLIVIEKTYMDTLLCIINITRINVQPFLESKKIIE 701
+KR+S R IR+W+ FMQF I+K Y+DTLL IINI+R N Q FLES K I+
Sbjct: 1112 IKRRSARLIRKWNSFMQFF--IQKIYIDTLLSIINISRSNAQLFLESTKKIK 1161
>ref|YP_740260.1| hypothetical chloroplast RF1 [Liriodendron tulipifera]
gi|118574755|sp|Q0G9G1.1|YCF1_LIRTU RecName:
Full=Putative membrane protein ycf1; Short=RF1
gi|113201052|gb|ABI32567.1| hypothetical chloroplast RF1
[Liriodendron tulipifera]
Length = 1835
Score = 254 bits (648), Expect = 3e-65
Identities = 137/233 (58%), Positives = 166/233 (71%), Gaps = 1/233 (0%)
Frame = +3
Query: 6 PFGSPRKQPSFFEPIXXXXXXXXXXXXXXXXXALRILKERAKWFLKVSKEKTRWIIQTIR 185
PFGS RK+PSFFEPI LR L ER KWFL+V KEKTRWI++T+
Sbjct: 899 PFGSSRKRPSFFEPICKELEKKIRKVKKKCFLVLRALGERTKWFLRVLKEKTRWILKTVL 958
Query: 186 FLKRIMKDLAKRNPILLFGLREVYESSQKKNENGKNRIIISNPIIHESSIQLRPMDWTHY 365
F+KRI+K+ AK NPILLFGLR+VYE NEN K+ I +N I HES I++R +DWT+Y
Sbjct: 959 FIKRIIKEFAKVNPILLFGLRKVYEP----NENRKDSIT-NNKINHESIIRIRSVDWTNY 1013
Query: 366 LLTEKKITDLADRTTTIRNQIEKITKDRKKIFLTLDINISPNKKNLDNIKFESPKNSWQI 545
LTEKK+ DLADRTTTIRN+IE+ITKD++KIFLT DI ISPN+ D+ + ES K+ WQI
Sbjct: 1014 SLTEKKMKDLADRTTTIRNKIERITKDKRKIFLTPDIKISPNETGCDDKRSESQKHIWQI 1073
Query: 546 LKRKSTRFIRQWHYFMQFLIVIEKTYMDTLLCIINITRINVQPFLES-KKIIE 701
KR+S R IR+WHYFM+ IE+ YMD LC INI R N FLES KKII+
Sbjct: 1074 SKRRSARLIRKWHYFMKSF--IERIYMDIFLCTINIPRRNAHLFLESTKKIID 1124
>ref|YP_008993750.1| hypothetical chloroplast RF19 (chloroplast) [Magnolia salicifolia]
Length = 1858
Score = 251 bits (641), Expect = 2e-64
Identities = 136/235 (57%), Positives = 166/235 (70%), Gaps = 3/235 (1%)
Frame = +3
Query: 6 PFGSPRKQPSFFEPIXXXXXXXXXXXXXXXXXALRILKERAKWFLKVSKEKTRWIIQTIR 185
PFGSPRK+PSFF+PI LR L ER KWFL+V KEKTRWI++T+
Sbjct: 920 PFGSPRKRPSFFDPIWKELEKKIRKVKKKCFLVLRALVERKKWFLRVLKEKTRWILKTVL 979
Query: 186 FLKRIMKDLAKRNPILLFGLREVYESSQKKNENGKNRIIISNPIIHESSIQLRPMDWTHY 365
F+KRI+K+ AK NPI LFGLR+VYE NEN K+ II SN I HES I++R +DWT+Y
Sbjct: 980 FIKRIIKEFAKVNPIFLFGLRKVYEP----NENRKDSII-SNKINHESIIRIRSVDWTNY 1034
Query: 366 LLTEKKITDLADRTTTIRNQIEKITKDRKKIFLTLDINISPNKKNLDNIKFESPKNSWQI 545
LTEKK+ DLADRTTTIRN+IE+ITKD++KIFLT + ISPN+ D+ + ES K+ WQI
Sbjct: 1035 SLTEKKMKDLADRTTTIRNKIERITKDKRKIFLTPNRKISPNETGCDDKRSESQKHIWQI 1094
Query: 546 LKRKSTRFIRQWHYFMQFLIVIEKTYMDTLLCIINITRINVQPFLE---SKKIIE 701
KR R IR+WHYFM+ IE+ YMD LC INI RIN Q FLE +KKII+
Sbjct: 1095 SKRGGARLIRKWHYFMKSF--IERIYMDIFLCNINIPRINAQLFLEFESTKKIID 1147
>ref|YP_008993922.1| hypothetical chloroplast RF19 (chloroplast) [Magnolia sprengeri]
Length = 1846
Score = 251 bits (641), Expect = 2e-64
Identities = 136/235 (57%), Positives = 166/235 (70%), Gaps = 3/235 (1%)
Frame = +3
Query: 6 PFGSPRKQPSFFEPIXXXXXXXXXXXXXXXXXALRILKERAKWFLKVSKEKTRWIIQTIR 185
PFGSPRK+PSFF+PI LR L ER KWFL+V KEKTRWI++T+
Sbjct: 908 PFGSPRKRPSFFDPIWKELEKKIRKVKKKCFLVLRALGERKKWFLRVLKEKTRWILKTVL 967
Query: 186 FLKRIMKDLAKRNPILLFGLREVYESSQKKNENGKNRIIISNPIIHESSIQLRPMDWTHY 365
F+KRI+K+ AK NPI LFGLR+VYE NEN K+ II SN I HES I++R +DWT+Y
Sbjct: 968 FIKRIIKEFAKVNPIFLFGLRKVYEP----NENRKDSII-SNKINHESIIRIRSVDWTNY 1022
Query: 366 LLTEKKITDLADRTTTIRNQIEKITKDRKKIFLTLDINISPNKKNLDNIKFESPKNSWQI 545
LTEKK+ DLADRTTTIRN+IE+ITKD++KIFLT + ISPN+ D+ + ES K+ WQI
Sbjct: 1023 SLTEKKMKDLADRTTTIRNKIERITKDKRKIFLTPNRKISPNETGCDDKRSESQKHIWQI 1082
Query: 546 LKRKSTRFIRQWHYFMQFLIVIEKTYMDTLLCIINITRINVQPFLE---SKKIIE 701
KR R IR+WHYFM+ IE+ YMD LC INI RIN Q FLE +KKII+
Sbjct: 1083 SKRGGARLIRKWHYFMKSF--IERIYMDIFLCNINIPRINAQLFLEFESTKKIID 1135
>ref|YP_008963750.1| hypothetical chloroplast RF19 (chloroplast) [Liquidambar formosana]
gi|491650429|gb|AGL13489.1| hypothetical chloroplast RF19
(chloroplast) [Liquidambar formosana]
Length = 1878
Score = 251 bits (641), Expect = 2e-64
Identities = 138/230 (60%), Positives = 167/230 (72%), Gaps = 1/230 (0%)
Frame = +3
Query: 6 PFGSPRKQPSFFEPIXXXXXXXXXXXXXXXXXALRILKERAKWFLKVSKEKTRWIIQTIR 185
PFGSPRK+PSFFEPI LR+LKE+ K+FL V+KE W+I+++
Sbjct: 943 PFGSPRKKPSFFEPIFKELGKKIRKLKKNCFGVLRVLKEKTKFFLTVAKEIKEWVIKSVL 1002
Query: 186 FLKRIMKDLAKRNPILLFGLREVYESSQKKNENGKNRIII-SNPIIHESSIQLRPMDWTH 362
F+KRI L+K NPI LFGLREVYESS+ K E K+ II SN IIHESSIQ R MDWT+
Sbjct: 1003 FIKRI---LSKINPIQLFGLREVYESSETKKE--KDFIISNSNRIIHESSIQFRSMDWTN 1057
Query: 363 YLLTEKKITDLADRTTTIRNQIEKITKDRKKIFLTLDINISPNKKNLDNIKFESPKNSWQ 542
Y L EKK DL DRT+TIRNQIEKITKD+KK FLT +INISPNKK+ + + ESP+ WQ
Sbjct: 1058 YSLIEKKTKDLTDRTSTIRNQIEKITKDKKKEFLTPEINISPNKKSHKSKRLESPQKFWQ 1117
Query: 543 ILKRKSTRFIRQWHYFMQFLIVIEKTYMDTLLCIINITRINVQPFLESKK 692
ILKR++TR IR+ HYF++F IE+ Y+D LLCIINI +IN Q FLES K
Sbjct: 1118 ILKRRNTRLIRKSHYFIKFF--IERIYIDILLCIINIPQINAQLFLESTK 1165
>ref|YP_007474425.1| hypothetical chloroplast RF1 (chloroplast) [Magnolia officinalis]
gi|372862476|gb|AEX98557.1| hypothetical chloroplast RF1
(chloroplast) [Magnolia officinalis]
Length = 1863
Score = 251 bits (641), Expect = 2e-64
Identities = 136/235 (57%), Positives = 166/235 (70%), Gaps = 3/235 (1%)
Frame = +3
Query: 6 PFGSPRKQPSFFEPIXXXXXXXXXXXXXXXXXALRILKERAKWFLKVSKEKTRWIIQTIR 185
PFGSPRK+PSFF+PI LR L ER KWFL+V KEKTRWI++T+
Sbjct: 926 PFGSPRKRPSFFDPIWKELEKKLRKVKKKCFLVLRALGERKKWFLRVLKEKTRWILKTVL 985
Query: 186 FLKRIMKDLAKRNPILLFGLREVYESSQKKNENGKNRIIISNPIIHESSIQLRPMDWTHY 365
F+KRI+K+ AK NPI LFGLR+VYE NEN K+ II SN I HES I++R +DWT+Y
Sbjct: 986 FIKRIIKEFAKVNPIFLFGLRKVYEP----NENRKDSII-SNKINHESIIRIRSVDWTNY 1040
Query: 366 LLTEKKITDLADRTTTIRNQIEKITKDRKKIFLTLDINISPNKKNLDNIKFESPKNSWQI 545
LTEKK+ DLADRTTTIRN+IE+ITKD++KIFLT + ISPN+ D+ + ES K+ WQI
Sbjct: 1041 SLTEKKMKDLADRTTTIRNKIERITKDKRKIFLTPNRKISPNETGCDDKRSESQKHIWQI 1100
Query: 546 LKRKSTRFIRQWHYFMQFLIVIEKTYMDTLLCIINITRINVQPFLE---SKKIIE 701
KR R IR+WHYFM+ IE+ YMD LC INI RIN Q FLE +KKII+
Sbjct: 1101 SKRGGARLIRKWHYFMKSF--IERIYMDIFLCNINIPRINAQLFLEFESTKKIID 1153
>ref|YP_004769771.1| hypothetical chloroplast RF19 [Magnolia kwangsiensis]
gi|302424237|gb|ADL39113.1| hypothetical chloroplast RF19
[Magnolia kwangsiensis]
Length = 1838
Score = 251 bits (641), Expect = 2e-64
Identities = 136/235 (57%), Positives = 166/235 (70%), Gaps = 3/235 (1%)
Frame = +3
Query: 6 PFGSPRKQPSFFEPIXXXXXXXXXXXXXXXXXALRILKERAKWFLKVSKEKTRWIIQTIR 185
PFGSPRK+PSFF+PI LR L ER KWFL+V KEKTRWI++T+
Sbjct: 902 PFGSPRKRPSFFDPIWKELEKKIRKVKKKCFLVLRALGERKKWFLRVLKEKTRWILKTVL 961
Query: 186 FLKRIMKDLAKRNPILLFGLREVYESSQKKNENGKNRIIISNPIIHESSIQLRPMDWTHY 365
F+KRI+K+ AK NPI LFGLR+VYE NEN K+ II SN I HES I++R +DWT+Y
Sbjct: 962 FIKRIIKEFAKVNPIFLFGLRKVYEP----NENRKDSII-SNKINHESIIRIRSVDWTNY 1016
Query: 366 LLTEKKITDLADRTTTIRNQIEKITKDRKKIFLTLDINISPNKKNLDNIKFESPKNSWQI 545
LTEKK+ DLADRTTTIRN+IE+ITKD++KIFLT + ISPN+ D+ + ES K+ WQI
Sbjct: 1017 SLTEKKMKDLADRTTTIRNKIERITKDKRKIFLTPNRKISPNETGCDDKRSESQKHIWQI 1076
Query: 546 LKRKSTRFIRQWHYFMQFLIVIEKTYMDTLLCIINITRINVQPFLE---SKKIIE 701
KR R IR+WHYFM+ IE+ YMD LC INI RIN Q FLE +KKII+
Sbjct: 1077 SKRGGARLIRKWHYFMKSF--IERIYMDIFLCNINIPRINAQLFLEFESTKKIID 1129
>gb|ADD30919.1| putative RF1 protein [Liquidambar styraciflua]
Length = 1882
Score = 251 bits (640), Expect = 2e-64
Identities = 140/234 (59%), Positives = 170/234 (72%), Gaps = 2/234 (0%)
Frame = +3
Query: 6 PFGSPRKQPSFFEPIXXXXXXXXXXXXXXXXXALRILKERAKWFLKVSKEKTRWIIQTIR 185
PFGSPRK+PSFFEPI LR+LKE+ K+FL V+KE W+I+++
Sbjct: 950 PFGSPRKKPSFFEPIFKELGKKIRKLKKNCFGVLRVLKEKTKFFLTVAKEIKEWVIKSVL 1009
Query: 186 FLKRIMKDLAKRNPILLFGLREVYESSQKKNENGKNRIII-SNPIIHESSIQLRPMDWTH 362
F+K I L+KRNPI LFGLREVYESS+ K E K+ II SN IIHESSIQ R MDWT+
Sbjct: 1010 FIKII---LSKRNPIQLFGLREVYESSETKKE--KDLIISNSNRIIHESSIQFRSMDWTN 1064
Query: 363 YLLTEKKITDLADRTTTIRNQIEKITKDRKKIFLTLDINISPNKKNLDNIKFESPKNSWQ 542
Y L EKK DL DRT+TIRNQIEKITKD+KK FLT +INISPNKK+ + ESP+ WQ
Sbjct: 1065 YSLIEKKTKDLTDRTSTIRNQIEKITKDKKKEFLTPEINISPNKKSHKYKRLESPQKFWQ 1124
Query: 543 ILKRKSTRFIRQWHYFMQFLIVIEKTYMDTLLCIINITRINVQPFLES-KKIIE 701
ILKR++TR IR+ HYF++F IE+ Y+D LLCIINI +IN Q FLES KK+I+
Sbjct: 1125 ILKRRNTRLIRKSHYFIKFF--IERIYIDILLCIINIPQINAQLFLESTKKMID 1176
>ref|YP_009026939.1| photosystem I assembly protein Ycf1 [Magnolia tripetala]
gi|608608461|gb|AHW52015.1| photosystem I assembly
protein Ycf1 [Magnolia tripetala]
Length = 1846
Score = 250 bits (638), Expect = 4e-64
Identities = 135/235 (57%), Positives = 166/235 (70%), Gaps = 3/235 (1%)
Frame = +3
Query: 6 PFGSPRKQPSFFEPIXXXXXXXXXXXXXXXXXALRILKERAKWFLKVSKEKTRWIIQTIR 185
PFGSPRK+PSFF+PI LR L ER KWFL+V KEKTRWI++T+
Sbjct: 908 PFGSPRKRPSFFDPIWKELEKKIRKVKKKCFLVLRALGERKKWFLRVLKEKTRWILKTVL 967
Query: 186 FLKRIMKDLAKRNPILLFGLREVYESSQKKNENGKNRIIISNPIIHESSIQLRPMDWTHY 365
F+KRI+K+ AK NPI LFGLR+VYE NEN K+ II SN I HES I++R +DWT+Y
Sbjct: 968 FIKRIIKEFAKVNPIFLFGLRKVYEP----NENRKDSII-SNKINHESIIRIRSVDWTNY 1022
Query: 366 LLTEKKITDLADRTTTIRNQIEKITKDRKKIFLTLDINISPNKKNLDNIKFESPKNSWQI 545
LTEKK+ DLADRTTTIRN+IE+ITKD++KIFLT + ISPN+ D+ + ES K+ WQI
Sbjct: 1023 SLTEKKMKDLADRTTTIRNKIERITKDKRKIFLTPNRKISPNETGCDDKRSESQKHIWQI 1082
Query: 546 LKRKSTRFIRQWHYFMQFLIVIEKTYMDTLLCIINITRINVQPFLE---SKKIIE 701
KR R IR+WHYFM+ IE+ YMD LC INI RIN Q FLE +KK+I+
Sbjct: 1083 SKRGGARLIRKWHYFMKSF--IERIYMDIFLCNINIPRINAQLFLEFESTKKMID 1135
>ref|YP_008993320.1| hypothetical chloroplast RF19 (chloroplast) [Magnolia dealbata]
Length = 1846
Score = 249 bits (636), Expect = 6e-64
Identities = 134/235 (57%), Positives = 166/235 (70%), Gaps = 3/235 (1%)
Frame = +3
Query: 6 PFGSPRKQPSFFEPIXXXXXXXXXXXXXXXXXALRILKERAKWFLKVSKEKTRWIIQTIR 185
PFGSPRK+PSFF+PI LR L+ER KWFL+V KEKTRWI++T+
Sbjct: 908 PFGSPRKRPSFFDPIWKELEKKIRKVKKKCFLVLRALRERTKWFLRVLKEKTRWILKTVL 967
Query: 186 FLKRIMKDLAKRNPILLFGLREVYESSQKKNENGKNRIIISNPIIHESSIQLRPMDWTHY 365
F+KRI+K+ AK NPI LFGLR+VYE NEN K+ II SN I HES I++R +DWT+Y
Sbjct: 968 FIKRIIKEFAKVNPIFLFGLRKVYEP----NENRKDSII-SNKINHESIIRIRSVDWTNY 1022
Query: 366 LLTEKKITDLADRTTTIRNQIEKITKDRKKIFLTLDINISPNKKNLDNIKFESPKNSWQI 545
LTEKK+ DLADRTTTIRN+IE+ITKD++KIFLT + ISPN+ D+ + ES K+ WQI
Sbjct: 1023 SLTEKKMKDLADRTTTIRNKIERITKDKRKIFLTPNRKISPNETGCDDKRSESQKHIWQI 1082
Query: 546 LKRKSTRFIRQWHYFMQFLIVIEKTYMDTLLCIINITRINVQPFLE---SKKIIE 701
KR R IR+WHYFM+ IE+ YMD LC INI RIN Q F E +KK+I+
Sbjct: 1083 SKRGGARLIRKWHYFMKSF--IERIYMDIFLCNINIPRINAQLFPEFESTKKMID 1135
>gb|ADD30912.1| putative RF1 protein [Ximenia americana]
Length = 1895
Score = 249 bits (636), Expect = 6e-64
Identities = 140/229 (61%), Positives = 163/229 (71%)
Frame = +3
Query: 6 PFGSPRKQPSFFEPIXXXXXXXXXXXXXXXXXALRILKERAKWFLKVSKEKTRWIIQTIR 185
PFGSPRK P+FFEPI R+LKER K FLKVSKE +W+I+ I
Sbjct: 950 PFGSPRKGPAFFEPIFKELEKKIRKLKKKHFLVRRVLKERTKLFLKVSKETKKWVIKNI- 1008
Query: 186 FLKRIMKDLAKRNPILLFGLREVYESSQKKNENGKNRIIISNPIIHESSIQLRPMDWTHY 365
LKRI+K+L+K NPILLFGLREVYESS+ K GK+ II SN +IHESSIQ R MDWT Y
Sbjct: 1009 -LKRIIKNLSKVNPILLFGLREVYESSETKK--GKDSII-SNRMIHESSIQNRSMDWTKY 1064
Query: 366 LLTEKKITDLADRTTTIRNQIEKITKDRKKIFLTLDINISPNKKNLDNIKFESPKNSWQI 545
LLTEKK+ DL DRT TIRNQIE ITKD+KK FLT +I ISPNK N + K +SPK WQI
Sbjct: 1065 LLTEKKMKDLTDRTNTIRNQIEIITKDKKKGFLTPEIKISPNKINYNAKKLKSPKKIWQI 1124
Query: 546 LKRKSTRFIRQWHYFMQFLIVIEKTYMDTLLCIINITRINVQPFLESKK 692
L+R++ R IR+ HYF++F IEK Y+D LLCIINI IN Q F ES K
Sbjct: 1125 LERRNARLIRKSHYFIKFW--IEKIYIDILLCIINIPSINAQLFFESTK 1171
>ref|YP_784445.1| hypothetical protein RF1 [Drimys granadensis]
gi|118574748|sp|Q06GT8.1|YCF1_DRIGR RecName:
Full=Putative membrane protein ycf1
gi|112032721|gb|ABH88356.1| hypothetical protein RF1
[Drimys granadensis]
Length = 1857
Score = 249 bits (636), Expect = 6e-64
Identities = 134/229 (58%), Positives = 161/229 (70%)
Frame = +3
Query: 6 PFGSPRKQPSFFEPIXXXXXXXXXXXXXXXXXALRILKERAKWFLKVSKEKTRWIIQTIR 185
PFGSPRK+PSFFEPI L+ LKER KW LKVSKEK RW+I+ +
Sbjct: 903 PFGSPRKEPSFFEPIFKELEKKMRKVQKKYFRVLKFLKERTKWCLKVSKEKIRWVIKIVL 962
Query: 186 FLKRIMKDLAKRNPILLFGLREVYESSQKKNENGKNRIIISNPIIHESSIQLRPMDWTHY 365
F+KRIMK+LAK N ILLFGLR+ Y+ S E GK+ II SN I HES+IQ+RPM WT+Y
Sbjct: 963 FIKRIMKELAKVNSILLFGLRKGYQPS----ETGKDSII-SNKITHESTIQIRPMGWTNY 1017
Query: 366 LLTEKKITDLADRTTTIRNQIEKITKDRKKIFLTLDINISPNKKNLDNIKFESPKNSWQI 545
LTEKK+ DLAD TTTI+NQIE+I KD+KKIFLT DINI PNK + D+ + ES K+ WQ
Sbjct: 1018 SLTEKKMKDLADSTTTIKNQIERIKKDKKKIFLTTDINIIPNKTSFDDERSESQKHIWQR 1077
Query: 546 LKRKSTRFIRQWHYFMQFLIVIEKTYMDTLLCIINITRINVQPFLESKK 692
K++S R IR+ YF+++ IE YMD LC INI RIN Q FLES K
Sbjct: 1078 SKKRSARLIRKSQYFIKYF--IEIIYMDIFLCTINIPRINAQLFLESTK 1124
>ref|YP_008993492.1| hypothetical chloroplast RF19 (chloroplast) [Magnolia kobus]
Length = 1858
Score = 249 bits (635), Expect = 8e-64
Identities = 135/235 (57%), Positives = 165/235 (70%), Gaps = 3/235 (1%)
Frame = +3
Query: 6 PFGSPRKQPSFFEPIXXXXXXXXXXXXXXXXXALRILKERAKWFLKVSKEKTRWIIQTIR 185
PFGSPRK+PSFF+PI LR L +R KWFL+V KEKTRWI++T+
Sbjct: 920 PFGSPRKRPSFFDPIWKELEKKIRKVKKKCFLVLRALVKRKKWFLRVLKEKTRWILKTVL 979
Query: 186 FLKRIMKDLAKRNPILLFGLREVYESSQKKNENGKNRIIISNPIIHESSIQLRPMDWTHY 365
F+KRI+K+ AK NPI LFGLR+VYE NEN K+ II SN I HES I++R +DWT+Y
Sbjct: 980 FIKRIIKEFAKVNPIFLFGLRKVYEP----NENRKDSII-SNKINHESIIRIRSVDWTNY 1034
Query: 366 LLTEKKITDLADRTTTIRNQIEKITKDRKKIFLTLDINISPNKKNLDNIKFESPKNSWQI 545
LTEKK+ DLADRTTTIRN+IE+ITKD +KIFLT + ISPN+ D+ + ES K+ WQI
Sbjct: 1035 SLTEKKMKDLADRTTTIRNKIERITKDNRKIFLTPNRKISPNETGCDDKRSESQKHIWQI 1094
Query: 546 LKRKSTRFIRQWHYFMQFLIVIEKTYMDTLLCIINITRINVQPFLE---SKKIIE 701
KR R IR+WHYFM+ IE+ YMD LC INI RIN Q FLE +KKII+
Sbjct: 1095 SKRGGARLIRKWHYFMKSF--IERIYMDIFLCNINIPRINAQLFLEFESTKKIID 1147
>ref|YP_008993406.1| hypothetical chloroplast RF19 (chloroplast) [Magnolia pyramidata]
Length = 1858
Score = 249 bits (635), Expect = 8e-64
Identities = 134/235 (57%), Positives = 166/235 (70%), Gaps = 3/235 (1%)
Frame = +3
Query: 6 PFGSPRKQPSFFEPIXXXXXXXXXXXXXXXXXALRILKERAKWFLKVSKEKTRWIIQTIR 185
PFGSPRK+PSFF+PI LR L ER KWFL+V KEKTRWI++T+
Sbjct: 920 PFGSPRKRPSFFDPIWKELEKKIRKVKKKCFLVLRALGERKKWFLRVLKEKTRWILKTVL 979
Query: 186 FLKRIMKDLAKRNPILLFGLREVYESSQKKNENGKNRIIISNPIIHESSIQLRPMDWTHY 365
F+KRI+K+ AK NPI LFGLR+VYE NEN K+ II SN I HES I++R +DWT+Y
Sbjct: 980 FIKRIIKEFAKVNPIFLFGLRKVYEP----NENRKDSII-SNKINHESIIRIRSVDWTNY 1034
Query: 366 LLTEKKITDLADRTTTIRNQIEKITKDRKKIFLTLDINISPNKKNLDNIKFESPKNSWQI 545
LTEKK+ DLADRTTTI+N+IE+ITKD++KIFLT + ISPN+ D+ + ES K+ WQI
Sbjct: 1035 SLTEKKMKDLADRTTTIQNKIERITKDKRKIFLTPNRKISPNETGCDDKRSESQKHIWQI 1094
Query: 546 LKRKSTRFIRQWHYFMQFLIVIEKTYMDTLLCIINITRINVQPFLE---SKKIIE 701
KR R IR+WHYFM+ IE+ YMD LC INI RIN Q FLE +KKI++
Sbjct: 1095 SKRGGARLIRKWHYFMKSF--IERIYMDIFLCNINIPRINAQLFLEFESTKKILD 1147