BLASTX nr result
ID: Cocculus22_contig00019875
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus22_contig00019875
(393 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
dbj|BAD34493.1| Gag-Pol [Ipomoea batatas] 207 2e-51
gb|ACL97384.1| Gag-Pol polyprotein [Medicago truncatula] 197 2e-48
gb|ACL97387.1| Gag-Pol polyprotein [Lotus japonicus] 196 4e-48
gb|AFB73912.1| polyprotein [Citrus sinensis] 194 1e-47
gb|AFB73911.1| polyprotein [Citrus sinensis] 194 1e-47
gb|ACL97385.1| Gag-Pol polyprotein [Medicago truncatula] 194 1e-47
gb|ACL97383.1| Gag-Pol polyprotein [Medicago truncatula] 193 2e-47
gb|ACL97386.1| Gag-Pol polyprotein [Medicago truncatula] 192 4e-47
gb|ADG59810.1| gag-pol polyprotein [Fraxinus excelsior] 186 4e-45
gb|ABR16307.1| unknown [Picea sitchensis] 146 3e-33
gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] gi|1337118... 144 1e-32
gb|ACS74199.1| putative gag-pol polyprotein [Fragaria x ananassa] 143 2e-32
ref|XP_006484589.1| PREDICTED: uncharacterized protein LOC102625... 143 3e-32
gb|AAK52561.1|AC079853_14 Putative retroelement pol polyprotein ... 143 3e-32
dbj|BAB11200.1| copia-type polyprotein [Arabidopsis thaliana] gi... 142 4e-32
gb|AAG51247.1|AC055769_6 copia-type polyprotein, putative; 28768... 142 4e-32
gb|AAF25964.2|AC017118_1 F6N18.1 [Arabidopsis thaliana] 142 4e-32
dbj|BAA11674.1| unnamed protein product [Nicotiana tabacum] 140 1e-31
sp|P10978.1|POLX_TOBAC RecName: Full=Retrovirus-related Pol poly... 140 1e-31
gb|ACN78973.1| copia-type polyprotein [Glycine max] gi|225016157... 140 1e-31
>dbj|BAD34493.1| Gag-Pol [Ipomoea batatas]
Length = 1298
Score = 207 bits (526), Expect = 2e-51
Identities = 97/131 (74%), Positives = 112/131 (85%)
Frame = -1
Query: 393 FVSFIDDYSRRCWVYPIKSKADVFTIFKTFKARVELESGKRIKCLRTDNGGEYTSNEFDA 214
FVSFIDDYSRRCWVYPIK K+DVF FK FKARVEL+SGK+IKC RTDNGGEYTS EFD
Sbjct: 493 FVSFIDDYSRRCWVYPIKKKSDVFATFKAFKARVELDSGKKIKCFRTDNGGEYTSEEFDD 552
Query: 213 FCRQEGINRQFTVAYTPQQNGVAERMNRTLLDKTRVVLGTAGLDKPF*AEAVRAACYVTN 34
FC++EGI RQFTVAYTPQQNGVAERMNRTLL++TR +L AGL+K F AEAV ACY+ N
Sbjct: 553 FCKKEGIKRQFTVAYTPQQNGVAERMNRTLLERTRAMLRAAGLEKSFWAEAVNTACYLVN 612
Query: 33 QVSSSEIKMET 1
+ S+ I+++T
Sbjct: 613 RAPSTAIELKT 623
>gb|ACL97384.1| Gag-Pol polyprotein [Medicago truncatula]
Length = 1305
Score = 197 bits (500), Expect = 2e-48
Identities = 94/131 (71%), Positives = 111/131 (84%)
Frame = -1
Query: 393 FVSFIDDYSRRCWVYPIKSKADVFTIFKTFKARVELESGKRIKCLRTDNGGEYTSNEFDA 214
FVSFIDDYSRR WVYPIK K+DVF +FK FKA++ELE+GK+IKCLRTDNGGEY EF A
Sbjct: 503 FVSFIDDYSRRLWVYPIKKKSDVFPVFKAFKAQIELETGKKIKCLRTDNGGEYVDGEFLA 562
Query: 213 FCRQEGINRQFTVAYTPQQNGVAERMNRTLLDKTRVVLGTAGLDKPF*AEAVRAACYVTN 34
FC+QEGI RQFTVA+TPQQNGVAERMNRTLL++TR +L TAG+ K F AEAV+ ACYV N
Sbjct: 563 FCKQEGIVRQFTVAHTPQQNGVAERMNRTLLERTRAMLKTAGMAKSFWAEAVKTACYVIN 622
Query: 33 QVSSSEIKMET 1
+ S+ I ++T
Sbjct: 623 RSPSTAIDLKT 633
>gb|ACL97387.1| Gag-Pol polyprotein [Lotus japonicus]
Length = 1305
Score = 196 bits (497), Expect = 4e-48
Identities = 94/131 (71%), Positives = 111/131 (84%)
Frame = -1
Query: 393 FVSFIDDYSRRCWVYPIKSKADVFTIFKTFKARVELESGKRIKCLRTDNGGEYTSNEFDA 214
FVSFIDDYSRR WVYPIK K+ V+++FK FKA+VELE+GKRIKCLRTDNGGEYT +F A
Sbjct: 503 FVSFIDDYSRRLWVYPIKKKSGVYSVFKEFKAQVELETGKRIKCLRTDNGGEYTDGDFLA 562
Query: 213 FCRQEGINRQFTVAYTPQQNGVAERMNRTLLDKTRVVLGTAGLDKPF*AEAVRAACYVTN 34
FC+QEGI RQFTVA+TPQQNGVAERMNRTLL++TR +L TAGL K F AEA + ACYV N
Sbjct: 563 FCKQEGITRQFTVAHTPQQNGVAERMNRTLLERTRAMLKTAGLAKSFWAEAAKTACYVIN 622
Query: 33 QVSSSEIKMET 1
+ S+ I ++T
Sbjct: 623 RSPSTAIGLKT 633
>gb|AFB73912.1| polyprotein [Citrus sinensis]
Length = 1309
Score = 194 bits (493), Expect = 1e-47
Identities = 92/130 (70%), Positives = 108/130 (83%)
Frame = -1
Query: 390 VSFIDDYSRRCWVYPIKSKADVFTIFKTFKARVELESGKRIKCLRTDNGGEYTSNEFDAF 211
V+FIDDYSRRCWVYPIK K+DVF +FK +KA VELESGK+IKCLRTDNGGEYT +EF AF
Sbjct: 504 VTFIDDYSRRCWVYPIKKKSDVFPVFKEYKAWVELESGKKIKCLRTDNGGEYTDSEFLAF 563
Query: 210 CRQEGINRQFTVAYTPQQNGVAERMNRTLLDKTRVVLGTAGLDKPF*AEAVRAACYVTNQ 31
C+QEGI RQFTVAYTPQQNGVAERMNRTL ++ R +L TAGL F AEA + ACY+ N+
Sbjct: 564 CKQEGIQRQFTVAYTPQQNGVAERMNRTLTERIRAMLRTAGLPNSFWAEAAKTACYIVNR 623
Query: 30 VSSSEIKMET 1
S+ I ++T
Sbjct: 624 SPSTAIGLKT 633
>gb|AFB73911.1| polyprotein [Citrus sinensis]
Length = 1309
Score = 194 bits (492), Expect = 1e-47
Identities = 92/130 (70%), Positives = 107/130 (82%)
Frame = -1
Query: 390 VSFIDDYSRRCWVYPIKSKADVFTIFKTFKARVELESGKRIKCLRTDNGGEYTSNEFDAF 211
V+FIDDYSRRCWVYPIK K+DVF +FK +KA VELESGK+IKCLRTDNGGEYT EF AF
Sbjct: 504 VTFIDDYSRRCWVYPIKKKSDVFPVFKEYKAWVELESGKKIKCLRTDNGGEYTDGEFLAF 563
Query: 210 CRQEGINRQFTVAYTPQQNGVAERMNRTLLDKTRVVLGTAGLDKPF*AEAVRAACYVTNQ 31
C+QEGI RQFTVAYTPQQNGVAERMNRTL ++ R +L TAGL F AEA + ACY+ N+
Sbjct: 564 CKQEGIQRQFTVAYTPQQNGVAERMNRTLTERIRAMLRTAGLPNSFWAEAAKTACYIVNR 623
Query: 30 VSSSEIKMET 1
S+ I ++T
Sbjct: 624 SPSTAIGLKT 633
>gb|ACL97385.1| Gag-Pol polyprotein [Medicago truncatula]
Length = 1305
Score = 194 bits (492), Expect = 1e-47
Identities = 93/131 (70%), Positives = 110/131 (83%)
Frame = -1
Query: 393 FVSFIDDYSRRCWVYPIKSKADVFTIFKTFKARVELESGKRIKCLRTDNGGEYTSNEFDA 214
FVSFIDDYSRR WVYPIK K+DVF +FK FKA++ELE+GK+IKCLRTDNGGEY EF A
Sbjct: 503 FVSFIDDYSRRLWVYPIKKKSDVFPVFKAFKAQIELETGKKIKCLRTDNGGEYVDGEFLA 562
Query: 213 FCRQEGINRQFTVAYTPQQNGVAERMNRTLLDKTRVVLGTAGLDKPF*AEAVRAACYVTN 34
FC+QEGI RQFTVA+TPQQNGVAERMNRTLL++TR +L TA + K F AEAV+ ACYV N
Sbjct: 563 FCKQEGIVRQFTVAHTPQQNGVAERMNRTLLERTRAMLKTAEMAKSFWAEAVKTACYVIN 622
Query: 33 QVSSSEIKMET 1
+ S+ I ++T
Sbjct: 623 RSPSTTIDLKT 633
>gb|ACL97383.1| Gag-Pol polyprotein [Medicago truncatula]
Length = 1305
Score = 193 bits (491), Expect = 2e-47
Identities = 93/131 (70%), Positives = 110/131 (83%)
Frame = -1
Query: 393 FVSFIDDYSRRCWVYPIKSKADVFTIFKTFKARVELESGKRIKCLRTDNGGEYTSNEFDA 214
FVSFIDDYSRR WVYPIK K+DVF +FK FKA++ELE+ K+IKCLRTDNGGEY EF A
Sbjct: 503 FVSFIDDYSRRLWVYPIKKKSDVFPVFKAFKAQIELETRKKIKCLRTDNGGEYIDGEFLA 562
Query: 213 FCRQEGINRQFTVAYTPQQNGVAERMNRTLLDKTRVVLGTAGLDKPF*AEAVRAACYVTN 34
FC+QEGI RQFTVA+TPQQNGVAERMNRTLL++TR +L TAG+ K F AEAV+ ACYV N
Sbjct: 563 FCKQEGIVRQFTVAHTPQQNGVAERMNRTLLERTRAMLKTAGMAKSFWAEAVKTACYVIN 622
Query: 33 QVSSSEIKMET 1
+ S+ I ++T
Sbjct: 623 RSPSTAIDLKT 633
>gb|ACL97386.1| Gag-Pol polyprotein [Medicago truncatula]
Length = 1305
Score = 192 bits (488), Expect = 4e-47
Identities = 92/131 (70%), Positives = 109/131 (83%)
Frame = -1
Query: 393 FVSFIDDYSRRCWVYPIKSKADVFTIFKTFKARVELESGKRIKCLRTDNGGEYTSNEFDA 214
FVSFIDDYSRR WVYPIK K+DVF +FK FKA++ELE+ K+IKCLRTDNGGEY EF A
Sbjct: 503 FVSFIDDYSRRLWVYPIKKKSDVFPVFKAFKAQIELETEKKIKCLRTDNGGEYVDGEFLA 562
Query: 213 FCRQEGINRQFTVAYTPQQNGVAERMNRTLLDKTRVVLGTAGLDKPF*AEAVRAACYVTN 34
FC+QEGI RQFTVA+TPQQNGVAERMNRTLL++TR +L TAG+ K F AEA + ACYV N
Sbjct: 563 FCKQEGIVRQFTVAHTPQQNGVAERMNRTLLERTRAMLKTAGMAKSFWAEAAKTACYVIN 622
Query: 33 QVSSSEIKMET 1
+ S+ I ++T
Sbjct: 623 RSPSTAIDLKT 633
>gb|ADG59810.1| gag-pol polyprotein [Fraxinus excelsior]
Length = 188
Score = 186 bits (471), Expect = 4e-45
Identities = 90/128 (70%), Positives = 102/128 (79%)
Frame = -1
Query: 384 FIDDYSRRCWVYPIKSKADVFTIFKTFKARVELESGKRIKCLRTDNGGEYTSNEFDAFCR 205
FIDDYSRRCWVYPIK AD F +FK FK VE ES K+IKCLRTDN GEYT EFD+FC+
Sbjct: 1 FIDDYSRRCWVYPIKRMADGFPVFKIFKVWVEFESEKKIKCLRTDNEGEYTGVEFDSFCQ 60
Query: 204 QEGINRQFTVAYTPQQNGVAERMNRTLLDKTRVVLGTAGLDKPF*AEAVRAACYVTNQVS 25
QEGI RQ TVAYTPQQNGVAERMNRTLL++TR +L T G+ K F AEAV+ ACYV NQ
Sbjct: 61 QEGIKRQLTVAYTPQQNGVAERMNRTLLERTRAMLRTTGMTKSFWAEAVKTACYVINQSP 120
Query: 24 SSEIKMET 1
S+ I ++T
Sbjct: 121 STAIDLKT 128
>gb|ABR16307.1| unknown [Picea sitchensis]
Length = 407
Score = 146 bits (369), Expect = 3e-33
Identities = 71/130 (54%), Positives = 91/130 (70%)
Frame = -1
Query: 390 VSFIDDYSRRCWVYPIKSKADVFTIFKTFKARVELESGKRIKCLRTDNGGEYTSNEFDAF 211
++FIDDYSRR WVY +K+K +VF FK FKA VE +SGK IK LRTDNG EY + EFD +
Sbjct: 157 LTFIDDYSRRIWVYFLKNKDEVFEKFKEFKAFVEKQSGKSIKILRTDNGKEYVNKEFDHY 216
Query: 210 CRQEGINRQFTVAYTPQQNGVAERMNRTLLDKTRVVLGTAGLDKPF*AEAVRAACYVTNQ 31
C+ GI R+ TV YTPQQNGVAER NRTL++ R +L +D F AEA+ A Y+ N+
Sbjct: 217 CKYNGIKREHTVPYTPQQNGVAERKNRTLMEMARCMLHARNMDPKFWAEAINTATYIVNR 276
Query: 30 VSSSEIKMET 1
+ +K +T
Sbjct: 277 TPTIAVKHKT 286
>gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] gi|133711819|gb|ABO36636.1|
copia LTR rider [Solanum lycopersicum]
Length = 1307
Score = 144 bits (363), Expect = 1e-32
Identities = 73/131 (55%), Positives = 94/131 (71%)
Frame = -1
Query: 393 FVSFIDDYSRRCWVYPIKSKADVFTIFKTFKARVELESGKRIKCLRTDNGGEYTSNEFDA 214
FVS IDDYSR WVY +K K++ F FK +K +E ++GK+IK LRTDNG E+ +EFD
Sbjct: 492 FVSIIDDYSRMTWVYMMKHKSEAFQKFKEWKILMENQTGKKIKRLRTDNGLEFCWSEFDQ 551
Query: 213 FCRQEGINRQFTVAYTPQQNGVAERMNRTLLDKTRVVLGTAGLDKPF*AEAVRAACYVTN 34
FC+ EGI R TV TPQQNGVAERMN+TLL++ R +L AGLD+ F AEAV ACY+ N
Sbjct: 552 FCKDEGIARHRTVRNTPQQNGVAERMNQTLLERARCMLSNAGLDRRFWAEAVSTACYLIN 611
Query: 33 QVSSSEIKMET 1
+ + I+ +T
Sbjct: 612 RGPHTGIQCKT 622
>gb|ACS74199.1| putative gag-pol polyprotein [Fragaria x ananassa]
Length = 1297
Score = 143 bits (361), Expect = 2e-32
Identities = 70/130 (53%), Positives = 93/130 (71%)
Frame = -1
Query: 393 FVSFIDDYSRRCWVYPIKSKADVFTIFKTFKARVELESGKRIKCLRTDNGGEYTSNEFDA 214
FVSFIDD+SR+ W++ +K+K +VFT FK +KA V ++G++IKCLR+DNGGEY +F
Sbjct: 475 FVSFIDDFSRKVWIFFMKTKNEVFTKFKEWKAEVGNQTGRKIKCLRSDNGGEYRDKKFLQ 534
Query: 213 FCRQEGINRQFTVAYTPQQNGVAERMNRTLLDKTRVVLGTAGLDKPF*AEAVRAACYVTN 34
C+ EGI R FTV +PQQNGVAERMNRTL++K R + AGL + F AEA ACY+ N
Sbjct: 535 LCKDEGITRHFTVKKSPQQNGVAERMNRTLMEKERSMRFHAGLPEEFWAEAANHACYLIN 594
Query: 33 QVSSSEIKME 4
+ S I +
Sbjct: 595 RSPSRAINFK 604
>ref|XP_006484589.1| PREDICTED: uncharacterized protein LOC102625372 [Citrus sinensis]
Length = 1258
Score = 143 bits (360), Expect = 3e-32
Identities = 73/118 (61%), Positives = 87/118 (73%)
Frame = -1
Query: 354 VYPIKSKADVFTIFKTFKARVELESGKRIKCLRTDNGGEYTSNEFDAFCRQEGINRQFTV 175
VY A +FK +KA VELES K+IK LRTDNGGEYT +EF AFC+QEGI RQFTV
Sbjct: 520 VYMGDDHALEIAVFKEYKAWVELESSKKIKFLRTDNGGEYTDDEFFAFCKQEGIQRQFTV 579
Query: 174 AYTPQQNGVAERMNRTLLDKTRVVLGTAGLDKPF*AEAVRAACYVTNQVSSSEIKMET 1
AYTPQQNGVAERMNRTL ++ R +L TAGL F AEA + ACY+ N+ S+ I ++T
Sbjct: 580 AYTPQQNGVAERMNRTLTERIRAMLRTAGLPNLFWAEAAKTACYIVNRSPSTAIGLKT 637
Score = 118 bits (296), Expect = 7e-25
Identities = 60/88 (68%), Positives = 68/88 (77%)
Frame = -1
Query: 354 VYPIKSKADVFTIFKTFKARVELESGKRIKCLRTDNGGEYTSNEFDAFCRQEGINRQFTV 175
VY A +FK +KA VELES K+IK LRTDNGGEYT +EF AFC+QEGI RQFTV
Sbjct: 183 VYMGDDHALEIAVFKEYKAWVELESSKKIKFLRTDNGGEYTDDEFFAFCKQEGIQRQFTV 242
Query: 174 AYTPQQNGVAERMNRTLLDKTRVVLGTA 91
AYTPQQNGVAERMNRTL ++ R +L TA
Sbjct: 243 AYTPQQNGVAERMNRTLTERIRAMLRTA 270
>gb|AAK52561.1|AC079853_14 Putative retroelement pol polyprotein [Oryza sativa Japonica Group]
gi|108708632|gb|ABF96427.1| retrotransposon protein,
putative, Ty1-copia subclass [Oryza sativa Japonica
Group]
Length = 1326
Score = 143 bits (360), Expect = 3e-32
Identities = 67/130 (51%), Positives = 90/130 (69%)
Frame = -1
Query: 390 VSFIDDYSRRCWVYPIKSKADVFTIFKTFKARVELESGKRIKCLRTDNGGEYTSNEFDAF 211
++ IDDYSR+ W Y +K K D F FK +K R+E ++ K +K LRTDNGGE+ S+ FD +
Sbjct: 508 LTIIDDYSRKVWPYFLKHKDDTFAAFKEWKVRIERQTEKEVKVLRTDNGGEFCSDAFDDY 567
Query: 210 CRQEGINRQFTVAYTPQQNGVAERMNRTLLDKTRVVLGTAGLDKPF*AEAVRAACYVTNQ 31
CR+EGI R T+ YTPQQNGVAERMNRT++ K R +L A ++K F AEA ACY+ N+
Sbjct: 568 CRKEGIVRHHTIPYTPQQNGVAERMNRTIISKARCMLSNARMNKRFWAEAANTACYLINR 627
Query: 30 VSSSEIKMET 1
S + +T
Sbjct: 628 SPSIPLNKKT 637
>dbj|BAB11200.1| copia-type polyprotein [Arabidopsis thaliana]
gi|13872710|emb|CAC37622.1| polyprotein [Arabidopsis
thaliana]
Length = 1334
Score = 142 bits (359), Expect = 4e-32
Identities = 65/126 (51%), Positives = 89/126 (70%)
Frame = -1
Query: 390 VSFIDDYSRRCWVYPIKSKADVFTIFKTFKARVELESGKRIKCLRTDNGGEYTSNEFDAF 211
++FIDD+SR+CW Y + K++ F FK FKA VE ESGK++ CLR+D GGEY S EFD +
Sbjct: 519 LNFIDDFSRKCWTYLLSEKSETFQFFKEFKAEVERESGKKLVCLRSDRGGEYNSREFDEY 578
Query: 210 CRQEGINRQFTVAYTPQQNGVAERMNRTLLDKTRVVLGTAGLDKPF*AEAVRAACYVTNQ 31
C++ GI RQ T AYTPQQNGVAER NR++++ TR +L + + F EAV+ A Y+ N+
Sbjct: 579 CKEFGIKRQLTAAYTPQQNGVAERKNRSVMNMTRCMLMEMSVPRKFWPEAVQYAVYILNR 638
Query: 30 VSSSEI 13
S +
Sbjct: 639 SPSKAL 644
>gb|AAG51247.1|AC055769_6 copia-type polyprotein, putative; 28768-32772 [Arabidopsis
thaliana]
Length = 1334
Score = 142 bits (359), Expect = 4e-32
Identities = 65/126 (51%), Positives = 89/126 (70%)
Frame = -1
Query: 390 VSFIDDYSRRCWVYPIKSKADVFTIFKTFKARVELESGKRIKCLRTDNGGEYTSNEFDAF 211
++FIDD+SR+CW Y + K++ F FK FKA VE ESGK++ CLR+D GGEY S EFD +
Sbjct: 519 LNFIDDFSRKCWTYLLSEKSETFQFFKEFKAEVERESGKKLVCLRSDRGGEYNSREFDEY 578
Query: 210 CRQEGINRQFTVAYTPQQNGVAERMNRTLLDKTRVVLGTAGLDKPF*AEAVRAACYVTNQ 31
C++ GI RQ T AYTPQQNGVAER NR++++ TR +L + + F EAV+ A Y+ N+
Sbjct: 579 CKEFGIKRQLTAAYTPQQNGVAERKNRSVMNMTRCMLMEMSVPRKFWPEAVQYAVYILNR 638
Query: 30 VSSSEI 13
S +
Sbjct: 639 SPSKAL 644
>gb|AAF25964.2|AC017118_1 F6N18.1 [Arabidopsis thaliana]
Length = 1207
Score = 142 bits (359), Expect = 4e-32
Identities = 65/126 (51%), Positives = 89/126 (70%)
Frame = -1
Query: 390 VSFIDDYSRRCWVYPIKSKADVFTIFKTFKARVELESGKRIKCLRTDNGGEYTSNEFDAF 211
++FIDD+SR+CW Y + K++ F FK FKA VE ESGK++ CLR+D GGEY S EFD +
Sbjct: 424 LNFIDDFSRKCWTYLLSEKSETFQFFKEFKAEVERESGKKLVCLRSDRGGEYNSREFDEY 483
Query: 210 CRQEGINRQFTVAYTPQQNGVAERMNRTLLDKTRVVLGTAGLDKPF*AEAVRAACYVTNQ 31
C++ GI RQ T AYTPQQNGVAER NR++++ TR +L + + F EAV+ A Y+ N+
Sbjct: 484 CKEFGIKRQLTAAYTPQQNGVAERKNRSVMNMTRCMLMEMSVPRKFWPEAVQYAVYILNR 543
Query: 30 VSSSEI 13
S +
Sbjct: 544 SPSKAL 549
>dbj|BAA11674.1| unnamed protein product [Nicotiana tabacum]
Length = 1338
Score = 140 bits (354), Expect = 1e-31
Identities = 67/120 (55%), Positives = 88/120 (73%)
Frame = -1
Query: 393 FVSFIDDYSRRCWVYPIKSKADVFTIFKTFKARVELESGKRIKCLRTDNGGEYTSNEFDA 214
FV+FIDD+SR+ WVY +K+K VF +FK F VE E+GK++KC+RTDNGGEY +FDA
Sbjct: 501 FVTFIDDHSRKTWVYTLKTKDQVFQVFKQFLTLVERETGKKLKCIRTDNGGEY-QGQFDA 559
Query: 213 FCRQEGINRQFTVAYTPQQNGVAERMNRTLLDKTRVVLGTAGLDKPF*AEAVRAACYVTN 34
+C++ GI QFT TPQ NG+AERMNRTL+++TR +L + L K F EA+ A YV N
Sbjct: 560 YCKEHGIRHQFTPPKTPQLNGLAERMNRTLIERTRCLLSHSKLPKAFWGEALVTAAYVLN 619
>sp|P10978.1|POLX_TOBAC RecName: Full=Retrovirus-related Pol polyprotein from transposon
TNT 1-94; Includes: RecName: Full=Protease; Includes:
RecName: Full=Reverse transcriptase; Includes: RecName:
Full=Endonuclease gi|20045|emb|CAA32025.1| unnamed
protein product [Nicotiana tabacum]
Length = 1328
Score = 140 bits (354), Expect = 1e-31
Identities = 69/130 (53%), Positives = 91/130 (70%)
Frame = -1
Query: 393 FVSFIDDYSRRCWVYPIKSKADVFTIFKTFKARVELESGKRIKCLRTDNGGEYTSNEFDA 214
FV+FIDD SR+ WVY +K+K VF +F+ F A VE E+G+++K LR+DNGGEYTS EF+
Sbjct: 503 FVTFIDDASRKLWVYILKTKDQVFQVFQKFHALVERETGRKLKRLRSDNGGEYTSREFEE 562
Query: 213 FCRQEGINRQFTVAYTPQQNGVAERMNRTLLDKTRVVLGTAGLDKPF*AEAVRAACYVTN 34
+C GI + TV TPQ NGVAERMNRT+++K R +L A L K F EAV+ ACY+ N
Sbjct: 563 YCSSHGIRHEKTVPGTPQHNGVAERMNRTIVEKVRSMLRMAKLPKSFWGEAVQTACYLIN 622
Query: 33 QVSSSEIKME 4
+ S + E
Sbjct: 623 RSPSVPLAFE 632
>gb|ACN78973.1| copia-type polyprotein [Glycine max] gi|225016157|gb|ACN78980.1|
copia-type polyprotein [Glycine max]
Length = 1042
Score = 140 bits (354), Expect = 1e-31
Identities = 70/131 (53%), Positives = 90/131 (68%)
Frame = -1
Query: 393 FVSFIDDYSRRCWVYPIKSKADVFTIFKTFKARVELESGKRIKCLRTDNGGEYTSNEFDA 214
F+ FIDDYSR+ WVY +K K++ F FK FKA VE ESG IK LR+D GGE+TS EF+
Sbjct: 240 FLLFIDDYSRKTWVYFLKQKSEAFVAFKNFKALVEKESGYVIKALRSDRGGEFTSKEFNE 299
Query: 213 FCRQEGINRQFTVAYTPQQNGVAERMNRTLLDKTRVVLGTAGLDKPF*AEAVRAACYVTN 34
FC + GI R TV +PQQNGVAER NRT+L+ TR +L + K F AEAV A Y++N
Sbjct: 300 FCEKYGIRRPLTVPRSPQQNGVAERKNRTILNMTRCMLKAKNMPKEFWAEAVACAVYLSN 359
Query: 33 QVSSSEIKMET 1
+ + +K +T
Sbjct: 360 RSPTKNVKDQT 370