BLASTX nr result
ID: Cocculus22_contig00019760
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus22_contig00019760
(598 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAN60111.1| hypothetical protein VITISV_023619 [Vitis vinifera] 92 1e-16
gb|EXB77882.1| DNA-directed RNA polymerase III subunit RPC5 [Mor... 91 2e-16
ref|XP_002268044.2| PREDICTED: DNA-directed RNA polymerase III s... 90 4e-16
emb|CBI17549.3| unnamed protein product [Vitis vinifera] 90 4e-16
ref|XP_002310208.2| hypothetical protein POPTR_0007s12540g [Popu... 90 5e-16
ref|XP_007046993.1| Transcription regulators,zinc ion binding, p... 89 7e-16
ref|XP_007046992.1| Transcription regulators,zinc ion binding, p... 89 7e-16
ref|XP_007046991.1| SIN-like family protein, putative isoform 1 ... 89 7e-16
ref|XP_006425717.1| hypothetical protein CICLE_v10025048mg [Citr... 89 9e-16
ref|XP_006425716.1| hypothetical protein CICLE_v10025048mg [Citr... 89 9e-16
ref|XP_002525112.1| DNA-directed RNA polymerase, putative [Ricin... 87 3e-15
ref|NP_199764.1| SIN-like protein [Arabidopsis thaliana] gi|1017... 86 6e-15
ref|XP_006279575.1| hypothetical protein CARUB_v10025904mg [Caps... 86 1e-14
ref|XP_006391982.1| hypothetical protein EUTSA_v10023969mg, part... 85 2e-14
ref|XP_007201935.1| hypothetical protein PRUPE_ppa002228mg [Prun... 85 2e-14
ref|XP_006590438.1| PREDICTED: DNA-directed RNA polymerase III s... 84 2e-14
gb|AEI98616.1| hypothetical protein 111O18.3 [Coffea canephora] 84 2e-14
ref|XP_006395054.1| hypothetical protein EUTSA_v10003751mg [Eutr... 83 5e-14
ref|XP_004300617.1| PREDICTED: DNA-directed RNA polymerase III s... 83 7e-14
ref|XP_004292429.1| PREDICTED: uncharacterized protein LOC101304... 82 9e-14
>emb|CAN60111.1| hypothetical protein VITISV_023619 [Vitis vinifera]
Length = 282
Score = 91.7 bits (226), Expect = 1e-16
Identities = 41/62 (66%), Positives = 50/62 (80%), Gaps = 1/62 (1%)
Frame = -3
Query: 194 FLSPPTDSKSQLYILQYPLRPRWRPYELDERCREVRFKPKSSQLEVDLSLDVDN-NYDTS 18
F PPTD +++Y+LQYPLRP WRPYEL ERC EVR KP S+++EVDLS+DVD+ NYD
Sbjct: 110 FTPPPTDDNTKIYVLQYPLRPYWRPYELGERCDEVRVKPASAEVEVDLSIDVDSKNYDPD 169
Query: 17 VP 12
VP
Sbjct: 170 VP 171
>gb|EXB77882.1| DNA-directed RNA polymerase III subunit RPC5 [Morus notabilis]
Length = 732
Score = 91.3 bits (225), Expect = 2e-16
Identities = 42/65 (64%), Positives = 51/65 (78%), Gaps = 1/65 (1%)
Frame = -3
Query: 194 FLSPPTDSKSQLYILQYPLRPRWRPYELDERCREVRFKPKSSQLEVDLSLDVDN-NYDTS 18
F +P D +QLY+LQYPLRP WRPYELDERC EVR KP SS++E+DLSLDVD+ NYD
Sbjct: 117 FFNPKIDEGTQLYVLQYPLRPSWRPYELDERCEEVRVKPASSEVEMDLSLDVDSKNYDPD 176
Query: 17 VPEKL 3
++L
Sbjct: 177 CGDRL 181
>ref|XP_002268044.2| PREDICTED: DNA-directed RNA polymerase III subunit RPC5 [Vitis
vinifera]
Length = 672
Score = 90.1 bits (222), Expect = 4e-16
Identities = 40/62 (64%), Positives = 49/62 (79%), Gaps = 1/62 (1%)
Frame = -3
Query: 194 FLSPPTDSKSQLYILQYPLRPRWRPYELDERCREVRFKPKSSQLEVDLSLDVDN-NYDTS 18
F PPTD +++Y+LQYPLRP WRPYEL ERC EVR KP S+++EVDLS+DVD+ NYD
Sbjct: 110 FTPPPTDDNTKIYVLQYPLRPYWRPYELGERCDEVRVKPASAEVEVDLSIDVDSKNYDPD 169
Query: 17 VP 12
P
Sbjct: 170 AP 171
>emb|CBI17549.3| unnamed protein product [Vitis vinifera]
Length = 688
Score = 90.1 bits (222), Expect = 4e-16
Identities = 40/62 (64%), Positives = 49/62 (79%), Gaps = 1/62 (1%)
Frame = -3
Query: 194 FLSPPTDSKSQLYILQYPLRPRWRPYELDERCREVRFKPKSSQLEVDLSLDVDN-NYDTS 18
F PPTD +++Y+LQYPLRP WRPYEL ERC EVR KP S+++EVDLS+DVD+ NYD
Sbjct: 110 FTPPPTDDNTKIYVLQYPLRPYWRPYELGERCDEVRVKPASAEVEVDLSIDVDSKNYDPD 169
Query: 17 VP 12
P
Sbjct: 170 AP 171
>ref|XP_002310208.2| hypothetical protein POPTR_0007s12540g [Populus trichocarpa]
gi|550334731|gb|EEE90658.2| hypothetical protein
POPTR_0007s12540g [Populus trichocarpa]
Length = 667
Score = 89.7 bits (221), Expect = 5e-16
Identities = 37/64 (57%), Positives = 50/64 (78%)
Frame = -3
Query: 194 FLSPPTDSKSQLYILQYPLRPRWRPYELDERCREVRFKPKSSQLEVDLSLDVDNNYDTSV 15
+ +P D +QLY++QYPLRP WRPYELDERC+EVR KP+S+++EVDLS+D NYD +
Sbjct: 118 YYTPSVDPNTQLYVMQYPLRPCWRPYELDERCKEVRVKPESTEVEVDLSIDDTKNYDPDI 177
Query: 14 PEKL 3
+L
Sbjct: 178 ASRL 181
>ref|XP_007046993.1| Transcription regulators,zinc ion binding, putative isoform 3
[Theobroma cacao] gi|508699254|gb|EOX91150.1|
Transcription regulators,zinc ion binding, putative
isoform 3 [Theobroma cacao]
Length = 736
Score = 89.4 bits (220), Expect = 7e-16
Identities = 40/65 (61%), Positives = 51/65 (78%), Gaps = 1/65 (1%)
Frame = -3
Query: 194 FLSPPTDSKSQLYILQYPLRPRWRPYELDERCREVRFKPKSSQLEVDLSLDVD-NNYDTS 18
F +P D+ +QLY+LQYPLRP WRPYELDERC EVR KP S ++E+DL++DVD NNYD+
Sbjct: 128 FFTPSIDANTQLYVLQYPLRPCWRPYELDERCEEVRVKPASGEVEMDLAVDVDSNNYDSE 187
Query: 17 VPEKL 3
+L
Sbjct: 188 RASRL 192
>ref|XP_007046992.1| Transcription regulators,zinc ion binding, putative isoform 2
[Theobroma cacao] gi|508699253|gb|EOX91149.1|
Transcription regulators,zinc ion binding, putative
isoform 2 [Theobroma cacao]
Length = 588
Score = 89.4 bits (220), Expect = 7e-16
Identities = 40/65 (61%), Positives = 51/65 (78%), Gaps = 1/65 (1%)
Frame = -3
Query: 194 FLSPPTDSKSQLYILQYPLRPRWRPYELDERCREVRFKPKSSQLEVDLSLDVD-NNYDTS 18
F +P D+ +QLY+LQYPLRP WRPYELDERC EVR KP S ++E+DL++DVD NNYD+
Sbjct: 31 FFTPSIDANTQLYVLQYPLRPCWRPYELDERCEEVRVKPASGEVEMDLAVDVDSNNYDSE 90
Query: 17 VPEKL 3
+L
Sbjct: 91 RASRL 95
>ref|XP_007046991.1| SIN-like family protein, putative isoform 1 [Theobroma cacao]
gi|508699252|gb|EOX91148.1| SIN-like family protein,
putative isoform 1 [Theobroma cacao]
Length = 700
Score = 89.4 bits (220), Expect = 7e-16
Identities = 40/65 (61%), Positives = 51/65 (78%), Gaps = 1/65 (1%)
Frame = -3
Query: 194 FLSPPTDSKSQLYILQYPLRPRWRPYELDERCREVRFKPKSSQLEVDLSLDVD-NNYDTS 18
F +P D+ +QLY+LQYPLRP WRPYELDERC EVR KP S ++E+DL++DVD NNYD+
Sbjct: 128 FFTPSIDANTQLYVLQYPLRPCWRPYELDERCEEVRVKPASGEVEMDLAVDVDSNNYDSE 187
Query: 17 VPEKL 3
+L
Sbjct: 188 RASRL 192
>ref|XP_006425717.1| hypothetical protein CICLE_v10025048mg [Citrus clementina]
gi|568824759|ref|XP_006466762.1| PREDICTED: DNA-directed
RNA polymerase III subunit RPC5-like [Citrus sinensis]
gi|557527707|gb|ESR38957.1| hypothetical protein
CICLE_v10025048mg [Citrus clementina]
Length = 690
Score = 89.0 bits (219), Expect = 9e-16
Identities = 39/65 (60%), Positives = 52/65 (80%), Gaps = 1/65 (1%)
Frame = -3
Query: 194 FLSPPTDSKSQLYILQYPLRPRWRPYELDERCREVRFKPKSSQLEVDLSLDVD-NNYDTS 18
F +P D+ S+LY++QYPLRP WRPYELDERC EVR KP +S++E+DLS+DVD NN+D+
Sbjct: 120 FFTPSIDADSKLYVMQYPLRPLWRPYELDERCEEVRVKPSTSEVEMDLSIDVDSNNWDSE 179
Query: 17 VPEKL 3
+L
Sbjct: 180 KASRL 184
>ref|XP_006425716.1| hypothetical protein CICLE_v10025048mg [Citrus clementina]
gi|557527706|gb|ESR38956.1| hypothetical protein
CICLE_v10025048mg [Citrus clementina]
Length = 637
Score = 89.0 bits (219), Expect = 9e-16
Identities = 39/65 (60%), Positives = 52/65 (80%), Gaps = 1/65 (1%)
Frame = -3
Query: 194 FLSPPTDSKSQLYILQYPLRPRWRPYELDERCREVRFKPKSSQLEVDLSLDVD-NNYDTS 18
F +P D+ S+LY++QYPLRP WRPYELDERC EVR KP +S++E+DLS+DVD NN+D+
Sbjct: 120 FFTPSIDADSKLYVMQYPLRPLWRPYELDERCEEVRVKPSTSEVEMDLSIDVDSNNWDSE 179
Query: 17 VPEKL 3
+L
Sbjct: 180 KASRL 184
>ref|XP_002525112.1| DNA-directed RNA polymerase, putative [Ricinus communis]
gi|223535571|gb|EEF37239.1| DNA-directed RNA polymerase,
putative [Ricinus communis]
Length = 677
Score = 87.4 bits (215), Expect = 3e-15
Identities = 37/63 (58%), Positives = 50/63 (79%)
Frame = -3
Query: 194 FLSPPTDSKSQLYILQYPLRPRWRPYELDERCREVRFKPKSSQLEVDLSLDVDNNYDTSV 15
F +P DS +QLY++QYPLRP WRPYELDERC EVR KP+S+++EVDL++D +N+D +
Sbjct: 124 FFTPSIDSATQLYVMQYPLRPCWRPYELDERCEEVRVKPQSTEVEVDLTIDDSSNWDPAQ 183
Query: 14 PEK 6
K
Sbjct: 184 ASK 186
>ref|NP_199764.1| SIN-like protein [Arabidopsis thaliana] gi|10177619|dbj|BAB10766.1|
unnamed protein product [Arabidopsis thaliana]
gi|332008443|gb|AED95826.1| SIN-like protein
[Arabidopsis thaliana]
Length = 689
Score = 86.3 bits (212), Expect = 6e-15
Identities = 37/60 (61%), Positives = 47/60 (78%), Gaps = 1/60 (1%)
Frame = -3
Query: 194 FLSPPTDSKSQLYILQYPLRPRWRPYELDERCREVRFKPKSSQLEVDLSLDV-DNNYDTS 18
F P D+ +QLY+LQYPLRP WRPYE+DERC EVR P +SQ+E+DLS+DV NYD++
Sbjct: 125 FFKPSIDANTQLYVLQYPLRPSWRPYEMDERCEEVRVNPSTSQVEIDLSMDVHSKNYDSN 184
>ref|XP_006279575.1| hypothetical protein CARUB_v10025904mg [Capsella rubella]
gi|482548279|gb|EOA12473.1| hypothetical protein
CARUB_v10025904mg [Capsella rubella]
Length = 800
Score = 85.5 bits (210), Expect = 1e-14
Identities = 37/59 (62%), Positives = 46/59 (77%), Gaps = 1/59 (1%)
Frame = -3
Query: 194 FLSPPTDSKSQLYILQYPLRPRWRPYELDERCREVRFKPKSSQLEVDLSLDV-DNNYDT 21
F P D+ +QLY+LQYPLRP WRPYE+DERC EVR P +SQ+E+DLS+DV NYD+
Sbjct: 291 FFKPSIDADTQLYVLQYPLRPSWRPYEMDERCEEVRVNPSTSQVEIDLSMDVHSKNYDS 349
>ref|XP_006391982.1| hypothetical protein EUTSA_v10023969mg, partial [Eutrema
salsugineum] gi|557088488|gb|ESQ29268.1| hypothetical
protein EUTSA_v10023969mg, partial [Eutrema salsugineum]
Length = 468
Score = 84.7 bits (208), Expect = 2e-14
Identities = 37/65 (56%), Positives = 49/65 (75%), Gaps = 1/65 (1%)
Frame = -3
Query: 194 FLSPPTDSKSQLYILQYPLRPRWRPYELDERCREVRFKPKSSQLEVDLSLDV-DNNYDTS 18
F +P ++ S+LY+LQYPLRP WRPYE+DERC EVR P +SQ+EVDLS+++ NYD+
Sbjct: 106 FFNPSIEANSKLYVLQYPLRPSWRPYEMDERCEEVRVNPSTSQVEVDLSMNIHSRNYDSK 165
Query: 17 VPEKL 3
KL
Sbjct: 166 FGSKL 170
>ref|XP_007201935.1| hypothetical protein PRUPE_ppa002228mg [Prunus persica]
gi|462397466|gb|EMJ03134.1| hypothetical protein
PRUPE_ppa002228mg [Prunus persica]
Length = 698
Score = 84.7 bits (208), Expect = 2e-14
Identities = 38/65 (58%), Positives = 48/65 (73%), Gaps = 1/65 (1%)
Frame = -3
Query: 194 FLSPPTDSKSQLYILQYPLRPRWRPYELDERCREVRFKPKSSQLEVDLSLDVD-NNYDTS 18
F +P D SQLY+LQYPLRP WRPYEL+ RC EVR KP +S++E+DLSL++D NYD
Sbjct: 117 FFNPHIDDNSQLYVLQYPLRPWWRPYELENRCEEVRLKPATSEMEIDLSLNLDPKNYDED 176
Query: 17 VPEKL 3
+L
Sbjct: 177 CGNRL 181
>ref|XP_006590438.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC5-like
[Glycine max]
Length = 697
Score = 84.3 bits (207), Expect = 2e-14
Identities = 33/56 (58%), Positives = 48/56 (85%)
Frame = -3
Query: 194 FLSPPTDSKSQLYILQYPLRPRWRPYELDERCREVRFKPKSSQLEVDLSLDVDNNY 27
F SP D+++QLY+ QYPLRP WRPY+LDE+C EVR K K+S++E+DLS+D+D+++
Sbjct: 117 FFSPSVDAQTQLYVFQYPLRPSWRPYDLDEQCEEVRLKTKTSEVEIDLSIDLDSDH 172
>gb|AEI98616.1| hypothetical protein 111O18.3 [Coffea canephora]
Length = 643
Score = 84.3 bits (207), Expect = 2e-14
Identities = 37/65 (56%), Positives = 52/65 (80%), Gaps = 1/65 (1%)
Frame = -3
Query: 194 FLSPPTDSKSQLYILQYPLRPRWRPYELDERCREVRFKPKSSQLEVDLSLDVDN-NYDTS 18
+L+P D ++LY+LQYPLRP WRPYELD+RC EVR K KS+++EVDL++DVD+ NYD+
Sbjct: 114 YLTPSIDPNTKLYVLQYPLRPLWRPYELDDRCEEVRVKCKSAEVEVDLAVDVDSKNYDSD 173
Query: 17 VPEKL 3
++
Sbjct: 174 ADPRV 178
>ref|XP_006395054.1| hypothetical protein EUTSA_v10003751mg [Eutrema salsugineum]
gi|557091693|gb|ESQ32340.1| hypothetical protein
EUTSA_v10003751mg [Eutrema salsugineum]
Length = 682
Score = 83.2 bits (204), Expect = 5e-14
Identities = 36/65 (55%), Positives = 48/65 (73%), Gaps = 1/65 (1%)
Frame = -3
Query: 194 FLSPPTDSKSQLYILQYPLRPRWRPYELDERCREVRFKPKSSQLEVDLSLDV-DNNYDTS 18
F +P D+ ++LY+LQYPLRP WRPYE+DERC VR P +SQ+E+DLS+DV NYD+
Sbjct: 121 FFNPSIDANTKLYVLQYPLRPSWRPYEMDERCEAVRVNPSTSQVEIDLSMDVHSRNYDSK 180
Query: 17 VPEKL 3
+L
Sbjct: 181 FGSEL 185
>ref|XP_004300617.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC5-like
[Fragaria vesca subsp. vesca]
Length = 685
Score = 82.8 bits (203), Expect = 7e-14
Identities = 36/65 (55%), Positives = 49/65 (75%), Gaps = 1/65 (1%)
Frame = -3
Query: 194 FLSPPTDSKSQLYILQYPLRPRWRPYELDERCREVRFKPKSSQLEVDLSLDV-DNNYDTS 18
F +P DS +QLY+LQYPLRPRWRPYEL++RC E+R KP ++++EVDLS+D+ N D
Sbjct: 116 FFNPNVDSNTQLYVLQYPLRPRWRPYELEDRCEEIRVKPGTAEVEVDLSIDLYSKNCDQE 175
Query: 17 VPEKL 3
+L
Sbjct: 176 FANRL 180
>ref|XP_004292429.1| PREDICTED: uncharacterized protein LOC101304068 [Fragaria vesca
subsp. vesca]
Length = 418
Score = 82.4 bits (202), Expect = 9e-14
Identities = 36/52 (69%), Positives = 43/52 (82%)
Frame = -3
Query: 194 FLSPPTDSKSQLYILQYPLRPRWRPYELDERCREVRFKPKSSQLEVDLSLDV 39
F SP DS +QLYILQYPLRPRWR YEL+ RC E+R KP ++Q+EVDLS+DV
Sbjct: 93 FFSPNVDSNTQLYILQYPLRPRWRRYELENRCEEIRVKPDTAQVEVDLSIDV 144