BLASTX nr result

ID: Cocculus22_contig00019716 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus22_contig00019716
         (490 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_007201156.1| hypothetical protein PRUPE_ppa004264mg [Prun...    76   6e-12
ref|XP_002270788.1| PREDICTED: pentatricopeptide repeat-containi...    69   9e-10
gb|EYU38120.1| hypothetical protein MIMGU_mgv1a004917mg [Mimulus...    62   6e-08
gb|EXC34654.1| hypothetical protein L484_020422 [Morus notabilis]      59   9e-07
ref|XP_006444185.1| hypothetical protein CICLE_v10019759mg [Citr...    57   2e-06
ref|XP_006360543.1| PREDICTED: pentatricopeptide repeat-containi...    56   6e-06

>ref|XP_007201156.1| hypothetical protein PRUPE_ppa004264mg [Prunus persica]
           gi|462396556|gb|EMJ02355.1| hypothetical protein
           PRUPE_ppa004264mg [Prunus persica]
          Length = 519

 Score = 75.9 bits (185), Expect = 6e-12
 Identities = 52/146 (35%), Positives = 76/146 (52%), Gaps = 7/146 (4%)
 Frame = -2

Query: 417 MKRICRLSNIFKAEMILR-RSSVNPQTXXXXXXXXXXXSVGRGVTGIVAQNRCFCS---- 253
           MKR+ +LS+  ++E++ R R S   +T              R    + AQN    S    
Sbjct: 1   MKRVWKLSDAAQSELLCRHRCSSKTKTLPPYNLTLTNSPNYRFTRDVNAQNHSSSSPSSS 60

Query: 252 --NEFPKVISLFTEKATSSTGRIAEEELSSKLLDLAEDLVDNRYDSEKIDGVLETKAASL 79
               FP +I LF +K +    R A E+L  K+  L ++LV N  DS++   VLE K +S 
Sbjct: 61  SPTSFPSIIGLFIDKPSPQDLR-AREDLVHKVTQLRDELVQNSGDSDEFVRVLEEKGSSF 119

Query: 78  IRSYSNGSAMVELLCQLKAWPSLALE 1
             SY NG A+VEL+ QL++WP LA+E
Sbjct: 120 FSSYGNGYAVVELMNQLRSWPHLAVE 145


>ref|XP_002270788.1| PREDICTED: pentatricopeptide repeat-containing protein At2g30780
           [Vitis vinifera] gi|296086664|emb|CBI32299.3| unnamed
           protein product [Vitis vinifera]
          Length = 494

 Score = 68.6 bits (166), Expect = 9e-10
 Identities = 40/79 (50%), Positives = 52/79 (65%)
 Frame = -2

Query: 237 VISLFTEKATSSTGRIAEEELSSKLLDLAEDLVDNRYDSEKIDGVLETKAASLIRSYSNG 58
           +I LF++K +    R A EEL  K+  L ++LV +  DS+ +  VLE K  SL RSYSNG
Sbjct: 43  MIGLFSDKHSELDLR-AREELRGKVSQLRDELVPSGDDSDMVVRVLEEKGESLFRSYSNG 101

Query: 57  SAMVELLCQLKAWPSLALE 1
           SA VELL QL +WP LAL+
Sbjct: 102 SAFVELLKQLSSWPYLALQ 120


>gb|EYU38120.1| hypothetical protein MIMGU_mgv1a004917mg [Mimulus guttatus]
          Length = 504

 Score = 62.4 bits (150), Expect = 6e-08
 Identities = 34/80 (42%), Positives = 53/80 (66%), Gaps = 1/80 (1%)
 Frame = -2

Query: 237 VISLFTEKATSSTGR-IAEEELSSKLLDLAEDLVDNRYDSEKIDGVLETKAASLIRSYSN 61
           ++SLF++K + +    I ++ L  K+  L ++L+    D EKI+ VLE    +L R YS+
Sbjct: 51  IVSLFSDKWSRNPAETILKKNLREKVSKLKDELLTQNEDPEKIEKVLEENGVALFRIYSD 110

Query: 60  GSAMVELLCQLKAWPSLALE 1
           GSA+VELL QLK++P LA+E
Sbjct: 111 GSAVVELLFQLKSFPYLAME 130


>gb|EXC34654.1| hypothetical protein L484_020422 [Morus notabilis]
          Length = 489

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 31/82 (37%), Positives = 49/82 (59%)
 Frame = -2

Query: 246 FPKVISLFTEKATSSTGRIAEEELSSKLLDLAEDLVDNRYDSEKIDGVLETKAASLIRSY 67
           F  +  LFT K+ ++      E+L+ ++  L + L  N +DS+++  VLE     L+R +
Sbjct: 65  FSNISRLFTAKSPTTLSETLTEDLAQEVAQLRDALARNLHDSDEVVRVLEENCGPLLRRF 124

Query: 66  SNGSAMVELLCQLKAWPSLALE 1
           + GSA+V LL QL + PSLALE
Sbjct: 125 AGGSAIVHLLKQLDSRPSLALE 146


>ref|XP_006444185.1| hypothetical protein CICLE_v10019759mg [Citrus clementina]
           gi|567903396|ref|XP_006444186.1| hypothetical protein
           CICLE_v10019759mg [Citrus clementina]
           gi|568852322|ref|XP_006479827.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At2g30780-like isoform X1 [Citrus sinensis]
           gi|557546447|gb|ESR57425.1| hypothetical protein
           CICLE_v10019759mg [Citrus clementina]
           gi|557546448|gb|ESR57426.1| hypothetical protein
           CICLE_v10019759mg [Citrus clementina]
          Length = 513

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 46/146 (31%), Positives = 73/146 (50%), Gaps = 7/146 (4%)
 Frame = -2

Query: 417 MKRICRLSNIFKAEMILRR---SSVNPQTXXXXXXXXXXXSVGRGVTGIVAQNRCFCS-- 253
           MKR+ +LS+  + E++L+R    S  P+T           S     T      R  C+  
Sbjct: 1   MKRVWKLSDAAQTELLLQRLQRHSSKPKTLPPLSVFTLTKSPNHSFT------RDLCAPA 54

Query: 252 --NEFPKVISLFTEKATSSTGRIAEEELSSKLLDLAEDLVDNRYDSEKIDGVLETKAASL 79
               FP ++ L +E  T    R+  ++L+  +  L ++L+ N  D +K+  VL+ K + L
Sbjct: 55  THTVFPTLVRLLSETLTYPDARV-RKDLTQTVSALRDELLANVDDLDKVFRVLDEKGSCL 113

Query: 78  IRSYSNGSAMVELLCQLKAWPSLALE 1
            R +SNG A VEL+ QL + P LALE
Sbjct: 114 FRRHSNGYAFVELMKQLGSRPRLALE 139


>ref|XP_006360543.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g30780-like [Solanum tuberosum]
          Length = 504

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 42/146 (28%), Positives = 74/146 (50%), Gaps = 7/146 (4%)
 Frame = -2

Query: 417 MKRICRLSNIFKAEMILRRSSVNPQTXXXXXXXXXXXSVGRGVTGIV----AQNRCFCSN 250
           MKR+ R+ + F+ E IL++ S                ++GRG    +       +   S+
Sbjct: 2   MKRVWRIHDAFQKEAILQKFS-------------SCYTIGRGSANTLWIRGLAGKASSSS 48

Query: 249 E---FPKVISLFTEKATSSTGRIAEEELSSKLLDLAEDLVDNRYDSEKIDGVLETKAASL 79
           +   +P V +LF ++  S    +  +++  K+  L ++L+    D+EK + +L  K   L
Sbjct: 49  QPAAWPHVFTLFADR-WSPADSLVNQDMREKVSHLKDELLAYSGDAEKFEKILADKGDLL 107

Query: 78  IRSYSNGSAMVELLCQLKAWPSLALE 1
              Y++GSA+VELL QLK+ P LAL+
Sbjct: 108 FSRYADGSAVVELLQQLKSSPGLALQ 133


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