BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus22_contig00019697
         (865 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AHC13197.1| polyprotein [Citrus endogenous pararetrovirus]          98   1e-32
ref|YP_008992013.1| polyprotein [Citrus endogenous pararetroviru...    98   4e-32
gb|AHC13200.1| polyprotein [Citrus endogenous pararetrovirus]          98   7e-32
ref|XP_004497811.1| PREDICTED: genome polyprotein-like [Cicer ar...   109   2e-28
ref|XP_006405193.1| hypothetical protein EUTSA_v10000496mg [Eutr...    80   8e-24
ref|XP_006398074.1| hypothetical protein EUTSA_v10001103mg [Eutr...    79   1e-23
ref|XP_006405665.1| hypothetical protein EUTSA_v10028343mg, part...    78   5e-23
ref|XP_006409622.1| hypothetical protein EUTSA_v10023188mg, part...    94   5e-23
ref|XP_006393720.1| hypothetical protein EUTSA_v10012231mg, part...    94   3e-22
ref|XP_004499727.1| PREDICTED: genome polyprotein-like [Cicer ar...   110   5e-22
ref|XP_004500104.1| PREDICTED: genome polyprotein-like [Cicer ar...   110   7e-22
ref|XP_004491299.1| PREDICTED: genome polyprotein-like [Cicer ar...   110   7e-22
ref|XP_006403349.1| hypothetical protein EUTSA_v10003417mg, part...    75   9e-22
ref|XP_006405940.1| hypothetical protein EUTSA_v10028344mg [Eutr...    91   1e-21
ref|XP_006403079.1| hypothetical protein EUTSA_v10003477mg, part...    87   2e-21
ref|NP_127504.1| ORF I polyprotein [Petunia vein clearing virus]...    74   1e-16
gb|AAO67369.1| polyprotein 1 [Petunia vein clearing virus]             74   1e-16
ref|XP_006398030.1| hypothetical protein EUTSA_v10001272mg [Eutr...    92   3e-16
sp|Q6XKE6.1|POLG_PVCV2 RecName: Full=Genome polyprotein; Contain...    72   6e-16
ref|XP_002317407.1| hypothetical protein POPTR_0011s07150g [Popu...    89   2e-15

>gb|AHC13197.1| polyprotein [Citrus endogenous pararetrovirus]
          Length = 1799

 Score = 98.2 bits (243), Expect(2) = 1e-32
 Identities = 48/116 (41%), Positives = 69/116 (59%)
 Frame = -2

Query: 351  EKMKQEYFSMKCCSLKPKDLHKHYQRMLFRYHHLDGVATPELRYTFIASLPQLIQPELNR 172
            E  +++Y SMKCCSL  KDL  HY+RM   ++ L+G   P L++ F+ASLP+ +QP++ R
Sbjct: 887  EAARRDYLSMKCCSLDAKDLDFHYKRMSLLFYKLNGFNEPTLKHVFLASLPEELQPDIQR 946

Query: 171  LIQTDTRPFTQIALGEIFQLALQALTKLCDDHQAMTNLQKASGSLSPACAKAHLEI 4
             +         I+LG+IFQLA   L KLC+  Q   +L K       AC K +L+I
Sbjct: 947  QLTASNLVIDNISLGKIFQLAKTCLDKLCEQKQFFKDLLKDKEPFRSACKKPYLQI 1002



 Score = 68.9 bits (167), Expect(2) = 1e-32
 Identities = 49/158 (31%), Positives = 73/158 (46%), Gaps = 11/158 (6%)
 Frame = -1

Query: 808  YADISTLTISPSPFPIFMADPQPQSSAHSTTTRANPQ-PIPQPTDPDLMSDTADDP---- 644
            YADI+          I MA P PQ      T+R  P   IP   + ++   +A +     
Sbjct: 740  YADITR---------ILMAQPDPQ------TSRTEPYVDIPSDVEEEMPESSATNQPPPA 784

Query: 643  -----AYHLPRGPWFSFDNLPYEKWHSYFNIMAAHVDAMFFTYPEHSPAELLREFTSKFT 479
                 +     GPWF+FD++P  KW    N M+A +D         +   +LREF ++FT
Sbjct: 785  QTTSSSQKSSNGPWFTFDDIPSYKWRDRLNEMSAWIDLQMLR-SGATTESVLREFATRFT 843

Query: 478  GILRTWINSLGAYARSRLYQ-SGMANFWATFTKEFLGD 368
            G LR W +SLG Y + +  Q   +++  A    +FLGD
Sbjct: 844  GALRDWFDSLGPYRQLQFVQLPEVSSALAILHDQFLGD 881


>ref|YP_008992013.1| polyprotein [Citrus endogenous pararetrovirus]
            gi|565672276|gb|AHC13194.1| polyprotein [Citrus
            endogenous pararetrovirus]
          Length = 1812

 Score = 98.2 bits (243), Expect(2) = 4e-32
 Identities = 48/116 (41%), Positives = 69/116 (59%)
 Frame = -2

Query: 351  EKMKQEYFSMKCCSLKPKDLHKHYQRMLFRYHHLDGVATPELRYTFIASLPQLIQPELNR 172
            E  +++Y SMKCCSL  KDL  HY+RM   ++ L+G   P L++ F+ASLP+ +QP++ R
Sbjct: 900  EAARRDYLSMKCCSLDAKDLDFHYKRMSLLFYKLNGFNEPTLKHVFLASLPEELQPDIQR 959

Query: 171  LIQTDTRPFTQIALGEIFQLALQALTKLCDDHQAMTNLQKASGSLSPACAKAHLEI 4
             +         I+LG+IFQLA   L KLC+  Q   +L K       AC K +L+I
Sbjct: 960  QLTASNLVIDNISLGKIFQLAKTCLDKLCEQKQFFKDLLKDKEPFRSACKKPYLQI 1015



 Score = 67.4 bits (163), Expect(2) = 4e-32
 Identities = 48/158 (30%), Positives = 74/158 (46%), Gaps = 11/158 (6%)
 Frame = -1

Query: 808  YADISTLTISPSPFPIFMADPQPQSSAHSTTTRANPQP-IPQPTDPDLMSDTADDP---- 644
            YADI+          I MA P PQ      T+R  P   IP   + ++   +A +     
Sbjct: 753  YADITR---------ILMAQPDPQ------TSRTEPYVNIPSDVEEEMPESSATNQPPPA 797

Query: 643  -----AYHLPRGPWFSFDNLPYEKWHSYFNIMAAHVDAMFFTYPEHSPAELLREFTSKFT 479
                 +     GPWF++D++P  KW    N M+A +D         + + +LREF ++FT
Sbjct: 798  QTTSSSQKSSNGPWFTYDDIPSYKWRDRLNEMSAWIDLQMLRSGATTES-VLREFATRFT 856

Query: 478  GILRTWINSLGAYARSRLYQ-SGMANFWATFTKEFLGD 368
            G LR W +SLG Y + +  Q   +++  A    +FLGD
Sbjct: 857  GALRDWFDSLGPYRQLQFVQLPEVSSALAILHDQFLGD 894


>gb|AHC13200.1| polyprotein [Citrus endogenous pararetrovirus]
          Length = 1701

 Score = 98.2 bits (243), Expect(2) = 7e-32
 Identities = 48/116 (41%), Positives = 69/116 (59%)
 Frame = -2

Query: 351  EKMKQEYFSMKCCSLKPKDLHKHYQRMLFRYHHLDGVATPELRYTFIASLPQLIQPELNR 172
            E  +++Y SMKCCSL  KDL  HY+RM   ++ L+G   P L++ F+ASLP+ +QP++ R
Sbjct: 789  EAARRDYLSMKCCSLDAKDLDFHYKRMSLLFYKLNGFNEPTLKHVFLASLPEELQPDIQR 848

Query: 171  LIQTDTRPFTQIALGEIFQLALQALTKLCDDHQAMTNLQKASGSLSPACAKAHLEI 4
             +         I+LG+IFQLA   L KLC+  Q   +L K       AC K +L+I
Sbjct: 849  QLTASNLVIDNISLGKIFQLAKTCLDKLCEQKQFFKDLLKDKEPFRSACKKPYLQI 904



 Score = 66.6 bits (161), Expect(2) = 7e-32
 Identities = 44/155 (28%), Positives = 69/155 (44%), Gaps = 8/155 (5%)
 Frame = -1

Query: 808  YADISTLTISPSPFPIFMADPQPQSSAHSTTTRANPQPIPQP-------TDPDLMSDTAD 650
            YADI+ + ++          P+P  ++H+      P  + +          P        
Sbjct: 636  YADITIILMAQPD------QPRPGQTSHTEPYVDIPSEVKEEMSESSATNQPPPAQAHTS 689

Query: 649  DPAYHLPRGPWFSFDNLPYEKWHSYFNIMAAHVDAMFFTYPEHSPAELLREFTSKFTGIL 470
             P      GPWF+FD+LP  KW    N M+A +D         +   +LREF ++FTG L
Sbjct: 690  SPNQKSSNGPWFTFDDLPSYKWRDRLNEMSAWIDLQMLR-SGATTESVLREFATRFTGAL 748

Query: 469  RTWINSLGAYARSRLYQ-SGMANFWATFTKEFLGD 368
            R W +SLG Y + +  Q   +++  A    +FLGD
Sbjct: 749  RDWFDSLGPYRQLQFVQLPEVSSALAILHDQFLGD 783


>ref|XP_004497811.1| PREDICTED: genome polyprotein-like [Cicer arietinum]
          Length = 1951

 Score =  109 bits (272), Expect(2) = 2e-28
 Identities = 53/117 (45%), Positives = 76/117 (64%)
 Frame = -2

Query: 354  DEKMKQEYFSMKCCSLKPKDLHKHYQRMLFRYHHLDGVATPELRYTFIASLPQLIQPELN 175
            D K +QE+F M+CCSLK KDL +HYQRM  RY+ L+G     L+  +I+SLPQ +QPE++
Sbjct: 899  DRKNRQEFFEMRCCSLKVKDLERHYQRMTQRYYVLNGFNDHTLKNIYISSLPQELQPEIH 958

Query: 174  RLIQTDTRPFTQIALGEIFQLALQALTKLCDDHQAMTNLQKASGSLSPACAKAHLEI 4
            R+I    +    ++LG+I Q+AL+AL KLC  HQ  + + +       AC K +LEI
Sbjct: 959  RMIAAARKDVKILSLGQIHQIALEALEKLCTLHQHFSEIVQQKSKFIKACKKPYLEI 1015



 Score = 44.3 bits (103), Expect(2) = 2e-28
 Identities = 25/95 (26%), Positives = 42/95 (44%), Gaps = 1/95 (1%)
 Frame = -1

Query: 625  GPWFSFDNLPYEKWHSYFNIMAAHVDAMFFTYPEHSPAELLREFTSKFTGILRTWINSLG 446
            GPWF+ D++P   W        A +D         +  +++ EF  + TG L+ W ++LG
Sbjct: 809  GPWFTLDDIPPSLWRKRLLEFGAWLDTQMMKTGADT-YKIIEEFCCRMTGTLKEWYHNLG 867

Query: 445  AYARSRLYQ-SGMANFWATFTKEFLGDITTLG*KN 344
               +  L++    A        EF+GD+     KN
Sbjct: 868  PLKQDELHRLVNTAAVLGILHNEFIGDMEIFDRKN 902


>ref|XP_006405193.1| hypothetical protein EUTSA_v10000496mg [Eutrema salsugineum]
            gi|557106321|gb|ESQ46646.1| hypothetical protein
            EUTSA_v10000496mg [Eutrema salsugineum]
          Length = 957

 Score = 79.7 bits (195), Expect(2) = 8e-24
 Identities = 38/116 (32%), Positives = 63/116 (54%)
 Frame = -2

Query: 351  EKMKQEYFSMKCCSLKPKDLHKHYQRMLFRYHHLDGVATPELRYTFIASLPQLIQPELNR 172
            E++++E+F+ KCCSLK +DL KH++R   RY+ L+G+  P L+   ++S+   +  +   
Sbjct: 833  EQLQEEFFTAKCCSLKKRDLAKHFERQTRRYYALNGLNNPSLKQMHLSSIDDYLSQQTKL 892

Query: 171  LIQTDTRPFTQIALGEIFQLALQALTKLCDDHQAMTNLQKASGSLSPACAKAHLEI 4
             I+   +    I++G+I Q   Q L KLC   +        S  LS  CA+  L I
Sbjct: 893  YIRDQAQTVEYISIGQIQQYVFQTLDKLCKQKKFWMEFMDKSKQLSRICARPDLSI 948



 Score = 58.2 bits (139), Expect(2) = 8e-24
 Identities = 30/88 (34%), Positives = 53/88 (60%), Gaps = 1/88 (1%)
 Frame = -1

Query: 616 FSFDNLPYEKWHSYFNIMAAHVDAMFFTYPEHSPAEL-LREFTSKFTGILRTWINSLGAY 440
           F+FD++P+EKW+   +   A +++   T    SP EL +++FT++ +G L+ W NSLG Y
Sbjct: 748 FTFDDIPFEKWNDRLDEFHAWMNSEAIT----SPLELVIQQFTTRLSGALKEWWNSLGEY 803

Query: 439 ARSRLYQSGMANFWATFTKEFLGDITTL 356
            + ++YQ+ +        +EF+G  T L
Sbjct: 804 RQQQVYQTTIPLLLGEIHREFIGTPTHL 831


>ref|XP_006398074.1| hypothetical protein EUTSA_v10001103mg [Eutrema salsugineum]
            gi|557099163|gb|ESQ39527.1| hypothetical protein
            EUTSA_v10001103mg [Eutrema salsugineum]
          Length = 1135

 Score = 79.0 bits (193), Expect(2) = 1e-23
 Identities = 38/116 (32%), Positives = 62/116 (53%)
 Frame = -2

Query: 351  EKMKQEYFSMKCCSLKPKDLHKHYQRMLFRYHHLDGVATPELRYTFIASLPQLIQPELNR 172
            E++++E+F+ KCCSLK +DL KH++R   RY+ L+G+  P L+   ++SL   +  +   
Sbjct: 877  EQLQEEFFTAKCCSLKKRDLAKHFERQTRRYYALNGLNNPSLKQVHLSSLDDYLSQQTKL 936

Query: 171  LIQTDTRPFTQIALGEIFQLALQALTKLCDDHQAMTNLQKASGSLSPACAKAHLEI 4
             I+        I++G+I Q   + L KLC   +        S  LS  CA+  L I
Sbjct: 937  YIRDQGETVEDISIGQIQQYVFRTLDKLCKQKEFWMEFMDKSKQLSRICARPDLSI 992



 Score = 58.2 bits (139), Expect(2) = 1e-23
 Identities = 30/88 (34%), Positives = 53/88 (60%), Gaps = 1/88 (1%)
 Frame = -1

Query: 616  FSFDNLPYEKWHSYFNIMAAHVDAMFFTYPEHSPAEL-LREFTSKFTGILRTWINSLGAY 440
            F+FD++P+EKW+   +   A +++   T    SP EL +++FT++ +G L+ W NSLG Y
Sbjct: 792  FTFDDIPFEKWNDRLDEFHAWMNSEAIT----SPLELVIQQFTARLSGALKEWWNSLGEY 847

Query: 439  ARSRLYQSGMANFWATFTKEFLGDITTL 356
             + ++YQ+ +        +EF+G  T L
Sbjct: 848  RQQQVYQTTIPLLLGEIHREFIGTPTHL 875


>ref|XP_006405665.1| hypothetical protein EUTSA_v10028343mg, partial [Eutrema
           salsugineum] gi|557106803|gb|ESQ47118.1| hypothetical
           protein EUTSA_v10028343mg, partial [Eutrema salsugineum]
          Length = 1104

 Score = 78.2 bits (191), Expect(2) = 5e-23
 Identities = 37/116 (31%), Positives = 63/116 (54%)
 Frame = -2

Query: 351 EKMKQEYFSMKCCSLKPKDLHKHYQRMLFRYHHLDGVATPELRYTFIASLPQLIQPELNR 172
           E++++E+F+ KCCSLK +DL KH++R   RY+ L+G+  P L+   ++S+   +  +   
Sbjct: 371 EQLQEEFFTAKCCSLKKRDLAKHFERQTRRYYALNGLNNPSLKKVHLSSIDDYLSQQTKL 430

Query: 171 LIQTDTRPFTQIALGEIFQLALQALTKLCDDHQAMTNLQKASGSLSPACAKAHLEI 4
            I+   +    I++G+I Q   + L KLC   +        S  LS  CA+  L I
Sbjct: 431 YIRDQGQTVEDISIGQIQQYVFRTLDKLCKQKEFWMEFMDKSKQLSRICARPDLSI 486



 Score = 57.0 bits (136), Expect(2) = 5e-23
 Identities = 30/88 (34%), Positives = 53/88 (60%), Gaps = 1/88 (1%)
 Frame = -1

Query: 616 FSFDNLPYEKWHSYFNIMAAHVDAMFFTYPEHSPAEL-LREFTSKFTGILRTWINSLGAY 440
           F+FD++P+EKW++  +   A +++   T    SP EL +++FT++ +G L+ W NSLG Y
Sbjct: 286 FTFDDIPFEKWNNRLDEFHAWMNSEAIT----SPLELVIQQFTARLSGALKEWWNSLGEY 341

Query: 439 ARSRLYQSGMANFWATFTKEFLGDITTL 356
            + ++YQ  +        +EF+G  T L
Sbjct: 342 RQQQVYQMIIPLLLGEIHREFIGTPTHL 369


>ref|XP_006409622.1| hypothetical protein EUTSA_v10023188mg, partial [Eutrema
           salsugineum] gi|557110784|gb|ESQ51075.1| hypothetical
           protein EUTSA_v10023188mg, partial [Eutrema salsugineum]
          Length = 1101

 Score = 93.6 bits (231), Expect(2) = 5e-23
 Identities = 44/113 (38%), Positives = 69/113 (61%)
 Frame = -2

Query: 342 KQEYFSMKCCSLKPKDLHKHYQRMLFRYHHLDGVATPELRYTFIASLPQLIQPELNRLIQ 163
           ++EY SM+CCS K KDL KHY+RM  R++ L+G+    L+  ++ SLP+ +  E +R++ 
Sbjct: 413 REEYMSMRCCSFKRKDLEKHYERMSKRFYALNGIDDVNLKQAYLNSLPEPLGNETSRILS 472

Query: 162 TDTRPFTQIALGEIFQLALQALTKLCDDHQAMTNLQKASGSLSPACAKAHLEI 4
                 +Q +LGEI+Q++L AL KLC+  +    LQ+    L  AC +  L I
Sbjct: 473 LKNMTLSQASLGEIYQISLSALEKLCNHQKFFKQLQEQGKLLGRACDRPELSI 525



 Score = 41.6 bits (96), Expect(2) = 5e-23
 Identities = 26/78 (33%), Positives = 36/78 (46%)
 Frame = -1

Query: 649 DPAYHLPRGPWFSFDNLPYEKWHSYFNIMAAHVDAMFFTYPEHSPAELLREFTSKFTGIL 470
           +P  H      FSFDN+P  KW      M A +        +  P  ++ +  SKF G L
Sbjct: 311 NPRSHTDSHSGFSFDNVPPSKWRDKIYEMHAWLTEQLLNPGDTLPT-VIDKLISKFHGRL 369

Query: 469 RTWINSLGAYARSRLYQS 416
           R W  SLG Y + ++ QS
Sbjct: 370 RQWWISLGDYRQLQIRQS 387


>ref|XP_006393720.1| hypothetical protein EUTSA_v10012231mg, partial [Eutrema salsugineum]
            gi|557090298|gb|ESQ31006.1| hypothetical protein
            EUTSA_v10012231mg, partial [Eutrema salsugineum]
          Length = 1904

 Score = 94.0 bits (232), Expect(2) = 3e-22
 Identities = 44/113 (38%), Positives = 70/113 (61%)
 Frame = -2

Query: 342  KQEYFSMKCCSLKPKDLHKHYQRMLFRYHHLDGVATPELRYTFIASLPQLIQPELNRLIQ 163
            ++EY SM+CCS K KDL KHY+RM  R++ L+G+    L+ T++ SLP+ +  E +R++ 
Sbjct: 784  REEYMSMRCCSFKRKDLEKHYERMSKRFYALNGIDDVNLKQTYLKSLPEPLGNETSRILS 843

Query: 162  TDTRPFTQIALGEIFQLALQALTKLCDDHQAMTNLQKASGSLSPACAKAHLEI 4
                  +Q +LGEI++++L AL KLC+  +    LQ+    L  AC +  L I
Sbjct: 844  LKNMTLSQASLGEIYKISLAALEKLCNHQKFFKQLQEQGKLLGRACDRPELSI 896



 Score = 38.5 bits (88), Expect(2) = 3e-22
 Identities = 31/114 (27%), Positives = 45/114 (39%)
 Frame = -1

Query: 757 MADPQPQSSAHSTTTRANPQPIPQPTDPDLMSDTADDPAYHLPRGPWFSFDNLPYEKWHS 578
           MA+P  +     +      +   +P  P    D   +P  H       SFDN+P  KW  
Sbjct: 648 MAEPTVEEEDMESDGENISEDRREPQRPQTPPDW--NPRSHTDSHSGLSFDNVPSSKWGD 705

Query: 577 YFNIMAAHVDAMFFTYPEHSPAELLREFTSKFTGILRTWINSLGAYARSRLYQS 416
               M A +           P  +++   SKF G LR W  SLG Y + ++ QS
Sbjct: 706 KIYEMHAWLTEQLLNPGATLPTVIVK-LISKFHGHLRQWWISLGDYRQLQIRQS 758


>ref|XP_004499727.1| PREDICTED: genome polyprotein-like [Cicer arietinum]
          Length = 1645

 Score =  110 bits (276), Expect = 5e-22
 Identities = 53/117 (45%), Positives = 77/117 (65%)
 Frame = -2

Query: 354  DEKMKQEYFSMKCCSLKPKDLHKHYQRMLFRYHHLDGVATPELRYTFIASLPQLIQPELN 175
            D K++QE+F M+CCSLK KDL +HYQRM  RY+ L+G     L+ T I+SLPQ +QPE++
Sbjct: 879  DRKIRQEFFEMRCCSLKVKDLQRHYQRMTQRYYVLNGFNDHTLKNTHISSLPQELQPEIH 938

Query: 174  RLIQTDTRPFTQIALGEIFQLALQALTKLCDDHQAMTNLQKASGSLSPACAKAHLEI 4
            R+I    +    ++LG+I Q+AL+AL  LC  HQ  + + +     + AC K +LEI
Sbjct: 939  RMIAAAQKDVKTLSLGQIHQIALEALENLCRLHQHFSEIVQQKSKFTKACKKPYLEI 995


>ref|XP_004500104.1| PREDICTED: genome polyprotein-like [Cicer arietinum]
          Length = 1170

 Score =  110 bits (275), Expect = 7e-22
 Identities = 52/117 (44%), Positives = 76/117 (64%)
 Frame = -2

Query: 354 DEKMKQEYFSMKCCSLKPKDLHKHYQRMLFRYHHLDGVATPELRYTFIASLPQLIQPELN 175
           D K +QE++ M+CCSLK KDL +HYQRM  RY+ L+G     L+ T+I+SLPQ +QPE++
Sbjct: 339 DRKNRQEFYEMRCCSLKVKDLERHYQRMTQRYYVLNGFNDHSLKNTYISSLPQELQPEIH 398

Query: 174 RLIQTDTRPFTQIALGEIFQLALQALTKLCDDHQAMTNLQKASGSLSPACAKAHLEI 4
           R+I    +    ++LG+I Q+ L+AL KLC  HQ  + + +       AC K +LEI
Sbjct: 399 RMITATQKDIKALSLGQIHQITLEALEKLCRLHQHFSEIVQQKSKFIKACKKPYLEI 455


>ref|XP_004491299.1| PREDICTED: genome polyprotein-like [Cicer arietinum]
          Length = 894

 Score =  110 bits (275), Expect = 7e-22
 Identities = 53/117 (45%), Positives = 76/117 (64%)
 Frame = -2

Query: 354 DEKMKQEYFSMKCCSLKPKDLHKHYQRMLFRYHHLDGVATPELRYTFIASLPQLIQPELN 175
           D K +QE+F M+CCSLK KDL +HYQRM  RY+ L+G     L+  +I+SLPQ +QPE++
Sbjct: 62  DRKNRQEFFEMRCCSLKDKDLERHYQRMTQRYYVLNGFNDHTLKNIYISSLPQELQPEIH 121

Query: 174 RLIQTDTRPFTQIALGEIFQLALQALTKLCDDHQAMTNLQKASGSLSPACAKAHLEI 4
           R+I    +    ++LG+I Q+AL+AL KLC  HQ  + + +       AC K +LEI
Sbjct: 122 RMIAAAQKDVKTLSLGQIHQIALEALEKLCRLHQHFSEVMQQKSKFIKACKKPYLEI 178


>ref|XP_006403349.1| hypothetical protein EUTSA_v10003417mg, partial [Eutrema
           salsugineum] gi|557104462|gb|ESQ44802.1| hypothetical
           protein EUTSA_v10003417mg, partial [Eutrema salsugineum]
          Length = 988

 Score = 75.5 bits (184), Expect(2) = 9e-22
 Identities = 36/116 (31%), Positives = 62/116 (53%)
 Frame = -2

Query: 351 EKMKQEYFSMKCCSLKPKDLHKHYQRMLFRYHHLDGVATPELRYTFIASLPQLIQPELNR 172
           E++++E+F+ KCCSLK +DL KH++R   RY+ L+G+  P L+   ++S+   +  +   
Sbjct: 238 EQLQEEFFTAKCCSLKKRDLAKHFERQTRRYYALNGLNNPSLKQVHLSSIDDYLSQQTKL 297

Query: 171 LIQTDTRPFTQIALGEIFQLALQALTKLCDDHQAMTNLQKASGSLSPACAKAHLEI 4
            I+   +     ++G I Q   + L KLC   +        S  LS  CA+ +L I
Sbjct: 298 YIRDQGQTVEDNSIGPIQQYVFRTLDKLCKQKEFWMEFMDKSKQLSRICARPNLSI 353



 Score = 55.5 bits (132), Expect(2) = 9e-22
 Identities = 29/88 (32%), Positives = 52/88 (59%), Gaps = 1/88 (1%)
 Frame = -1

Query: 616 FSFDNLPYEKWHSYFNIMAAHVDAMFFTYPEHSPAEL-LREFTSKFTGILRTWINSLGAY 440
           F+FD++P+EKW+   +   A +++   T    SP EL +++FT++ +G L+ W NSL  Y
Sbjct: 153 FTFDDIPFEKWNDRLDEFHAWMNSEAIT----SPLELVIQQFTARLSGALKEWWNSLDEY 208

Query: 439 ARSRLYQSGMANFWATFTKEFLGDITTL 356
            + ++YQ+ +        +EF+G  T L
Sbjct: 209 RQQQVYQTTIPVLLGEIHREFIGTPTHL 236


>ref|XP_006405940.1| hypothetical protein EUTSA_v10028344mg [Eutrema salsugineum]
           gi|557107078|gb|ESQ47393.1| hypothetical protein
           EUTSA_v10028344mg [Eutrema salsugineum]
          Length = 1508

 Score = 91.3 bits (225), Expect(2) = 1e-21
 Identities = 43/113 (38%), Positives = 69/113 (61%)
 Frame = -2

Query: 342 KQEYFSMKCCSLKPKDLHKHYQRMLFRYHHLDGVATPELRYTFIASLPQLIQPELNRLIQ 163
           ++EY SM+CCS K KDL KHY+RM  R++ L+G+    L+  ++ SLP+ +  E ++++ 
Sbjct: 389 REEYMSMRCCSFKRKDLEKHYERMSKRFYVLNGIDDVNLKQAYLNSLPEPLGNETSQILS 448

Query: 162 TDTRPFTQIALGEIFQLALQALTKLCDDHQAMTNLQKASGSLSPACAKAHLEI 4
                 +Q +LGEI+Q++L AL KLC+  +    LQ+    L  AC +  L I
Sbjct: 449 LKNMTLSQASLGEIYQISLAALEKLCNHQKFFKQLQEKGKLLGRACDRPELSI 501



 Score = 39.3 bits (90), Expect(2) = 1e-21
 Identities = 24/67 (35%), Positives = 32/67 (47%)
 Frame = -1

Query: 616 FSFDNLPYEKWHSYFNIMAAHVDAMFFTYPEHSPAELLREFTSKFTGILRTWINSLGAYA 437
           FSFDN+P  KW      M A +       P  +   ++ +  SKF G LR W  SLG Y 
Sbjct: 298 FSFDNVPPSKWRDKIYEMHAWLTEQLLN-PGATLPTVIDKLISKFQGRLRQWWISLGDYR 356

Query: 436 RSRLYQS 416
           +  + QS
Sbjct: 357 QLHIRQS 363


>ref|XP_006403079.1| hypothetical protein EUTSA_v10003477mg, partial [Eutrema
           salsugineum] gi|557104186|gb|ESQ44532.1| hypothetical
           protein EUTSA_v10003477mg, partial [Eutrema salsugineum]
          Length = 751

 Score = 87.4 bits (215), Expect(2) = 2e-21
 Identities = 42/113 (37%), Positives = 66/113 (58%)
 Frame = -2

Query: 342 KQEYFSMKCCSLKPKDLHKHYQRMLFRYHHLDGVATPELRYTFIASLPQLIQPELNRLIQ 163
           ++EY SM+CCS K KDL KHY+RM  R + L+G+     +  ++  LP+ +  E +R++ 
Sbjct: 558 REEYMSMRCCSFKRKDLEKHYERMSKRLYALNGIDDVNHKQAYLNQLPEPLGNETSRILS 617

Query: 162 TDTRPFTQIALGEIFQLALQALTKLCDDHQAMTNLQKASGSLSPACAKAHLEI 4
                 +Q +LGEI+Q++L AL KLC+  +    LQ+    L  AC +  L I
Sbjct: 618 LKNMTLSQASLGEIYQISLAALEKLCNHQKFFKQLQEQGTLLGRACDRPELSI 670



 Score = 42.4 bits (98), Expect(2) = 2e-21
 Identities = 26/78 (33%), Positives = 35/78 (44%)
 Frame = -1

Query: 649 DPAYHLPRGPWFSFDNLPYEKWHSYFNIMAAHVDAMFFTYPEHSPAELLREFTSKFTGIL 470
           +P  H      FSFDN+P  KW      M A +       P  +   ++ +  SKF G L
Sbjct: 456 NPRSHTDSHSGFSFDNVPPSKWRDKIYEMLAWLTEQLLN-PGATLPTVIDKLISKFHGRL 514

Query: 469 RTWINSLGAYARSRLYQS 416
           R W  SLG Y   ++ QS
Sbjct: 515 RQWWTSLGDYRELQIRQS 532


>ref|NP_127504.1| ORF I polyprotein [Petunia vein clearing virus]
            gi|82061579|sp|Q91DM0.1|POLG_PVCV1 RecName: Full=Genome
            polyprotein; Contains: RecName: Full=Movement protein;
            Short=MP; Contains: RecName: Full=Capsid protein;
            Short=CP; Contains: RecName: Full=Aspartic protease;
            Short=PR; Contains: RecName: Full=Reverse transcriptase;
            Short=RT gi|14574598|gb|AAK68664.1| ORF I polyprotein
            [petunia vein clearing virus]
          Length = 2179

 Score = 73.9 bits (180), Expect(2) = 1e-16
 Identities = 38/116 (32%), Positives = 65/116 (56%)
 Frame = -2

Query: 351  EKMKQEYFSMKCCSLKPKDLHKHYQRMLFRYHHLDGVATPELRYTFIASLPQLIQPELNR 172
            E+++++ F MKC S   K + +H+QRM+  ++H+ G  +  L+  FI+SLP ++   ++ 
Sbjct: 942  EELRRQIFEMKCLSYDRKKIDRHFQRMIKLFYHIGGDIS--LKQAFISSLPPILSERISA 999

Query: 171  LIQTDTRPFTQIALGEIFQLALQALTKLCDDHQAMTNLQKASGSLSPACAKAHLEI 4
            LI+      TQ+ +G+I Q A   L  LC   +    ++K S  L  AC K+ L I
Sbjct: 1000 LIKERGTSVTQMHVGDIRQTAFYVLDDLCSKRKFFNQMKKMSRDLEKACTKSDLII 1055



 Score = 39.7 bits (91), Expect(2) = 1e-16
 Identities = 31/121 (25%), Positives = 49/121 (40%)
 Frame = -1

Query: 778  PSPFPIFMADPQPQSSAHSTTTRANPQPIPQPTDPDLMSDTADDPAYHLPRGPWFSFDNL 599
            P  F +   +P+  S           +PIP+   P++         +H      FS D++
Sbjct: 808  PQTFMVRPTEPEI-SEVEDEVDGMTEEPIPERR-PEITPPKMVGTGFHT-----FSLDDI 860

Query: 598  PYEKWHSYFNIMAAHVDAMFFTYPEHSPAELLREFTSKFTGILRTWINSLGAYARSRLYQ 419
               KW     I   H   +     E  P  +L EFT++ +G LR W NS+G   ++R   
Sbjct: 861  SITKWPE--RIQDFHTWMLTKQLVEREPFLILSEFTARLSGTLREWWNSVGPDDKNRFLT 918

Query: 418  S 416
            S
Sbjct: 919  S 919


>gb|AAO67369.1| polyprotein 1 [Petunia vein clearing virus]
          Length = 1886

 Score = 73.9 bits (180), Expect(2) = 1e-16
 Identities = 38/116 (32%), Positives = 65/116 (56%)
 Frame = -2

Query: 351  EKMKQEYFSMKCCSLKPKDLHKHYQRMLFRYHHLDGVATPELRYTFIASLPQLIQPELNR 172
            E+++++ F MKC S   K + +H+QRM+  ++H+ G  +  L+  FI+SLP ++   ++ 
Sbjct: 943  EELRRQIFEMKCLSYDRKKIDRHFQRMIKLFYHIGGDIS--LKQAFISSLPPILSERISA 1000

Query: 171  LIQTDTRPFTQIALGEIFQLALQALTKLCDDHQAMTNLQKASGSLSPACAKAHLEI 4
            LI+      TQ+ +G+I Q A   L  LC   +    ++K S  L  AC K+ L I
Sbjct: 1001 LIKERGTSVTQMHVGDIRQTAFYVLDDLCSKRKFFNQMKKMSRDLEKACTKSDLII 1056



 Score = 39.7 bits (91), Expect(2) = 1e-16
 Identities = 31/121 (25%), Positives = 49/121 (40%)
 Frame = -1

Query: 778  PSPFPIFMADPQPQSSAHSTTTRANPQPIPQPTDPDLMSDTADDPAYHLPRGPWFSFDNL 599
            P  F +   +P+  S           +PIP+   P++         +H      FS D++
Sbjct: 809  PQTFMVRPTEPEI-SEVEDEVDGMTEEPIPERR-PEITPPKMVGTGFHT-----FSLDDI 861

Query: 598  PYEKWHSYFNIMAAHVDAMFFTYPEHSPAELLREFTSKFTGILRTWINSLGAYARSRLYQ 419
               KW     I   H   +     E  P  +L EFT++ +G LR W NS+G   ++R   
Sbjct: 862  SITKWPE--RIQDFHTWMLTKQLVEREPFLILSEFTARLSGTLREWWNSVGPDDKNRFLT 919

Query: 418  S 416
            S
Sbjct: 920  S 920


>ref|XP_006398030.1| hypothetical protein EUTSA_v10001272mg [Eutrema salsugineum]
           gi|557099112|gb|ESQ39483.1| hypothetical protein
           EUTSA_v10001272mg [Eutrema salsugineum]
          Length = 828

 Score = 91.7 bits (226), Expect = 3e-16
 Identities = 43/113 (38%), Positives = 69/113 (61%)
 Frame = -2

Query: 342 KQEYFSMKCCSLKPKDLHKHYQRMLFRYHHLDGVATPELRYTFIASLPQLIQPELNRLIQ 163
           ++EY SM+CCS K KDL KHY+RM  R++ L+G+    ++  ++ SLP+ +  E +R++ 
Sbjct: 420 REEYMSMRCCSFKRKDLEKHYERMSKRFYALNGIDDVNMKQAYLNSLPEPLGNETSRILS 479

Query: 162 TDTRPFTQIALGEIFQLALQALTKLCDDHQAMTNLQKASGSLSPACAKAHLEI 4
                 +Q +LGEI+Q++L AL KLC+  +    LQ+    L  AC +  L I
Sbjct: 480 LKNMTLSQASLGEIYQISLAALEKLCNYQKFFKELQEQGKLLGRACDRPELSI 532


>sp|Q6XKE6.1|POLG_PVCV2 RecName: Full=Genome polyprotein; Contains: RecName: Full=Movement
            protein; Short=MP; Contains: RecName: Full=Capsid
            protein; Short=CP; Contains: RecName: Full=Aspartic
            protease; Short=PR; Contains: RecName: Full=Reverse
            transcriptase; Short=RT gi|34328896|gb|AAO67368.1|
            polyprotein 1 [Petunia vein clearing virus]
          Length = 2180

 Score = 71.6 bits (174), Expect(2) = 6e-16
 Identities = 37/116 (31%), Positives = 64/116 (55%)
 Frame = -2

Query: 351  EKMKQEYFSMKCCSLKPKDLHKHYQRMLFRYHHLDGVATPELRYTFIASLPQLIQPELNR 172
            E+++++ F MKC S   K + +H+QRM+  ++H+ G  +  L+  FI+SLP ++   ++ 
Sbjct: 943  EELRRQIFEMKCLSYDRKKIDRHFQRMIKLFYHIGGDIS--LKQAFISSLPPILSERISA 1000

Query: 171  LIQTDTRPFTQIALGEIFQLALQALTKLCDDHQAMTNLQKASGSLSPACAKAHLEI 4
            LI+      TQ+ +G+I Q     L  LC   +    ++K S  L  AC K+ L I
Sbjct: 1001 LIKERGTSGTQMHVGDIRQTGFYVLDDLCSKRKFFNQMKKMSRDLEKACTKSDLII 1056



 Score = 39.7 bits (91), Expect(2) = 6e-16
 Identities = 31/121 (25%), Positives = 49/121 (40%)
 Frame = -1

Query: 778  PSPFPIFMADPQPQSSAHSTTTRANPQPIPQPTDPDLMSDTADDPAYHLPRGPWFSFDNL 599
            P  F +   +P+  S           +PIP+   P++         +H      FS D++
Sbjct: 809  PQTFMVRPTEPEI-SEVEDEVDGMTEEPIPERR-PEITPPKMVGTGFHT-----FSLDDI 861

Query: 598  PYEKWHSYFNIMAAHVDAMFFTYPEHSPAELLREFTSKFTGILRTWINSLGAYARSRLYQ 419
               KW     I   H   +     E  P  +L EFT++ +G LR W NS+G   ++R   
Sbjct: 862  SITKWPE--RIQDFHTWMLTKQLVEREPFLILSEFTARLSGTLREWWNSVGPDDKNRFLT 919

Query: 418  S 416
            S
Sbjct: 920  S 920


>ref|XP_002317407.1| hypothetical protein POPTR_0011s07150g [Populus trichocarpa]
            gi|222860472|gb|EEE98019.1| hypothetical protein
            POPTR_0011s07150g [Populus trichocarpa]
          Length = 950

 Score = 89.4 bits (220), Expect = 2e-15
 Identities = 44/116 (37%), Positives = 65/116 (56%)
 Frame = -2

Query: 351  EKMKQEYFSMKCCSLKPKDLHKHYQRMLFRYHHLDGVATPELRYTFIASLPQLIQPELNR 172
            E  + EYF MKCCS    DL +H+++M  RYH L G   P L++ F+AS+P+ +  E  R
Sbjct: 763  EIARYEYFKMKCCSYLRSDLERHFKKMCRRYHILSGPDDPSLKHAFLASIPRDLADETFR 822

Query: 171  LIQTDTRPFTQIALGEIFQLALQALTKLCDDHQAMTNLQKASGSLSPACAKAHLEI 4
            L +T        +LG IF   L+AL K+CD H+  T + +   ++  AC +  L I
Sbjct: 823  LFKTRKEVIDNQSLGTIFHQVLEALNKMCDQHKYFTKILQPDKTMLRACKRPDLLI 878