BLASTX nr result

ID: Cocculus22_contig00019676 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus22_contig00019676
         (354 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274187.2| PREDICTED: uncharacterized protein LOC100241...    58   1e-06
emb|CBI18818.3| unnamed protein product [Vitis vinifera]               58   1e-06
ref|XP_007047764.1| Transcription initiation factor TFIID subuni...    55   8e-06
ref|XP_007047763.1| Transcription initiation factor TFIID subuni...    55   8e-06

>ref|XP_002274187.2| PREDICTED: uncharacterized protein LOC100241274, partial [Vitis
           vinifera]
          Length = 229

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 26/30 (86%), Positives = 29/30 (96%)
 Frame = +2

Query: 2   VKVEGFQELMGGDTTMKHDAEDHKLTSPSK 91
           VKVEGFQELMGGD TMKHD+E++KLTSPSK
Sbjct: 200 VKVEGFQELMGGDATMKHDSEENKLTSPSK 229


>emb|CBI18818.3| unnamed protein product [Vitis vinifera]
          Length = 256

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 26/30 (86%), Positives = 29/30 (96%)
 Frame = +2

Query: 2   VKVEGFQELMGGDTTMKHDAEDHKLTSPSK 91
           VKVEGFQELMGGD TMKHD+E++KLTSPSK
Sbjct: 227 VKVEGFQELMGGDATMKHDSEENKLTSPSK 256


>ref|XP_007047764.1| Transcription initiation factor TFIID subunit 8, putative isoform 2
           [Theobroma cacao] gi|508700025|gb|EOX91921.1|
           Transcription initiation factor TFIID subunit 8,
           putative isoform 2 [Theobroma cacao]
          Length = 489

 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 24/28 (85%), Positives = 28/28 (100%)
 Frame = +2

Query: 2   VKVEGFQELMGGDTTMKHDAEDHKLTSP 85
           VKVEGFQELMGGDTT+KHD+E++KLTSP
Sbjct: 459 VKVEGFQELMGGDTTLKHDSEENKLTSP 486


>ref|XP_007047763.1| Transcription initiation factor TFIID subunit 8, putative isoform 1
           [Theobroma cacao] gi|508700024|gb|EOX91920.1|
           Transcription initiation factor TFIID subunit 8,
           putative isoform 1 [Theobroma cacao]
          Length = 593

 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 24/28 (85%), Positives = 28/28 (100%)
 Frame = +2

Query: 2   VKVEGFQELMGGDTTMKHDAEDHKLTSP 85
           VKVEGFQELMGGDTT+KHD+E++KLTSP
Sbjct: 563 VKVEGFQELMGGDTTLKHDSEENKLTSP 590


Top