BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus22_contig00019577
         (309 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EXB81505.1| hypothetical protein L484_014313 [Morus notabilis]     112   5e-23
ref|XP_007017910.1| Pentatricopeptide repeat (PPR) superfamily p...   111   9e-23
ref|XP_004292931.1| PREDICTED: pentatricopeptide repeat-containi...   106   4e-21
ref|XP_003603831.1| Pentatricopeptide repeat-containing protein ...   106   4e-21
ref|XP_007136124.1| hypothetical protein PHAVU_009G019800g [Phas...   104   1e-20
emb|CBI18917.3| unnamed protein product [Vitis vinifera]              102   6e-20
ref|XP_002284756.1| PREDICTED: pentatricopeptide repeat-containi...   102   6e-20
emb|CAN77908.1| hypothetical protein VITISV_033177 [Vitis vinifera]   102   6e-20
ref|XP_006473716.1| PREDICTED: pentatricopeptide repeat-containi...   100   4e-19
ref|XP_006435257.1| hypothetical protein CICLE_v10000789mg [Citr...   100   4e-19
ref|XP_002307751.2| hypothetical protein POPTR_0005s26670g [Popu...   100   4e-19
ref|XP_006581146.1| PREDICTED: pentatricopeptide repeat-containi...    99   8e-19
ref|XP_004500913.1| PREDICTED: pentatricopeptide repeat-containi...    98   1e-18
ref|XP_006342083.1| PREDICTED: pentatricopeptide repeat-containi...    93   4e-17
ref|XP_004238390.1| PREDICTED: pentatricopeptide repeat-containi...    92   7e-17
ref|XP_002890377.1| pentatricopeptide repeat-containing protein ...    89   8e-16
ref|XP_006306084.1| hypothetical protein CARUB_v10011494mg [Caps...    87   2e-15
ref|XP_006416414.1| hypothetical protein EUTSA_v10007329mg [Eutr...    86   7e-15
ref|XP_004136485.1| PREDICTED: pentatricopeptide repeat-containi...    85   9e-15
gb|EYU17558.1| hypothetical protein MIMGU_mgv1a004143mg [Mimulus...    84   2e-14

>gb|EXB81505.1| hypothetical protein L484_014313 [Morus notabilis]
          Length = 535

 Score =  112 bits (280), Expect = 5e-23
 Identities = 52/83 (62%), Positives = 66/83 (79%), Gaps = 2/83 (2%)
 Frame = -3

Query: 244 ETNNNSLTMSPTETLVADKLHALIKDHHRKNPNPSLQS--PSPDLTIPTLSIDFSQLSPI 71
           +T   S ++SP ETL+ADKLH+LIK HHRKNP+P      P+P+ TIP+LS+DFSQ+S +
Sbjct: 46  QTGPTSSSLSPEETLIADKLHSLIKGHHRKNPSPDSNPSPPNPNFTIPSLSLDFSQISAV 105

Query: 70  DSISPSVVRRVIEKCGSVRHGIP 2
            S+SP +VRRVIEKCG VRHGIP
Sbjct: 106 HSLSPGIVRRVIEKCGGVRHGIP 128


>ref|XP_007017910.1| Pentatricopeptide repeat (PPR) superfamily protein [Theobroma
           cacao] gi|508723238|gb|EOY15135.1| Pentatricopeptide
           repeat (PPR) superfamily protein [Theobroma cacao]
          Length = 532

 Score =  111 bits (278), Expect = 9e-23
 Identities = 55/104 (52%), Positives = 69/104 (66%), Gaps = 2/104 (1%)
 Frame = -3

Query: 307 FKPYCXXXXXXXXLDVQEHEIETNNNSLTMSPTETLVADKLHALIKDHHRKNPNPSLQS- 131
           FK Y          + +E  +        +SP E  VA+K H+LIKDHHRKNPNP L S 
Sbjct: 22  FKLYSSTPTSLRGDESEETNMSEKPKIAALSPEEAEVAEKFHSLIKDHHRKNPNPDLNSA 81

Query: 130 -PSPDLTIPTLSIDFSQLSPIDSISPSVVRRVIEKCGSVRHGIP 2
            P+PD TIP+LS+DFS++S + SISPS+VR VI+KCG VRHGIP
Sbjct: 82  PPTPDFTIPSLSLDFSKISAVHSISPSLVRHVIDKCGGVRHGIP 125


>ref|XP_004292931.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20300,
           mitochondrial-like [Fragaria vesca subsp. vesca]
          Length = 529

 Score =  106 bits (264), Expect = 4e-21
 Identities = 52/88 (59%), Positives = 64/88 (72%), Gaps = 2/88 (2%)
 Frame = -3

Query: 259 QEHEIETNNNSLTMSPTETLVADKLHALIKDHHRKNPNPSLQS--PSPDLTIPTLSIDFS 86
           + H  + N+ S T    ETL+AD  H+LIKDHHR NPNP+     P+P  TIP+LS DFS
Sbjct: 33  EPHLQDENDTSQTAPTEETLIADTFHSLIKDHHRNNPNPNPNPAPPNPTYTIPSLSSDFS 92

Query: 85  QLSPIDSISPSVVRRVIEKCGSVRHGIP 2
           QLS   S+SP+VVRRV+EKCG+VRHGIP
Sbjct: 93  QLSAAGSVSPAVVRRVLEKCGAVRHGIP 120


>ref|XP_003603831.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355492879|gb|AES74082.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 530

 Score =  106 bits (264), Expect = 4e-21
 Identities = 49/90 (54%), Positives = 65/90 (72%), Gaps = 3/90 (3%)
 Frame = -3

Query: 262 VQEHEIETNNNS---LTMSPTETLVADKLHALIKDHHRKNPNPSLQSPSPDLTIPTLSID 92
           V EH+   NN +     +SP +T + DK H +IKDH+RKNPNP+  SPS +L+IP LSI+
Sbjct: 33  VSEHDTNDNNTTPQNTNLSPEDTHIVDKFHTIIKDHYRKNPNPNAVSPSLNLSIPDLSIE 92

Query: 91  FSQLSPIDSISPSVVRRVIEKCGSVRHGIP 2
           FS++S + S+SPS+ RR IEKC  VRHGIP
Sbjct: 93  FSKISTVYSVSPSITRRAIEKCSGVRHGIP 122


>ref|XP_007136124.1| hypothetical protein PHAVU_009G019800g [Phaseolus vulgaris]
           gi|561009211|gb|ESW08118.1| hypothetical protein
           PHAVU_009G019800g [Phaseolus vulgaris]
          Length = 530

 Score =  104 bits (259), Expect = 1e-20
 Identities = 49/75 (65%), Positives = 60/75 (80%), Gaps = 2/75 (2%)
 Frame = -3

Query: 220 MSPTETLVADKLHALIKDHHRKNP--NPSLQSPSPDLTIPTLSIDFSQLSPIDSISPSVV 47
           +SP ET +ADKLHA IKDHHR+NP  NP+   P+P+L IP LS+DFS LS   ++SP+V 
Sbjct: 49  LSPEETTLADKLHAAIKDHHRRNPSPNPNAAPPTPNLAIPDLSLDFSALSAAQTLSPAVA 108

Query: 46  RRVIEKCGSVRHGIP 2
           RRVIEKCG+VRHGIP
Sbjct: 109 RRVIEKCGAVRHGIP 123


>emb|CBI18917.3| unnamed protein product [Vitis vinifera]
          Length = 496

 Score =  102 bits (254), Expect = 6e-20
 Identities = 50/89 (56%), Positives = 64/89 (71%), Gaps = 3/89 (3%)
 Frame = -3

Query: 259 QEHEIETNNNS---LTMSPTETLVADKLHALIKDHHRKNPNPSLQSPSPDLTIPTLSIDF 89
           +E E++ + NS   + +S  ETLV +K H+LIK H RKN NP   SP+P  TI +LS DF
Sbjct: 37  EEDEVKESGNSAVNIVLSSEETLVVEKFHSLIKSHQRKNTNPDPISPNPHYTIASLSFDF 96

Query: 88  SQLSPIDSISPSVVRRVIEKCGSVRHGIP 2
           SQ+S  DS+S ++VRRVIEKCG VRHGIP
Sbjct: 97  SQISSADSVSSAIVRRVIEKCGGVRHGIP 125


>ref|XP_002284756.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20300,
           mitochondrial-like [Vitis vinifera]
          Length = 531

 Score =  102 bits (254), Expect = 6e-20
 Identities = 50/89 (56%), Positives = 64/89 (71%), Gaps = 3/89 (3%)
 Frame = -3

Query: 259 QEHEIETNNNS---LTMSPTETLVADKLHALIKDHHRKNPNPSLQSPSPDLTIPTLSIDF 89
           +E E++ + NS   + +S  ETLV +K H+LIK H RKN NP   SP+P  TI +LS DF
Sbjct: 37  EEDEVKESGNSAVNIVLSSEETLVVEKFHSLIKSHQRKNTNPDPISPNPHYTIASLSFDF 96

Query: 88  SQLSPIDSISPSVVRRVIEKCGSVRHGIP 2
           SQ+S  DS+S ++VRRVIEKCG VRHGIP
Sbjct: 97  SQISSADSVSSAIVRRVIEKCGGVRHGIP 125


>emb|CAN77908.1| hypothetical protein VITISV_033177 [Vitis vinifera]
          Length = 1563

 Score =  102 bits (254), Expect = 6e-20
 Identities = 50/89 (56%), Positives = 64/89 (71%), Gaps = 3/89 (3%)
 Frame = -3

Query: 259  QEHEIETNNNS---LTMSPTETLVADKLHALIKDHHRKNPNPSLQSPSPDLTIPTLSIDF 89
            +E E++ + NS   + +S  ETLV +K H+LIK H RKN NP   SP+P  TI +LS DF
Sbjct: 1069 EEDEVKESGNSAVNIVLSSEETLVVEKFHSLIKSHQRKNTNPDPISPNPHYTIASLSFDF 1128

Query: 88   SQLSPIDSISPSVVRRVIEKCGSVRHGIP 2
            SQ+S  DS+S ++VRRVIEKCG VRHGIP
Sbjct: 1129 SQISSADSVSSAIVRRVIEKCGGVRHGIP 1157


>ref|XP_006473716.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20300,
           mitochondrial-like [Citrus sinensis]
          Length = 538

 Score = 99.8 bits (247), Expect = 4e-19
 Identities = 55/87 (63%), Positives = 63/87 (72%), Gaps = 7/87 (8%)
 Frame = -3

Query: 241 TNNNSLT----MSPTETLVADKLHALIKDHHRKNPNPSLQS-PS--PDLTIPTLSIDFSQ 83
           TN NS      +SP ETL+++K H+LIKDHHRKNPNPS  S PS  PD TIP+LS+ FSQ
Sbjct: 45  TNPNSSPDTPFLSPEETLISEKFHSLIKDHHRKNPNPSSNSNPSLNPDFTIPSLSLGFSQ 104

Query: 82  LSPIDSISPSVVRRVIEKCGSVRHGIP 2
           +S   SISPS VR VIEK   VRHGIP
Sbjct: 105 ISTAHSISPSTVRHVIEKSCGVRHGIP 131


>ref|XP_006435257.1| hypothetical protein CICLE_v10000789mg [Citrus clementina]
           gi|557537379|gb|ESR48497.1| hypothetical protein
           CICLE_v10000789mg [Citrus clementina]
          Length = 541

 Score = 99.8 bits (247), Expect = 4e-19
 Identities = 55/87 (63%), Positives = 63/87 (72%), Gaps = 7/87 (8%)
 Frame = -3

Query: 241 TNNNSLT----MSPTETLVADKLHALIKDHHRKNPNPSLQS-PS--PDLTIPTLSIDFSQ 83
           TN NS      +SP ETL+++K H+LIKDHHRKNPNPS  S PS  PD TIP+LS+ FSQ
Sbjct: 48  TNPNSSPDTPFLSPEETLISEKFHSLIKDHHRKNPNPSSNSNPSLNPDFTIPSLSLGFSQ 107

Query: 82  LSPIDSISPSVVRRVIEKCGSVRHGIP 2
           +S   SISPS VR VIEK   VRHGIP
Sbjct: 108 ISTAHSISPSTVRHVIEKSCGVRHGIP 134


>ref|XP_002307751.2| hypothetical protein POPTR_0005s26670g [Populus trichocarpa]
           gi|550339796|gb|EEE94747.2| hypothetical protein
           POPTR_0005s26670g [Populus trichocarpa]
          Length = 533

 Score = 99.8 bits (247), Expect = 4e-19
 Identities = 53/89 (59%), Positives = 66/89 (74%), Gaps = 1/89 (1%)
 Frame = -3

Query: 265 DVQEHEIETNNNSLTMSPTETLVADKLHALIKDHHRKNPNPSLQSPSPDLTIPTLSIDFS 86
           D +EH I+T    L  SP ET VA+KLH+LIKDH+R NPN +L  P P  TIP+LS+DFS
Sbjct: 41  DDEEHTIKTPKTPL--SPEETSVAEKLHSLIKDHYRNNPNKTL-PPDPTYTIPSLSLDFS 97

Query: 85  Q-LSPIDSISPSVVRRVIEKCGSVRHGIP 2
           Q +S + SISPS++R VIE+ G VRHGIP
Sbjct: 98  QTISTVHSISPSIIRHVIEQSGGVRHGIP 126


>ref|XP_006581146.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20300,
           mitochondrial-like isoform X1 [Glycine max]
           gi|571458531|ref|XP_006581147.1| PREDICTED:
           pentatricopeptide repeat-containing protein At1g20300,
           mitochondrial-like isoform X2 [Glycine max]
          Length = 564

 Score = 98.6 bits (244), Expect = 8e-19
 Identities = 54/105 (51%), Positives = 65/105 (61%), Gaps = 3/105 (2%)
 Frame = -3

Query: 307 FKPYCXXXXXXXXL-DVQEHEIETNNNSLTMSPTETLVADKLHALIKDHHRKNP--NPSL 137
           FKPY           D+Q    +  N    +SP ET +ADK HA IK+HHR+NP  NP+ 
Sbjct: 57  FKPYSSSASALVPELDIQPDTPQNPN----LSPEETTLADKFHAAIKEHHRRNPTPNPNA 112

Query: 136 QSPSPDLTIPTLSIDFSQLSPIDSISPSVVRRVIEKCGSVRHGIP 2
             P+P+LTIP LS+ FS +S    ISPSV  RVIEKCG VRHGIP
Sbjct: 113 PPPTPNLTIPDLSLAFSAISAAHPISPSVAHRVIEKCGGVRHGIP 157


>ref|XP_004500913.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20300,
           mitochondrial-like [Cicer arietinum]
          Length = 530

 Score = 98.2 bits (243), Expect = 1e-18
 Identities = 47/83 (56%), Positives = 60/83 (72%), Gaps = 2/83 (2%)
 Frame = -3

Query: 244 ETNNNSLTMSPTETLVADKLHALIKDHHRKNPNPSLQS--PSPDLTIPTLSIDFSQLSPI 71
           ET  N+  +SP E+ + DK H  IKDH+ KNPNP+     PS +L+IP LSIDF+++S +
Sbjct: 41  ETPQNTTNLSPEESQIVDKFHTAIKDHYSKNPNPNPNPLPPSLNLSIPDLSIDFTKISTV 100

Query: 70  DSISPSVVRRVIEKCGSVRHGIP 2
            SISPS+ RRVIEKCG VRHG P
Sbjct: 101 HSISPSIARRVIEKCGGVRHGNP 123


>ref|XP_006342083.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20300,
           mitochondrial-like [Solanum tuberosum]
          Length = 549

 Score = 92.8 bits (229), Expect = 4e-17
 Identities = 46/75 (61%), Positives = 56/75 (74%), Gaps = 2/75 (2%)
 Frame = -3

Query: 220 MSPTETLVADKLHALIKDHHRKNPN--PSLQSPSPDLTIPTLSIDFSQLSPIDSISPSVV 47
           +S  E  +A+K+H+LIKDHHRKNP   P+    +P++T PTLS DFS +S   SISP VV
Sbjct: 66  LSEEEAQIAEKIHSLIKDHHRKNPTATPTSIPLNPNITFPTLSFDFSSISDNRSISPPVV 125

Query: 46  RRVIEKCGSVRHGIP 2
            RVIEKCGSVRHGIP
Sbjct: 126 SRVIEKCGSVRHGIP 140


>ref|XP_004238390.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20300,
           mitochondrial-like [Solanum lycopersicum]
          Length = 543

 Score = 92.0 bits (227), Expect = 7e-17
 Identities = 46/75 (61%), Positives = 55/75 (73%), Gaps = 2/75 (2%)
 Frame = -3

Query: 220 MSPTETLVADKLHALIKDHHRKNPN--PSLQSPSPDLTIPTLSIDFSQLSPIDSISPSVV 47
           +S  E  +A+K H+LIKDHHRKNP   P+    +P++T PTLS DFS +S   SISP VV
Sbjct: 60  LSKEEAQIAEKFHSLIKDHHRKNPTATPTSIPLNPNITFPTLSFDFSSISDNRSISPPVV 119

Query: 46  RRVIEKCGSVRHGIP 2
            RVIEKCGSVRHGIP
Sbjct: 120 SRVIEKCGSVRHGIP 134


>ref|XP_002890377.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297336219|gb|EFH66636.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 537

 Score = 88.6 bits (218), Expect = 8e-16
 Identities = 45/77 (58%), Positives = 57/77 (74%), Gaps = 1/77 (1%)
 Frame = -3

Query: 229 SLTMSPTETLVADKLHALIKDHHRKNP-NPSLQSPSPDLTIPTLSIDFSQLSPIDSISPS 53
           S  ++P +T   +K H++IKDH+RKNP NP+    +P LT+P LS+DFSQ+     ISPS
Sbjct: 54  SSLLTPEDTQTVEKFHSIIKDHYRKNPTNPNDAVLNPSLTLPALSLDFSQIDA-SRISPS 112

Query: 52  VVRRVIEKCGSVRHGIP 2
           VVR VIEKCGSVRHGIP
Sbjct: 113 VVRCVIEKCGSVRHGIP 129


>ref|XP_006306084.1| hypothetical protein CARUB_v10011494mg [Capsella rubella]
           gi|482574795|gb|EOA38982.1| hypothetical protein
           CARUB_v10011494mg [Capsella rubella]
          Length = 532

 Score = 87.4 bits (215), Expect = 2e-15
 Identities = 44/77 (57%), Positives = 58/77 (75%), Gaps = 1/77 (1%)
 Frame = -3

Query: 229 SLTMSPTETLVADKLHALIKDHHRKNPNPSLQSP-SPDLTIPTLSIDFSQLSPIDSISPS 53
           S  ++P +T  A+KLH++IKDH+RKNP  S  +  +P LT+P+LS+DFSQ+     ISPS
Sbjct: 49  SPALTPADTQTAEKLHSIIKDHYRKNPTSSNDAVLNPSLTLPSLSLDFSQIE-ASRISPS 107

Query: 52  VVRRVIEKCGSVRHGIP 2
           VV+ VIEKCG VRHGIP
Sbjct: 108 VVQCVIEKCGGVRHGIP 124


>ref|XP_006416414.1| hypothetical protein EUTSA_v10007329mg [Eutrema salsugineum]
           gi|557094185|gb|ESQ34767.1| hypothetical protein
           EUTSA_v10007329mg [Eutrema salsugineum]
          Length = 534

 Score = 85.5 bits (210), Expect = 7e-15
 Identities = 43/77 (55%), Positives = 56/77 (72%), Gaps = 1/77 (1%)
 Frame = -3

Query: 229 SLTMSPTETLVADKLHALIKDHHRKNP-NPSLQSPSPDLTIPTLSIDFSQLSPIDSISPS 53
           S  ++P +T   +K H++IKDH+RKNP NP+    +P  T+P+LS+DFSQ+     ISPS
Sbjct: 51  SPVLTPEDTQTIEKFHSIIKDHYRKNPTNPNDAVLNPSFTLPSLSLDFSQIDA-SRISPS 109

Query: 52  VVRRVIEKCGSVRHGIP 2
           VVR VIEKCG VRHGIP
Sbjct: 110 VVRCVIEKCGGVRHGIP 126


>ref|XP_004136485.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20300,
           mitochondrial-like [Cucumis sativus]
           gi|449519964|ref|XP_004167004.1| PREDICTED:
           pentatricopeptide repeat-containing protein At1g20300,
           mitochondrial-like [Cucumis sativus]
          Length = 534

 Score = 85.1 bits (209), Expect = 9e-15
 Identities = 40/73 (54%), Positives = 54/73 (73%)
 Frame = -3

Query: 220 MSPTETLVADKLHALIKDHHRKNPNPSLQSPSPDLTIPTLSIDFSQLSPIDSISPSVVRR 41
           +SP +  V++K HALIK+++R+NP P    P P+ TI +LS D SQ+S   S+SP+VVR 
Sbjct: 55  LSPEQIQVSEKFHALIKEYYRRNPGPDSTPPCPNFTISSLSNDLSQISAPHSVSPAVVRY 114

Query: 40  VIEKCGSVRHGIP 2
           VIEK G+VRHGIP
Sbjct: 115 VIEKSGAVRHGIP 127


>gb|EYU17558.1| hypothetical protein MIMGU_mgv1a004143mg [Mimulus guttatus]
          Length = 542

 Score = 84.0 bits (206), Expect = 2e-14
 Identities = 41/76 (53%), Positives = 52/76 (68%), Gaps = 3/76 (3%)
 Frame = -3

Query: 220 MSPTETLVADKLHALIKDHHRKNPNPSLQSPSP---DLTIPTLSIDFSQLSPIDSISPSV 50
           +SP ETL A+K ++LIKDHHR NPN  L   +P   D   P+L+ DF+ +S   S SP+V
Sbjct: 59  LSPEETLAAEKFYSLIKDHHRNNPNLLLNPKTPLNPDAAFPSLNFDFTNISTTHSPSPAV 118

Query: 49  VRRVIEKCGSVRHGIP 2
           VR VIEKC + RHGIP
Sbjct: 119 VRHVIEKCAAPRHGIP 134