BLASTX nr result

ID: Cocculus22_contig00019547 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus22_contig00019547
         (352 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAC95126.1| gag-pol polyprotein [Populus deltoides]                79   9e-13
ref|XP_006372009.1| hypothetical protein POPTR_0018s07320g [Popu...    74   2e-11
emb|CAN69462.1| hypothetical protein VITISV_002919 [Vitis vinifera]    70   4e-10
ref|XP_006369690.1| hypothetical protein POPTR_0001s29060g [Popu...    60   2e-07
ref|XP_006369161.1| hypothetical protein POPTR_0001s17690g [Popu...    57   4e-06

>emb|CAC95126.1| gag-pol polyprotein [Populus deltoides]
          Length = 1382

 Score = 78.6 bits (192), Expect = 9e-13
 Identities = 34/43 (79%), Positives = 39/43 (90%)
 Frame = -2

Query: 129 MAGERDDSLQSINVRLDGKNYSYWSYVIKNFSKGKKLWSYVIG 1
           MA ERDDSLQS++VRLDGKNYSYWSYV++NF KGKK+W YV G
Sbjct: 1   MATERDDSLQSVSVRLDGKNYSYWSYVMRNFLKGKKMWGYVSG 43


>ref|XP_006372009.1| hypothetical protein POPTR_0018s07320g [Populus trichocarpa]
           gi|550318265|gb|ERP49806.1| hypothetical protein
           POPTR_0018s07320g [Populus trichocarpa]
          Length = 280

 Score = 73.9 bits (180), Expect = 2e-11
 Identities = 32/43 (74%), Positives = 37/43 (86%)
 Frame = -2

Query: 129 MAGERDDSLQSINVRLDGKNYSYWSYVIKNFSKGKKLWSYVIG 1
           MA E+DDSLQ ++VRLDGKNY YWSYVI+NF KGKK+W YV G
Sbjct: 1   MATEKDDSLQLVSVRLDGKNYLYWSYVIRNFIKGKKMWGYVSG 43


>emb|CAN69462.1| hypothetical protein VITISV_002919 [Vitis vinifera]
          Length = 993

 Score = 69.7 bits (169), Expect = 4e-10
 Identities = 31/43 (72%), Positives = 35/43 (81%)
 Frame = -2

Query: 129 MAGERDDSLQSINVRLDGKNYSYWSYVIKNFSKGKKLWSYVIG 1
           M GERDDS QSI+VRLDG NYSYWSYV++NF KGK +  YV G
Sbjct: 1   MVGERDDSXQSISVRLDGNNYSYWSYVMRNFLKGKXMXGYVSG 43


>ref|XP_006369690.1| hypothetical protein POPTR_0001s29060g [Populus trichocarpa]
           gi|550348439|gb|ERP66259.1| hypothetical protein
           POPTR_0001s29060g [Populus trichocarpa]
          Length = 116

 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 26/35 (74%), Positives = 32/35 (91%)
 Frame = -2

Query: 129 MAGERDDSLQSINVRLDGKNYSYWSYVIKNFSKGK 25
           MA +RDDSLQ ++VRLDGKNYSYWSYV++NF KG+
Sbjct: 1   MATKRDDSLQYVSVRLDGKNYSYWSYVMRNFLKGQ 35


>ref|XP_006369161.1| hypothetical protein POPTR_0001s17690g [Populus trichocarpa]
           gi|550347556|gb|ERP65730.1| hypothetical protein
           POPTR_0001s17690g [Populus trichocarpa]
          Length = 117

 Score = 56.6 bits (135), Expect = 4e-06
 Identities = 23/37 (62%), Positives = 31/37 (83%)
 Frame = -2

Query: 129 MAGERDDSLQSINVRLDGKNYSYWSYVIKNFSKGKKL 19
           M  ERDD  QS++++LDGKNYSYWSYV++NF K K++
Sbjct: 1   MTTERDDKFQSVSMKLDGKNYSYWSYVMRNFLKVKEI 37


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