BLASTX nr result

ID: Cocculus22_contig00019460 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus22_contig00019460
         (320 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAR86717.1| zinc finger protein [Populus euphratica]                99   5e-19
ref|XP_002531680.1| conserved hypothetical protein [Ricinus comm...    73   5e-11
emb|CAN83576.1| hypothetical protein VITISV_021757 [Vitis vinifera]    70   4e-10
ref|XP_003588283.1| Cytochrome c biogenesis [Medicago truncatula...    56   4e-06

>gb|AAR86717.1| zinc finger protein [Populus euphratica]
          Length = 218

 Score = 99.4 bits (246), Expect = 5e-19
 Identities = 57/86 (66%), Positives = 64/86 (74%)
 Frame = +2

Query: 2   GTRVGAQRN*ESHSI*GETEWAGTSGLVSEPIGQTTTTSLIRLVLAAHPGMEWDGIESTR 181
           GTRVGAQ N ESHSI GETEWAGTSGLVS+  GQTTTTS IRLVL A+PGM+W+   + R
Sbjct: 130 GTRVGAQPNEESHSILGETEWAGTSGLVSD--GQTTTTSFIRLVLPAYPGMKWNRRNAKR 187

Query: 182 SAIGSVSFWGG*ACEEASLSPPRPAA 259
             IG   FWGG     +S +PPRPAA
Sbjct: 188 YRIG-FFFWGGDKL-ASSQAPPRPAA 211


>ref|XP_002531680.1| conserved hypothetical protein [Ricinus communis]
           gi|223528685|gb|EEF30699.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 72

 Score = 72.8 bits (177), Expect = 5e-11
 Identities = 33/38 (86%), Positives = 36/38 (94%)
 Frame = +2

Query: 50  GETEWAGTSGLVSEPIGQTTTTSLIRLVLAAHPGMEWD 163
           GETEWAGTSGLVS+PIGQ TTTS IRLVLAA+PGM+WD
Sbjct: 23  GETEWAGTSGLVSKPIGQMTTTSFIRLVLAAYPGMKWD 60


>emb|CAN83576.1| hypothetical protein VITISV_021757 [Vitis vinifera]
          Length = 194

 Score = 69.7 bits (169), Expect = 4e-10
 Identities = 45/98 (45%), Positives = 50/98 (51%)
 Frame = +3

Query: 3   GLGSGRSVTKRAILFRARQNGRARAVWCPXXXXXXXXXXXXD*Y*PPIPEWNGME*KARE 182
           GLGSGRSVTKRAI FRARQNGRARAVWCP                        +E     
Sbjct: 100 GLGSGRSVTKRAIPFRARQNGRARAVWCPSRLVRRRLP-------------THIERTRSA 146

Query: 183 AL*GRFLFGGDKLVKKQAYPRPDRQLCWVSPSLLNFPR 296
           +  G    GG + +  +  P P    C VSPSLLNFPR
Sbjct: 147 SAIGSVFLGGIRWLLHKLIPAPTGS-CEVSPSLLNFPR 183


>ref|XP_003588283.1| Cytochrome c biogenesis [Medicago truncatula]
           gi|355477331|gb|AES58534.1| Cytochrome c biogenesis
           [Medicago truncatula]
          Length = 860

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 28/39 (71%), Positives = 29/39 (74%)
 Frame = +2

Query: 203 FWGG*ACEEASLSPPRPAALLGLPISPKLPPVFGPSCMR 319
           FWGG A  +A   P R   LLGLPISPKLPPVFGPSCMR
Sbjct: 402 FWGGFASSQAYPRPDRQ--LLGLPISPKLPPVFGPSCMR 438


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