BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus22_contig00019381
         (337 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006853118.1| hypothetical protein AMTR_s00038p00140720 [A...   108   8e-22
ref|XP_006853110.1| hypothetical protein AMTR_s00038p00132760 [A...   100   2e-19
ref|XP_003631789.1| PREDICTED: pentatricopeptide repeat-containi...    95   9e-18
emb|CBI21003.3| unnamed protein product [Vitis vinifera]               95   9e-18
gb|EXB57399.1| hypothetical protein L484_016452 [Morus notabilis]      94   2e-17
ref|XP_007013815.1| Pentatricopeptide repeat superfamily protein...    87   2e-15
ref|XP_002309609.2| pentatricopeptide repeat-containing family p...    84   2e-14
ref|XP_002515553.1| pentatricopeptide repeat-containing protein,...    82   6e-14
gb|EYU21955.1| hypothetical protein MIMGU_mgv1a001349mg [Mimulus...    81   2e-13
ref|XP_006450492.1| hypothetical protein CICLE_v10010816mg [Citr...    79   9e-13
ref|XP_007206864.1| hypothetical protein PRUPE_ppa1027201mg, par...    78   1e-12
ref|XP_007136983.1| hypothetical protein PHAVU_009G090400g [Phas...    74   2e-11
ref|XP_004514126.1| PREDICTED: pentatricopeptide repeat-containi...    70   2e-10
ref|XP_003607325.1| Pentatricopeptide repeat-containing protein ...    66   6e-09
ref|XP_004148467.1| PREDICTED: pentatricopeptide repeat-containi...    64   2e-08
ref|XP_002876279.1| pentatricopeptide repeat-containing protein ...    58   2e-06
ref|NP_191058.1| pentatricopeptide repeat-containing protein [Ar...    57   2e-06
ref|XP_006290588.1| hypothetical protein CARUB_v10016679mg [Caps...    56   6e-06
ref|XP_002879788.1| pentatricopeptide repeat-containing protein ...    56   6e-06

>ref|XP_006853118.1| hypothetical protein AMTR_s00038p00140720 [Amborella trichopoda]
           gi|548856757|gb|ERN14585.1| hypothetical protein
           AMTR_s00038p00140720 [Amborella trichopoda]
          Length = 855

 Score =  108 bits (270), Expect = 8e-22
 Identities = 50/102 (49%), Positives = 77/102 (75%)
 Frame = +1

Query: 31  SHSLISQVEQEIASHRSDSVLTQDHVIEVLLNNQNDPRSALNYFKWAEKQRGFVRGVDVL 210
           S S  SQ++++I+   S++VLTQ+HV+EVLL+NQ D ++AL YF+WAE+QRGF+RG++ L
Sbjct: 66  SLSNTSQIDRQISLSHSNTVLTQEHVVEVLLSNQTDSKAALRYFRWAERQRGFIRGLEPL 125

Query: 211 CIMLHILMKSRRIWAAQYLLNRCVCGNSCPSASVLVDHLLET 336
           C++LHIL +++ + AA+ L+   +  NS   AS  +D LLET
Sbjct: 126 CVVLHILARNKDLPAARNLIKHSLSANSSIGASAFIDRLLET 167


>ref|XP_006853110.1| hypothetical protein AMTR_s00038p00132760 [Amborella trichopoda]
           gi|548856749|gb|ERN14577.1| hypothetical protein
           AMTR_s00038p00132760 [Amborella trichopoda]
          Length = 757

 Score =  100 bits (249), Expect = 2e-19
 Identities = 46/102 (45%), Positives = 72/102 (70%)
 Frame = +1

Query: 31  SHSLISQVEQEIASHRSDSVLTQDHVIEVLLNNQNDPRSALNYFKWAEKQRGFVRGVDVL 210
           SHS  SQ+++EI    + +VLTQ+HV+EVLLNNQ+ P+++L YF+WA+ QRG++RG++ L
Sbjct: 74  SHSKTSQIDREILFSPAKTVLTQEHVVEVLLNNQSHPKASLKYFRWADAQRGYLRGLEPL 133

Query: 211 CIMLHILMKSRRIWAAQYLLNRCVCGNSCPSASVLVDHLLET 336
           CI LHIL +++ + + + L+       S P A   +D L+ET
Sbjct: 134 CITLHILARNKNLPSVRKLIKFFFSKKSIPGAPAFIDCLMET 175


>ref|XP_003631789.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
           mitochondrial-like [Vitis vinifera]
          Length = 877

 Score = 95.1 bits (235), Expect = 9e-18
 Identities = 49/87 (56%), Positives = 63/87 (72%), Gaps = 1/87 (1%)
 Frame = +1

Query: 73  HRSDSVLTQDHVIEVLLNNQNDPRSALNYFKWAEKQRGFVRGVDVLCIMLHILMKSRRIW 252
           H+  + L+Q+HVI+ LL + NDP+SAL YFK AE QRGF+RGVD  C++LHILM+S    
Sbjct: 92  HQETTPLSQNHVIDALLCHVNDPQSALRYFKRAETQRGFIRGVDAYCVLLHILMRSPETH 151

Query: 253 A-AQYLLNRCVCGNSCPSASVLVDHLL 330
             A+ LLNR V G+S PS  V VDHL+
Sbjct: 152 GHARKLLNRYVSGDSDPSPVVFVDHLI 178


>emb|CBI21003.3| unnamed protein product [Vitis vinifera]
          Length = 837

 Score = 95.1 bits (235), Expect = 9e-18
 Identities = 49/87 (56%), Positives = 63/87 (72%), Gaps = 1/87 (1%)
 Frame = +1

Query: 73  HRSDSVLTQDHVIEVLLNNQNDPRSALNYFKWAEKQRGFVRGVDVLCIMLHILMKSRRIW 252
           H+  + L+Q+HVI+ LL + NDP+SAL YFK AE QRGF+RGVD  C++LHILM+S    
Sbjct: 52  HQETTPLSQNHVIDALLCHVNDPQSALRYFKRAETQRGFIRGVDAYCVLLHILMRSPETH 111

Query: 253 A-AQYLLNRCVCGNSCPSASVLVDHLL 330
             A+ LLNR V G+S PS  V VDHL+
Sbjct: 112 GHARKLLNRYVSGDSDPSPVVFVDHLI 138


>gb|EXB57399.1| hypothetical protein L484_016452 [Morus notabilis]
          Length = 907

 Score = 94.0 bits (232), Expect = 2e-17
 Identities = 48/82 (58%), Positives = 61/82 (74%), Gaps = 1/82 (1%)
 Frame = +1

Query: 91  LTQDHVIEVLLNNQNDPRSALNYFKWAEKQRGFVRGVDVLCIMLHILMKSRRI-WAAQYL 267
           LTQ HVI  LL+++NDP SAL YFKWAE+ RGF+RGVD   ++LHILM S+    +AQ L
Sbjct: 84  LTQAHVINTLLSHKNDPYSALKYFKWAERMRGFIRGVDSFSVLLHILMGSQETHGSAQSL 143

Query: 268 LNRCVCGNSCPSASVLVDHLLE 333
           L+  V G+S PSA+V VDHL +
Sbjct: 144 LSLYVSGDSGPSANVFVDHLFD 165


>ref|XP_007013815.1| Pentatricopeptide repeat superfamily protein, putative [Theobroma
           cacao] gi|508784178|gb|EOY31434.1| Pentatricopeptide
           repeat superfamily protein, putative [Theobroma cacao]
          Length = 1159

 Score = 87.4 bits (215), Expect = 2e-15
 Identities = 42/85 (49%), Positives = 62/85 (72%), Gaps = 1/85 (1%)
 Frame = +1

Query: 82  DSVLTQDHVIEVLLNNQNDPRSALNYFKWAEKQRGFVRGVDVLCIMLHILMKSRRI-WAA 258
           D+ LT+ HVI  LL ++N+P SAL YF++ E +RGFVR +DV C++LHIL+ S++     
Sbjct: 378 DTSLTRTHVINTLLIHRNNPESALKYFRFVENKRGFVRSIDVFCVLLHILVGSQQTNKQV 437

Query: 259 QYLLNRCVCGNSCPSASVLVDHLLE 333
           +YLLNR V G+S P+  V +DHL++
Sbjct: 438 KYLLNRFVAGDSGPTPIVFLDHLID 462


>ref|XP_002309609.2| pentatricopeptide repeat-containing family protein [Populus
           trichocarpa] gi|550337148|gb|EEE93132.2|
           pentatricopeptide repeat-containing family protein
           [Populus trichocarpa]
          Length = 841

 Score = 84.3 bits (207), Expect = 2e-14
 Identities = 43/86 (50%), Positives = 58/86 (67%), Gaps = 1/86 (1%)
 Frame = +1

Query: 82  DSVLTQDHVIEVLLNNQNDPRSALNYFKWAEKQRGFVRGVDVLCIMLHILMKSRRIWA-A 258
           DS LTQ   I+ LLN+QNDP+SAL+YF WA ++RG ++ VD LC++LHIL KS      A
Sbjct: 59  DSFLTQTQYIDTLLNHQNDPQSALSYFTWASQKRGLIKSVDALCVLLHILTKSTETCGKA 118

Query: 259 QYLLNRCVCGNSCPSASVLVDHLLET 336
           + LLNR    +  P  SV+V  L+E+
Sbjct: 119 RNLLNRFASDDWGPVPSVVVSRLIES 144


>ref|XP_002515553.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223545497|gb|EEF47002.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 927

 Score = 82.4 bits (202), Expect = 6e-14
 Identities = 43/84 (51%), Positives = 58/84 (69%), Gaps = 1/84 (1%)
 Frame = +1

Query: 82  DSVLTQDHVIEVLLNNQNDPRSALNYFKWAEKQRGFVRGVDVLCIMLHILMK-SRRIWAA 258
           DSVL + +VI+ LL+ + DP SAL YFK  E  RGFVR +D LC++LHIL + S  +  A
Sbjct: 79  DSVLARTNVIDTLLSYKRDPYSALTYFKQLECTRGFVRSLDSLCVLLHILTRSSETLKQA 138

Query: 259 QYLLNRCVCGNSCPSASVLVDHLL 330
           Q LLNR + G+S P  ++LVDH +
Sbjct: 139 QNLLNRFISGDSGPMPNILVDHFI 162


>gb|EYU21955.1| hypothetical protein MIMGU_mgv1a001349mg [Mimulus guttatus]
          Length = 836

 Score = 80.9 bits (198), Expect = 2e-13
 Identities = 43/83 (51%), Positives = 59/83 (71%), Gaps = 2/83 (2%)
 Frame = +1

Query: 91  LTQDHVIEVLLNNQNDPRSALNYFKWAEKQRGFVRGV-DVLCIMLHILMKSR-RIWAAQY 264
           L+Q +V+E LL+N NDPRSAL+YF+WAEKQRGFVR + D   ++LHIL+ S     +A+ 
Sbjct: 69  LSQANVVETLLSNFNDPRSALDYFRWAEKQRGFVREIGDSFLVLLHILVSSHYHHGSARN 128

Query: 265 LLNRCVCGNSCPSASVLVDHLLE 333
           LLN  +  +S PS  VLV  L++
Sbjct: 129 LLNNYLSSDSAPSGGVLVQRLID 151


>ref|XP_006450492.1| hypothetical protein CICLE_v10010816mg [Citrus clementina]
           gi|568859583|ref|XP_006483317.1| PREDICTED:
           pentatricopeptide repeat-containing protein At3g54980,
           mitochondrial-like [Citrus sinensis]
           gi|557553718|gb|ESR63732.1| hypothetical protein
           CICLE_v10010816mg [Citrus clementina]
          Length = 850

 Score = 78.6 bits (192), Expect = 9e-13
 Identities = 39/83 (46%), Positives = 57/83 (68%), Gaps = 1/83 (1%)
 Frame = +1

Query: 91  LTQDHVIEVLLNNQNDPRSALNYFKWAEKQRGFVRGVDVLCIMLHILMKSRRIWA-AQYL 267
           L+Q  VI  LL+ +N+P SA  YFK  E++RGF++ +D  C++LHILMK R     A+ L
Sbjct: 72  LSQTSVISSLLSCRNEPVSAFEYFKRVERRRGFLKSLDTFCVLLHILMKDRESHRYARNL 131

Query: 268 LNRCVCGNSCPSASVLVDHLLET 336
           LN  V G S P+++ ++DHL+ET
Sbjct: 132 LNHYVSGGSEPTSAAIIDHLIET 154


>ref|XP_007206864.1| hypothetical protein PRUPE_ppa1027201mg, partial [Prunus persica]
           gi|462402506|gb|EMJ08063.1| hypothetical protein
           PRUPE_ppa1027201mg, partial [Prunus persica]
          Length = 782

 Score = 78.2 bits (191), Expect = 1e-12
 Identities = 40/84 (47%), Positives = 55/84 (65%), Gaps = 1/84 (1%)
 Frame = +1

Query: 85  SVLTQDHVIEVLLNNQNDPRSALNYFKWAEKQRGFVRGVDVLCIMLHILMKSRRIWA-AQ 261
           S LTQ  VI  LL+++++P SAL +F WAEK+RGF++GVD  C++LHIL         AQ
Sbjct: 1   SELTQTKVISTLLSHRSEPNSALKHFIWAEKERGFLKGVDAFCVLLHILTGFEETHVRAQ 60

Query: 262 YLLNRCVCGNSCPSASVLVDHLLE 333
            LLN+   G+S PS  V  D L++
Sbjct: 61  ILLNQYASGDSGPSQQVFFDRLVD 84


>ref|XP_007136983.1| hypothetical protein PHAVU_009G090400g [Phaseolus vulgaris]
           gi|561010070|gb|ESW08977.1| hypothetical protein
           PHAVU_009G090400g [Phaseolus vulgaris]
          Length = 741

 Score = 73.9 bits (180), Expect = 2e-11
 Identities = 42/92 (45%), Positives = 59/92 (64%), Gaps = 1/92 (1%)
 Frame = +1

Query: 61  EIASHRSDSVLTQDHVIEVLLNNQNDPRSALNYFKWAEKQRGFVRGVDVLCIMLHILMKS 240
           E  S  S  + +Q+ V++ LL  + DP SAL +FK  E++RGFV+ VD+LC++L IL  S
Sbjct: 50  EAQSPESPLIPSQNEVLDTLLLRKADPISALMFFKQVERKRGFVKTVDILCLLLQILASS 109

Query: 241 RRIWA-AQYLLNRCVCGNSCPSASVLVDHLLE 333
                 A+YLLN  V G+S P A VLV+ L+E
Sbjct: 110 PDTHGDAKYLLNNYVFGDSAPCAKVLVELLVE 141


>ref|XP_004514126.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
           mitochondrial-like [Cicer arietinum]
          Length = 850

 Score = 70.5 bits (171), Expect = 2e-10
 Identities = 35/81 (43%), Positives = 58/81 (71%), Gaps = 1/81 (1%)
 Frame = +1

Query: 94  TQDHVIEVLLNNQNDPRSALNYFKWAEKQRGFVRGVDVLCIMLHILMKSRRIWAA-QYLL 270
           +Q+ +++ LL ++++P+SAL +FK  E++RGFV+ VDV  ++L IL  + +  ++ + LL
Sbjct: 75  SQNQILDTLLTHKSNPKSALKFFKGVERKRGFVKTVDVFSLLLQILSSTPQTHSSLRNLL 134

Query: 271 NRCVCGNSCPSASVLVDHLLE 333
           N  V G+S PS  VLV+HLLE
Sbjct: 135 NNYVFGDSSPSPKVLVEHLLE 155


>ref|XP_003607325.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355508380|gb|AES89522.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 834

 Score = 65.9 bits (159), Expect = 6e-09
 Identities = 36/94 (38%), Positives = 60/94 (63%), Gaps = 1/94 (1%)
 Frame = +1

Query: 55  EQEIASHRSDSVLTQDHVIEVLLNNQNDPRSALNYFKWAEKQRGFVRGVDVLCIMLHIL- 231
           E+ I S  S     ++  +  LL+++++P+SAL +F   E++RGFV+ VD + +++HIL 
Sbjct: 46  EKIIISPESQPSEKKNRFLVTLLSHKSNPKSALKFFHQVERKRGFVKTVDFISLLIHILS 105

Query: 232 MKSRRIWAAQYLLNRCVCGNSCPSASVLVDHLLE 333
             S+   + Q+LLN  V G++ PSA V V+ LLE
Sbjct: 106 SNSKTCSSLQFLLNNYVFGDATPSAKVFVECLLE 139


>ref|XP_004148467.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
           mitochondrial-like [Cucumis sativus]
          Length = 775

 Score = 64.3 bits (155), Expect = 2e-08
 Identities = 36/84 (42%), Positives = 50/84 (59%)
 Frame = +1

Query: 82  DSVLTQDHVIEVLLNNQNDPRSALNYFKWAEKQRGFVRGVDVLCIMLHILMKSRRIWAAQ 261
           +S LT+ HVI  LLN ++DP SAL YF+  +K+  F +  D +CI+L IL  S     AQ
Sbjct: 76  NSALTESHVINTLLNRKSDPTSALKYFERIKKKIEFAKCTDAVCILLLILTNSAETHRAQ 135

Query: 262 YLLNRCVCGNSCPSASVLVDHLLE 333
           YL ++   G S    S L+D L+E
Sbjct: 136 YLFDQFASGKSV-RFSCLMDRLVE 158


>ref|XP_002876279.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297322117|gb|EFH52538.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 850

 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 30/79 (37%), Positives = 47/79 (59%), Gaps = 2/79 (2%)
 Frame = +1

Query: 106 VIEVLLNNQNDPRSALNYFKWAEKQRGFVRGVDVLCIMLHILMKSRRIW--AAQYLLNRC 279
           VI+VLLN +N+P +AL ++ WA   RG     DV  +++HIL+ S   +  A+  L+   
Sbjct: 74  VIDVLLNRRNNPEAALRFYNWARPWRGSFEDGDVFWVLIHILVTSPETYGRASDLLIRYV 133

Query: 280 VCGNSCPSASVLVDHLLET 336
              N  P ASVLV +L+++
Sbjct: 134 STSNPTPMASVLVSNLVDS 152


>ref|NP_191058.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75210358|sp|Q9SV46.1|PP282_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At3g54980, mitochondrial; Flags: Precursor
           gi|4678295|emb|CAB41086.1| putative protein [Arabidopsis
           thaliana] gi|28393168|gb|AAO42016.1| unknown protein
           [Arabidopsis thaliana] gi|332645801|gb|AEE79322.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           thaliana]
          Length = 851

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 30/79 (37%), Positives = 46/79 (58%), Gaps = 2/79 (2%)
 Frame = +1

Query: 106 VIEVLLNNQNDPRSALNYFKWAEKQRGFVRGVDVLCIMLHILMKSRRIW--AAQYLLNRC 279
           VI+VLLN +N+P +AL ++ WA   RG     DV  +++HIL+ S   +  A+  L+   
Sbjct: 75  VIDVLLNRRNNPEAALRFYNWARPWRGSFEDGDVFWVLIHILVSSPETYGRASDLLIRYV 134

Query: 280 VCGNSCPSASVLVDHLLET 336
              N  P ASVLV  L+++
Sbjct: 135 STSNPTPMASVLVSKLVDS 153


>ref|XP_006290588.1| hypothetical protein CARUB_v10016679mg [Capsella rubella]
           gi|565465250|ref|XP_006290589.1| hypothetical protein
           CARUB_v10016679mg [Capsella rubella]
           gi|482559295|gb|EOA23486.1| hypothetical protein
           CARUB_v10016679mg [Capsella rubella]
           gi|482559296|gb|EOA23487.1| hypothetical protein
           CARUB_v10016679mg [Capsella rubella]
          Length = 862

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 32/81 (39%), Positives = 49/81 (60%), Gaps = 2/81 (2%)
 Frame = +1

Query: 100 DHVIEVLLNNQNDPRSALNYFKWAEKQRGFVRGVDVLCIMLHILMKSRRIWA-AQYLLNR 276
           + VI+VLLN +N+P SAL ++ WA   RG     DV  +++H+L+ S   +  A+ LL R
Sbjct: 75  ESVIDVLLNRRNNPESALRFYNWARPWRGSFEDGDVFWVLVHVLVGSPETYGRARDLLMR 134

Query: 277 CV-CGNSCPSASVLVDHLLET 336
            V   N  P  SVLV +L+++
Sbjct: 135 YVSTSNPTPMPSVLVSNLVDS 155


>ref|XP_002879788.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297325627|gb|EFH56047.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 867

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 33/92 (35%), Positives = 49/92 (53%), Gaps = 1/92 (1%)
 Frame = +1

Query: 64  IASHRSDSVLTQDHVIEVLLNNQNDPRSALNYFKWAEKQRGFVRGVDVLCIMLHILMKSR 243
           I++  +D+ +   HVIEVLL  +NDP SAL Y  W +  R    G DV  +++HIL  S 
Sbjct: 68  ISTSETDNHVDDAHVIEVLLGRRNDPVSALQYCNWVKPLRSLCEGGDVFWVLIHILFSSP 127

Query: 244 RIW-AAQYLLNRCVCGNSCPSASVLVDHLLET 336
                A  LL   V  N     S +V++L+++
Sbjct: 128 HTHDRASNLLVMFVSSNPTLIPSAMVNNLVDS 159