BLASTX nr result

ID: Cocculus22_contig00019272 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus22_contig00019272
         (1339 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006465594.1| PREDICTED: F-box/FBD/LRR-repeat protein At1g...    60   2e-06
ref|XP_006465593.1| PREDICTED: F-box/FBD/LRR-repeat protein At1g...    60   2e-06
ref|XP_004235623.1| PREDICTED: uncharacterized protein LOC101248...    60   2e-06
ref|XP_004146859.1| PREDICTED: putative F-box/FBD/LRR-repeat pro...    60   2e-06
ref|XP_006343017.1| PREDICTED: uncharacterized protein LOC102598...    59   5e-06

>ref|XP_006465594.1| PREDICTED: F-box/FBD/LRR-repeat protein At1g13570-like isoform X2
            [Citrus sinensis]
          Length = 461

 Score = 60.5 bits (145), Expect = 2e-06
 Identities = 37/102 (36%), Positives = 62/102 (60%), Gaps = 2/102 (1%)
 Frame = -3

Query: 1325 LKLKGCKIATPTSGWAFNLQNLRELSMMEVHVQDHTVERLLTHCRLIEHLSFQRCYELKS 1146
            LKL GCK+  P+     NLQ+L++LS+ EV+V D  V+ L+  CR++E LSF  C+ LK 
Sbjct: 166  LKLFGCKLEQPSH--CANLQSLKKLSLDEVYVNDQMVQSLVRECRVLEDLSFFYCFGLKR 223

Query: 1145 IWVC-SRVLKSMVLD-RCENLKTLVLDAPNLVDLKFVADFMP 1026
            + +  +  LKS++L    + L+++ +  P+L  L+     +P
Sbjct: 224  LRISEAHKLKSLILRFTYQELESVEIAVPSLQQLELSFSRVP 265


>ref|XP_006465593.1| PREDICTED: F-box/FBD/LRR-repeat protein At1g13570-like isoform X1
            [Citrus sinensis]
          Length = 531

 Score = 60.5 bits (145), Expect = 2e-06
 Identities = 37/102 (36%), Positives = 62/102 (60%), Gaps = 2/102 (1%)
 Frame = -3

Query: 1325 LKLKGCKIATPTSGWAFNLQNLRELSMMEVHVQDHTVERLLTHCRLIEHLSFQRCYELKS 1146
            LKL GCK+  P+     NLQ+L++LS+ EV+V D  V+ L+  CR++E LSF  C+ LK 
Sbjct: 166  LKLFGCKLEQPSH--CANLQSLKKLSLDEVYVNDQMVQSLVRECRVLEDLSFFYCFGLKR 223

Query: 1145 IWVC-SRVLKSMVLD-RCENLKTLVLDAPNLVDLKFVADFMP 1026
            + +  +  LKS++L    + L+++ +  P+L  L+     +P
Sbjct: 224  LRISEAHKLKSLILRFTYQELESVEIAVPSLQQLELSFSRVP 265


>ref|XP_004235623.1| PREDICTED: uncharacterized protein LOC101248859 [Solanum
            lycopersicum]
          Length = 559

 Score = 60.1 bits (144), Expect = 2e-06
 Identities = 55/203 (27%), Positives = 93/203 (45%), Gaps = 1/203 (0%)
 Frame = -3

Query: 1265 NLRELSMMEVHVQDHTVERLLTHCRLIEHLSFQRCYELKSIWVCSRVLKSMVLDRCENLK 1086
            NL+ L++   H+ D T   L++H  L+E L    C  L  I + S  LK++ L RC  LK
Sbjct: 312  NLKNLTLNHSHMADKTFHELISHFPLLEKLFLLECRTLHRITILSDKLKTLSLVRCHKLK 371

Query: 1085 TLVLDAPNLVDLKFVADFMPLSTTINTPSLLVAEIDLKRNNLECKPGYMSIDADKFGRDH 906
               +DAPNL+  ++    +P S ++N   L   ++ LK    +    ++    + F    
Sbjct: 372  EANIDAPNLLSFEYTGAELPFS-SMNASRLQEVKLHLKSQKQKSVQKFI----EGFDGKG 426

Query: 905  YMKYVRSQKEVDRETMLDPGLWVERY-YYKLESPDDFYQRELQLRSLLMKFMNAKELTLS 729
            +   + S++ V+    L  GL +  +  YK++        E  L S L  F + K L L 
Sbjct: 427  FKLLLASKQGVNIYEEL-RGLHLSYFGPYKIQLTKSARMVENLLNSHLRDF-HPKTLILK 484

Query: 728  IASAKQLLVHKEDMGWFRKSIPP 660
             +    LLV  ++    ++ IPP
Sbjct: 485  TSLRSDLLVFIQEKILNKEKIPP 507


>ref|XP_004146859.1| PREDICTED: putative F-box/FBD/LRR-repeat protein At1g78840-like
            [Cucumis sativus]
          Length = 469

 Score = 60.1 bits (144), Expect = 2e-06
 Identities = 79/331 (23%), Positives = 141/331 (42%), Gaps = 40/331 (12%)
 Frame = -3

Query: 1337 SIEVLKLKGCKIATPTSGWAFNLQNLRELSMMEVHVQDHTVERLLTHCRLIEHLSFQRCY 1158
            S+ VL +  CK+     G  + L +++ +S++ V  +D TV+RL+++C  I+H+    C 
Sbjct: 134  SLTVLTVGDCKLCPSLDG--YKLLSMKSVSLLGVFAEDETVKRLVSNCPFIQHIKLDSCL 191

Query: 1157 ELKSIWVC-SRVLKSMVLDRCENLKTLVLDAPNLVDLKFVADFMP----LSTTINTPSL- 996
             L+S+W+C +  L +M +     L      A NL   +F   F P    +S+  N  +L 
Sbjct: 192  GLRSLWLCETNELITMEVQNNSGLYEFGTKAMNLQAFEFRGQFQPCCINISSCKNLKTLK 251

Query: 995  --LVAEIDLKRNNLECKPGYMSI---------DADKFGRDHYMKYV----RSQKEVDRET 861
              +VA  D   N    +   + I         ++ +    H  K++     S   VD + 
Sbjct: 252  LSMVAITDDWFNRCFSEFPLLEILALSYCHMLESLRISSSHLKKFILCGCESVTRVDIDA 311

Query: 860  MLDPGLWV--ERYYYKLESPDDFYQRELQLR-------------SLLMKFMNAKELTLSI 726
                GL    +   + L +P    Q +++L                L  F + K LTL  
Sbjct: 312  PCLSGLEFSGDVISFSLNAP-ALSQADIELSPRIFDNPWVVKQIEFLAHFNHLKSLTLQS 370

Query: 725  ASAKQLLVHKEDMGWFRKSIPPLYNLSQLTLNTRIIEYI---SFVEFLDMILSMAPHLHT 555
             + K +++ +E    F     PLY +  L L  RII+ +   S  + +  +L +AP   T
Sbjct: 371  QTGKSVVIPQELRETFGS---PLYGVKHLKL--RIIKPLFSPSLKDLVKALLWIAPQPQT 425

Query: 554  LILNI-YYPIILKFRYDNLEMEKHVADLQFH 465
            + +   +   ILKF Y+    +    D ++H
Sbjct: 426  IAVESGFGKKILKFVYEKARDDGGAVD-EYH 455


>ref|XP_006343017.1| PREDICTED: uncharacterized protein LOC102598789 isoform X1 [Solanum
            tuberosum] gi|565352166|ref|XP_006343018.1| PREDICTED:
            uncharacterized protein LOC102598789 isoform X2 [Solanum
            tuberosum]
          Length = 563

 Score = 58.9 bits (141), Expect = 5e-06
 Identities = 53/203 (26%), Positives = 93/203 (45%), Gaps = 1/203 (0%)
 Frame = -3

Query: 1265 NLRELSMMEVHVQDHTVERLLTHCRLIEHLSFQRCYELKSIWVCSRVLKSMVLDRCENLK 1086
            NL+ L++   H+ D +   L++H  L+E L    C  L  I + S  LK++ L RC  LK
Sbjct: 311  NLKNLTLKHSHMADKSFHELVSHFPLLEKLFLLECRTLHRITILSDKLKTLSLVRCHKLK 370

Query: 1085 TLVLDAPNLVDLKFVADFMPLSTTINTPSLLVAEIDLKRNNLECKPGYMSIDADKFGRDH 906
               +DAPNL+  ++    +P S ++N   L   ++ LK    +    ++    + F    
Sbjct: 371  EANIDAPNLLSFEYTGAELPFS-SMNASRLQEVKLHLKSQKQKSVQKFI----EGFDGKG 425

Query: 905  YMKYVRSQKEVDRETMLDPGLWVERY-YYKLESPDDFYQRELQLRSLLMKFMNAKELTLS 729
            +  ++ S++ V+    L  GL +  +  YK++        E  L S L  F + K L L 
Sbjct: 426  FKLFLASKQGVNIYEEL-RGLHLSYFGAYKIQLTKSARMVENLLNSHLRDF-HPKTLILK 483

Query: 728  IASAKQLLVHKEDMGWFRKSIPP 660
             +    LLV  ++    ++  PP
Sbjct: 484  TSLTSDLLVFIQEKILNKEKTPP 506


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