BLASTX nr result
ID: Cocculus22_contig00019235
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus22_contig00019235
(365 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002263764.1| PREDICTED: UPF0712 protein C7orf64 homolog [... 93 3e-17
emb|CAN63941.1| hypothetical protein VITISV_032503 [Vitis vinifera] 93 3e-17
ref|XP_002313579.1| hypothetical protein POPTR_0009s16880g [Popu... 91 2e-16
ref|XP_006483892.1| PREDICTED: RNA-binding protein 48-like isofo... 88 1e-15
ref|XP_006483891.1| PREDICTED: RNA-binding protein 48-like isofo... 88 1e-15
ref|XP_006438335.1| hypothetical protein CICLE_v10032655mg [Citr... 86 7e-15
ref|XP_002525357.1| nucleic acid binding protein, putative [Rici... 85 1e-14
ref|XP_004161064.1| PREDICTED: RNA-binding protein 48-like [Cucu... 82 6e-14
ref|XP_004142975.1| PREDICTED: RNA-binding protein 48-like [Cucu... 82 6e-14
ref|XP_007211983.1| hypothetical protein PRUPE_ppa010927mg [Prun... 80 2e-13
ref|XP_003616248.1| hypothetical protein MTR_5g077780 [Medicago ... 79 7e-13
ref|XP_003541147.1| PREDICTED: RNA-binding protein 48 isoform X1... 78 1e-12
gb|ACJ85604.1| unknown [Medicago truncatula] gi|388492174|gb|AFK... 78 1e-12
ref|XP_007044689.1| RNA-binding (RRM/RBD/RNP motifs) family prot... 77 2e-12
ref|XP_004509295.1| PREDICTED: RNA-binding protein 48-like [Cice... 77 2e-12
gb|AFK37542.1| unknown [Lotus japonicus] 77 2e-12
ref|XP_004490832.1| PREDICTED: RNA-binding protein 48-like isofo... 77 3e-12
ref|XP_004294413.1| PREDICTED: RNA-binding protein 48-like [Frag... 77 3e-12
ref|NP_001045616.1| Os02g0105000 [Oryza sativa Japonica Group] g... 77 3e-12
gb|EEC72303.1| hypothetical protein OsI_05486 [Oryza sativa Indi... 77 3e-12
>ref|XP_002263764.1| PREDICTED: UPF0712 protein C7orf64 homolog [Vitis vinifera]
gi|297739067|emb|CBI28556.3| unnamed protein product
[Vitis vinifera]
Length = 230
Score = 93.2 bits (230), Expect = 3e-17
Identities = 49/79 (62%), Positives = 58/79 (73%)
Frame = -2
Query: 364 ISEQASSKQKDSVESGHAYSNQNPPVIMVSSNQNYFSSPSMNNTVRLVREKLDKIESSSN 185
IS+Q S Q+ S ES H ++ + VSSNQ+YF SPSMN TVRLVREKLDKI+SSS
Sbjct: 152 ISKQMSFNQRISGESDHVSRIKDSSITTVSSNQDYFGSPSMNQTVRLVREKLDKIQSSSQ 211
Query: 184 NLQVAPASKKARVDNRRRI 128
+L+ PA KK RVDNRRRI
Sbjct: 212 HLEAGPAFKKTRVDNRRRI 230
>emb|CAN63941.1| hypothetical protein VITISV_032503 [Vitis vinifera]
Length = 230
Score = 93.2 bits (230), Expect = 3e-17
Identities = 49/79 (62%), Positives = 58/79 (73%)
Frame = -2
Query: 364 ISEQASSKQKDSVESGHAYSNQNPPVIMVSSNQNYFSSPSMNNTVRLVREKLDKIESSSN 185
IS+Q S Q+ S ES H ++ + VSSNQ+YF SPSMN TVRLVREKLDKI+SSS
Sbjct: 152 ISKQMSFNQRISGESDHVSRIKDSSITTVSSNQDYFGSPSMNQTVRLVREKLDKIQSSSQ 211
Query: 184 NLQVAPASKKARVDNRRRI 128
+L+ PA KK RVDNRRRI
Sbjct: 212 HLEAGPAFKKTRVDNRRRI 230
>ref|XP_002313579.1| hypothetical protein POPTR_0009s16880g [Populus trichocarpa]
gi|222849987|gb|EEE87534.1| hypothetical protein
POPTR_0009s16880g [Populus trichocarpa]
Length = 234
Score = 90.5 bits (223), Expect = 2e-16
Identities = 48/80 (60%), Positives = 60/80 (75%), Gaps = 1/80 (1%)
Frame = -2
Query: 364 ISEQASSKQK-DSVESGHAYSNQNPPVIMVSSNQNYFSSPSMNNTVRLVREKLDKIESSS 188
+S+ +S Q DS ES + + +PP+ VSS+Q+YF S SMN TVRLVREKL+KI+SSS
Sbjct: 155 VSQHLNSNQSWDSGESQNVHQIGDPPITRVSSDQDYFPSQSMNQTVRLVREKLNKIQSSS 214
Query: 187 NNLQVAPASKKARVDNRRRI 128
+LQ P SKKARVDNRRRI
Sbjct: 215 EHLQAGPVSKKARVDNRRRI 234
>ref|XP_006483892.1| PREDICTED: RNA-binding protein 48-like isoform X2 [Citrus sinensis]
Length = 188
Score = 87.8 bits (216), Expect = 1e-15
Identities = 46/79 (58%), Positives = 58/79 (73%)
Frame = -2
Query: 364 ISEQASSKQKDSVESGHAYSNQNPPVIMVSSNQNYFSSPSMNNTVRLVREKLDKIESSSN 185
+SEQ +S Q+ S ES P+ VSS+++YF+S SMN TVRLVREKL+KIESS+
Sbjct: 110 VSEQITSWQRASSESQRISHVNESPITRVSSDKDYFASQSMNQTVRLVREKLNKIESSTE 169
Query: 184 NLQVAPASKKARVDNRRRI 128
+LQ PASKK R+DNRRRI
Sbjct: 170 HLQARPASKKPRIDNRRRI 188
>ref|XP_006483891.1| PREDICTED: RNA-binding protein 48-like isoform X1 [Citrus sinensis]
Length = 230
Score = 87.8 bits (216), Expect = 1e-15
Identities = 46/79 (58%), Positives = 58/79 (73%)
Frame = -2
Query: 364 ISEQASSKQKDSVESGHAYSNQNPPVIMVSSNQNYFSSPSMNNTVRLVREKLDKIESSSN 185
+SEQ +S Q+ S ES P+ VSS+++YF+S SMN TVRLVREKL+KIESS+
Sbjct: 152 VSEQITSWQRASSESQRISHVNESPITRVSSDKDYFASQSMNQTVRLVREKLNKIESSTE 211
Query: 184 NLQVAPASKKARVDNRRRI 128
+LQ PASKK R+DNRRRI
Sbjct: 212 HLQARPASKKPRIDNRRRI 230
>ref|XP_006438335.1| hypothetical protein CICLE_v10032655mg [Citrus clementina]
gi|557540531|gb|ESR51575.1| hypothetical protein
CICLE_v10032655mg [Citrus clementina]
Length = 230
Score = 85.5 bits (210), Expect = 7e-15
Identities = 45/79 (56%), Positives = 57/79 (72%)
Frame = -2
Query: 364 ISEQASSKQKDSVESGHAYSNQNPPVIMVSSNQNYFSSPSMNNTVRLVREKLDKIESSSN 185
+SEQ +S Q+ ES P+ VSS+++YF+S SMN TVRLVREKL+KIESS+
Sbjct: 152 VSEQITSWQRAFSESQRISHVNESPITRVSSDKDYFASQSMNQTVRLVREKLNKIESSTE 211
Query: 184 NLQVAPASKKARVDNRRRI 128
+LQ PASKK R+DNRRRI
Sbjct: 212 HLQARPASKKPRIDNRRRI 230
>ref|XP_002525357.1| nucleic acid binding protein, putative [Ricinus communis]
gi|223535320|gb|EEF36995.1| nucleic acid binding
protein, putative [Ricinus communis]
Length = 216
Score = 84.7 bits (208), Expect = 1e-14
Identities = 46/70 (65%), Positives = 52/70 (74%), Gaps = 1/70 (1%)
Frame = -2
Query: 334 DSVESGHAYSNQN-PPVIMVSSNQNYFSSPSMNNTVRLVREKLDKIESSSNNLQVAPASK 158
+S S H S N PP+ VSSNQ YF S SMN TV LVREKL+KI+SSS +LQ PASK
Sbjct: 147 ESAGSQHNKSQINDPPITRVSSNQEYFPSQSMNQTVSLVREKLNKIQSSSEHLQAVPASK 206
Query: 157 KARVDNRRRI 128
K+RVDNRRRI
Sbjct: 207 KSRVDNRRRI 216
>ref|XP_004161064.1| PREDICTED: RNA-binding protein 48-like [Cucumis sativus]
Length = 258
Score = 82.4 bits (202), Expect = 6e-14
Identities = 48/78 (61%), Positives = 57/78 (73%), Gaps = 6/78 (7%)
Frame = -2
Query: 343 KQKDSVES---GHAYSNQNPPVIM---VSSNQNYFSSPSMNNTVRLVREKLDKIESSSNN 182
KQK+S+E G A NP V VSS+Q+YF+S SMN TV LVREKLDKI+SSS +
Sbjct: 181 KQKNSLEKRNYGDAALISNPHVSQITRVSSDQDYFASESMNQTVHLVREKLDKIQSSSEH 240
Query: 181 LQVAPASKKARVDNRRRI 128
LQ PASKK+R+DNRRRI
Sbjct: 241 LQAGPASKKSRMDNRRRI 258
>ref|XP_004142975.1| PREDICTED: RNA-binding protein 48-like [Cucumis sativus]
Length = 258
Score = 82.4 bits (202), Expect = 6e-14
Identities = 48/78 (61%), Positives = 57/78 (73%), Gaps = 6/78 (7%)
Frame = -2
Query: 343 KQKDSVES---GHAYSNQNPPVIM---VSSNQNYFSSPSMNNTVRLVREKLDKIESSSNN 182
KQK+S+E G A NP V VSS+Q+YF+S SMN TV LVREKLDKI+SSS +
Sbjct: 181 KQKNSLEKRNYGDAALISNPHVSQITRVSSDQDYFASESMNQTVHLVREKLDKIQSSSEH 240
Query: 181 LQVAPASKKARVDNRRRI 128
LQ PASKK+R+DNRRRI
Sbjct: 241 LQAGPASKKSRMDNRRRI 258
>ref|XP_007211983.1| hypothetical protein PRUPE_ppa010927mg [Prunus persica]
gi|462407848|gb|EMJ13182.1| hypothetical protein
PRUPE_ppa010927mg [Prunus persica]
Length = 230
Score = 80.5 bits (197), Expect = 2e-13
Identities = 43/79 (54%), Positives = 55/79 (69%)
Frame = -2
Query: 364 ISEQASSKQKDSVESGHAYSNQNPPVIMVSSNQNYFSSPSMNNTVRLVREKLDKIESSSN 185
I + +S Q+DS ES NPP+ +SS++ YF+S SMN T ++VREKL+KI+SSS
Sbjct: 152 IPQLVNSSQRDSGESQLTSHVNNPPLSRISSDKEYFASQSMNQTAQMVREKLNKIQSSSE 211
Query: 184 NLQVAPASKKARVDNRRRI 128
LQ ASKK RVDNRRRI
Sbjct: 212 YLQDGHASKKPRVDNRRRI 230
>ref|XP_003616248.1| hypothetical protein MTR_5g077780 [Medicago truncatula]
gi|355517583|gb|AES99206.1| hypothetical protein
MTR_5g077780 [Medicago truncatula]
Length = 222
Score = 79.0 bits (193), Expect = 7e-13
Identities = 40/60 (66%), Positives = 47/60 (78%)
Frame = -2
Query: 307 SNQNPPVIMVSSNQNYFSSPSMNNTVRLVREKLDKIESSSNNLQVAPASKKARVDNRRRI 128
+N N P VSSN++YFSS SMN TVR+VR+KLDKI+SS +LQ SKKARVDNRRRI
Sbjct: 163 NNSNLPKRTVSSNEDYFSSHSMNQTVRVVRDKLDKIQSSGEHLQAGSTSKKARVDNRRRI 222
>ref|XP_003541147.1| PREDICTED: RNA-binding protein 48 isoform X1 [Glycine max]
gi|571492118|ref|XP_006592132.1| PREDICTED: RNA-binding
protein 48 isoform X2 [Glycine max]
gi|571492120|ref|XP_006592133.1| PREDICTED: RNA-binding
protein 48 isoform X3 [Glycine max]
Length = 221
Score = 77.8 bits (190), Expect = 1e-12
Identities = 42/78 (53%), Positives = 54/78 (69%)
Frame = -2
Query: 361 SEQASSKQKDSVESGHAYSNQNPPVIMVSSNQNYFSSPSMNNTVRLVREKLDKIESSSNN 182
S+ S +D G ++S N P+ MVSSN++YF+S SMN TV LVR+KLDKI+SS N
Sbjct: 145 SQHLDSNARDVELKGGSHSG-NFPIRMVSSNEDYFASNSMNQTVSLVRDKLDKIQSSGEN 203
Query: 181 LQVAPASKKARVDNRRRI 128
+ ASKK RVDNR+RI
Sbjct: 204 TKAGSASKKQRVDNRKRI 221
>gb|ACJ85604.1| unknown [Medicago truncatula] gi|388492174|gb|AFK34153.1| unknown
[Medicago truncatula] gi|388516031|gb|AFK46077.1|
unknown [Medicago truncatula]
Length = 222
Score = 77.8 bits (190), Expect = 1e-12
Identities = 40/60 (66%), Positives = 46/60 (76%)
Frame = -2
Query: 307 SNQNPPVIMVSSNQNYFSSPSMNNTVRLVREKLDKIESSSNNLQVAPASKKARVDNRRRI 128
+N N P VSSN++YFSS SMN TVR+VR KLDKI+SS +LQ SKKARVDNRRRI
Sbjct: 163 NNSNLPKRTVSSNEDYFSSHSMNQTVRVVRAKLDKIQSSGEHLQAGSTSKKARVDNRRRI 222
>ref|XP_007044689.1| RNA-binding (RRM/RBD/RNP motifs) family protein [Theobroma cacao]
gi|508708624|gb|EOY00521.1| RNA-binding (RRM/RBD/RNP
motifs) family protein [Theobroma cacao]
Length = 228
Score = 77.4 bits (189), Expect = 2e-12
Identities = 40/79 (50%), Positives = 56/79 (70%)
Frame = -2
Query: 364 ISEQASSKQKDSVESGHAYSNQNPPVIMVSSNQNYFSSPSMNNTVRLVREKLDKIESSSN 185
I +Q +S +D +S + P+ VSS+++YF S SMN TV++VR+KL+KI+SS+
Sbjct: 150 IPKQINSGLRDVGDSEYKSHANIAPITRVSSDKDYFPSQSMNQTVKMVRDKLNKIQSSTE 209
Query: 184 NLQVAPASKKARVDNRRRI 128
+LQ PASKK RVDNRRRI
Sbjct: 210 HLQAEPASKKTRVDNRRRI 228
>ref|XP_004509295.1| PREDICTED: RNA-binding protein 48-like [Cicer arietinum]
Length = 231
Score = 77.4 bits (189), Expect = 2e-12
Identities = 45/80 (56%), Positives = 55/80 (68%), Gaps = 1/80 (1%)
Frame = -2
Query: 364 ISEQASSKQKDSVESGHAYSNQ-NPPVIMVSSNQNYFSSPSMNNTVRLVREKLDKIESSS 188
+SE + Q+++ A SN N P MVSSN++YF S SMN TVR VR+KLDKI+SS
Sbjct: 154 LSEHLNPNQRNA--EFEAKSNDGNLPKRMVSSNEDYFPSRSMNQTVRFVRDKLDKIQSSG 211
Query: 187 NNLQVAPASKKARVDNRRRI 128
+LQ SKKARVDNRRRI
Sbjct: 212 EHLQAGSTSKKARVDNRRRI 231
>gb|AFK37542.1| unknown [Lotus japonicus]
Length = 222
Score = 77.0 bits (188), Expect = 2e-12
Identities = 41/79 (51%), Positives = 55/79 (69%)
Frame = -2
Query: 364 ISEQASSKQKDSVESGHAYSNQNPPVIMVSSNQNYFSSPSMNNTVRLVREKLDKIESSSN 185
+SE ++D G ++ N N VSSN++YF+S SMN TV++VR+KLDKI+SS
Sbjct: 145 LSENLDHTERDLAFEGRSH-NGNLQKRTVSSNEDYFASHSMNQTVKVVRDKLDKIQSSGE 203
Query: 184 NLQVAPASKKARVDNRRRI 128
+LQ P SKK+RVDNRRRI
Sbjct: 204 HLQDGPVSKKSRVDNRRRI 222
>ref|XP_004490832.1| PREDICTED: RNA-binding protein 48-like isoform X1 [Cicer arietinum]
gi|502096807|ref|XP_004490833.1| PREDICTED: RNA-binding
protein 48-like isoform X2 [Cicer arietinum]
gi|502096810|ref|XP_004490834.1| PREDICTED: RNA-binding
protein 48-like isoform X3 [Cicer arietinum]
gi|502096813|ref|XP_004490835.1| PREDICTED: RNA-binding
protein 48-like isoform X4 [Cicer arietinum]
gi|502096816|ref|XP_004490836.1| PREDICTED: RNA-binding
protein 48-like isoform X5 [Cicer arietinum]
gi|502096820|ref|XP_004490837.1| PREDICTED: RNA-binding
protein 48-like isoform X6 [Cicer arietinum]
Length = 222
Score = 76.6 bits (187), Expect = 3e-12
Identities = 42/79 (53%), Positives = 54/79 (68%)
Frame = -2
Query: 364 ISEQASSKQKDSVESGHAYSNQNPPVIMVSSNQNYFSSPSMNNTVRLVREKLDKIESSSN 185
+SE + Q+++ + S N P MVSSN++YF S +MN TVR VR+KLDKI+SS
Sbjct: 145 LSEHLNPNQRNAEFEAKSNSG-NLPKRMVSSNEDYFPSRTMNQTVRFVRDKLDKIQSSGE 203
Query: 184 NLQVAPASKKARVDNRRRI 128
+LQ SKKARVDNRRRI
Sbjct: 204 HLQAGSTSKKARVDNRRRI 222
>ref|XP_004294413.1| PREDICTED: RNA-binding protein 48-like [Fragaria vesca subsp.
vesca]
Length = 230
Score = 76.6 bits (187), Expect = 3e-12
Identities = 40/71 (56%), Positives = 50/71 (70%)
Frame = -2
Query: 340 QKDSVESGHAYSNQNPPVIMVSSNQNYFSSPSMNNTVRLVREKLDKIESSSNNLQVAPAS 161
Q+D +S PP+ VSS + YF+SPSMN TV++VREKLDKI+SS+ +L S
Sbjct: 160 QRDYGQSQLTSRVNKPPITRVSSEKEYFASPSMNQTVQMVREKLDKIQSSTEHLLEEHKS 219
Query: 160 KKARVDNRRRI 128
KKARVDNRRRI
Sbjct: 220 KKARVDNRRRI 230
>ref|NP_001045616.1| Os02g0105000 [Oryza sativa Japonica Group]
gi|40363770|dbj|BAD06280.1| pentatricopeptide (PPR)
repeat-containing protein-like [Oryza sativa Japonica
Group] gi|41052548|dbj|BAD07540.1| pentatricopeptide
(PPR) repeat-containing protein-like [Oryza sativa
Japonica Group] gi|50252091|dbj|BAD28077.1|
pentatricopeptide (PPR) repeat-containing protein-like
[Oryza sativa Japonica Group]
gi|113535147|dbj|BAF07530.1| Os02g0105000 [Oryza sativa
Japonica Group] gi|215765601|dbj|BAG87298.1| unnamed
protein product [Oryza sativa Japonica Group]
gi|222622008|gb|EEE56140.1| hypothetical protein
OsJ_05020 [Oryza sativa Japonica Group]
Length = 220
Score = 76.6 bits (187), Expect = 3e-12
Identities = 41/76 (53%), Positives = 52/76 (68%)
Frame = -2
Query: 355 QASSKQKDSVESGHAYSNQNPPVIMVSSNQNYFSSPSMNNTVRLVREKLDKIESSSNNLQ 176
Q SS +++ ++ HA ++P VSSN++YF S SMN TV LVREKLDKI+SSS+N
Sbjct: 145 QMSSNKREYTKTLHASQFEDPRFTHVSSNKDYFPSESMNATVNLVREKLDKIQSSSDNSS 204
Query: 175 VAPASKKARVDNRRRI 128
A KK R DNRRRI
Sbjct: 205 AIVAPKKPRTDNRRRI 220
>gb|EEC72303.1| hypothetical protein OsI_05486 [Oryza sativa Indica Group]
Length = 220
Score = 76.6 bits (187), Expect = 3e-12
Identities = 41/76 (53%), Positives = 52/76 (68%)
Frame = -2
Query: 355 QASSKQKDSVESGHAYSNQNPPVIMVSSNQNYFSSPSMNNTVRLVREKLDKIESSSNNLQ 176
Q SS +++ ++ HA ++P VSSN++YF S SMN TV LVREKLDKI+SSS+N
Sbjct: 145 QMSSNKREYTKTLHASQFEDPRFTHVSSNKDYFPSESMNATVNLVREKLDKIQSSSDNSS 204
Query: 175 VAPASKKARVDNRRRI 128
A KK R DNRRRI
Sbjct: 205 AIVAPKKPRTDNRRRI 220