BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus22_contig00019164
         (748 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277955.1| PREDICTED: tRNA-dihydrouridine synthase A-li...   380   e-103
ref|XP_006838299.1| hypothetical protein AMTR_s00103p00116510 [A...   377   e-102
ref|XP_006439095.1| hypothetical protein CICLE_v10031578mg [Citr...   376   e-102
ref|XP_003633563.1| PREDICTED: tRNA-dihydrouridine synthase A-li...   374   e-101
emb|CBI24913.3| unnamed protein product [Vitis vinifera]              374   e-101
ref|XP_007052507.1| FMN-linked oxidoreductases superfamily prote...   374   e-101
ref|XP_004506326.1| PREDICTED: tRNA-dihydrouridine synthase A-li...   372   e-100
ref|XP_006439094.1| hypothetical protein CICLE_v10031578mg [Citr...   370   e-100
ref|XP_006345439.1| PREDICTED: tRNA-dihydrouridine(20a/20b) synt...   369   e-100
ref|XP_004306546.1| PREDICTED: tRNA-dihydrouridine synthase A-li...   369   e-100
ref|XP_004306547.1| PREDICTED: tRNA-dihydrouridine synthase A-li...   368   1e-99
ref|XP_007131391.1| hypothetical protein PHAVU_011G009800g [Phas...   367   2e-99
ref|XP_007052508.1| FMN-linked oxidoreductases superfamily prote...   367   2e-99
ref|XP_004229635.1| PREDICTED: tRNA-dihydrouridine synthase A-li...   367   2e-99
ref|XP_002298425.2| hypothetical protein POPTR_0001s27210g [Popu...   367   3e-99
ref|XP_003531118.1| PREDICTED: uncharacterized tRNA-dihydrouridi...   367   3e-99
ref|XP_004975107.1| PREDICTED: tRNA-dihydrouridine(47) synthase ...   365   1e-98
gb|EAY93387.1| hypothetical protein OsI_15183 [Oryza sativa Indi...   364   2e-98
ref|XP_002517816.1| tRNA-dihydrouridine synthase A, putative [Ri...   363   3e-98
ref|XP_003599260.1| tRNA-dihydrouridine synthase A [Medicago tru...   363   4e-98

>ref|XP_002277955.1| PREDICTED: tRNA-dihydrouridine synthase A-like isoform 1 [Vitis
           vinifera]
          Length = 433

 Score =  380 bits (976), Expect = e-103
 Identities = 189/257 (73%), Positives = 208/257 (80%), Gaps = 11/257 (4%)
 Frame = +3

Query: 9   ASLPPIYYCCSVKKHHRRSFNRFYCHSVECNS------KH-----VESAERRYLPPWFSV 155
           AS  PI+    +K H R S N  Y +S +  +      KH     V     +YLPPWFSV
Sbjct: 11  ASFNPIHSII-LKNHRRLSLNILYGNSAKSKNSTAYIRKHQLHTKVVMVAGQYLPPWFSV 69

Query: 156 APMMDWTDNHYRTLARLISKHAWLYTEMVVAETIVHQEGNLDRFLSFPPEQHPIILQIGG 335
           APMMDWT+NHYRTLARLISKHAWLYTEM+ AETIV+QE NLDRFL F P+QHPI+LQIGG
Sbjct: 70  APMMDWTNNHYRTLARLISKHAWLYTEMIAAETIVYQEKNLDRFLEFSPDQHPIVLQIGG 129

Query: 336 SNLENLAKAAGLANFYNYDAINLNCGCPSGKVAGHGCFGARLMLNPKFVAEAMSAIAENC 515
           +NL+N+AKA  LAN Y YD INLNCGCPS KVAGHGCFG RLML+PKFVAEAMS IA N 
Sbjct: 130 NNLDNIAKATELANSYCYDEINLNCGCPSPKVAGHGCFGVRLMLDPKFVAEAMSVIAANS 189

Query: 516 DAPVSVKCRIGVDNHDSYNELCDFIYKVASGSPTRHFIIHARKALLNGISPAANRKIPPL 695
           D PVSVKCRIGVD+HDSYNELCDFIYKV+S SPTRHFIIH+RKALLNGISPA NRKIPPL
Sbjct: 190 DVPVSVKCRIGVDDHDSYNELCDFIYKVSSQSPTRHFIIHSRKALLNGISPADNRKIPPL 249

Query: 696 KYEYYFGLLRDFPDLQF 746
           KYEYYFGLLRDFPDL+F
Sbjct: 250 KYEYYFGLLRDFPDLRF 266


>ref|XP_006838299.1| hypothetical protein AMTR_s00103p00116510 [Amborella trichopoda]
           gi|548840767|gb|ERN00868.1| hypothetical protein
           AMTR_s00103p00116510 [Amborella trichopoda]
          Length = 421

 Score =  377 bits (967), Expect = e-102
 Identities = 177/233 (75%), Positives = 198/233 (84%)
 Frame = +3

Query: 48  KHHRRSFNRFYCHSVECNSKHVESAERRYLPPWFSVAPMMDWTDNHYRTLARLISKHAWL 227
           K HRRS+      S++     +    R+YLPPWFSVAPMMDWTDNHYRTLARLISKHAWL
Sbjct: 22  KRHRRSYIMLNWKSLKHGISSISG--RKYLPPWFSVAPMMDWTDNHYRTLARLISKHAWL 79

Query: 228 YTEMVVAETIVHQEGNLDRFLSFPPEQHPIILQIGGSNLENLAKAAGLANFYNYDAINLN 407
           YTEM+VAETIVHQ+ NLDRFL+F P QHPI+LQIGGSNLENLAKA  LAN Y+YD INLN
Sbjct: 80  YTEMIVAETIVHQKENLDRFLAFSPSQHPIVLQIGGSNLENLAKATELANSYSYDEINLN 139

Query: 408 CGCPSGKVAGHGCFGARLMLNPKFVAEAMSAIAENCDAPVSVKCRIGVDNHDSYNELCDF 587
           CGCPSGKVAGHGCFG +LM NPKFV EAMSAIA NC  PVSVKCRIGVD+ D+Y+ELCDF
Sbjct: 140 CGCPSGKVAGHGCFGVQLMYNPKFVGEAMSAIAANCSVPVSVKCRIGVDDRDTYDELCDF 199

Query: 588 IYKVASGSPTRHFIIHARKALLNGISPAANRKIPPLKYEYYFGLLRDFPDLQF 746
           +Y VA+ SPTRHFIIH+RKALL G+SPA NR +PPLKYEY+FGLLRDFP+LQF
Sbjct: 200 VYTVATHSPTRHFIIHSRKALLKGLSPAENRTVPPLKYEYFFGLLRDFPELQF 252


>ref|XP_006439095.1| hypothetical protein CICLE_v10031578mg [Citrus clementina]
           gi|567893151|ref|XP_006439096.1| hypothetical protein
           CICLE_v10031578mg [Citrus clementina]
           gi|567893155|ref|XP_006439098.1| hypothetical protein
           CICLE_v10031578mg [Citrus clementina]
           gi|568858647|ref|XP_006482859.1| PREDICTED:
           tRNA-dihydrouridine(47) synthase [NAD(P)(+)]-like
           isoform X1 [Citrus sinensis]
           gi|568858649|ref|XP_006482860.1| PREDICTED:
           tRNA-dihydrouridine(47) synthase [NAD(P)(+)]-like
           isoform X2 [Citrus sinensis]
           gi|568858651|ref|XP_006482861.1| PREDICTED:
           tRNA-dihydrouridine(47) synthase [NAD(P)(+)]-like
           isoform X3 [Citrus sinensis] gi|557541291|gb|ESR52335.1|
           hypothetical protein CICLE_v10031578mg [Citrus
           clementina] gi|557541292|gb|ESR52336.1| hypothetical
           protein CICLE_v10031578mg [Citrus clementina]
           gi|557541294|gb|ESR52338.1| hypothetical protein
           CICLE_v10031578mg [Citrus clementina]
          Length = 436

 Score =  376 bits (966), Expect = e-102
 Identities = 182/246 (73%), Positives = 200/246 (81%), Gaps = 11/246 (4%)
 Frame = +3

Query: 42  VKKHHRRSFNRFYCHSVECNS-----------KHVESAERRYLPPWFSVAPMMDWTDNHY 188
           +KKH R S N F+ +S    S              E    +YLPPWFSVAPMMDWTDNHY
Sbjct: 25  LKKHRRFSVNSFFKNSNNPRSLSTCTQNIILHTKAEMVASQYLPPWFSVAPMMDWTDNHY 84

Query: 189 RTLARLISKHAWLYTEMVVAETIVHQEGNLDRFLSFPPEQHPIILQIGGSNLENLAKAAG 368
           RTLARLISKHAWLYTEM+ AETI++Q+GNLDRFL+F PEQHPI+LQIGGSNL+NLAKA  
Sbjct: 85  RTLARLISKHAWLYTEMLAAETIIYQQGNLDRFLAFSPEQHPIVLQIGGSNLDNLAKATE 144

Query: 369 LANFYNYDAINLNCGCPSGKVAGHGCFGARLMLNPKFVAEAMSAIAENCDAPVSVKCRIG 548
           LAN YNYD INLNCGCPS KVAGHGCFG  LML+PKFV EAMS IA N + PVSVKCRIG
Sbjct: 145 LANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANTNVPVSVKCRIG 204

Query: 549 VDNHDSYNELCDFIYKVASGSPTRHFIIHARKALLNGISPAANRKIPPLKYEYYFGLLRD 728
           VD+HDSYN+LCDFIYKV+S SPTRHFIIH+RKALLNGISPA NR IPPLKYEYY+ LLRD
Sbjct: 205 VDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRD 264

Query: 729 FPDLQF 746
           FPDL F
Sbjct: 265 FPDLTF 270


>ref|XP_003633563.1| PREDICTED: tRNA-dihydrouridine synthase A-like isoform 2 [Vitis
           vinifera]
          Length = 377

 Score =  374 bits (961), Expect = e-101
 Identities = 175/206 (84%), Positives = 189/206 (91%)
 Frame = +3

Query: 129 RYLPPWFSVAPMMDWTDNHYRTLARLISKHAWLYTEMVVAETIVHQEGNLDRFLSFPPEQ 308
           +YLPPWFSVAPMMDWT+NHYRTLARLISKHAWLYTEM+ AETIV+QE NLDRFL F P+Q
Sbjct: 5   QYLPPWFSVAPMMDWTNNHYRTLARLISKHAWLYTEMIAAETIVYQEKNLDRFLEFSPDQ 64

Query: 309 HPIILQIGGSNLENLAKAAGLANFYNYDAINLNCGCPSGKVAGHGCFGARLMLNPKFVAE 488
           HPI+LQIGG+NL+N+AKA  LAN Y YD INLNCGCPS KVAGHGCFG RLML+PKFVAE
Sbjct: 65  HPIVLQIGGNNLDNIAKATELANSYCYDEINLNCGCPSPKVAGHGCFGVRLMLDPKFVAE 124

Query: 489 AMSAIAENCDAPVSVKCRIGVDNHDSYNELCDFIYKVASGSPTRHFIIHARKALLNGISP 668
           AMS IA N D PVSVKCRIGVD+HDSYNELCDFIYKV+S SPTRHFIIH+RKALLNGISP
Sbjct: 125 AMSVIAANSDVPVSVKCRIGVDDHDSYNELCDFIYKVSSQSPTRHFIIHSRKALLNGISP 184

Query: 669 AANRKIPPLKYEYYFGLLRDFPDLQF 746
           A NRKIPPLKYEYYFGLLRDFPDL+F
Sbjct: 185 ADNRKIPPLKYEYYFGLLRDFPDLRF 210


>emb|CBI24913.3| unnamed protein product [Vitis vinifera]
          Length = 423

 Score =  374 bits (961), Expect = e-101
 Identities = 175/206 (84%), Positives = 189/206 (91%)
 Frame = +3

Query: 129 RYLPPWFSVAPMMDWTDNHYRTLARLISKHAWLYTEMVVAETIVHQEGNLDRFLSFPPEQ 308
           +YLPPWFSVAPMMDWT+NHYRTLARLISKHAWLYTEM+ AETIV+QE NLDRFL F P+Q
Sbjct: 51  QYLPPWFSVAPMMDWTNNHYRTLARLISKHAWLYTEMIAAETIVYQEKNLDRFLEFSPDQ 110

Query: 309 HPIILQIGGSNLENLAKAAGLANFYNYDAINLNCGCPSGKVAGHGCFGARLMLNPKFVAE 488
           HPI+LQIGG+NL+N+AKA  LAN Y YD INLNCGCPS KVAGHGCFG RLML+PKFVAE
Sbjct: 111 HPIVLQIGGNNLDNIAKATELANSYCYDEINLNCGCPSPKVAGHGCFGVRLMLDPKFVAE 170

Query: 489 AMSAIAENCDAPVSVKCRIGVDNHDSYNELCDFIYKVASGSPTRHFIIHARKALLNGISP 668
           AMS IA N D PVSVKCRIGVD+HDSYNELCDFIYKV+S SPTRHFIIH+RKALLNGISP
Sbjct: 171 AMSVIAANSDVPVSVKCRIGVDDHDSYNELCDFIYKVSSQSPTRHFIIHSRKALLNGISP 230

Query: 669 AANRKIPPLKYEYYFGLLRDFPDLQF 746
           A NRKIPPLKYEYYFGLLRDFPDL+F
Sbjct: 231 ADNRKIPPLKYEYYFGLLRDFPDLRF 256


>ref|XP_007052507.1| FMN-linked oxidoreductases superfamily protein isoform 1 [Theobroma
           cacao] gi|508704768|gb|EOX96664.1| FMN-linked
           oxidoreductases superfamily protein isoform 1 [Theobroma
           cacao]
          Length = 436

 Score =  374 bits (959), Expect = e-101
 Identities = 183/258 (70%), Positives = 212/258 (82%), Gaps = 11/258 (4%)
 Frame = +3

Query: 6   LASLPPIYYCCSVKKHHRRSFNRFYCHSVECN--SKHVESAE---------RRYLPPWFS 152
           ++S  P++   ++K H R S N  Y +S +    S + ++A+         RRYLPP FS
Sbjct: 11  ISSFTPLH-SVTLKNHRRFSINIPYNYSTKARTISSYTQNAQIHTEDAMVARRYLPPLFS 69

Query: 153 VAPMMDWTDNHYRTLARLISKHAWLYTEMVVAETIVHQEGNLDRFLSFPPEQHPIILQIG 332
           VAPMM+WTDNHYRTLARLISKHAWLYTEM+ AETIV+Q+GNLDRFL++ PEQHPI+LQIG
Sbjct: 70  VAPMMEWTDNHYRTLARLISKHAWLYTEMLAAETIVYQKGNLDRFLAYSPEQHPIVLQIG 129

Query: 333 GSNLENLAKAAGLANFYNYDAINLNCGCPSGKVAGHGCFGARLMLNPKFVAEAMSAIAEN 512
           G+NLENLAKA  LAN Y+YD IN NCGCPS KVAGHGCFG RLML+PKFV EAMS IA N
Sbjct: 130 GNNLENLAKATELANAYHYDEINFNCGCPSPKVAGHGCFGVRLMLDPKFVGEAMSVIAAN 189

Query: 513 CDAPVSVKCRIGVDNHDSYNELCDFIYKVASGSPTRHFIIHARKALLNGISPAANRKIPP 692
            + PVSVKCRIGVD+HDSYNELCDFIYKV+S SPTRHFIIH+RKALLNGISPA NR+IPP
Sbjct: 190 TNVPVSVKCRIGVDDHDSYNELCDFIYKVSSLSPTRHFIIHSRKALLNGISPADNRRIPP 249

Query: 693 LKYEYYFGLLRDFPDLQF 746
           LKYEYY+ LLRDFPDL+F
Sbjct: 250 LKYEYYYALLRDFPDLKF 267


>ref|XP_004506326.1| PREDICTED: tRNA-dihydrouridine synthase A-like isoform X2 [Cicer
           arietinum]
          Length = 431

 Score =  372 bits (954), Expect = e-100
 Identities = 179/238 (75%), Positives = 203/238 (85%), Gaps = 2/238 (0%)
 Frame = +3

Query: 39  SVKKHHRRSF--NRFYCHSVECNSKHVESAERRYLPPWFSVAPMMDWTDNHYRTLARLIS 212
           S+ + +RR+   +RF+    E   KH   A + YLPPWFSVAPMMDWTDNHYRTLARLIS
Sbjct: 31  SIFRRNRRNLRSSRFFSVKQEAYDKHGVVA-KHYLPPWFSVAPMMDWTDNHYRTLARLIS 89

Query: 213 KHAWLYTEMVVAETIVHQEGNLDRFLSFPPEQHPIILQIGGSNLENLAKAAGLANFYNYD 392
           KHAWLYTEM+ AETIVHQ+ NLDRFL++ PEQHPI+LQIGG N+ENLAKA  LAN Y YD
Sbjct: 90  KHAWLYTEMLAAETIVHQKDNLDRFLAYSPEQHPIVLQIGGGNVENLAKATELANAYCYD 149

Query: 393 AINLNCGCPSGKVAGHGCFGARLMLNPKFVAEAMSAIAENCDAPVSVKCRIGVDNHDSYN 572
            INLNCGCPS +VAGHGCFG RLML+PKFVAEAMSAIA N + PVSVKCRIGVD+HDSY+
Sbjct: 150 EINLNCGCPSPRVAGHGCFGVRLMLDPKFVAEAMSAIAANTNVPVSVKCRIGVDDHDSYD 209

Query: 573 ELCDFIYKVASGSPTRHFIIHARKALLNGISPAANRKIPPLKYEYYFGLLRDFPDLQF 746
           ELCDFI+KV+S SPT+HFIIH+RKALLNGISPA NR IPPLKYEY++GLLRDFPDL F
Sbjct: 210 ELCDFIFKVSSLSPTKHFIIHSRKALLNGISPAENRSIPPLKYEYFYGLLRDFPDLTF 267


>ref|XP_006439094.1| hypothetical protein CICLE_v10031578mg [Citrus clementina]
           gi|568858653|ref|XP_006482862.1| PREDICTED:
           tRNA-dihydrouridine(47) synthase [NAD(P)(+)]-like
           isoform X4 [Citrus sinensis]
           gi|568858655|ref|XP_006482863.1| PREDICTED:
           tRNA-dihydrouridine(47) synthase [NAD(P)(+)]-like
           isoform X5 [Citrus sinensis] gi|557541290|gb|ESR52334.1|
           hypothetical protein CICLE_v10031578mg [Citrus
           clementina]
          Length = 376

 Score =  370 bits (950), Expect = e-100
 Identities = 172/206 (83%), Positives = 187/206 (90%)
 Frame = +3

Query: 129 RYLPPWFSVAPMMDWTDNHYRTLARLISKHAWLYTEMVVAETIVHQEGNLDRFLSFPPEQ 308
           +YLPPWFSVAPMMDWTDNHYRTLARLISKHAWLYTEM+ AETI++Q+GNLDRFL+F PEQ
Sbjct: 5   QYLPPWFSVAPMMDWTDNHYRTLARLISKHAWLYTEMLAAETIIYQQGNLDRFLAFSPEQ 64

Query: 309 HPIILQIGGSNLENLAKAAGLANFYNYDAINLNCGCPSGKVAGHGCFGARLMLNPKFVAE 488
           HPI+LQIGGSNL+NLAKA  LAN YNYD INLNCGCPS KVAGHGCFG  LML+PKFV E
Sbjct: 65  HPIVLQIGGSNLDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGE 124

Query: 489 AMSAIAENCDAPVSVKCRIGVDNHDSYNELCDFIYKVASGSPTRHFIIHARKALLNGISP 668
           AMS IA N + PVSVKCRIGVD+HDSYN+LCDFIYKV+S SPTRHFIIH+RKALLNGISP
Sbjct: 125 AMSVIAANTNVPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISP 184

Query: 669 AANRKIPPLKYEYYFGLLRDFPDLQF 746
           A NR IPPLKYEYY+ LLRDFPDL F
Sbjct: 185 AENRTIPPLKYEYYYALLRDFPDLTF 210


>ref|XP_006345439.1| PREDICTED: tRNA-dihydrouridine(20a/20b) synthase [NAD(P)+]-like
           [Solanum tuberosum]
          Length = 427

 Score =  369 bits (947), Expect = e-100
 Identities = 190/258 (73%), Positives = 208/258 (80%), Gaps = 11/258 (4%)
 Frame = +3

Query: 6   LASLPPIYYCCSVKKHHRRSFNRFYCHSVE----C----NSK-HVES--AERRYLPPWFS 152
           +AS+ P +   SV +  R S N FY  S +    C    NSK H  S  A  RY PPWFS
Sbjct: 9   IASITPFH---SVIRFGRFSSNLFYGSSSKPRTLCAYHQNSKLHSASLMAAERYPPPWFS 65

Query: 153 VAPMMDWTDNHYRTLARLISKHAWLYTEMVVAETIVHQEGNLDRFLSFPPEQHPIILQIG 332
           VAPMMDWTDNHYRTLARLISK AWLYTEM+ AETIV+Q GNLDRFL++ PEQHPI+LQIG
Sbjct: 66  VAPMMDWTDNHYRTLARLISKKAWLYTEMIAAETIVYQTGNLDRFLAYGPEQHPIVLQIG 125

Query: 333 GSNLENLAKAAGLANFYNYDAINLNCGCPSGKVAGHGCFGARLMLNPKFVAEAMSAIAEN 512
           G+ LENLAKA  LA  Y YD INLNCGCPS KVAGHGCFG RLML+PKFVAEAMS IA N
Sbjct: 126 GNKLENLAKATQLATPYGYDEINLNCGCPSPKVAGHGCFGVRLMLDPKFVAEAMSVIAAN 185

Query: 513 CDAPVSVKCRIGVDNHDSYNELCDFIYKVASGSPTRHFIIHARKALLNGISPAANRKIPP 692
            + PVSVKCRIGVD+HDSYNELCDFIY+V+S SPTRHFIIH+RKALLNGISPA NRKIPP
Sbjct: 186 TNVPVSVKCRIGVDDHDSYNELCDFIYEVSSQSPTRHFIIHSRKALLNGISPADNRKIPP 245

Query: 693 LKYEYYFGLLRDFPDLQF 746
           LKYEYY+ LLRDFPDLQF
Sbjct: 246 LKYEYYYALLRDFPDLQF 263


>ref|XP_004306546.1| PREDICTED: tRNA-dihydrouridine synthase A-like isoform 1 [Fragaria
           vesca subsp. vesca]
          Length = 424

 Score =  369 bits (947), Expect = e-100
 Identities = 179/241 (74%), Positives = 197/241 (81%), Gaps = 6/241 (2%)
 Frame = +3

Query: 42  VKKHHRRSFNRFYCHSVECNSKHVESAERR------YLPPWFSVAPMMDWTDNHYRTLAR 203
           ++   R SFN F   S     +       R      YLPP+FSVAPMM+WTD HYRT+AR
Sbjct: 20  LQTRRRFSFNIFQASSSSSAHRRPAMVSARNYTHAHYLPPYFSVAPMMEWTDVHYRTMAR 79

Query: 204 LISKHAWLYTEMVVAETIVHQEGNLDRFLSFPPEQHPIILQIGGSNLENLAKAAGLANFY 383
           LISKHAWLYTEM+ AETIV+Q+ NLDRFL FPPEQHPI+LQIGGSNLENLAKA  LAN Y
Sbjct: 80  LISKHAWLYTEMLAAETIVYQKDNLDRFLYFPPEQHPIVLQIGGSNLENLAKATQLANIY 139

Query: 384 NYDAINLNCGCPSGKVAGHGCFGARLMLNPKFVAEAMSAIAENCDAPVSVKCRIGVDNHD 563
            YD IN NCGCPS +VAGHGCFGARLML+PKFVAEAMS IA N D PVSVKCRIGVD+HD
Sbjct: 140 KYDEINFNCGCPSPRVAGHGCFGARLMLDPKFVAEAMSVIAANTDVPVSVKCRIGVDDHD 199

Query: 564 SYNELCDFIYKVASGSPTRHFIIHARKALLNGISPAANRKIPPLKYEYYFGLLRDFPDLQ 743
           SYNELCDFIYKV+S SPTRHFIIH+RKALLNGISPA NR IPPLKYEY++GLLRDFPDL+
Sbjct: 200 SYNELCDFIYKVSSQSPTRHFIIHSRKALLNGISPAENRSIPPLKYEYFYGLLRDFPDLR 259

Query: 744 F 746
           F
Sbjct: 260 F 260


>ref|XP_004306547.1| PREDICTED: tRNA-dihydrouridine synthase A-like isoform 2 [Fragaria
           vesca subsp. vesca]
          Length = 380

 Score =  368 bits (944), Expect = 1e-99
 Identities = 172/205 (83%), Positives = 187/205 (91%)
 Frame = +3

Query: 132 YLPPWFSVAPMMDWTDNHYRTLARLISKHAWLYTEMVVAETIVHQEGNLDRFLSFPPEQH 311
           YLPP+FSVAPMM+WTD HYRT+ARLISKHAWLYTEM+ AETIV+Q+ NLDRFL FPPEQH
Sbjct: 12  YLPPYFSVAPMMEWTDVHYRTMARLISKHAWLYTEMLAAETIVYQKDNLDRFLYFPPEQH 71

Query: 312 PIILQIGGSNLENLAKAAGLANFYNYDAINLNCGCPSGKVAGHGCFGARLMLNPKFVAEA 491
           PI+LQIGGSNLENLAKA  LAN Y YD IN NCGCPS +VAGHGCFGARLML+PKFVAEA
Sbjct: 72  PIVLQIGGSNLENLAKATQLANIYKYDEINFNCGCPSPRVAGHGCFGARLMLDPKFVAEA 131

Query: 492 MSAIAENCDAPVSVKCRIGVDNHDSYNELCDFIYKVASGSPTRHFIIHARKALLNGISPA 671
           MS IA N D PVSVKCRIGVD+HDSYNELCDFIYKV+S SPTRHFIIH+RKALLNGISPA
Sbjct: 132 MSVIAANTDVPVSVKCRIGVDDHDSYNELCDFIYKVSSQSPTRHFIIHSRKALLNGISPA 191

Query: 672 ANRKIPPLKYEYYFGLLRDFPDLQF 746
            NR IPPLKYEY++GLLRDFPDL+F
Sbjct: 192 ENRSIPPLKYEYFYGLLRDFPDLRF 216


>ref|XP_007131391.1| hypothetical protein PHAVU_011G009800g [Phaseolus vulgaris]
           gi|561004391|gb|ESW03385.1| hypothetical protein
           PHAVU_011G009800g [Phaseolus vulgaris]
          Length = 431

 Score =  367 bits (943), Expect = 2e-99
 Identities = 175/236 (74%), Positives = 199/236 (84%), Gaps = 1/236 (0%)
 Frame = +3

Query: 42  VKKHHRRSFNRFYCHSVECNSKHVESA-ERRYLPPWFSVAPMMDWTDNHYRTLARLISKH 218
           + + ++ S   F  H+++        A  R YLPPWFSVAPMM+WTDNHYRTLARLISKH
Sbjct: 31  ISRRNKFSCRLFSTHALKAQLHDKPGAVSRYYLPPWFSVAPMMEWTDNHYRTLARLISKH 90

Query: 219 AWLYTEMVVAETIVHQEGNLDRFLSFPPEQHPIILQIGGSNLENLAKAAGLANFYNYDAI 398
           AWLYTEMV AETIVHQ+ NLDRFL++ P+QHPI+LQIGGSN++NLAKA  LAN Y YD I
Sbjct: 91  AWLYTEMVAAETIVHQKDNLDRFLAYSPDQHPIVLQIGGSNIKNLAKATELANAYCYDEI 150

Query: 399 NLNCGCPSGKVAGHGCFGARLMLNPKFVAEAMSAIAENCDAPVSVKCRIGVDNHDSYNEL 578
           NLNCGCPS KVAGHGCFG  LMLNPKFVAEAMSAIA + + PVSVKCRIGVD+HDSYNEL
Sbjct: 151 NLNCGCPSPKVAGHGCFGVSLMLNPKFVAEAMSAIAASTNVPVSVKCRIGVDDHDSYNEL 210

Query: 579 CDFIYKVASGSPTRHFIIHARKALLNGISPAANRKIPPLKYEYYFGLLRDFPDLQF 746
           CDFIY+V+S SPT+HFIIH+RKALLNGISPA NR IPPLKYEY++GLLRDFPDL F
Sbjct: 211 CDFIYQVSSLSPTKHFIIHSRKALLNGISPAENRSIPPLKYEYFYGLLRDFPDLTF 266


>ref|XP_007052508.1| FMN-linked oxidoreductases superfamily protein isoform 2 [Theobroma
           cacao] gi|590724580|ref|XP_007052509.1| FMN-linked
           oxidoreductases superfamily protein isoform 2 [Theobroma
           cacao] gi|508704769|gb|EOX96665.1| FMN-linked
           oxidoreductases superfamily protein isoform 2 [Theobroma
           cacao] gi|508704770|gb|EOX96666.1| FMN-linked
           oxidoreductases superfamily protein isoform 2 [Theobroma
           cacao]
          Length = 375

 Score =  367 bits (943), Expect = 2e-99
 Identities = 172/207 (83%), Positives = 189/207 (91%)
 Frame = +3

Query: 126 RRYLPPWFSVAPMMDWTDNHYRTLARLISKHAWLYTEMVVAETIVHQEGNLDRFLSFPPE 305
           RRYLPP FSVAPMM+WTDNHYRTLARLISKHAWLYTEM+ AETIV+Q+GNLDRFL++ PE
Sbjct: 4   RRYLPPLFSVAPMMEWTDNHYRTLARLISKHAWLYTEMLAAETIVYQKGNLDRFLAYSPE 63

Query: 306 QHPIILQIGGSNLENLAKAAGLANFYNYDAINLNCGCPSGKVAGHGCFGARLMLNPKFVA 485
           QHPI+LQIGG+NLENLAKA  LAN Y+YD IN NCGCPS KVAGHGCFG RLML+PKFV 
Sbjct: 64  QHPIVLQIGGNNLENLAKATELANAYHYDEINFNCGCPSPKVAGHGCFGVRLMLDPKFVG 123

Query: 486 EAMSAIAENCDAPVSVKCRIGVDNHDSYNELCDFIYKVASGSPTRHFIIHARKALLNGIS 665
           EAMS IA N + PVSVKCRIGVD+HDSYNELCDFIYKV+S SPTRHFIIH+RKALLNGIS
Sbjct: 124 EAMSVIAANTNVPVSVKCRIGVDDHDSYNELCDFIYKVSSLSPTRHFIIHSRKALLNGIS 183

Query: 666 PAANRKIPPLKYEYYFGLLRDFPDLQF 746
           PA NR+IPPLKYEYY+ LLRDFPDL+F
Sbjct: 184 PADNRRIPPLKYEYYYALLRDFPDLKF 210


>ref|XP_004229635.1| PREDICTED: tRNA-dihydrouridine synthase A-like [Solanum
           lycopersicum]
          Length = 439

 Score =  367 bits (942), Expect = 2e-99
 Identities = 189/258 (73%), Positives = 208/258 (80%), Gaps = 11/258 (4%)
 Frame = +3

Query: 6   LASLPPIYYCCSVKKHHRRSFNRFYCHSVE----C----NSK-HVES--AERRYLPPWFS 152
           +AS+ P +   SV +  R S N FY  S +    C    NSK H  S  A  R+ PPWFS
Sbjct: 21  IASITPFH---SVIRFGRFSSNLFYGSSSKQRTLCAYHQNSKLHSASLMAAERHPPPWFS 77

Query: 153 VAPMMDWTDNHYRTLARLISKHAWLYTEMVVAETIVHQEGNLDRFLSFPPEQHPIILQIG 332
           VAPMMDWTDNHYRTLARLISK AWLYTEM+ AETIV+Q GNLDRFL++ PEQHPI+LQIG
Sbjct: 78  VAPMMDWTDNHYRTLARLISKKAWLYTEMIAAETIVYQTGNLDRFLAYGPEQHPIVLQIG 137

Query: 333 GSNLENLAKAAGLANFYNYDAINLNCGCPSGKVAGHGCFGARLMLNPKFVAEAMSAIAEN 512
           G+ LENLAKA  LA  Y YD INLNCGCPS KVAGHGCFG RLML+PKFVAEAMS IA N
Sbjct: 138 GNKLENLAKATQLATPYGYDEINLNCGCPSPKVAGHGCFGVRLMLDPKFVAEAMSVIAAN 197

Query: 513 CDAPVSVKCRIGVDNHDSYNELCDFIYKVASGSPTRHFIIHARKALLNGISPAANRKIPP 692
            + PVSVKCRIGVD+HDSYNELCDFIY+V+S SPTRHFIIH+RKALLNGISPA NRKIPP
Sbjct: 198 TNVPVSVKCRIGVDDHDSYNELCDFIYEVSSHSPTRHFIIHSRKALLNGISPADNRKIPP 257

Query: 693 LKYEYYFGLLRDFPDLQF 746
           LKYEYY+ LLRDFPDLQF
Sbjct: 258 LKYEYYYALLRDFPDLQF 275


>ref|XP_002298425.2| hypothetical protein POPTR_0001s27210g [Populus trichocarpa]
           gi|550348297|gb|EEE83230.2| hypothetical protein
           POPTR_0001s27210g [Populus trichocarpa]
          Length = 493

 Score =  367 bits (941), Expect = 3e-99
 Identities = 170/221 (76%), Positives = 191/221 (86%)
 Frame = +3

Query: 84  HSVECNSKHVESAERRYLPPWFSVAPMMDWTDNHYRTLARLISKHAWLYTEMVVAETIVH 263
           H +     H E    +Y PP FSVAPMMDWTDNHYRT+AR+ISKHAWLYTEM+ AETIVH
Sbjct: 105 HQLRNIKTHTEMGVEQYRPPLFSVAPMMDWTDNHYRTVARIISKHAWLYTEMLAAETIVH 164

Query: 264 QEGNLDRFLSFPPEQHPIILQIGGSNLENLAKAAGLANFYNYDAINLNCGCPSGKVAGHG 443
           Q+G+LDRFL+F PEQHPI+LQIGG+NL+N+AKA  LAN Y YD INLNCGCPS KVAGHG
Sbjct: 165 QQGDLDRFLAFSPEQHPIVLQIGGNNLDNIAKATRLANSYGYDEINLNCGCPSPKVAGHG 224

Query: 444 CFGARLMLNPKFVAEAMSAIAENCDAPVSVKCRIGVDNHDSYNELCDFIYKVASGSPTRH 623
           CFG RLML+PKFV EAMS IA N D PVSVKCRIG+D+HDSYNELCDFIYKV+S SPT+H
Sbjct: 225 CFGVRLMLDPKFVGEAMSVIAANTDVPVSVKCRIGLDDHDSYNELCDFIYKVSSLSPTKH 284

Query: 624 FIIHARKALLNGISPAANRKIPPLKYEYYFGLLRDFPDLQF 746
           FIIH+RKALLNGISPA NR+IPPLKYEYY+ LLRDFPDL+F
Sbjct: 285 FIIHSRKALLNGISPADNRRIPPLKYEYYYALLRDFPDLRF 325


>ref|XP_003531118.1| PREDICTED: uncharacterized tRNA-dihydrouridine synthase-like
           protein C45G9.2-like [Glycine max]
          Length = 430

 Score =  367 bits (941), Expect = 3e-99
 Identities = 175/240 (72%), Positives = 199/240 (82%), Gaps = 1/240 (0%)
 Frame = +3

Query: 30  YCCSVKKHHRRSFNRFYCHSVECNSKHVESAERRY-LPPWFSVAPMMDWTDNHYRTLARL 206
           +   +   +R S+  F  H+ +           RY LPPWFSVAPMMDWTD+HYRTLARL
Sbjct: 27  FTVGISHRNRCSYRLFSTHAQKHQLHEKPGVVARYHLPPWFSVAPMMDWTDHHYRTLARL 86

Query: 207 ISKHAWLYTEMVVAETIVHQEGNLDRFLSFPPEQHPIILQIGGSNLENLAKAAGLANFYN 386
           ISKHAWLYTEM+ AETIVHQ+ NLDRFL++ P+QHPI+LQIGGSN+ENLAKA  LAN Y 
Sbjct: 87  ISKHAWLYTEMLAAETIVHQKDNLDRFLAYSPDQHPIVLQIGGSNIENLAKATELANAYC 146

Query: 387 YDAINLNCGCPSGKVAGHGCFGARLMLNPKFVAEAMSAIAENCDAPVSVKCRIGVDNHDS 566
           YD INLNCGCPS KVAGHGCFG  LMLNPKFVAEAMSAIA + + PVSVKCRIGVD+HDS
Sbjct: 147 YDEINLNCGCPSPKVAGHGCFGVSLMLNPKFVAEAMSAIAASTNVPVSVKCRIGVDDHDS 206

Query: 567 YNELCDFIYKVASGSPTRHFIIHARKALLNGISPAANRKIPPLKYEYYFGLLRDFPDLQF 746
           YNELCDFIY+V+S SPT+HFIIH+RKALLNGISPA NR IPPLKYEY++GLLRDFPDL+F
Sbjct: 207 YNELCDFIYQVSSLSPTKHFIIHSRKALLNGISPAENRSIPPLKYEYFYGLLRDFPDLRF 266


>ref|XP_004975107.1| PREDICTED: tRNA-dihydrouridine(47) synthase [NAD(P)(+)]-like
           [Setaria italica]
          Length = 430

 Score =  365 bits (936), Expect = 1e-98
 Identities = 171/209 (81%), Positives = 189/209 (90%)
 Frame = +3

Query: 120 AERRYLPPWFSVAPMMDWTDNHYRTLARLISKHAWLYTEMVVAETIVHQEGNLDRFLSFP 299
           A  ++LPP FSVAPMMDWTDNHYRTLARLIS+HAWLYTEMVVAETIVHQ+ NLDRFL+FP
Sbjct: 49  AAGKHLPPLFSVAPMMDWTDNHYRTLARLISRHAWLYTEMVVAETIVHQKDNLDRFLAFP 108

Query: 300 PEQHPIILQIGGSNLENLAKAAGLANFYNYDAINLNCGCPSGKVAGHGCFGARLMLNPKF 479
            EQHPI+LQIGGSNL+NLAKA  LAN Y+YD INLNCGCPSGKVAGHGCFGARLM +P+F
Sbjct: 109 EEQHPIVLQIGGSNLKNLAKATELANAYSYDEINLNCGCPSGKVAGHGCFGARLMFDPEF 168

Query: 480 VAEAMSAIAENCDAPVSVKCRIGVDNHDSYNELCDFIYKVASGSPTRHFIIHARKALLNG 659
           V +AMSAIA NCD PVSVKCRIGVD+ DSY ELCDF+ KV S SPTRHFIIHARKALL+G
Sbjct: 169 VGDAMSAIAANCDVPVSVKCRIGVDDCDSYEELCDFVDKVVSNSPTRHFIIHARKALLSG 228

Query: 660 ISPAANRKIPPLKYEYYFGLLRDFPDLQF 746
           ISPA NRK+PPLKYEYYF LLRDFP+++F
Sbjct: 229 ISPAENRKVPPLKYEYYFALLRDFPEVKF 257


>gb|EAY93387.1| hypothetical protein OsI_15183 [Oryza sativa Indica Group]
          Length = 437

 Score =  364 bits (934), Expect = 2e-98
 Identities = 169/205 (82%), Positives = 187/205 (91%)
 Frame = +3

Query: 132 YLPPWFSVAPMMDWTDNHYRTLARLISKHAWLYTEMVVAETIVHQEGNLDRFLSFPPEQH 311
           +LPP FSVAPMMDWTDNHYRTLARLISKHAWLYTEMVVAETIVHQ+ NLDRFL+FP EQH
Sbjct: 60  HLPPLFSVAPMMDWTDNHYRTLARLISKHAWLYTEMVVAETIVHQKDNLDRFLAFPAEQH 119

Query: 312 PIILQIGGSNLENLAKAAGLANFYNYDAINLNCGCPSGKVAGHGCFGARLMLNPKFVAEA 491
           PI+LQIGGSNL+NLAKA  LAN Y+YD INLNCGCPSGKVAGHGCFGARLM +P+FV +A
Sbjct: 120 PIVLQIGGSNLDNLAKATELANAYSYDEINLNCGCPSGKVAGHGCFGARLMFDPEFVGDA 179

Query: 492 MSAIAENCDAPVSVKCRIGVDNHDSYNELCDFIYKVASGSPTRHFIIHARKALLNGISPA 671
           MSAIA NC+ PVS+KCRIGVD+ DSY ELC+F+ KV S SPTRHFIIHARKALL+G+SPA
Sbjct: 180 MSAIAANCNVPVSIKCRIGVDDRDSYEELCEFVDKVVSKSPTRHFIIHARKALLSGLSPA 239

Query: 672 ANRKIPPLKYEYYFGLLRDFPDLQF 746
            NRK+PPLKYEYYF LLRDFPD+QF
Sbjct: 240 ENRKVPPLKYEYYFALLRDFPDVQF 264


>ref|XP_002517816.1| tRNA-dihydrouridine synthase A, putative [Ricinus communis]
           gi|223543088|gb|EEF44623.1| tRNA-dihydrouridine synthase
           A, putative [Ricinus communis]
          Length = 375

 Score =  363 bits (932), Expect = 3e-98
 Identities = 170/206 (82%), Positives = 185/206 (89%)
 Frame = +3

Query: 129 RYLPPWFSVAPMMDWTDNHYRTLARLISKHAWLYTEMVVAETIVHQEGNLDRFLSFPPEQ 308
           RY PP FSVAPMMDWTD+HYRTLARLISKH+WLYTEM+ AETIV+Q+GNLDRFL+F P+Q
Sbjct: 5   RYHPPLFSVAPMMDWTDHHYRTLARLISKHSWLYTEMLAAETIVYQQGNLDRFLAFSPQQ 64

Query: 309 HPIILQIGGSNLENLAKAAGLANFYNYDAINLNCGCPSGKVAGHGCFGARLMLNPKFVAE 488
           HPI+LQIGGSNL+NLAKA  LA  Y YD IN NCGCPS +VAGHGCFG RLML+PKFV E
Sbjct: 65  HPIVLQIGGSNLDNLAKATELATAYGYDEINFNCGCPSPRVAGHGCFGVRLMLDPKFVGE 124

Query: 489 AMSAIAENCDAPVSVKCRIGVDNHDSYNELCDFIYKVASGSPTRHFIIHARKALLNGISP 668
           AMS IA N D PVSVKCRIGVDNHDSYNELCDFIYKV+S SPT+HFIIH+RKALLNGISP
Sbjct: 125 AMSVIAANTDVPVSVKCRIGVDNHDSYNELCDFIYKVSSLSPTKHFIIHSRKALLNGISP 184

Query: 669 AANRKIPPLKYEYYFGLLRDFPDLQF 746
           A NRKIPPLKYEYYF LLRDFPDL+F
Sbjct: 185 AENRKIPPLKYEYYFALLRDFPDLRF 210


>ref|XP_003599260.1| tRNA-dihydrouridine synthase A [Medicago truncatula]
           gi|355488308|gb|AES69511.1| tRNA-dihydrouridine synthase
           A [Medicago truncatula]
          Length = 294

 Score =  363 bits (931), Expect = 4e-98
 Identities = 169/208 (81%), Positives = 186/208 (89%)
 Frame = +3

Query: 123 ERRYLPPWFSVAPMMDWTDNHYRTLARLISKHAWLYTEMVVAETIVHQEGNLDRFLSFPP 302
           E  YLPPWFSVAPMMDWTDNHYRTLARLISKHAWLYTEM+ AETIV+Q+GNLDRFL++PP
Sbjct: 3   EDDYLPPWFSVAPMMDWTDNHYRTLARLISKHAWLYTEMLAAETIVYQKGNLDRFLAYPP 62

Query: 303 EQHPIILQIGGSNLENLAKAAGLANFYNYDAINLNCGCPSGKVAGHGCFGARLMLNPKFV 482
           +QHPI+LQIGGSNLENLAKA  LA+ Y YD IN NCGCPS +VAG GCFGARLML PKFV
Sbjct: 63  DQHPIVLQIGGSNLENLAKATKLADAYGYDEINFNCGCPSPRVAGRGCFGARLMLEPKFV 122

Query: 483 AEAMSAIAENCDAPVSVKCRIGVDNHDSYNELCDFIYKVASGSPTRHFIIHARKALLNGI 662
           AEA+S IA N + PVSVKCRIGVD+HDSYNELCDFIYKV+S SP RHFIIH+RKALL G+
Sbjct: 123 AEAVSVIAANTNVPVSVKCRIGVDDHDSYNELCDFIYKVSSLSPARHFIIHSRKALLKGL 182

Query: 663 SPAANRKIPPLKYEYYFGLLRDFPDLQF 746
           SPA NR IPPLKYEY++GLLRDFPDL F
Sbjct: 183 SPAENRSIPPLKYEYFYGLLRDFPDLTF 210