BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus22_contig00018984
         (381 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AHC13200.1| polyprotein [Citrus endogenous pararetrovirus]         183   3e-44
gb|AHC13197.1| polyprotein [Citrus endogenous pararetrovirus]         183   3e-44
ref|YP_008992013.1| polyprotein [Citrus endogenous pararetroviru...   183   3e-44
ref|XP_004491299.1| PREDICTED: genome polyprotein-like [Cicer ar...   173   3e-41
ref|XP_004497811.1| PREDICTED: genome polyprotein-like [Cicer ar...   172   4e-41
ref|XP_004509641.1| PREDICTED: genome polyprotein-like [Cicer ar...   164   1e-38
ref|XP_004499727.1| PREDICTED: genome polyprotein-like [Cicer ar...   162   3e-38
ref|XP_004511185.1| PREDICTED: genome polyprotein-like [Cicer ar...   161   8e-38
ref|XP_004514313.1| PREDICTED: genome polyprotein-like [Cicer ar...   159   3e-37
ref|XP_004511013.1| PREDICTED: genome polyprotein-like [Cicer ar...   157   1e-36
ref|XP_004488413.1| PREDICTED: genome polyprotein-like [Cicer ar...   153   3e-35
ref|XP_004511143.1| PREDICTED: genome polyprotein-like [Cicer ar...   152   5e-35
ref|XP_004512786.1| PREDICTED: genome polyprotein-like [Cicer ar...   148   9e-34
ref|XP_006409622.1| hypothetical protein EUTSA_v10023188mg, part...   144   2e-32
ref|XP_006393720.1| hypothetical protein EUTSA_v10012231mg, part...   141   1e-31
ref|XP_006405940.1| hypothetical protein EUTSA_v10028344mg [Eutr...   135   8e-30
gb|AAO67369.1| polyprotein 1 [Petunia vein clearing virus]            135   8e-30
sp|Q6XKE6.1|POLG_PVCV2 RecName: Full=Genome polyprotein; Contain...   135   8e-30
ref|XP_006419165.1| hypothetical protein EUTSA_v100029341mg, par...   134   1e-29
ref|NP_127504.1| ORF I polyprotein [Petunia vein clearing virus]...   134   1e-29

>gb|AHC13200.1| polyprotein [Citrus endogenous pararetrovirus]
          Length = 1701

 Score =  183 bits (464), Expect = 3e-44
 Identities = 84/126 (66%), Positives = 98/126 (77%)
 Frame = -3

Query: 379  PTSHNTFLHPNPLYKNPSFFIRLPFKQSEDANPTKAIHPGMPPQDLTLAKSECENLLLQG 200
            P SH+ F HPNPL+KN SFF++LPFK +ED NPTKA HPGM P DL LA+ EC  LL QG
Sbjct: 1196 PESHSEFTHPNPLWKNQSFFVKLPFKLNEDINPTKATHPGMSPSDLLLAQQECSQLLAQG 1255

Query: 199  LIEPTISDWACQAFYVNKRAEVKRGKKRLVIDYKPLNVFLKDNKFPLPKIQTQIVLLGGA 20
            LIEPT S WACQAFYV K +E+ RGKKRLVIDY+PLN+FL+D+KFPLP+ Q+    L  A
Sbjct: 1256 LIEPTTSQWACQAFYVEKHSEIVRGKKRLVIDYQPLNMFLQDDKFPLPRRQSMFTFLKNA 1315

Query: 19   YYFSKF 2
              FSKF
Sbjct: 1316 QIFSKF 1321


>gb|AHC13197.1| polyprotein [Citrus endogenous pararetrovirus]
          Length = 1799

 Score =  183 bits (464), Expect = 3e-44
 Identities = 84/126 (66%), Positives = 98/126 (77%)
 Frame = -3

Query: 379  PTSHNTFLHPNPLYKNPSFFIRLPFKQSEDANPTKAIHPGMPPQDLTLAKSECENLLLQG 200
            P SH+ F HPNPL+KN SFF++LPFK +ED NPTKA HPGM P DL LA+ EC  LL QG
Sbjct: 1294 PESHSEFTHPNPLWKNQSFFVKLPFKLNEDINPTKATHPGMSPSDLLLAQQECSQLLAQG 1353

Query: 199  LIEPTISDWACQAFYVNKRAEVKRGKKRLVIDYKPLNVFLKDNKFPLPKIQTQIVLLGGA 20
            LIEPT S WACQAFYV K +E+ RGKKRLVIDY+PLN+FL+D+KFPLP+ Q+    L  A
Sbjct: 1354 LIEPTTSQWACQAFYVEKHSEIVRGKKRLVIDYQPLNMFLQDDKFPLPRRQSMFTFLKNA 1413

Query: 19   YYFSKF 2
              FSKF
Sbjct: 1414 QIFSKF 1419


>ref|YP_008992013.1| polyprotein [Citrus endogenous pararetrovirus]
            gi|565672276|gb|AHC13194.1| polyprotein [Citrus
            endogenous pararetrovirus]
          Length = 1812

 Score =  183 bits (464), Expect = 3e-44
 Identities = 84/126 (66%), Positives = 98/126 (77%)
 Frame = -3

Query: 379  PTSHNTFLHPNPLYKNPSFFIRLPFKQSEDANPTKAIHPGMPPQDLTLAKSECENLLLQG 200
            P SH+ F HPNPL+KN SFF++LPFK +ED NPTKA HPGM P DL LA+ EC  LL QG
Sbjct: 1307 PESHSEFTHPNPLWKNQSFFVKLPFKLNEDINPTKATHPGMSPSDLLLAQQECSQLLAQG 1366

Query: 199  LIEPTISDWACQAFYVNKRAEVKRGKKRLVIDYKPLNVFLKDNKFPLPKIQTQIVLLGGA 20
            LIEPT S WACQAFYV K +E+ RGKKRLVIDY+PLN+FL+D+KFPLP+ Q+    L  A
Sbjct: 1367 LIEPTTSQWACQAFYVEKHSEIVRGKKRLVIDYQPLNMFLQDDKFPLPRRQSMFTFLKNA 1426

Query: 19   YYFSKF 2
              FSKF
Sbjct: 1427 QIFSKF 1432


>ref|XP_004491299.1| PREDICTED: genome polyprotein-like [Cicer arietinum]
          Length = 894

 Score =  173 bits (438), Expect = 3e-41
 Identities = 82/124 (66%), Positives = 93/124 (75%)
 Frame = -3

Query: 373 SHNTFLHPNPLYKNPSFFIRLPFKQSEDANPTKAIHPGMPPQDLTLAKSECENLLLQGLI 194
           SH  F HPNPL+ N  FF++LPFK +ED NPTKA HPGM P DL LA+ EC  LL QGLI
Sbjct: 520 SHGQFSHPNPLWTNKDFFVQLPFKLNEDINPTKATHPGMSPSDLALAREECNQLLQQGLI 579

Query: 193 EPTISDWACQAFYVNKRAEVKRGKKRLVIDYKPLNVFLKDNKFPLPKIQTQIVLLGGAYY 14
           EPT S+WACQAFYV KR+E  RGKKRLVIDYKPLN FLKD+KFP+PK  +    L  A  
Sbjct: 580 EPTKSEWACQAFYVEKRSEKIRGKKRLVIDYKPLNHFLKDDKFPIPKTSSLNTFLKDAQV 639

Query: 13  FSKF 2
           +SKF
Sbjct: 640 YSKF 643


>ref|XP_004497811.1| PREDICTED: genome polyprotein-like [Cicer arietinum]
          Length = 1951

 Score =  172 bits (436), Expect = 4e-41
 Identities = 81/124 (65%), Positives = 93/124 (75%)
 Frame = -3

Query: 373  SHNTFLHPNPLYKNPSFFIRLPFKQSEDANPTKAIHPGMPPQDLTLAKSECENLLLQGLI 194
            SH  F HPNPL+ N  FF++LPFK +ED NPTKA HPGM P DL LA+ EC  LL QGLI
Sbjct: 1310 SHGQFSHPNPLWTNKDFFVQLPFKLNEDINPTKATHPGMSPSDLALAREECNQLLQQGLI 1369

Query: 193  EPTISDWACQAFYVNKRAEVKRGKKRLVIDYKPLNVFLKDNKFPLPKIQTQIVLLGGAYY 14
            EPT S+WACQAFYV KR+E  RGKKRLVIDYKPLN FLKD+KFP+PK  +  + L  A  
Sbjct: 1370 EPTKSEWACQAFYVEKRSEKIRGKKRLVIDYKPLNHFLKDDKFPIPKTSSLNIFLKDAQV 1429

Query: 13   FSKF 2
            +S F
Sbjct: 1430 YSNF 1433


>ref|XP_004509641.1| PREDICTED: genome polyprotein-like [Cicer arietinum]
          Length = 293

 Score =  164 bits (415), Expect = 1e-38
 Identities = 77/124 (62%), Positives = 91/124 (73%)
 Frame = -3

Query: 373 SHNTFLHPNPLYKNPSFFIRLPFKQSEDANPTKAIHPGMPPQDLTLAKSECENLLLQGLI 194
           +H  F HP PL+ N  FF++LPFK +ED NPTKA HPGM P DL LA+ EC  LL QGLI
Sbjct: 128 NHGQFSHPKPLWTNKDFFVQLPFKLNEDINPTKATHPGMSPSDLALAREECNQLLQQGLI 187

Query: 193 EPTISDWACQAFYVNKRAEVKRGKKRLVIDYKPLNVFLKDNKFPLPKIQTQIVLLGGAYY 14
           E T S+WACQA YV KR+E  RG+KRLVIDYKPLN FLKD+KFP+PK  +  + L  A  
Sbjct: 188 ESTKSEWACQAIYVEKRSEKIRGRKRLVIDYKPLNHFLKDDKFPIPKTSSLNIFLKDAQI 247

Query: 13  FSKF 2
           +SKF
Sbjct: 248 YSKF 251


>ref|XP_004499727.1| PREDICTED: genome polyprotein-like [Cicer arietinum]
          Length = 1645

 Score =  162 bits (411), Expect = 3e-38
 Identities = 77/124 (62%), Positives = 90/124 (72%)
 Frame = -3

Query: 373  SHNTFLHPNPLYKNPSFFIRLPFKQSEDANPTKAIHPGMPPQDLTLAKSECENLLLQGLI 194
            +H  F HP PL+ N  FFI+LPFK +ED NPTKA HPGM P DL LA+ EC  LL QGLI
Sbjct: 1255 NHGQFSHPKPLWTNKDFFIQLPFKLNEDINPTKATHPGMSPSDLALAREECNQLLQQGLI 1314

Query: 193  EPTISDWACQAFYVNKRAEVKRGKKRLVIDYKPLNVFLKDNKFPLPKIQTQIVLLGGAYY 14
            EPT  +WACQAFYV KR++  R KKR+VIDYKPLN FLKD KFP+PK  +  + L  A  
Sbjct: 1315 EPTKFEWACQAFYVEKRSKKIRVKKRMVIDYKPLNHFLKDGKFPIPKTSSLNIFLKDAQI 1374

Query: 13   FSKF 2
            +SKF
Sbjct: 1375 YSKF 1378


>ref|XP_004511185.1| PREDICTED: genome polyprotein-like [Cicer arietinum]
          Length = 803

 Score =  161 bits (408), Expect = 8e-38
 Identities = 76/124 (61%), Positives = 89/124 (71%)
 Frame = -3

Query: 373 SHNTFLHPNPLYKNPSFFIRLPFKQSEDANPTKAIHPGMPPQDLTLAKSECENLLLQGLI 194
           +H  F HP PL+ N  FF++LPFK +ED NPTKA HPGM P DL L + EC  LL QGLI
Sbjct: 386 NHGQFSHPKPLWTNKDFFVQLPFKLNEDINPTKATHPGMSPSDLALVREECNQLLQQGLI 445

Query: 193 EPTISDWACQAFYVNKRAEVKRGKKRLVIDYKPLNVFLKDNKFPLPKIQTQIVLLGGAYY 14
           E T  +WACQAFYV KR+E  RGKKRL IDYKPLN FLKD+KFP+PK  +  + L  A  
Sbjct: 446 ELTKFEWACQAFYVEKRSEKIRGKKRLAIDYKPLNHFLKDDKFPIPKTSSLNIFLKDAQI 505

Query: 13  FSKF 2
           +SKF
Sbjct: 506 YSKF 509


>ref|XP_004514313.1| PREDICTED: genome polyprotein-like [Cicer arietinum]
          Length = 211

 Score =  159 bits (403), Expect = 3e-37
 Identities = 76/118 (64%), Positives = 89/118 (75%)
 Frame = -3

Query: 355 HPNPLYKNPSFFIRLPFKQSEDANPTKAIHPGMPPQDLTLAKSECENLLLQGLIEPTISD 176
           HP PL+ N  FF++LPFK +ED NPTKA HPGM P DL LA+ EC  LL QGLIE T S+
Sbjct: 45  HPKPLWTNKDFFVQLPFKLNEDINPTKATHPGMSPSDLALAREECNQLLKQGLIELTKSE 104

Query: 175 WACQAFYVNKRAEVKRGKKRLVIDYKPLNVFLKDNKFPLPKIQTQIVLLGGAYYFSKF 2
           WACQAFYV KR+E  RGKKRLVIDYKPLN FLKD+KFP+ K  +  + L  A+ +SKF
Sbjct: 105 WACQAFYVEKRSEKIRGKKRLVIDYKPLNHFLKDDKFPILKTSSLNIFLKDAHIYSKF 162


>ref|XP_004511013.1| PREDICTED: genome polyprotein-like [Cicer arietinum]
          Length = 335

 Score =  157 bits (397), Expect = 1e-36
 Identities = 75/124 (60%), Positives = 89/124 (71%)
 Frame = -3

Query: 373 SHNTFLHPNPLYKNPSFFIRLPFKQSEDANPTKAIHPGMPPQDLTLAKSECENLLLQGLI 194
           +H  F HP PL+ N  FF++LPFK +ED NPTKA HPGM P +L L + EC  LL QGLI
Sbjct: 128 NHGKFSHPKPLWTNKDFFVQLPFKLNEDINPTKATHPGMSPSNLALPREECNQLLKQGLI 187

Query: 193 EPTISDWACQAFYVNKRAEVKRGKKRLVIDYKPLNVFLKDNKFPLPKIQTQIVLLGGAYY 14
           EPT S+WACQAFYV KR+E  R KKRLVIDYKPLN FLKD+KF + K  +  + L  A  
Sbjct: 188 EPTKSEWACQAFYVEKRSEKVRRKKRLVIDYKPLNHFLKDDKFLISKTSSLNIFLKDAQI 247

Query: 13  FSKF 2
           +SKF
Sbjct: 248 YSKF 251


>ref|XP_004488413.1| PREDICTED: genome polyprotein-like [Cicer arietinum]
          Length = 221

 Score =  153 bits (386), Expect = 3e-35
 Identities = 73/124 (58%), Positives = 88/124 (70%)
 Frame = -3

Query: 373 SHNTFLHPNPLYKNPSFFIRLPFKQSEDANPTKAIHPGMPPQDLTLAKSECENLLLQGLI 194
           +H  F HP PL+ N  FF++LPFK +ED NPTKA H G+ P DL L + EC  LL QGL+
Sbjct: 57  NHEKFSHPKPLWTNKVFFVQLPFKLNEDINPTKATHLGISPSDLALTRKECNQLLKQGLV 116

Query: 193 EPTISDWACQAFYVNKRAEVKRGKKRLVIDYKPLNVFLKDNKFPLPKIQTQIVLLGGAYY 14
           EPT S+WACQAFYV KR+E  RGKKRLVI YKPLN FLKD+KF + K  +  + L  A  
Sbjct: 117 EPTKSEWACQAFYVEKRSEKMRGKKRLVIHYKPLNHFLKDDKFLILKTSSLNIFLKDAQI 176

Query: 13  FSKF 2
           +SKF
Sbjct: 177 YSKF 180


>ref|XP_004511143.1| PREDICTED: genome polyprotein-like [Cicer arietinum]
          Length = 257

 Score =  152 bits (384), Expect = 5e-35
 Identities = 73/124 (58%), Positives = 88/124 (70%)
 Frame = -3

Query: 373 SHNTFLHPNPLYKNPSFFIRLPFKQSEDANPTKAIHPGMPPQDLTLAKSECENLLLQGLI 194
           +H  F HP PL+ N  FF++LPFK +ED NP KA HPG  P DL LA+ EC  LL +G I
Sbjct: 128 NHGKFSHPKPLWTNKDFFVQLPFKLNEDINPVKATHPGTSPSDLALAREECNQLLQEGPI 187

Query: 193 EPTISDWACQAFYVNKRAEVKRGKKRLVIDYKPLNVFLKDNKFPLPKIQTQIVLLGGAYY 14
           EPT S+ ACQAFYV KR+E  R K++LVIDYKPLN FLKD+KFP+PK  +  V L  A  
Sbjct: 188 EPTKSEKACQAFYVEKRSEKIRRKRKLVIDYKPLNHFLKDDKFPIPKTSSLNVFLKDAQI 247

Query: 13  FSKF 2
           +SKF
Sbjct: 248 YSKF 251


>ref|XP_004512786.1| PREDICTED: genome polyprotein-like [Cicer arietinum]
          Length = 415

 Score =  148 bits (373), Expect = 9e-34
 Identities = 72/124 (58%), Positives = 85/124 (68%)
 Frame = -3

Query: 373 SHNTFLHPNPLYKNPSFFIRLPFKQSEDANPTKAIHPGMPPQDLTLAKSECENLLLQGLI 194
           SH  F HP PL+ N  FF++L FK +ED NPTKA HPGM P DL L++ EC  LL Q LI
Sbjct: 196 SHEKFSHPKPLWTNKDFFVQLHFKLNEDINPTKATHPGMSPSDLALSREECNQLLKQDLI 255

Query: 193 EPTISDWACQAFYVNKRAEVKRGKKRLVIDYKPLNVFLKDNKFPLPKIQTQIVLLGGAYY 14
           EPT  +W  QAFYV KR+E  RGK  LVIDYKPLN FLKD+KFP+ K  +  + L  A  
Sbjct: 256 EPTKYEWVGQAFYVEKRSEKIRGKNMLVIDYKPLNHFLKDDKFPILKTSSLNIFLKDAQI 315

Query: 13  FSKF 2
           +SKF
Sbjct: 316 YSKF 319


>ref|XP_006409622.1| hypothetical protein EUTSA_v10023188mg, partial [Eutrema salsugineum]
            gi|557110784|gb|ESQ51075.1| hypothetical protein
            EUTSA_v10023188mg, partial [Eutrema salsugineum]
          Length = 1101

 Score =  144 bits (362), Expect = 2e-32
 Identities = 75/127 (59%), Positives = 89/127 (70%), Gaps = 2/127 (1%)
 Frame = -3

Query: 376  TSHNTFLHP--NPLYKNPSFFIRLPFKQSEDANPTKAIHPGMPPQDLTLAKSECENLLLQ 203
            +SH+ FL    +PL+KNP FFI LPFK++ED NPTKA HPGM P   TLA  E   L  +
Sbjct: 796  SSHSEFLTKCSSPLWKNPDFFISLPFKKNEDINPTKASHPGMNPNHYTLALEEVNLLQKE 855

Query: 202  GLIEPTISDWACQAFYVNKRAEVKRGKKRLVIDYKPLNVFLKDNKFPLPKIQTQIVLLGG 23
            GLI+ T S WAC+AFYVNK+AE  RGK RLVI+Y+PLN FL D+KFPLPK +     L  
Sbjct: 856  GLIKTTTSPWACEAFYVNKKAEQVRGKLRLVINYQPLNHFLADDKFPLPKREVLFQRLPQ 915

Query: 22   AYYFSKF 2
            A  FSKF
Sbjct: 916  AQVFSKF 922


>ref|XP_006393720.1| hypothetical protein EUTSA_v10012231mg, partial [Eutrema salsugineum]
            gi|557090298|gb|ESQ31006.1| hypothetical protein
            EUTSA_v10012231mg, partial [Eutrema salsugineum]
          Length = 1904

 Score =  141 bits (355), Expect = 1e-31
 Identities = 75/127 (59%), Positives = 88/127 (69%), Gaps = 2/127 (1%)
 Frame = -3

Query: 376  TSHNTFLHP--NPLYKNPSFFIRLPFKQSEDANPTKAIHPGMPPQDLTLAKSECENLLLQ 203
            +SH+ FL    +PL++NP FFI LPFK++ED NPTKA H GM P   TLA  E   L  +
Sbjct: 1199 SSHSEFLTKCSSPLWQNPDFFISLPFKKNEDINPTKASHLGMNPDHYTLALEEVNLLQKE 1258

Query: 202  GLIEPTISDWACQAFYVNKRAEVKRGKKRLVIDYKPLNVFLKDNKFPLPKIQTQIVLLGG 23
            GLIE T S WAC+AFYVNKRAE  RGK RLVI+Y+PLN FL D+KFPLPK +     L  
Sbjct: 1259 GLIEKTTSPWACEAFYVNKRAEQVRGKLRLVINYQPLNHFLADDKFPLPKREVLFQRLPQ 1318

Query: 22   AYYFSKF 2
            A  FSKF
Sbjct: 1319 AQVFSKF 1325


>ref|XP_006405940.1| hypothetical protein EUTSA_v10028344mg [Eutrema salsugineum]
            gi|557107078|gb|ESQ47393.1| hypothetical protein
            EUTSA_v10028344mg [Eutrema salsugineum]
          Length = 1508

 Score =  135 bits (339), Expect = 8e-30
 Identities = 72/127 (56%), Positives = 86/127 (67%), Gaps = 2/127 (1%)
 Frame = -3

Query: 376  TSHNTFLHP--NPLYKNPSFFIRLPFKQSEDANPTKAIHPGMPPQDLTLAKSECENLLLQ 203
            +SH+ FL    +PL++N  FFI LPFK++ED NPTKA HPGM P   TLA  E   L  +
Sbjct: 783  SSHSEFLTKCSSPLWQNSDFFISLPFKKNEDINPTKASHPGMKPDHYTLALEEVNLLQKE 842

Query: 202  GLIEPTISDWACQAFYVNKRAEVKRGKKRLVIDYKPLNVFLKDNKFPLPKIQTQIVLLGG 23
            GLIE T S WAC+AFYVN+RA   R K RLVI+Y+PLN FL D+KFPLPK +     L  
Sbjct: 843  GLIEKTTSPWACEAFYVNQRAGQVREKLRLVINYQPLNHFLADDKFPLPKREVLFQRLPQ 902

Query: 22   AYYFSKF 2
            A  FSKF
Sbjct: 903  AQVFSKF 909


>gb|AAO67369.1| polyprotein 1 [Petunia vein clearing virus]
          Length = 1886

 Score =  135 bits (339), Expect = 8e-30
 Identities = 71/126 (56%), Positives = 87/126 (69%), Gaps = 2/126 (1%)
 Frame = -3

Query: 373  SHNTFLHP--NPLYKNPSFFIRLPFKQSEDANPTKAIHPGMPPQDLTLAKSECENLLLQG 200
            SH  FL    +PL+ N  FFI+LPFK++E+ NPTKA H GM P+ L LA  EC+ L    
Sbjct: 1354 SHVDFLSKCSHPLWLNQDFFIQLPFKRNENINPTKASHSGMNPEHLQLALKECDELQQFD 1413

Query: 199  LIEPTISDWACQAFYVNKRAEVKRGKKRLVIDYKPLNVFLKDNKFPLPKIQTQIVLLGGA 20
            LIEP+ S WAC+AFYVNKR+E  RGK RLVI+Y+PLN FL+D+KFP+P   T    L  A
Sbjct: 1414 LIEPSDSQWACEAFYVNKRSEQVRGKLRLVINYQPLNHFLQDDKFPIPNKLTLFSHLSKA 1473

Query: 19   YYFSKF 2
              FSKF
Sbjct: 1474 KLFSKF 1479


>sp|Q6XKE6.1|POLG_PVCV2 RecName: Full=Genome polyprotein; Contains: RecName: Full=Movement
            protein; Short=MP; Contains: RecName: Full=Capsid
            protein; Short=CP; Contains: RecName: Full=Aspartic
            protease; Short=PR; Contains: RecName: Full=Reverse
            transcriptase; Short=RT gi|34328896|gb|AAO67368.1|
            polyprotein 1 [Petunia vein clearing virus]
          Length = 2180

 Score =  135 bits (339), Expect = 8e-30
 Identities = 71/126 (56%), Positives = 87/126 (69%), Gaps = 2/126 (1%)
 Frame = -3

Query: 373  SHNTFLHP--NPLYKNPSFFIRLPFKQSEDANPTKAIHPGMPPQDLTLAKSECENLLLQG 200
            SH  FL    +PL+ N  FFI+LPFK++E+ NPTKA H GM P+ L LA  EC+ L    
Sbjct: 1354 SHVDFLSKCSHPLWLNQDFFIQLPFKRNENINPTKASHSGMNPEHLQLALKECDELQQFD 1413

Query: 199  LIEPTISDWACQAFYVNKRAEVKRGKKRLVIDYKPLNVFLKDNKFPLPKIQTQIVLLGGA 20
            LIEP+ S WAC+AFYVNKR+E  RGK RLVI+Y+PLN FL+D+KFP+P   T    L  A
Sbjct: 1414 LIEPSDSQWACEAFYVNKRSEQVRGKLRLVINYQPLNHFLQDDKFPIPNKLTLFSHLSKA 1473

Query: 19   YYFSKF 2
              FSKF
Sbjct: 1474 KLFSKF 1479


>ref|XP_006419165.1| hypothetical protein EUTSA_v100029341mg, partial [Eutrema
           salsugineum] gi|557097093|gb|ESQ37601.1| hypothetical
           protein EUTSA_v100029341mg, partial [Eutrema
           salsugineum]
          Length = 735

 Score =  134 bits (338), Expect = 1e-29
 Identities = 70/126 (55%), Positives = 82/126 (65%), Gaps = 2/126 (1%)
 Frame = -3

Query: 373 SHNTFLHP--NPLYKNPSFFIRLPFKQSEDANPTKAIHPGMPPQDLTLAKSECENLLLQG 200
           SH  FL     PL+ N  FF  LPFK++    PTKA H GMPP  LT A  EC+ L+ QG
Sbjct: 394 SHTDFLQKCDKPLWLNSEFFFSLPFKENVHTTPTKASHAGMPPTLLTQANEECDQLVKQG 453

Query: 199 LIEPTISDWACQAFYVNKRAEVKRGKKRLVIDYKPLNVFLKDNKFPLPKIQTQIVLLGGA 20
           ++  T S WAC+AFYVN RAE  RGK RLVIDYKPLN +L+D KFPLP  +  +  L GA
Sbjct: 454 VVSSTNSPWACKAFYVNNRAEQARGKLRLVIDYKPLNQYLQDVKFPLPIRKALLQHLQGA 513

Query: 19  YYFSKF 2
             FSKF
Sbjct: 514 TIFSKF 519


>ref|NP_127504.1| ORF I polyprotein [Petunia vein clearing virus]
            gi|82061579|sp|Q91DM0.1|POLG_PVCV1 RecName: Full=Genome
            polyprotein; Contains: RecName: Full=Movement protein;
            Short=MP; Contains: RecName: Full=Capsid protein;
            Short=CP; Contains: RecName: Full=Aspartic protease;
            Short=PR; Contains: RecName: Full=Reverse transcriptase;
            Short=RT gi|14574598|gb|AAK68664.1| ORF I polyprotein
            [petunia vein clearing virus]
          Length = 2179

 Score =  134 bits (338), Expect = 1e-29
 Identities = 71/126 (56%), Positives = 87/126 (69%), Gaps = 2/126 (1%)
 Frame = -3

Query: 373  SHNTFLHP--NPLYKNPSFFIRLPFKQSEDANPTKAIHPGMPPQDLTLAKSECENLLLQG 200
            SH  FL    +PL+ N  FFI+LPFK++E+ NPTKA H GM P+ L LA  EC+ L    
Sbjct: 1353 SHVDFLSKCSHPLWLNQDFFIQLPFKKNENINPTKASHSGMNPEHLQLAIKECDELQQFD 1412

Query: 199  LIEPTISDWACQAFYVNKRAEVKRGKKRLVIDYKPLNVFLKDNKFPLPKIQTQIVLLGGA 20
            LIEP+ S WAC+AFYVNKR+E  RGK RLVI+Y+PLN FL+D+KFP+P   T    L  A
Sbjct: 1413 LIEPSDSQWACEAFYVNKRSEQVRGKLRLVINYQPLNHFLQDDKFPIPNKLTLFSHLSKA 1472

Query: 19   YYFSKF 2
              FSKF
Sbjct: 1473 KLFSKF 1478