BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus22_contig00018634
         (579 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004308947.1| PREDICTED: pentatricopeptide repeat-containi...   100   3e-19
ref|XP_002512332.1| pentatricopeptide repeat-containing protein,...    88   1e-15
gb|EXC04708.1| hypothetical protein L484_009901 [Morus notabilis]      87   2e-15
ref|XP_002272959.2| PREDICTED: uncharacterized protein LOC100251...    87   2e-15
emb|CBI25450.3| unnamed protein product [Vitis vinifera]               87   2e-15
emb|CAN73347.1| hypothetical protein VITISV_037919 [Vitis vinifera]    87   2e-15
ref|XP_007008912.1| Tetratricopeptide repeat-like superfamily pr...    86   6e-15
ref|XP_006356467.1| PREDICTED: pentatricopeptide repeat-containi...    86   9e-15
ref|XP_006435776.1| hypothetical protein CICLE_v10033792mg [Citr...    83   6e-14
ref|XP_004235452.1| PREDICTED: pentatricopeptide repeat-containi...    79   1e-12
ref|XP_002311557.2| pentatricopeptide repeat-containing family p...    78   2e-12
gb|EYU43433.1| hypothetical protein MIMGU_mgv1a021376mg [Mimulus...    67   3e-09
ref|XP_004512635.1| PREDICTED: pentatricopeptide repeat-containi...    67   3e-09
ref|XP_004515109.1| PREDICTED: pentatricopeptide repeat-containi...    67   5e-09
ref|XP_007152460.1| hypothetical protein PHAVU_004G132400g [Phas...    66   8e-09
ref|XP_003619716.1| Pentatricopeptide repeat-containing protein ...    66   8e-09
ref|XP_003533266.1| PREDICTED: pentatricopeptide repeat-containi...    65   1e-08
ref|XP_006292480.1| hypothetical protein CARUB_v10018709mg [Caps...    60   4e-07
ref|XP_002876347.1| hypothetical protein ARALYDRAFT_486042 [Arab...    60   4e-07
ref|XP_006847430.1| hypothetical protein AMTR_s00153p00079500 [A...    59   7e-07

>ref|XP_004308947.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g56030-like [Fragaria vesca subsp. vesca]
          Length = 331

 Score =  100 bits (249), Expect = 3e-19
 Identities = 60/119 (50%), Positives = 71/119 (59%)
 Frame = -1

Query: 357 MSLLCKTRLKTLKSPPLLSAISRLFSSETTINETHHHQSYEEVPTSASYDELVSVAGRSR 178
           M LL K   K   S P+L+  +RLF+S           S  + PTSA YD LV+ AG SR
Sbjct: 1   MFLLRKISHKPRNSQPILTVAARLFTSPVN--------SIPDEPTSAHYDLLVNAAGESR 52

Query: 177 DYEALHHLLNKRAKDGCFNTRKTFKFITEVEQEELDPIPYLIQTLSGLESGFTRKNAFD 1
           D++ LHHLL KR KD CFNT  TFKFIT  E   L  +P L QTL+ L  GFTRK A+D
Sbjct: 53  DFDNLHHLLTKRVKDHCFNTVNTFKFITNSE-ASLSLLPKLSQTLARLPKGFTRKCAYD 110


>ref|XP_002512332.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223548293|gb|EEF49784.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 619

 Score = 88.2 bits (217), Expect = 1e-15
 Identities = 50/108 (46%), Positives = 68/108 (62%)
 Frame = -1

Query: 324 LKSPPLLSAISRLFSSETTINETHHHQSYEEVPTSASYDELVSVAGRSRDYEALHHLLNK 145
           L S  +LS  +R F   TT N+  +  S+ + PT+A YD LV+ AG  RD++ LHHLLNK
Sbjct: 298 LNSQSILSLTTRCF---TTQNDKLN--SFPDKPTAAYYDGLVNAAGHERDFKTLHHLLNK 352

Query: 144 RAKDGCFNTRKTFKFITEVEQEELDPIPYLIQTLSGLESGFTRKNAFD 1
           R +D CFNT  TFKFIT  +   L  +  LIQTL+ L+ G  R +A++
Sbjct: 353 RVRDHCFNTTNTFKFITNTD-NSLSVLDDLIQTLARLDKGIPRMSAYN 399


>gb|EXC04708.1| hypothetical protein L484_009901 [Morus notabilis]
          Length = 331

 Score = 87.4 bits (215), Expect = 2e-15
 Identities = 49/119 (41%), Positives = 72/119 (60%)
 Frame = -1

Query: 357 MSLLCKTRLKTLKSPPLLSAISRLFSSETTINETHHHQSYEEVPTSASYDELVSVAGRSR 178
           MSL+ K  +KTL+   +L+ +S LFS+    N   +       P +A YDE+V+ AGRS 
Sbjct: 1   MSLIRKFPIKTLQFRHILT-LSNLFSTSANPNPPSNR------PATAHYDEMVNAAGRSG 53

Query: 177 DYEALHHLLNKRAKDGCFNTRKTFKFITEVEQEELDPIPYLIQTLSGLESGFTRKNAFD 1
           +Y+ L  LLN+R KDGC+NT  TF F+T V  + +  +  L +TL+ L+ G+  K AFD
Sbjct: 54  NYDELRRLLNRRVKDGCYNTTSTFNFVT-VGDDSISAVGRLCETLARLDKGYVMKGAFD 111


>ref|XP_002272959.2| PREDICTED: uncharacterized protein LOC100251820 [Vitis vinifera]
          Length = 613

 Score = 87.4 bits (215), Expect = 2e-15
 Identities = 53/119 (44%), Positives = 70/119 (58%)
 Frame = -1

Query: 357 MSLLCKTRLKTLKSPPLLSAISRLFSSETTINETHHHQSYEEVPTSASYDELVSVAGRSR 178
           MS+L K   K   SP LL   SR F+       T +   YE  PT A YD L++ AGR+R
Sbjct: 1   MSILRKLARKNPNSPFLLCNTSRFFN-------TQNPNPYE--PTVAYYDNLINTAGRNR 51

Query: 177 DYEALHHLLNKRAKDGCFNTRKTFKFITEVEQEELDPIPYLIQTLSGLESGFTRKNAFD 1
           D+ ++ +LLNKR +DGCFNT  TF FIT  +   L  +  L Q L+ L+ GF RK+A+D
Sbjct: 52  DFASVCNLLNKRVRDGCFNTNHTFDFITNTD-AGLSVLDELSQALAHLDKGFLRKSAYD 109


>emb|CBI25450.3| unnamed protein product [Vitis vinifera]
          Length = 527

 Score = 87.4 bits (215), Expect = 2e-15
 Identities = 53/119 (44%), Positives = 70/119 (58%)
 Frame = -1

Query: 357 MSLLCKTRLKTLKSPPLLSAISRLFSSETTINETHHHQSYEEVPTSASYDELVSVAGRSR 178
           MS+L K   K   SP LL   SR F+       T +   YE  PT A YD L++ AGR+R
Sbjct: 1   MSILRKLARKNPNSPFLLCNTSRFFN-------TQNPNPYE--PTVAYYDNLINTAGRNR 51

Query: 177 DYEALHHLLNKRAKDGCFNTRKTFKFITEVEQEELDPIPYLIQTLSGLESGFTRKNAFD 1
           D+ ++ +LLNKR +DGCFNT  TF FIT  +   L  +  L Q L+ L+ GF RK+A+D
Sbjct: 52  DFASVCNLLNKRVRDGCFNTNHTFDFITNTD-AGLSVLDELSQALAHLDKGFLRKSAYD 109


>emb|CAN73347.1| hypothetical protein VITISV_037919 [Vitis vinifera]
          Length = 330

 Score = 87.4 bits (215), Expect = 2e-15
 Identities = 53/119 (44%), Positives = 70/119 (58%)
 Frame = -1

Query: 357 MSLLCKTRLKTLKSPPLLSAISRLFSSETTINETHHHQSYEEVPTSASYDELVSVAGRSR 178
           MS+L K   K   SP LL   SR F+       T +   YE  PT A YD L++ AGR+R
Sbjct: 1   MSILRKLARKNPNSPFLLCNTSRFFN-------TQNPNPYE--PTVAYYDNLINTAGRNR 51

Query: 177 DYEALHHLLNKRAKDGCFNTRKTFKFITEVEQEELDPIPYLIQTLSGLESGFTRKNAFD 1
           D+ ++ +LLNKR +DGCFNT  TF FIT  +   L  +  L Q L+ L+ GF RK+A+D
Sbjct: 52  DFASVCNLLNKRVRDGCFNTNHTFDFITNTD-AGLSVLDELSQALAHLDKGFXRKSAYD 109


>ref|XP_007008912.1| Tetratricopeptide repeat-like superfamily protein, putative
           [Theobroma cacao] gi|508725825|gb|EOY17722.1|
           Tetratricopeptide repeat-like superfamily protein,
           putative [Theobroma cacao]
          Length = 361

 Score = 86.3 bits (212), Expect = 6e-15
 Identities = 52/124 (41%), Positives = 71/124 (57%), Gaps = 2/124 (1%)
 Frame = -1

Query: 366 SIGMSLLCKTRLKTLKSPPLLSAI--SRLFSSETTINETHHHQSYEEVPTSASYDELVSV 193
           ++ MS+L K   K+  S  +L  +  S  F+ +         + + + PTSA YDE V  
Sbjct: 14  TVTMSILRKLHNKSPYSQSILKILPASFFFTGQIPDPGPVPDEPFPDEPTSAYYDEQVYK 73

Query: 192 AGRSRDYEALHHLLNKRAKDGCFNTRKTFKFITEVEQEELDPIPYLIQTLSGLESGFTRK 13
           AGRS D   + HLLNKR +DGCFNT KTFKF+T  E      +  L++T+S L+ G  RK
Sbjct: 74  AGRSGDLVTVGHLLNKRVRDGCFNTTKTFKFLTATE-SSFSILDDLVRTVSRLDKGVPRK 132

Query: 12  NAFD 1
           NAFD
Sbjct: 133 NAFD 136


>ref|XP_006356467.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g56030-like isoform X1 [Solanum tuberosum]
           gi|565380133|ref|XP_006356468.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At3g56030-like isoform X2 [Solanum tuberosum]
          Length = 329

 Score = 85.5 bits (210), Expect = 9e-15
 Identities = 48/117 (41%), Positives = 69/117 (58%)
 Frame = -1

Query: 351 LLCKTRLKTLKSPPLLSAISRLFSSETTINETHHHQSYEEVPTSASYDELVSVAGRSRDY 172
           +L   +L TLKS       SR  SS    N      +  +VP+  +YDE ++ AGR  D+
Sbjct: 1   MLALRKLSTLKS-------SRFLSSFAIQNPICSSSTIPDVPSCTNYDERINKAGREGDF 53

Query: 171 EALHHLLNKRAKDGCFNTRKTFKFITEVEQEELDPIPYLIQTLSGLESGFTRKNAFD 1
             +HHLLNKRA+DG FNT  TFKFI+      LD    L++T++ L++GF RK+++D
Sbjct: 54  TTVHHLLNKRARDGFFNTNNTFKFISTNNVSILDD---LLETIARLDNGFPRKSSYD 107


>ref|XP_006435776.1| hypothetical protein CICLE_v10033792mg [Citrus clementina]
           gi|557537972|gb|ESR49016.1| hypothetical protein
           CICLE_v10033792mg [Citrus clementina]
          Length = 556

 Score = 82.8 bits (203), Expect = 6e-14
 Identities = 41/81 (50%), Positives = 55/81 (67%)
 Frame = -1

Query: 243 SYEEVPTSASYDELVSVAGRSRDYEALHHLLNKRAKDGCFNTRKTFKFITEVEQEELDPI 64
           ++ + PTSA YD+LV+ AG  RD E + +LLNKRA+D CFNT  TF FIT  E   L  +
Sbjct: 28  AFPDEPTSAYYDDLVNAAGHERDLETVRYLLNKRARDCCFNTANTFNFITNTE-NSLSVL 86

Query: 63  PYLIQTLSGLESGFTRKNAFD 1
             L +TL+ L+ GF RK+A+D
Sbjct: 87  SDLCRTLARLDKGFPRKSAYD 107


>ref|XP_004235452.1| PREDICTED: pentatricopeptide repeat-containing protein At2g40240,
           mitochondrial-like [Solanum lycopersicum]
          Length = 366

 Score = 78.6 bits (192), Expect = 1e-12
 Identities = 46/117 (39%), Positives = 66/117 (56%)
 Frame = -1

Query: 351 LLCKTRLKTLKSPPLLSAISRLFSSETTINETHHHQSYEEVPTSASYDELVSVAGRSRDY 172
           +L   +L TLKS       SR  SS    N      +  +VP+  +YDE ++ AGR  D+
Sbjct: 1   MLALRKLSTLKS-------SRFLSSLAIQNPICSSLTILDVPSCTNYDERINKAGREGDF 53

Query: 171 EALHHLLNKRAKDGCFNTRKTFKFITEVEQEELDPIPYLIQTLSGLESGFTRKNAFD 1
             +H LLNKRA+DG FNT  TFKFI       LD    L++ ++ L++GF RK+++D
Sbjct: 54  TTVHQLLNKRARDGFFNTNNTFKFIYTTNVSILDD---LLEIIARLDNGFPRKSSYD 107


>ref|XP_002311557.2| pentatricopeptide repeat-containing family protein [Populus
           trichocarpa] gi|550333038|gb|EEE88924.2|
           pentatricopeptide repeat-containing family protein
           [Populus trichocarpa]
          Length = 216

 Score = 77.8 bits (190), Expect = 2e-12
 Identities = 39/81 (48%), Positives = 54/81 (66%)
 Frame = -1

Query: 243 SYEEVPTSASYDELVSVAGRSRDYEALHHLLNKRAKDGCFNTRKTFKFITEVEQEELDPI 64
           ++  +PTSA YD+L + A   R++  L +LLNKR +D CFNT  T KFIT   +  L  +
Sbjct: 30  TFPNLPTSAYYDDLSNTARHKRNFSKLRYLLNKRVRDHCFNTTSTLKFIT-TSETSLSIL 88

Query: 63  PYLIQTLSGLESGFTRKNAFD 1
             LIQTL+ L++GF RK+AFD
Sbjct: 89  ADLIQTLARLDNGFPRKSAFD 109


>gb|EYU43433.1| hypothetical protein MIMGU_mgv1a021376mg [Mimulus guttatus]
          Length = 322

 Score = 67.4 bits (163), Expect = 3e-09
 Identities = 30/78 (38%), Positives = 50/78 (64%)
 Frame = -1

Query: 234 EVPTSASYDELVSVAGRSRDYEALHHLLNKRAKDGCFNTRKTFKFITEVEQEELDPIPYL 55
           ++P+SA YD+L++ AG+  D+ ++ HLL+KR   GC NT KTFKFI      ++  +  L
Sbjct: 27  QIPSSAHYDDLINAAGKQGDFASVRHLLSKRLSQGCLNTNKTFKFIA----TDVSVLDDL 82

Query: 54  IQTLSGLESGFTRKNAFD 1
           +  L+ ++  F +K+A D
Sbjct: 83  LLNLAAIDDWFVKKHAHD 100


>ref|XP_004512635.1| PREDICTED: pentatricopeptide repeat-containing protein At2g40240,
           mitochondrial-like [Cicer arietinum]
          Length = 336

 Score = 67.4 bits (163), Expect = 3e-09
 Identities = 38/97 (39%), Positives = 57/97 (58%), Gaps = 2/97 (2%)
 Frame = -1

Query: 285 FSSETTIN--ETHHHQSYEEVPTSASYDELVSVAGRSRDYEALHHLLNKRAKDGCFNTRK 112
           F+S +T+    T   + + + PT+  YD + +    S D+++L  LLNKR +DG FNT++
Sbjct: 12  FNSLSTLRGFTTLTSKPFPDNPTATYYDNVAADVANSGDFDSLRDLLNKRIQDGFFNTKR 71

Query: 111 TFKFITEVEQEELDPIPYLIQTLSGLESGFTRKNAFD 1
           TF FIT         +  ++ TLS L  GFTR+NAFD
Sbjct: 72  TFSFITNTNFSP-SFLNDVVTTLSHLNPGFTRRNAFD 107


>ref|XP_004515109.1| PREDICTED: pentatricopeptide repeat-containing protein At2g40240,
           mitochondrial-like isoform X1 [Cicer arietinum]
           gi|502171829|ref|XP_004515110.1| PREDICTED:
           pentatricopeptide repeat-containing protein At2g40240,
           mitochondrial-like isoform X2 [Cicer arietinum]
           gi|502171834|ref|XP_004515111.1| PREDICTED:
           pentatricopeptide repeat-containing protein At2g40240,
           mitochondrial-like isoform X3 [Cicer arietinum]
          Length = 334

 Score = 66.6 bits (161), Expect = 5e-09
 Identities = 34/80 (42%), Positives = 49/80 (61%)
 Frame = -1

Query: 240 YEEVPTSASYDELVSVAGRSRDYEALHHLLNKRAKDGCFNTRKTFKFITEVEQEELDPIP 61
           + + PT+  YD L +    S ++++L  LLNKR +DG FNT++TF FIT         + 
Sbjct: 28  FPDNPTATYYDNLAADVANSGEFDSLRDLLNKRIQDGFFNTKRTFSFITNTNFSP-SFLN 86

Query: 60  YLIQTLSGLESGFTRKNAFD 1
            ++ TLS L  GFTR+NAFD
Sbjct: 87  DVVTTLSHLNPGFTRRNAFD 106


>ref|XP_007152460.1| hypothetical protein PHAVU_004G132400g [Phaseolus vulgaris]
           gi|561025769|gb|ESW24454.1| hypothetical protein
           PHAVU_004G132400g [Phaseolus vulgaris]
          Length = 343

 Score = 65.9 bits (159), Expect = 8e-09
 Identities = 41/107 (38%), Positives = 57/107 (53%)
 Frame = -1

Query: 321 KSPPLLSAISRLFSSETTINETHHHQSYEEVPTSASYDELVSVAGRSRDYEALHHLLNKR 142
           K+P +     RL  S TT+      + + + PT A YD+L + A  S DY AL  +LNKR
Sbjct: 6   KTPNITLKSLRLLRSATTLTA----KPFPDDPTGAYYDDLANEAASSGDYSALRDVLNKR 61

Query: 141 AKDGCFNTRKTFKFITEVEQEELDPIPYLIQTLSGLESGFTRKNAFD 1
            +DG  N+++TF FIT         I  L + LS L  G TR+NA +
Sbjct: 62  IQDGFLNSKRTFSFITHSNCSP-SLIDKLEENLSHLNEGLTRENALN 107


>ref|XP_003619716.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355494731|gb|AES75934.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 333

 Score = 65.9 bits (159), Expect = 8e-09
 Identities = 40/79 (50%), Positives = 48/79 (60%), Gaps = 3/79 (3%)
 Frame = -1

Query: 228 PTSA-SYDELVSVAGRSRDYEALHHLLNKRAKDGCFNTRKTFKFITEVEQEELDP--IPY 58
           PTSA SYD L +    S D+ +LH +LNKR + G FNT+ TF FIT        P  +  
Sbjct: 29  PTSATSYDTLAANFATSGDFTSLHSILNKRIQHGFFNTKHTFNFIT---NSNFTPSLLQN 85

Query: 57  LIQTLSGLESGFTRKNAFD 1
           LI TLS L  GFTR+NAFD
Sbjct: 86  LITTLSRLNPGFTRRNAFD 104


>ref|XP_003533266.1| PREDICTED: pentatricopeptide repeat-containing protein At2g40240,
           mitochondrial-like [Glycine max]
          Length = 332

 Score = 65.1 bits (157), Expect = 1e-08
 Identities = 35/80 (43%), Positives = 48/80 (60%)
 Frame = -1

Query: 240 YEEVPTSASYDELVSVAGRSRDYEALHHLLNKRAKDGCFNTRKTFKFITEVEQEELDPIP 61
           + + PT+A YD+L   AG S D+ AL  +LNKR +DG  NT+ TF F+ +        I 
Sbjct: 27  FPDDPTAAYYDQLAFAAGDSGDFHALRDVLNKRIQDGFLNTKITFNFLKDTNFSP-SVID 85

Query: 60  YLIQTLSGLESGFTRKNAFD 1
            L+QTLS L  G TR++A D
Sbjct: 86  NLVQTLSHLNQGATRRSALD 105


>ref|XP_006292480.1| hypothetical protein CARUB_v10018709mg [Capsella rubella]
           gi|482561187|gb|EOA25378.1| hypothetical protein
           CARUB_v10018709mg [Capsella rubella]
          Length = 336

 Score = 60.1 bits (144), Expect = 4e-07
 Identities = 30/75 (40%), Positives = 46/75 (61%)
 Frame = -1

Query: 225 TSASYDELVSVAGRSRDYEALHHLLNKRAKDGCFNTRKTFKFITEVEQEELDPIPYLIQT 46
           T+A +D L+  AG S D+EA+  LLN R  + CFNT  TFKF+T  +      +  L + 
Sbjct: 41  TTAEFDNLIYEAGNSGDFEAVRRLLNTRVVNACFNTSATFKFLTNTD-SYAPSLEDLRRI 99

Query: 45  LSGLESGFTRKNAFD 1
           L   ++G+TRK+A++
Sbjct: 100 LPQTDAGYTRKHAYE 114


>ref|XP_002876347.1| hypothetical protein ARALYDRAFT_486042 [Arabidopsis lyrata subsp.
           lyrata] gi|297322185|gb|EFH52606.1| hypothetical protein
           ARALYDRAFT_486042 [Arabidopsis lyrata subsp. lyrata]
          Length = 334

 Score = 60.1 bits (144), Expect = 4e-07
 Identities = 30/75 (40%), Positives = 44/75 (58%)
 Frame = -1

Query: 225 TSASYDELVSVAGRSRDYEALHHLLNKRAKDGCFNTRKTFKFITEVEQEELDPIPYLIQT 46
           T   +D L+  AG S D+EA+  LLN R  + CFNT  TFKF+T  +      +  L + 
Sbjct: 41  TCVEFDNLIYEAGNSGDFEAVRRLLNSRVVNACFNTTATFKFLTNTDSYS-SSLEDLRRI 99

Query: 45  LSGLESGFTRKNAFD 1
           L   E+G+TRK+A++
Sbjct: 100 LPQTEAGYTRKHAYE 114


>ref|XP_006847430.1| hypothetical protein AMTR_s00153p00079500 [Amborella trichopoda]
           gi|548850596|gb|ERN09011.1| hypothetical protein
           AMTR_s00153p00079500 [Amborella trichopoda]
          Length = 396

 Score = 59.3 bits (142), Expect = 7e-07
 Identities = 43/107 (40%), Positives = 58/107 (54%), Gaps = 1/107 (0%)
 Frame = -1

Query: 318 SPPLLSAISRLFS-SETTINETHHHQSYEEVPTSASYDELVSVAGRSRDYEALHHLLNKR 142
           SP L ++IS L + S T +            PTSA YD LV +A RS    +L  LL +R
Sbjct: 72  SPALANSISALPNPSSTALPFFRWATVTAPKPTSALYDALVLLAVRSNHPASLVFLLVER 131

Query: 141 AKDGCFNTRKTFKFITEVEQEELDPIPYLIQTLSGLESGFTRKNAFD 1
            + GCFNT +TF+FI +     L     LIQT++ +  G  RKNAF+
Sbjct: 132 FRHGCFNTSETFQFINQNSPISLQT---LIQTIALITKGTARKNAFN 175