BLASTX nr result

ID: Cocculus22_contig00018333 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus22_contig00018333
         (450 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006854913.1| hypothetical protein AMTR_s00052p00087310 [A...    64   2e-08
ref|XP_002458146.1| hypothetical protein SORBIDRAFT_03g027640 [S...    56   4e-06

>ref|XP_006854913.1| hypothetical protein AMTR_s00052p00087310 [Amborella trichopoda]
           gi|548858638|gb|ERN16380.1| hypothetical protein
           AMTR_s00052p00087310 [Amborella trichopoda]
          Length = 142

 Score = 64.3 bits (155), Expect = 2e-08
 Identities = 34/75 (45%), Positives = 40/75 (53%)
 Frame = +2

Query: 2   PARQEPCNLRSCADFDDRDSTETVNRDGMSVWXXXXXXXXXXXXXXXXXXXXYTLYKRQT 181
           PARQEPCNL SC+D+   DS     +  MS W                    YTLYKR+ 
Sbjct: 69  PARQEPCNLESCSDYSIGDSNSGTPKR-MSPWAILLLIILFFVGIGGLGFAGYTLYKRRK 127

Query: 182 SSQQGFVYIMLEGYS 226
           +  +GFVYIMLEGYS
Sbjct: 128 NQSKGFVYIMLEGYS 142


>ref|XP_002458146.1| hypothetical protein SORBIDRAFT_03g027640 [Sorghum bicolor]
           gi|241930121|gb|EES03266.1| hypothetical protein
           SORBIDRAFT_03g027640 [Sorghum bicolor]
          Length = 265

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 31/77 (40%), Positives = 40/77 (51%), Gaps = 2/77 (2%)
 Frame = +2

Query: 2   PARQEPCNLRSCADFDDRDSTETVN--RDGMSVWXXXXXXXXXXXXXXXXXXXXYTLYKR 175
           PARQE CN +SC+D    + T++VN  + GMS W                    YT Y R
Sbjct: 192 PARQEACNQQSCSD---SEMTQSVNPKKSGMSGWLVALVVILGLSAAAGIAFTSYTYYVR 248

Query: 176 QTSSQQGFVYIMLEGYS 226
           +TS   GFVY+M+E YS
Sbjct: 249 RTSGTSGFVYVMMEAYS 265


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