BLASTX nr result
ID: Cocculus22_contig00018319
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus22_contig00018319
(905 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004958429.1| PREDICTED: serine/arginine-rich splicing fac... 72 3e-10
ref|XP_004958428.1| PREDICTED: serine/arginine-rich splicing fac... 72 3e-10
ref|XP_004229491.1| PREDICTED: uncharacterized protein LOC101246... 72 4e-10
ref|XP_006356992.1| PREDICTED: serine/arginine-rich splicing fac... 70 9e-10
ref|XP_006356991.1| PREDICTED: serine/arginine-rich splicing fac... 70 9e-10
gb|EAZ27018.1| hypothetical protein OsJ_10948 [Oryza sativa Japo... 69 2e-09
gb|EAY90113.1| hypothetical protein OsI_11679 [Oryza sativa Indi... 69 2e-09
gb|ABF96108.1| RNA recognition motif family protein, expressed [... 69 2e-09
ref|NP_001050168.1| Os03g0363800 [Oryza sativa Japonica Group] g... 69 2e-09
ref|XP_006380036.1| hypothetical protein POPTR_0008s20120g [Popu... 69 3e-09
ref|XP_007035427.1| SC35-like splicing factor 28 isoform 2 [Theo... 69 3e-09
ref|XP_007035426.1| SC35-like splicing factor 28 isoform 1 [Theo... 69 3e-09
gb|AEX99749.1| putative serine/arginine-rich protein SCL subfami... 69 3e-09
ref|XP_006857008.1| hypothetical protein AMTR_s00197p00027080 [A... 69 3e-09
gb|EPS63010.1| hypothetical protein M569_11776, partial [Genlise... 69 3e-09
ref|XP_002265951.1| PREDICTED: uncharacterized protein LOC100262... 69 3e-09
ref|XP_007227541.1| hypothetical protein PRUPE_ppa010343mg [Prun... 68 4e-09
ref|XP_007227540.1| hypothetical protein PRUPE_ppa010343mg [Prun... 68 4e-09
gb|AGE46130.1| arginine/serine-rich splicing factor SCL28 transc... 68 4e-09
gb|AGE46080.1| arginine/serine-rich splicing factor SCL28 transc... 68 4e-09
>ref|XP_004958429.1| PREDICTED: serine/arginine-rich splicing factor 33-like isoform X2
[Setaria italica]
Length = 197
Score = 72.0 bits (175), Expect = 3e-10
Identities = 51/117 (43%), Positives = 69/117 (58%), Gaps = 4/117 (3%)
Frame = -1
Query: 635 KAESPSPPRDGNAQRPLQLNWYKLFVKNIDFRAIRPKDLMMLFERHGQLSDFYLPHDY-- 462
+A SP+P RD N R L L V+N+ R RP+DL F + G++ D YLP DY
Sbjct: 18 RARSPTP-RDYNGDRGRDLPT-SLLVRNLR-RDCRPEDLRRPFAQFGRVKDIYLPRDYYT 74
Query: 461 -ERRGMAFVTFYKAEDAAFAKNSMLQERIGGRYLNIFFADDSKRKTRREMEAR-RVR 297
E RG FV FY EDAA AK M + + GR + + FA+++++K +EM AR RVR
Sbjct: 75 GEPRGFGFVQFYDPEDAADAKYYMDGQIVLGRQITVVFAEENRKKP-QEMRARDRVR 130
>ref|XP_004958428.1| PREDICTED: serine/arginine-rich splicing factor 33-like isoform X1
[Setaria italica]
Length = 207
Score = 72.0 bits (175), Expect = 3e-10
Identities = 51/117 (43%), Positives = 69/117 (58%), Gaps = 4/117 (3%)
Frame = -1
Query: 635 KAESPSPPRDGNAQRPLQLNWYKLFVKNIDFRAIRPKDLMMLFERHGQLSDFYLPHDY-- 462
+A SP+P RD N R L L V+N+ R RP+DL F + G++ D YLP DY
Sbjct: 18 RARSPTP-RDYNGDRGRDLPT-SLLVRNLR-RDCRPEDLRRPFAQFGRVKDIYLPRDYYT 74
Query: 461 -ERRGMAFVTFYKAEDAAFAKNSMLQERIGGRYLNIFFADDSKRKTRREMEAR-RVR 297
E RG FV FY EDAA AK M + + GR + + FA+++++K +EM AR RVR
Sbjct: 75 GEPRGFGFVQFYDPEDAADAKYYMDGQIVLGRQITVVFAEENRKKP-QEMRARDRVR 130
>ref|XP_004229491.1| PREDICTED: uncharacterized protein LOC101246661 [Solanum
lycopersicum]
Length = 267
Score = 71.6 bits (174), Expect = 4e-10
Identities = 45/87 (51%), Positives = 55/87 (63%), Gaps = 3/87 (3%)
Frame = -1
Query: 566 LFVKNIDFRAIRPKDLMMLFERHGQLSDFYLPHDY---ERRGMAFVTFYKAEDAAFAKNS 396
L V+NI A RP+DL + FER+G + D YLP +Y E RG FV F AEDAA AK
Sbjct: 41 LLVRNIPLSA-RPEDLRVPFERYGPIRDVYLPKNYHTGEPRGFGFVKFRYAEDAAEAKAH 99
Query: 395 MLQERIGGRYLNIFFADDSKRKTRREM 315
+ IGGR + I FA+D+ RKT REM
Sbjct: 100 LNNTVIGGRDIRIVFAEDN-RKTPREM 125
>ref|XP_006356992.1| PREDICTED: serine/arginine-rich splicing factor 33-like isoform X2
[Solanum tuberosum]
Length = 266
Score = 70.5 bits (171), Expect = 9e-10
Identities = 44/87 (50%), Positives = 55/87 (63%), Gaps = 3/87 (3%)
Frame = -1
Query: 566 LFVKNIDFRAIRPKDLMMLFERHGQLSDFYLPHDY---ERRGMAFVTFYKAEDAAFAKNS 396
L V+NI A RP+DL + FER+G + D YLP +Y E RG FV F AEDAA AK
Sbjct: 41 LLVRNIPLSA-RPEDLRVPFERYGPIRDVYLPKNYHTGEPRGFGFVKFRYAEDAAEAKAH 99
Query: 395 MLQERIGGRYLNIFFADDSKRKTRREM 315
+ IGGR + I FA+D+ RKT +EM
Sbjct: 100 LNNTVIGGRDIRIVFAEDN-RKTPKEM 125
>ref|XP_006356991.1| PREDICTED: serine/arginine-rich splicing factor 33-like isoform X1
[Solanum tuberosum]
Length = 271
Score = 70.5 bits (171), Expect = 9e-10
Identities = 44/87 (50%), Positives = 55/87 (63%), Gaps = 3/87 (3%)
Frame = -1
Query: 566 LFVKNIDFRAIRPKDLMMLFERHGQLSDFYLPHDY---ERRGMAFVTFYKAEDAAFAKNS 396
L V+NI A RP+DL + FER+G + D YLP +Y E RG FV F AEDAA AK
Sbjct: 41 LLVRNIPLSA-RPEDLRVPFERYGPIRDVYLPKNYHTGEPRGFGFVKFRYAEDAAEAKAH 99
Query: 395 MLQERIGGRYLNIFFADDSKRKTRREM 315
+ IGGR + I FA+D+ RKT +EM
Sbjct: 100 LNNTVIGGRDIRIVFAEDN-RKTPKEM 125
>gb|EAZ27018.1| hypothetical protein OsJ_10948 [Oryza sativa Japonica Group]
Length = 254
Score = 69.3 bits (168), Expect = 2e-09
Identities = 45/106 (42%), Positives = 60/106 (56%), Gaps = 3/106 (2%)
Frame = -1
Query: 614 PRDGNAQRPLQLNWYKLFVKNIDFRAIRPKDLMMLFERHGQLSDFYLP---HDYERRGMA 444
PR G + P L V+NI A RP+D+ + FE+ G + D YLP H E RG
Sbjct: 50 PRRGYGRPPAPTG---LLVRNISLTA-RPEDIRIPFEQFGPVKDVYLPRNFHTRELRGFG 105
Query: 443 FVTFYKAEDAAFAKNSMLQERIGGRYLNIFFADDSKRKTRREMEAR 306
FV F EDAA AK + + IGGR ++I FA+++ RKT +EM R
Sbjct: 106 FVKFRYPEDAAVAKQELNHQVIGGREISIVFAEEN-RKTPQEMRMR 150
>gb|EAY90113.1| hypothetical protein OsI_11679 [Oryza sativa Indica Group]
Length = 254
Score = 69.3 bits (168), Expect = 2e-09
Identities = 45/106 (42%), Positives = 60/106 (56%), Gaps = 3/106 (2%)
Frame = -1
Query: 614 PRDGNAQRPLQLNWYKLFVKNIDFRAIRPKDLMMLFERHGQLSDFYLP---HDYERRGMA 444
PR G + P L V+NI A RP+D+ + FE+ G + D YLP H E RG
Sbjct: 50 PRRGYGRPPAPTG---LLVRNISLTA-RPEDIRIPFEQFGPVKDVYLPRNFHTRELRGFG 105
Query: 443 FVTFYKAEDAAFAKNSMLQERIGGRYLNIFFADDSKRKTRREMEAR 306
FV F EDAA AK + + IGGR ++I FA+++ RKT +EM R
Sbjct: 106 FVKFRYPEDAAVAKQELNHQVIGGREISIVFAEEN-RKTPQEMRMR 150
>gb|ABF96108.1| RNA recognition motif family protein, expressed [Oryza sativa
Japonica Group]
Length = 238
Score = 69.3 bits (168), Expect = 2e-09
Identities = 45/106 (42%), Positives = 60/106 (56%), Gaps = 3/106 (2%)
Frame = -1
Query: 614 PRDGNAQRPLQLNWYKLFVKNIDFRAIRPKDLMMLFERHGQLSDFYLP---HDYERRGMA 444
PR G + P L V+NI A RP+D+ + FE+ G + D YLP H E RG
Sbjct: 50 PRRGYGRPPAPTG---LLVRNISLTA-RPEDIRIPFEQFGPVKDVYLPRNFHTRELRGFG 105
Query: 443 FVTFYKAEDAAFAKNSMLQERIGGRYLNIFFADDSKRKTRREMEAR 306
FV F EDAA AK + + IGGR ++I FA+++ RKT +EM R
Sbjct: 106 FVKFRYPEDAAVAKQELNHQVIGGREISIVFAEEN-RKTPQEMRMR 150
>ref|NP_001050168.1| Os03g0363800 [Oryza sativa Japonica Group]
gi|108708312|gb|ABF96107.1| RNA recognition motif family
protein, expressed [Oryza sativa Japonica Group]
gi|113548639|dbj|BAF12082.1| Os03g0363800 [Oryza sativa
Japonica Group] gi|215737124|dbj|BAG96053.1| unnamed
protein product [Oryza sativa Japonica Group]
Length = 243
Score = 69.3 bits (168), Expect = 2e-09
Identities = 45/106 (42%), Positives = 60/106 (56%), Gaps = 3/106 (2%)
Frame = -1
Query: 614 PRDGNAQRPLQLNWYKLFVKNIDFRAIRPKDLMMLFERHGQLSDFYLP---HDYERRGMA 444
PR G + P L V+NI A RP+D+ + FE+ G + D YLP H E RG
Sbjct: 50 PRRGYGRPPAPTG---LLVRNISLTA-RPEDIRIPFEQFGPVKDVYLPRNFHTRELRGFG 105
Query: 443 FVTFYKAEDAAFAKNSMLQERIGGRYLNIFFADDSKRKTRREMEAR 306
FV F EDAA AK + + IGGR ++I FA+++ RKT +EM R
Sbjct: 106 FVKFRYPEDAAVAKQELNHQVIGGREISIVFAEEN-RKTPQEMRMR 150
>ref|XP_006380036.1| hypothetical protein POPTR_0008s20120g [Populus trichocarpa]
gi|550333516|gb|ERP57833.1| hypothetical protein
POPTR_0008s20120g [Populus trichocarpa]
Length = 246
Score = 68.9 bits (167), Expect = 3e-09
Identities = 43/94 (45%), Positives = 57/94 (60%), Gaps = 3/94 (3%)
Frame = -1
Query: 566 LFVKNIDFRAIRPKDLMMLFERHGQLSDFYLPHDY---ERRGMAFVTFYKAEDAAFAKNS 396
L ++N+ A RP+DL FE+ G L D YLP +Y E RG FV + +EDAA AK
Sbjct: 50 LLIRNLPLDA-RPEDLRRSFEKFGPLKDIYLPKNYYTGEPRGFGFVKYRHSEDAAEAKQR 108
Query: 395 MLQERIGGRYLNIFFADDSKRKTRREMEARRVRH 294
M + IGGR + I FA+++ RKT +EM RR H
Sbjct: 109 MDHKTIGGREIRIVFAEEN-RKTPQEM--RRTTH 139
>ref|XP_007035427.1| SC35-like splicing factor 28 isoform 2 [Theobroma cacao]
gi|508714456|gb|EOY06353.1| SC35-like splicing factor 28
isoform 2 [Theobroma cacao]
Length = 291
Score = 68.9 bits (167), Expect = 3e-09
Identities = 41/87 (47%), Positives = 55/87 (63%), Gaps = 3/87 (3%)
Frame = -1
Query: 566 LFVKNIDFRAIRPKDLMMLFERHGQLSDFYLPHDY---ERRGMAFVTFYKAEDAAFAKNS 396
L ++N+ A RP+DL + FER+G + D YLP +Y E RG FV F EDAA AK
Sbjct: 49 LLIRNLPLDA-RPEDLRVPFERYGPVKDVYLPKNYYTGEPRGFGFVKFRYGEDAAEAKQR 107
Query: 395 MLQERIGGRYLNIFFADDSKRKTRREM 315
M + IGGR + I FA+++ RKT +EM
Sbjct: 108 MNHQVIGGREIRIVFAEEN-RKTPQEM 133
>ref|XP_007035426.1| SC35-like splicing factor 28 isoform 1 [Theobroma cacao]
gi|508714455|gb|EOY06352.1| SC35-like splicing factor 28
isoform 1 [Theobroma cacao]
Length = 308
Score = 68.9 bits (167), Expect = 3e-09
Identities = 41/87 (47%), Positives = 55/87 (63%), Gaps = 3/87 (3%)
Frame = -1
Query: 566 LFVKNIDFRAIRPKDLMMLFERHGQLSDFYLPHDY---ERRGMAFVTFYKAEDAAFAKNS 396
L ++N+ A RP+DL + FER+G + D YLP +Y E RG FV F EDAA AK
Sbjct: 49 LLIRNLPLDA-RPEDLRVPFERYGPVKDVYLPKNYYTGEPRGFGFVKFRYGEDAAEAKQR 107
Query: 395 MLQERIGGRYLNIFFADDSKRKTRREM 315
M + IGGR + I FA+++ RKT +EM
Sbjct: 108 MNHQVIGGREIRIVFAEEN-RKTPQEM 133
>gb|AEX99749.1| putative serine/arginine-rich protein SCL subfamily member
[Saccharum hybrid cultivar]
Length = 209
Score = 68.9 bits (167), Expect = 3e-09
Identities = 49/125 (39%), Positives = 71/125 (56%), Gaps = 15/125 (12%)
Frame = -1
Query: 626 SPSPPRD--GNAQRPLQLNWY---------KLFVKNIDFRAIRPKDLMMLFERHGQLSDF 480
SPSPPR + + P ++Y L V+N+ R RP+DL F + G+L D
Sbjct: 8 SPSPPRGYRRSERSPSPRDYYGGRGRDLPTSLLVRNLR-RDCRPEDLRRPFGQFGRLKDI 66
Query: 479 YLPHDY---ERRGMAFVTFYKAEDAAFAKNSMLQERIGGRYLNIFFADDSKRKTRREMEA 309
YLP DY E RG FV +Y+ +DAA AK M + + GR + + FA+++++K +EM A
Sbjct: 67 YLPRDYYTGEPRGFGFVQYYEPDDAADAKYYMDGQVVLGRQITVVFAEENRKKP-QEMRA 125
Query: 308 R-RVR 297
R RVR
Sbjct: 126 RDRVR 130
>ref|XP_006857008.1| hypothetical protein AMTR_s00197p00027080 [Amborella trichopoda]
gi|548861084|gb|ERN18475.1| hypothetical protein
AMTR_s00197p00027080 [Amborella trichopoda]
Length = 183
Score = 68.6 bits (166), Expect = 3e-09
Identities = 41/87 (47%), Positives = 54/87 (62%), Gaps = 3/87 (3%)
Frame = -1
Query: 566 LFVKNIDFRAIRPKDLMMLFERHGQLSDFYLPHDY---ERRGMAFVTFYKAEDAAFAKNS 396
L ++NI A RP+DL + FER G + D YLP +Y E RG FV F +DAA AK
Sbjct: 69 LLIRNISLDA-RPEDLRIPFERFGPVKDVYLPKNYYTGEPRGFGFVKFRNPDDAAEAKQQ 127
Query: 395 MLQERIGGRYLNIFFADDSKRKTRREM 315
M + IGGR + I FA+++ RKT +EM
Sbjct: 128 MNHQIIGGREITIVFAEEN-RKTPQEM 153
>gb|EPS63010.1| hypothetical protein M569_11776, partial [Genlisea aurea]
Length = 228
Score = 68.6 bits (166), Expect = 3e-09
Identities = 45/92 (48%), Positives = 59/92 (64%), Gaps = 3/92 (3%)
Frame = -1
Query: 566 LFVKNIDFRAIRPKDLMMLFERHGQLSDFYLPHDY---ERRGMAFVTFYKAEDAAFAKNS 396
L V+NI A RP+DL + FER G + D YLP +Y E RG FV F +EDAA AK+
Sbjct: 39 LLVRNISLSA-RPEDLRIPFERFGPVKDVYLPKNYYTGEPRGFGFVKFRYSEDAADAKSH 97
Query: 395 MLQERIGGRYLNIFFADDSKRKTRREMEARRV 300
+ + IGGR + I FA+++ RKT +EM RRV
Sbjct: 98 LDRTVIGGREIRIVFAEEN-RKTPQEM--RRV 126
>ref|XP_002265951.1| PREDICTED: uncharacterized protein LOC100262434 [Vitis vinifera]
gi|298205010|emb|CBI34317.3| unnamed protein product
[Vitis vinifera]
Length = 287
Score = 68.6 bits (166), Expect = 3e-09
Identities = 43/87 (49%), Positives = 55/87 (63%), Gaps = 3/87 (3%)
Frame = -1
Query: 566 LFVKNIDFRAIRPKDLMMLFERHGQLSDFYLPHDY---ERRGMAFVTFYKAEDAAFAKNS 396
L V+NI A RP+DL + FER G + D YLP +Y E RG FV F AEDAA AK+
Sbjct: 46 LLVRNIALDA-RPEDLRVPFERFGPVKDVYLPKNYYTGEPRGFGFVKFRNAEDAAEAKHH 104
Query: 395 MLQERIGGRYLNIFFADDSKRKTRREM 315
+ IGGR + I FA+++ RKT +EM
Sbjct: 105 LNHSVIGGREIAIVFAEEN-RKTPQEM 130
>ref|XP_007227541.1| hypothetical protein PRUPE_ppa010343mg [Prunus persica]
gi|462424477|gb|EMJ28740.1| hypothetical protein
PRUPE_ppa010343mg [Prunus persica]
Length = 253
Score = 68.2 bits (165), Expect = 4e-09
Identities = 41/87 (47%), Positives = 55/87 (63%), Gaps = 3/87 (3%)
Frame = -1
Query: 566 LFVKNIDFRAIRPKDLMMLFERHGQLSDFYLPHDY---ERRGMAFVTFYKAEDAAFAKNS 396
L V+N+ A RP+DL + FER+G + D YLP +Y E RG FV + AEDAA AK
Sbjct: 52 LLVRNLPLDA-RPEDLRIPFERYGPVKDVYLPKNYYTGEPRGFGFVKYRYAEDAAEAKQQ 110
Query: 395 MLQERIGGRYLNIFFADDSKRKTRREM 315
+ IGGR + I FA+++ RKT +EM
Sbjct: 111 LNHSVIGGREIRIVFAEEN-RKTPQEM 136
>ref|XP_007227540.1| hypothetical protein PRUPE_ppa010343mg [Prunus persica]
gi|462424476|gb|EMJ28739.1| hypothetical protein
PRUPE_ppa010343mg [Prunus persica]
Length = 252
Score = 68.2 bits (165), Expect = 4e-09
Identities = 41/87 (47%), Positives = 55/87 (63%), Gaps = 3/87 (3%)
Frame = -1
Query: 566 LFVKNIDFRAIRPKDLMMLFERHGQLSDFYLPHDY---ERRGMAFVTFYKAEDAAFAKNS 396
L V+N+ A RP+DL + FER+G + D YLP +Y E RG FV + AEDAA AK
Sbjct: 52 LLVRNLPLDA-RPEDLRIPFERYGPVKDVYLPKNYYTGEPRGFGFVKYRYAEDAAEAKQQ 110
Query: 395 MLQERIGGRYLNIFFADDSKRKTRREM 315
+ IGGR + I FA+++ RKT +EM
Sbjct: 111 LNHSVIGGREIRIVFAEEN-RKTPQEM 136
>gb|AGE46130.1| arginine/serine-rich splicing factor SCL28 transcript I [Sorghum
bicolor]
Length = 241
Score = 68.2 bits (165), Expect = 4e-09
Identities = 40/90 (44%), Positives = 55/90 (61%), Gaps = 3/90 (3%)
Frame = -1
Query: 566 LFVKNIDFRAIRPKDLMMLFERHGQLSDFYLP---HDYERRGMAFVTFYKAEDAAFAKNS 396
L ++NI A RP+D+ + FE+ G + D YLP H E RG FV F EDAA AK
Sbjct: 59 LLIRNISLTA-RPEDIRVPFEQFGPIKDVYLPRNFHTRELRGFGFVKFRYPEDAAVAKQE 117
Query: 395 MLQERIGGRYLNIFFADDSKRKTRREMEAR 306
M + IGGR ++I +A+++ RKT +EM R
Sbjct: 118 MNHQVIGGREISIVYAEEN-RKTPQEMRRR 146
>gb|AGE46080.1| arginine/serine-rich splicing factor SCL28 transcript III [Zea
mays]
Length = 232
Score = 68.2 bits (165), Expect = 4e-09
Identities = 40/90 (44%), Positives = 54/90 (60%), Gaps = 3/90 (3%)
Frame = -1
Query: 566 LFVKNIDFRAIRPKDLMMLFERHGQLSDFYLP---HDYERRGMAFVTFYKAEDAAFAKNS 396
L ++NI A RP+D+ FE+ G + D YLP H E RG FV F EDAA AK
Sbjct: 59 LLIRNISLTA-RPEDIRATFEQFGPIKDVYLPRNFHTRELRGFGFVKFRYPEDAAVAKRE 117
Query: 395 MLQERIGGRYLNIFFADDSKRKTRREMEAR 306
M + IGGR ++I +A+++ RKT +EM R
Sbjct: 118 MHHQVIGGREISIVYAEEN-RKTPQEMRMR 146