BLASTX nr result

ID: Cocculus22_contig00018260 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus22_contig00018260
         (452 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264645.1| PREDICTED: 60S acidic ribosomal protein P2B ...    60   3e-07
ref|XP_004145795.1| PREDICTED: 60S acidic ribosomal protein P2B-...    59   7e-07
gb|EYU35434.1| hypothetical protein MIMGU_mgv1a016591mg [Mimulus...    58   2e-06
gb|ABA40434.1| 60s acidic ribosomal protein-like protein [Solanu...    56   4e-06
emb|CBI17057.3| unnamed protein product [Vitis vinifera]               56   4e-06
ref|XP_002266030.1| PREDICTED: 60S acidic ribosomal protein P2B ...    56   4e-06
ref|XP_002273733.1| PREDICTED: 60S acidic ribosomal protein P2B ...    56   6e-06
emb|CAN61098.1| hypothetical protein VITISV_026175 [Vitis vinifera]    56   6e-06
gb|AGE46033.1| 60S acidic ribosomal protein P2B [Elaeis guineensis]    55   1e-05

>ref|XP_002264645.1| PREDICTED: 60S acidic ribosomal protein P2B [Vitis vinifera]
           gi|296090429|emb|CBI40248.3| unnamed protein product
           [Vitis vinifera]
          Length = 115

 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 34/70 (48%), Positives = 37/70 (52%)
 Frame = +1

Query: 1   VKGKDITELVASGREKLASVPSGGGAPMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXS 180
           VKGKDITEL+ASGREKLASVPSGGG  +                               S
Sbjct: 46  VKGKDITELIASGREKLASVPSGGGVAVAAVAASGGGGGGGAAPAATEPKEEKVEEKEES 105

Query: 181 DEDVGFSLFD 210
           DED+GFSLFD
Sbjct: 106 DEDMGFSLFD 115


>ref|XP_004145795.1| PREDICTED: 60S acidic ribosomal protein P2B-like [Cucumis sativus]
           gi|449496272|ref|XP_004160090.1| PREDICTED: 60S acidic
           ribosomal protein P2B-like [Cucumis sativus]
          Length = 115

 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 34/70 (48%), Positives = 37/70 (52%)
 Frame = +1

Query: 1   VKGKDITELVASGREKLASVPSGGGAPMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXS 180
           VKGKDITEL+ASGREKLASVPSGGGA                                 S
Sbjct: 46  VKGKDITELIASGREKLASVPSGGGAIAVSAAAGGATGGGAAAAPAEQKKEEKVEEKEES 105

Query: 181 DEDVGFSLFD 210
           D+D+GFSLFD
Sbjct: 106 DDDMGFSLFD 115


>gb|EYU35434.1| hypothetical protein MIMGU_mgv1a016591mg [Mimulus guttatus]
           gi|604330397|gb|EYU35435.1| hypothetical protein
           MIMGU_mgv1a016591mg [Mimulus guttatus]
          Length = 115

 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 32/70 (45%), Positives = 37/70 (52%)
 Frame = +1

Query: 1   VKGKDITELVASGREKLASVPSGGGAPMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXS 180
           +KGKDITEL+ASGREKLASVP+GGGA                                 S
Sbjct: 46  IKGKDITELIASGREKLASVPAGGGAVAVSAPVGGGGGGAAPAAAAETKKEEKVEEKEES 105

Query: 181 DEDVGFSLFD 210
           D+D+GFSLFD
Sbjct: 106 DDDMGFSLFD 115


>gb|ABA40434.1| 60s acidic ribosomal protein-like protein [Solanum tuberosum]
          Length = 115

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 31/70 (44%), Positives = 37/70 (52%)
 Frame = +1

Query: 1   VKGKDITELVASGREKLASVPSGGGAPMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXS 180
           VKGKDITEL+A+GREKLASVP+GGG  +                               S
Sbjct: 46  VKGKDITELIAAGREKLASVPAGGGGGVAVAVSGGGGGGAAAPAAEEKKVEKKVEEKEES 105

Query: 181 DEDVGFSLFD 210
           D+D+GFSLFD
Sbjct: 106 DDDMGFSLFD 115


>emb|CBI17057.3| unnamed protein product [Vitis vinifera]
          Length = 145

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 34/70 (48%), Positives = 38/70 (54%)
 Frame = +1

Query: 1   VKGKDITELVASGREKLASVPSGGGAPMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXS 180
           VKGKDITEL+ASGREKLASVPSGGGA +                               S
Sbjct: 78  VKGKDITELIASGREKLASVPSGGGAAV--AVAAPGGGGAAAPAAAEPKKEEKVEEKEES 135

Query: 181 DEDVGFSLFD 210
           D+D+GFSLFD
Sbjct: 136 DDDMGFSLFD 145


>ref|XP_002266030.1| PREDICTED: 60S acidic ribosomal protein P2B isoform 1 [Vitis
           vinifera] gi|147767214|emb|CAN73396.1| hypothetical
           protein VITISV_003816 [Vitis vinifera]
           gi|147782772|emb|CAN65595.1| hypothetical protein
           VITISV_030546 [Vitis vinifera]
          Length = 113

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 34/70 (48%), Positives = 38/70 (54%)
 Frame = +1

Query: 1   VKGKDITELVASGREKLASVPSGGGAPMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXS 180
           VKGKDITEL+ASGREKLASVPSGGGA +                               S
Sbjct: 46  VKGKDITELIASGREKLASVPSGGGAAV--AVAAPGGGGAAAPAAAEPKKEEKVEEKEES 103

Query: 181 DEDVGFSLFD 210
           D+D+GFSLFD
Sbjct: 104 DDDMGFSLFD 113


>ref|XP_002273733.1| PREDICTED: 60S acidic ribosomal protein P2B [Vitis vinifera]
           gi|296085335|emb|CBI29067.3| unnamed protein product
           [Vitis vinifera]
          Length = 113

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 34/70 (48%), Positives = 37/70 (52%)
 Frame = +1

Query: 1   VKGKDITELVASGREKLASVPSGGGAPMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXS 180
           VKGKDITEL+ASGREKLASVPSGGGA +                               S
Sbjct: 46  VKGKDITELIASGREKLASVPSGGGAAV--ATVAASDGGGAAPAATEPRKEKKVEEKEGS 103

Query: 181 DEDVGFSLFD 210
           DED+GF LFD
Sbjct: 104 DEDMGFGLFD 113


>emb|CAN61098.1| hypothetical protein VITISV_026175 [Vitis vinifera]
          Length = 113

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 35/70 (50%), Positives = 38/70 (54%)
 Frame = +1

Query: 1   VKGKDITELVASGREKLASVPSGGGAPMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXS 180
           VKGKDITEL+ASGREKLASVPSGGGA +                               S
Sbjct: 46  VKGKDITELIASGREKLASVPSGGGAAV--AXVAASDGGGAAPAATEPRKEKKVEEKEGS 103

Query: 181 DEDVGFSLFD 210
           DED+GF LFD
Sbjct: 104 DEDMGFGLFD 113


>gb|AGE46033.1| 60S acidic ribosomal protein P2B [Elaeis guineensis]
          Length = 112

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 34/70 (48%), Positives = 36/70 (51%)
 Frame = +1

Query: 1   VKGKDITELVASGREKLASVPSGGGAPMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXS 180
           VKGKDITEL+ASGREK ASVPSGGGA                                 S
Sbjct: 46  VKGKDITELIASGREKFASVPSGGGA---IAVAAPSAGGAAAAPADEPKKEEKVEEKEES 102

Query: 181 DEDVGFSLFD 210
           DED+GFSLFD
Sbjct: 103 DEDMGFSLFD 112


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