BLASTX nr result
ID: Cocculus22_contig00018201
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus22_contig00018201
(381 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006604318.1| PREDICTED: probable mediator of RNA polymera... 116 4e-24
ref|XP_006576774.1| PREDICTED: probable mediator of RNA polymera... 114 2e-23
ref|XP_006576772.1| PREDICTED: probable mediator of RNA polymera... 114 2e-23
ref|XP_003521115.1| PREDICTED: probable mediator of RNA polymera... 114 2e-23
ref|XP_002277659.2| PREDICTED: uncharacterized protein LOC100250... 113 2e-23
ref|XP_004172818.1| PREDICTED: probable mediator of RNA polymera... 112 5e-23
ref|XP_004136624.1| PREDICTED: probable mediator of RNA polymera... 112 5e-23
ref|XP_006482056.1| PREDICTED: probable mediator of RNA polymera... 112 7e-23
ref|XP_006430523.1| hypothetical protein CICLE_v10011717mg [Citr... 112 7e-23
ref|XP_004493377.1| PREDICTED: probable mediator of RNA polymera... 111 1e-22
ref|XP_004493376.1| PREDICTED: probable mediator of RNA polymera... 111 1e-22
ref|XP_004493371.1| PREDICTED: probable mediator of RNA polymera... 111 1e-22
ref|XP_007202053.1| hypothetical protein PRUPE_ppa005771mg [Prun... 109 5e-22
gb|EXB43778.1| hypothetical protein L484_004632 [Morus notabilis] 105 5e-21
ref|XP_002517284.1| conserved hypothetical protein [Ricinus comm... 105 7e-21
ref|XP_006575124.1| PREDICTED: probable mediator of RNA polymera... 104 1e-20
ref|XP_007028232.1| Transcription elongation factor family prote... 104 1e-20
ref|XP_004303850.1| PREDICTED: probable mediator of RNA polymera... 103 2e-20
ref|XP_007145438.1| hypothetical protein PHAVU_007G239100g [Phas... 103 3e-20
ref|XP_002308874.2| transcription elongation factor-related fami... 103 3e-20
>ref|XP_006604318.1| PREDICTED: probable mediator of RNA polymerase II transcription
subunit 26b-like isoform X1 [Glycine max]
gi|571556809|ref|XP_006604319.1| PREDICTED: probable
mediator of RNA polymerase II transcription subunit
26b-like isoform X2 [Glycine max]
Length = 458
Score = 116 bits (290), Expect = 4e-24
Identities = 52/67 (77%), Positives = 61/67 (91%)
Frame = -3
Query: 202 KSSVIDQWRKYFQSANTDIFEVIEHAIVVAASDCPNEFKIRRDRIAEKLFSCRLTRCVGC 23
KS +D+WRKYF SAN+DIFE+IEHAI+VAASDCP EF++RRD IAE+LFSCRLTRCVGC
Sbjct: 2 KSWSLDEWRKYFGSANSDIFEIIEHAIIVAASDCPKEFRVRRDGIAERLFSCRLTRCVGC 61
Query: 22 ERVELVV 2
+RVEL V
Sbjct: 62 DRVELAV 68
>ref|XP_006576774.1| PREDICTED: probable mediator of RNA polymerase II transcription
subunit 26b-like isoform X4 [Glycine max]
Length = 453
Score = 114 bits (284), Expect = 2e-23
Identities = 51/67 (76%), Positives = 60/67 (89%)
Frame = -3
Query: 202 KSSVIDQWRKYFQSANTDIFEVIEHAIVVAASDCPNEFKIRRDRIAEKLFSCRLTRCVGC 23
KS +D+WR YF SAN+DIFE+IEHAI+VAASDCP EF++RRD IAE+LFSCRLTRCVGC
Sbjct: 2 KSWSLDEWRNYFGSANSDIFEIIEHAIIVAASDCPKEFRVRRDWIAERLFSCRLTRCVGC 61
Query: 22 ERVELVV 2
+RVEL V
Sbjct: 62 DRVELAV 68
>ref|XP_006576772.1| PREDICTED: probable mediator of RNA polymerase II transcription
subunit 26b-like isoform X2 [Glycine max]
gi|571445333|ref|XP_006576773.1| PREDICTED: probable
mediator of RNA polymerase II transcription subunit
26b-like isoform X3 [Glycine max]
Length = 455
Score = 114 bits (284), Expect = 2e-23
Identities = 51/67 (76%), Positives = 60/67 (89%)
Frame = -3
Query: 202 KSSVIDQWRKYFQSANTDIFEVIEHAIVVAASDCPNEFKIRRDRIAEKLFSCRLTRCVGC 23
KS +D+WR YF SAN+DIFE+IEHAI+VAASDCP EF++RRD IAE+LFSCRLTRCVGC
Sbjct: 2 KSWSLDEWRNYFGSANSDIFEIIEHAIIVAASDCPKEFRVRRDWIAERLFSCRLTRCVGC 61
Query: 22 ERVELVV 2
+RVEL V
Sbjct: 62 DRVELAV 68
>ref|XP_003521115.1| PREDICTED: probable mediator of RNA polymerase II transcription
subunit 26b-like isoform X1 [Glycine max]
Length = 452
Score = 114 bits (284), Expect = 2e-23
Identities = 51/67 (76%), Positives = 60/67 (89%)
Frame = -3
Query: 202 KSSVIDQWRKYFQSANTDIFEVIEHAIVVAASDCPNEFKIRRDRIAEKLFSCRLTRCVGC 23
KS +D+WR YF SAN+DIFE+IEHAI+VAASDCP EF++RRD IAE+LFSCRLTRCVGC
Sbjct: 2 KSWSLDEWRNYFGSANSDIFEIIEHAIIVAASDCPKEFRVRRDWIAERLFSCRLTRCVGC 61
Query: 22 ERVELVV 2
+RVEL V
Sbjct: 62 DRVELAV 68
>ref|XP_002277659.2| PREDICTED: uncharacterized protein LOC100250012 [Vitis vinifera]
Length = 521
Score = 113 bits (283), Expect = 2e-23
Identities = 49/70 (70%), Positives = 61/70 (87%)
Frame = -3
Query: 211 MSAKSSVIDQWRKYFQSANTDIFEVIEHAIVVAASDCPNEFKIRRDRIAEKLFSCRLTRC 32
M+ S +DQWR YF++AN+DIF +IEHAI+VAASDCP EF++RRDRIAE+LFSC+LTRC
Sbjct: 1 MATNSGALDQWRNYFRTANSDIFGIIEHAILVAASDCPKEFRLRRDRIAERLFSCKLTRC 60
Query: 31 VGCERVELVV 2
GC+RVEL V
Sbjct: 61 FGCDRVELAV 70
>ref|XP_004172818.1| PREDICTED: probable mediator of RNA polymerase II transcription
subunit 26b-like, partial [Cucumis sativus]
Length = 207
Score = 112 bits (280), Expect = 5e-23
Identities = 49/70 (70%), Positives = 63/70 (90%)
Frame = -3
Query: 211 MSAKSSVIDQWRKYFQSANTDIFEVIEHAIVVAASDCPNEFKIRRDRIAEKLFSCRLTRC 32
M+AKS +D WR YF++AN+DIF +I++AI+VAASDCP EF++RRDRIAE+LFSCRLTRC
Sbjct: 1 MAAKSGSLDSWRNYFRNANSDIFGIIDYAILVAASDCPKEFRLRRDRIAEQLFSCRLTRC 60
Query: 31 VGCERVELVV 2
+GC+RVEL V
Sbjct: 61 LGCDRVELAV 70
>ref|XP_004136624.1| PREDICTED: probable mediator of RNA polymerase II transcription
subunit 26b-like [Cucumis sativus]
Length = 452
Score = 112 bits (280), Expect = 5e-23
Identities = 49/70 (70%), Positives = 63/70 (90%)
Frame = -3
Query: 211 MSAKSSVIDQWRKYFQSANTDIFEVIEHAIVVAASDCPNEFKIRRDRIAEKLFSCRLTRC 32
M+AKS +D WR YF++AN+DIF +I++AI+VAASDCP EF++RRDRIAE+LFSCRLTRC
Sbjct: 1 MAAKSGSLDSWRNYFRNANSDIFGIIDYAILVAASDCPKEFRLRRDRIAEQLFSCRLTRC 60
Query: 31 VGCERVELVV 2
+GC+RVEL V
Sbjct: 61 LGCDRVELAV 70
>ref|XP_006482056.1| PREDICTED: probable mediator of RNA polymerase II transcription
subunit 26b-like [Citrus sinensis]
Length = 448
Score = 112 bits (279), Expect = 7e-23
Identities = 49/70 (70%), Positives = 60/70 (85%)
Frame = -3
Query: 211 MSAKSSVIDQWRKYFQSANTDIFEVIEHAIVVAASDCPNEFKIRRDRIAEKLFSCRLTRC 32
MS KS +D WR YF+SAN DIF++I+HA++VAA DCP EFK+RRDRIAEKLF+C+LTRC
Sbjct: 1 MSMKSGSLDNWRNYFRSANGDIFDIIDHAVMVAALDCPKEFKLRRDRIAEKLFTCKLTRC 60
Query: 31 VGCERVELVV 2
GC+RVEL V
Sbjct: 61 SGCDRVELAV 70
>ref|XP_006430523.1| hypothetical protein CICLE_v10011717mg [Citrus clementina]
gi|557532580|gb|ESR43763.1| hypothetical protein
CICLE_v10011717mg [Citrus clementina]
Length = 448
Score = 112 bits (279), Expect = 7e-23
Identities = 49/70 (70%), Positives = 60/70 (85%)
Frame = -3
Query: 211 MSAKSSVIDQWRKYFQSANTDIFEVIEHAIVVAASDCPNEFKIRRDRIAEKLFSCRLTRC 32
MS KS +D WR YF+SAN DIF++I+HA++VAA DCP EFK+RRDRIAEKLF+C+LTRC
Sbjct: 1 MSMKSGSLDNWRNYFRSANGDIFDIIDHAVMVAALDCPKEFKLRRDRIAEKLFTCKLTRC 60
Query: 31 VGCERVELVV 2
GC+RVEL V
Sbjct: 61 SGCDRVELAV 70
>ref|XP_004493377.1| PREDICTED: probable mediator of RNA polymerase II transcription
subunit 26b-like isoform X7 [Cicer arietinum]
Length = 445
Score = 111 bits (277), Expect = 1e-22
Identities = 47/67 (70%), Positives = 62/67 (92%)
Frame = -3
Query: 202 KSSVIDQWRKYFQSANTDIFEVIEHAIVVAASDCPNEFKIRRDRIAEKLFSCRLTRCVGC 23
KS +DQWR YF+S+N+DIF++I++AIVVAASDCP EFK+RRD+IAE+LFSC+LTRC+GC
Sbjct: 2 KSGSLDQWRNYFRSSNSDIFDIIDYAIVVAASDCPKEFKLRRDKIAERLFSCKLTRCLGC 61
Query: 22 ERVELVV 2
++VEL V
Sbjct: 62 DKVELAV 68
>ref|XP_004493376.1| PREDICTED: probable mediator of RNA polymerase II transcription
subunit 26b-like isoform X6 [Cicer arietinum]
Length = 441
Score = 111 bits (277), Expect = 1e-22
Identities = 47/67 (70%), Positives = 62/67 (92%)
Frame = -3
Query: 202 KSSVIDQWRKYFQSANTDIFEVIEHAIVVAASDCPNEFKIRRDRIAEKLFSCRLTRCVGC 23
KS +DQWR YF+S+N+DIF++I++AIVVAASDCP EFK+RRD+IAE+LFSC+LTRC+GC
Sbjct: 2 KSGSLDQWRNYFRSSNSDIFDIIDYAIVVAASDCPKEFKLRRDKIAERLFSCKLTRCLGC 61
Query: 22 ERVELVV 2
++VEL V
Sbjct: 62 DKVELAV 68
>ref|XP_004493371.1| PREDICTED: probable mediator of RNA polymerase II transcription
subunit 26b-like isoform X1 [Cicer arietinum]
gi|502108027|ref|XP_004493372.1| PREDICTED: probable
mediator of RNA polymerase II transcription subunit
26b-like isoform X2 [Cicer arietinum]
gi|502108031|ref|XP_004493373.1| PREDICTED: probable
mediator of RNA polymerase II transcription subunit
26b-like isoform X3 [Cicer arietinum]
gi|502108035|ref|XP_004493374.1| PREDICTED: probable
mediator of RNA polymerase II transcription subunit
26b-like isoform X4 [Cicer arietinum]
gi|502108039|ref|XP_004493375.1| PREDICTED: probable
mediator of RNA polymerase II transcription subunit
26b-like isoform X5 [Cicer arietinum]
Length = 451
Score = 111 bits (277), Expect = 1e-22
Identities = 47/67 (70%), Positives = 62/67 (92%)
Frame = -3
Query: 202 KSSVIDQWRKYFQSANTDIFEVIEHAIVVAASDCPNEFKIRRDRIAEKLFSCRLTRCVGC 23
KS +DQWR YF+S+N+DIF++I++AIVVAASDCP EFK+RRD+IAE+LFSC+LTRC+GC
Sbjct: 2 KSGSLDQWRNYFRSSNSDIFDIIDYAIVVAASDCPKEFKLRRDKIAERLFSCKLTRCLGC 61
Query: 22 ERVELVV 2
++VEL V
Sbjct: 62 DKVELAV 68
>ref|XP_007202053.1| hypothetical protein PRUPE_ppa005771mg [Prunus persica]
gi|462397584|gb|EMJ03252.1| hypothetical protein
PRUPE_ppa005771mg [Prunus persica]
Length = 444
Score = 109 bits (272), Expect = 5e-22
Identities = 46/70 (65%), Positives = 62/70 (88%)
Frame = -3
Query: 211 MSAKSSVIDQWRKYFQSANTDIFEVIEHAIVVAASDCPNEFKIRRDRIAEKLFSCRLTRC 32
M+ K+ ++ WR YF++AN+DIF++I+HAI+VAASDCP EFK+RRDRIAE+LFSCRLTRC
Sbjct: 1 MATKTGSLNYWRNYFRTANSDIFDIIDHAIMVAASDCPKEFKLRRDRIAERLFSCRLTRC 60
Query: 31 VGCERVELVV 2
GC+++EL V
Sbjct: 61 SGCDKMELAV 70
>gb|EXB43778.1| hypothetical protein L484_004632 [Morus notabilis]
Length = 464
Score = 105 bits (263), Expect = 5e-21
Identities = 48/70 (68%), Positives = 59/70 (84%)
Frame = -3
Query: 211 MSAKSSVIDQWRKYFQSANTDIFEVIEHAIVVAASDCPNEFKIRRDRIAEKLFSCRLTRC 32
M+ KS +D WR YF++AN+ IFE+I+HAI+VAASD P EF++RRDRIAEKLFSCRL +C
Sbjct: 1 MAKKSGSLDYWRSYFRTANSSIFEIIDHAIMVAASDRPKEFRLRRDRIAEKLFSCRLRKC 60
Query: 31 VGCERVELVV 2
GCERVEL V
Sbjct: 61 CGCERVELSV 70
>ref|XP_002517284.1| conserved hypothetical protein [Ricinus communis]
gi|223543547|gb|EEF45077.1| conserved hypothetical
protein [Ricinus communis]
Length = 473
Score = 105 bits (262), Expect = 7e-21
Identities = 46/67 (68%), Positives = 57/67 (85%)
Frame = -3
Query: 202 KSSVIDQWRKYFQSANTDIFEVIEHAIVVAASDCPNEFKIRRDRIAEKLFSCRLTRCVGC 23
KS +D WR YF++AN+DIF +I+HAI+VAASDCP EF++RRDRIAE+LFSCRLTRC GC
Sbjct: 2 KSVSLDYWRNYFRTANSDIFAIIDHAIMVAASDCPKEFRLRRDRIAERLFSCRLTRCSGC 61
Query: 22 ERVELVV 2
V+L V
Sbjct: 62 NHVDLAV 68
>ref|XP_006575124.1| PREDICTED: probable mediator of RNA polymerase II transcription
subunit 26b-like isoform X1 [Glycine max]
gi|571440343|ref|XP_006575125.1| PREDICTED: probable
mediator of RNA polymerase II transcription subunit
26b-like isoform X2 [Glycine max]
Length = 453
Score = 104 bits (259), Expect = 1e-20
Identities = 46/70 (65%), Positives = 57/70 (81%)
Frame = -3
Query: 211 MSAKSSVIDQWRKYFQSANTDIFEVIEHAIVVAASDCPNEFKIRRDRIAEKLFSCRLTRC 32
M +D WR YF +AN+DIF +I+HAI+VAASDCP EF++RRD IAE+LFSCRL+RC
Sbjct: 1 MRMNKGSLDYWRNYFGAANSDIFGIIDHAIMVAASDCPKEFRLRRDGIAERLFSCRLSRC 60
Query: 31 VGCERVELVV 2
+GCERVEL V
Sbjct: 61 LGCERVELAV 70
>ref|XP_007028232.1| Transcription elongation factor family protein, putative isoform 1
[Theobroma cacao] gi|508716837|gb|EOY08734.1|
Transcription elongation factor family protein, putative
isoform 1 [Theobroma cacao]
Length = 464
Score = 104 bits (259), Expect = 1e-20
Identities = 44/70 (62%), Positives = 60/70 (85%)
Frame = -3
Query: 211 MSAKSSVIDQWRKYFQSANTDIFEVIEHAIVVAASDCPNEFKIRRDRIAEKLFSCRLTRC 32
M+ K ++QWR YF++AN+DIF++I+HAI VAA DCP EF++RRD+IAEKLF+C+ TRC
Sbjct: 1 MAMKGVPLEQWRDYFRTANSDIFDIIDHAITVAALDCPKEFRLRRDQIAEKLFTCKFTRC 60
Query: 31 VGCERVELVV 2
GC+RV+LVV
Sbjct: 61 SGCDRVKLVV 70
>ref|XP_004303850.1| PREDICTED: probable mediator of RNA polymerase II transcription
subunit 26b-like [Fragaria vesca subsp. vesca]
Length = 458
Score = 103 bits (258), Expect = 2e-20
Identities = 45/69 (65%), Positives = 59/69 (85%)
Frame = -3
Query: 208 SAKSSVIDQWRKYFQSANTDIFEVIEHAIVVAASDCPNEFKIRRDRIAEKLFSCRLTRCV 29
S SS ++ WR YF++AN+DIF +I+HAI+VAA DCP EF++RRDR+AE LFSCR++RC
Sbjct: 8 SGSSSSLNYWRSYFRTANSDIFGIIDHAIMVAAVDCPKEFRLRRDRVAELLFSCRMSRCS 67
Query: 28 GCERVELVV 2
GCE+VELVV
Sbjct: 68 GCEKVELVV 76
>ref|XP_007145438.1| hypothetical protein PHAVU_007G239100g [Phaseolus vulgaris]
gi|561018628|gb|ESW17432.1| hypothetical protein
PHAVU_007G239100g [Phaseolus vulgaris]
Length = 457
Score = 103 bits (257), Expect = 3e-20
Identities = 45/63 (71%), Positives = 56/63 (88%)
Frame = -3
Query: 190 IDQWRKYFQSANTDIFEVIEHAIVVAASDCPNEFKIRRDRIAEKLFSCRLTRCVGCERVE 11
+D WR YF +AN+DIF +I+HAI+VAASDCP EF++RRD IAE+LFSCRL+RC+GCERVE
Sbjct: 9 LDYWRNYFGAANSDIFGIIDHAIMVAASDCPEEFRMRRDGIAERLFSCRLSRCLGCERVE 68
Query: 10 LVV 2
L V
Sbjct: 69 LAV 71
>ref|XP_002308874.2| transcription elongation factor-related family protein [Populus
trichocarpa] gi|550335369|gb|EEE92397.2| transcription
elongation factor-related family protein [Populus
trichocarpa]
Length = 483
Score = 103 bits (256), Expect = 3e-20
Identities = 46/67 (68%), Positives = 56/67 (83%)
Frame = -3
Query: 202 KSSVIDQWRKYFQSANTDIFEVIEHAIVVAASDCPNEFKIRRDRIAEKLFSCRLTRCVGC 23
KS +D WR YF++A++DIF +I+HAI+VAASDCP EFK RRDRIAE+LFSCRL +C GC
Sbjct: 2 KSVSLDYWRNYFRTASSDIFGIIDHAILVAASDCPKEFKFRRDRIAERLFSCRLIKCSGC 61
Query: 22 ERVELVV 2
RVEL V
Sbjct: 62 NRVELAV 68